assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007990575.1_ASM799057v1	NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	1	618726-618901	1	PILER-CR	no	cas13a	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	Type VI-A	ATATGTTTTAGTCCCCTTCATTTTTGGGGTACTCTAAATC	40	0	0	NA	NA	NA	2	2	TypeVI-A	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	NA|120aa|up_6|NZ_AP019845.1_609227_609587_-,NA|1037aa|up_3|NZ_AP019845.1_613894_617005_-,cas13a|1169aa|down_0|NZ_AP019845.1_619156_622663_-	NA|123aa|up_9|NZ_AP019845.1_607158_607527_-	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|247aa|up_8|NZ_AP019845.1_607632_608373_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|212aa|up_7|NZ_AP019845.1_608513_609149_-	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases	NA|120aa|up_6|NZ_AP019845.1_609227_609587_-	NA	NA|307aa|up_5|NZ_AP019845.1_609615_610536_-	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional	NA|1094aa|up_4|NZ_AP019845.1_610629_613911_-	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|1037aa|up_3|NZ_AP019845.1_613894_617005_-	NA	NA|182aa|up_2|NZ_AP019845.1_617269_617815_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|142aa|up_1|NZ_AP019845.1_617811_618237_+	pfam04986, Y2_Tnp, Putative transposase	NA|77aa|up_0|NZ_AP019845.1_618203_618434_+	pfam04986, Y2_Tnp, Putative transposase	cas13a|1169aa|down_0|NZ_AP019845.1_619156_622663_-	NA	NA|139aa|down_1|NZ_AP019845.1_622692_623109_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|61aa|down_2|NZ_AP019845.1_623470_623653_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|69aa|down_3|NZ_AP019845.1_623893_624100_-	pfam03840, SecG, Preprotein translocase SecG subunit	NA|256aa|down_4|NZ_AP019845.1_624163_624931_-	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|137aa|down_5|NZ_AP019845.1_625113_625524_+	pfam09685, DUF4870, Domain of unknown function (DUF4870)	NA|65aa|down_6|NZ_AP019845.1_626244_626439_-	PRK14861, tatA, twin arginine translocase protein A; Provisional	NA|238aa|down_7|NZ_AP019845.1_626441_627155_-	COG0805, TatC, Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]	NA|564aa|down_8|NZ_AP019845.1_627191_628883_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|413aa|down_9|NZ_AP019845.1_628860_630099_-	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme
GCF_007990575.1_ASM799057v1	NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	2	623331-623424	1	CRISPRCasFinder	no	cas13a	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	Type VI-A	CCTTCATTTTTGGGGTGCTCTAAATC	26	0	0	NA	NA	NA	1	1	TypeVI-A	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	NA|120aa|up_8|NZ_AP019845.1_609227_609587_-,NA|1037aa|up_5|NZ_AP019845.1_613894_617005_-,cas13a|1169aa|up_1|NZ_AP019845.1_619156_622663_-,NA	NA|212aa|up_9|NZ_AP019845.1_608513_609149_-	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases	NA|120aa|up_8|NZ_AP019845.1_609227_609587_-	NA	NA|307aa|up_7|NZ_AP019845.1_609615_610536_-	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional	NA|1094aa|up_6|NZ_AP019845.1_610629_613911_-	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|1037aa|up_5|NZ_AP019845.1_613894_617005_-	NA	NA|182aa|up_4|NZ_AP019845.1_617269_617815_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|142aa|up_3|NZ_AP019845.1_617811_618237_+	pfam04986, Y2_Tnp, Putative transposase	NA|77aa|up_2|NZ_AP019845.1_618203_618434_+	pfam04986, Y2_Tnp, Putative transposase	cas13a|1169aa|up_1|NZ_AP019845.1_619156_622663_-	NA	NA|139aa|up_0|NZ_AP019845.1_622692_623109_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|61aa|down_0|NZ_AP019845.1_623470_623653_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|69aa|down_1|NZ_AP019845.1_623893_624100_-	pfam03840, SecG, Preprotein translocase SecG subunit	NA|256aa|down_2|NZ_AP019845.1_624163_624931_-	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|137aa|down_3|NZ_AP019845.1_625113_625524_+	pfam09685, DUF4870, Domain of unknown function (DUF4870)	NA|65aa|down_4|NZ_AP019845.1_626244_626439_-	PRK14861, tatA, twin arginine translocase protein A; Provisional	NA|238aa|down_5|NZ_AP019845.1_626441_627155_-	COG0805, TatC, Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]	NA|564aa|down_6|NZ_AP019845.1_627191_628883_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|413aa|down_7|NZ_AP019845.1_628860_630099_-	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|294aa|down_8|NZ_AP019845.1_630225_631107_-	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon	NA|389aa|down_9|NZ_AP019845.1_631404_632571_-	pfam04986, Y2_Tnp, Putative transposase
GCF_007990575.1_ASM799057v1	NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	3	1100013-1101343	2,1,2	CRISPRCasFinder,CRT,PILER-CR	no	cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	Unclear	ATTTACAATACAAATTGTGCTATTAAAAT,ATTTACAATACAAATTGTGCTATTAAAAT,ATTTACAATACAAATTGTGCTATTAAAAT	29,29,29	0	0	NA	NA	NA:NA:NA	20,20,16	20	Unclear	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	NA|260aa|up_7|NZ_AP019845.1_1089145_1089925_-,NA|62aa|up_6|NZ_AP019845.1_1089952_1090138_-,NA|135aa|up_0|NZ_AP019845.1_1099351_1099756_-,NA	NA|497aa|up_9|NZ_AP019845.1_1086651_1088142_-	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional	NA|254aa|up_8|NZ_AP019845.1_1088372_1089134_-	pfam13308, YARHG, YARHG domain	NA|260aa|up_7|NZ_AP019845.1_1089145_1089925_-	NA	NA|62aa|up_6|NZ_AP019845.1_1089952_1090138_-	NA	NA|405aa|up_5|NZ_AP019845.1_1090774_1091989_+	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|347aa|up_4|NZ_AP019845.1_1092288_1093329_+	cd06354, PBP1_PrnA-like, periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea	NA|435aa|up_3|NZ_AP019845.1_1093479_1094784_+	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase	NA|515aa|up_2|NZ_AP019845.1_1094898_1096443_-	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]	NA|887aa|up_1|NZ_AP019845.1_1096632_1099293_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|135aa|up_0|NZ_AP019845.1_1099351_1099756_-	NA	cas6|261aa|down_0|NZ_AP019845.1_1101679_1102462_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b2|599aa|down_1|NZ_AP019845.1_1102486_1104283_+	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|299aa|down_2|NZ_AP019845.1_1104285_1105182_+	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas5|255aa|down_3|NZ_AP019845.1_1105184_1105949_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|796aa|down_4|NZ_AP019845.1_1105982_1108370_+	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas4|163aa|down_5|NZ_AP019845.1_1108388_1108877_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|331aa|down_6|NZ_AP019845.1_1108913_1109906_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|93aa|down_7|NZ_AP019845.1_1109907_1110186_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|243aa|down_8|NZ_AP019845.1_1111663_1112392_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|327aa|down_9|NZ_AP019845.1_1112495_1113476_+	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases
GCF_007990575.1_ASM799057v1	NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	4	1110391-1111506	3,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	Unclear	ATTTTAATAGCACAATTTGTATTGTAAAT,ATTTTAATAGCACAATTTGTATTNNGTAAAT,ATTTACAATACAAATTGTGCTATTAAAAT	29,31,29	0	0	NA	NA	NA:NA:NA	16,17,15	17	Unclear	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	NA|135aa|up_8|NZ_AP019845.1_1099351_1099756_-,NA|146aa|down_3|NZ_AP019845.1_1114375_1114813_+	NA|887aa|up_9|NZ_AP019845.1_1096632_1099293_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|135aa|up_8|NZ_AP019845.1_1099351_1099756_-	NA	cas6|261aa|up_7|NZ_AP019845.1_1101679_1102462_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b2|599aa|up_6|NZ_AP019845.1_1102486_1104283_+	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|299aa|up_5|NZ_AP019845.1_1104285_1105182_+	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas5|255aa|up_4|NZ_AP019845.1_1105184_1105949_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|796aa|up_3|NZ_AP019845.1_1105982_1108370_+	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas4|163aa|up_2|NZ_AP019845.1_1108388_1108877_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|331aa|up_1|NZ_AP019845.1_1108913_1109906_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|93aa|up_0|NZ_AP019845.1_1109907_1110186_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|243aa|down_0|NZ_AP019845.1_1111663_1112392_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|327aa|down_1|NZ_AP019845.1_1112495_1113476_+	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases	NA|215aa|down_2|NZ_AP019845.1_1113596_1114241_+	pfam08797, HIRAN, HIRAN domain	NA|146aa|down_3|NZ_AP019845.1_1114375_1114813_+	NA	NA|1047aa|down_4|NZ_AP019845.1_1115426_1118567_+	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|244aa|down_5|NZ_AP019845.1_1118667_1119399_+	pfam03591, AzlC, AzlC protein	NA|102aa|down_6|NZ_AP019845.1_1119460_1119766_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|116aa|down_7|NZ_AP019845.1_1119826_1120174_+	COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion]	NA|170aa|down_8|NZ_AP019845.1_1120190_1120700_-	pfam07273, DUF1439, Protein of unknown function (DUF1439)	NA|246aa|down_9|NZ_AP019845.1_1120978_1121716_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_007990575.1_ASM799057v1	NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	5	1297505-1297764	4,4,3	PILER-CR,CRISPRCasFinder,CRT	no	cas10,csx10gr5,csm3gr7,cas6	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	Type III-C,Type III-B,Type III-A,Type III-D	GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAAC,GTTAAAGTAAGTTATCCATTAAAACAAGG,GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAACA	37,29,38	0	0	NA	NA	I-B:I-B:I-B	3,3,3	3	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	NA|65aa|up_8|NZ_AP019845.1_1288460_1288655_+,NA|55aa|up_0|NZ_AP019845.1_1296998_1297163_+,NA	NA|244aa|up_9|NZ_AP019845.1_1287669_1288401_+	pfam03883, H2O2_YaaD, Peroxide stress protein YaaA	NA|65aa|up_8|NZ_AP019845.1_1288460_1288655_+	NA	NA|281aa|up_7|NZ_AP019845.1_1288723_1289566_-	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|233aa|up_6|NZ_AP019845.1_1289608_1290307_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|312aa|up_5|NZ_AP019845.1_1290357_1291293_-	cd01018, ZntC, Metal binding protein ZntC	NA|119aa|up_4|NZ_AP019845.1_1291333_1291690_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|531aa|up_3|NZ_AP019845.1_1291954_1293547_+	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional	NA|766aa|up_2|NZ_AP019845.1_1293672_1295970_+	pfam12138, Spherulin4, Spherulation-specific family 4	NA|298aa|up_1|NZ_AP019845.1_1296060_1296954_+	PRK01212, PRK01212, homoserine kinase; Provisional	NA|55aa|up_0|NZ_AP019845.1_1296998_1297163_+	NA	NA|163aa|down_0|NZ_AP019845.1_1297915_1298404_+	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|398aa|down_1|NZ_AP019845.1_1298403_1299597_+	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|174aa|down_2|NZ_AP019845.1_1299718_1300240_+	COG2740, COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination [Transcription]	NA|1026aa|down_3|NZ_AP019845.1_1300236_1303314_+	PRK05306, infB, translation initiation factor IF-2; Validated	NA|123aa|down_4|NZ_AP019845.1_1303336_1303705_+	pfam02033, RBFA, Ribosome-binding factor A	NA|566aa|down_5|NZ_AP019845.1_1303798_1305496_+	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|429aa|down_6|NZ_AP019845.1_1305553_1306840_+	PRK01490, tig, trigger factor; Provisional	NA|192aa|down_7|NZ_AP019845.1_1307150_1307726_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|410aa|down_8|NZ_AP019845.1_1308116_1309346_+	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|789aa|down_9|NZ_AP019845.1_1309413_1311780_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
GCF_007990575.1_ASM799057v1	NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	6	1533795-1534577	5,4,5	CRISPRCasFinder,CRT,PILER-CR	no	cas4,cas2,cas1,csx20,csx1	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	Unclear	GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC,GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC,GTAAAAGTAGTATATCCATTAAAACAAGGATTGAAAC	37,37,37	1	2	1534057-1534094|1534057-1534094	NZ_AP019845.1_2308749-2308786|NZ_AP019845.1_2327185-2327222	I-B:I-B:I-B	10,10,9	10	Unclear	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	csx20|128aa|up_5|NZ_AP019845.1_1527941_1528325_-,NA|634aa|up_4|NZ_AP019845.1_1528345_1530247_-,NA|74aa|up_2|NZ_AP019845.1_1531965_1532187_-,NA|189aa|down_4|NZ_AP019845.1_1539916_1540483_-,NA|180aa|down_9|NZ_AP019845.1_1548086_1548626_+	cas4|208aa|up_9|NZ_AP019845.1_1524687_1525311_-	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas2|97aa|up_8|NZ_AP019845.1_1525325_1525616_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|327aa|up_7|NZ_AP019845.1_1525664_1526645_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|206aa|up_6|NZ_AP019845.1_1526768_1527386_-	pfam12787, EcsC, EcsC protein family	csx20|128aa|up_5|NZ_AP019845.1_1527941_1528325_-	NA	NA|634aa|up_4|NZ_AP019845.1_1528345_1530247_-	NA	csx1|450aa|up_3|NZ_AP019845.1_1530437_1531787_-	TIGR02221, CRISPR-associated_protein_Csx1_2, CRISPR-associated protein, TM1812 family	NA|74aa|up_2|NZ_AP019845.1_1531965_1532187_-	NA	NA|86aa|up_1|NZ_AP019845.1_1532356_1532614_-	PHA03231, PHA03231, glycoprotein BALF4; Provisional	NA|231aa|up_0|NZ_AP019845.1_1532861_1533554_-	COG3596, COG3596, Predicted GTPase [General function prediction only]	NA|336aa|down_0|NZ_AP019845.1_1534884_1535892_-	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|99aa|down_1|NZ_AP019845.1_1535970_1536267_-	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|97aa|down_2|NZ_AP019845.1_1536256_1536547_-	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|661aa|down_3|NZ_AP019845.1_1537895_1539878_-	pfam14253, AbiH, Bacteriophage abortive infection AbiH	NA|189aa|down_4|NZ_AP019845.1_1539916_1540483_-	NA	NA|700aa|down_5|NZ_AP019845.1_1540633_1542733_-	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|124aa|down_6|NZ_AP019845.1_1543370_1543742_-	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|80aa|down_7|NZ_AP019845.1_1543918_1544158_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|1170aa|down_8|NZ_AP019845.1_1544524_1548034_+	TIGR02082, Methionine_synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase	NA|180aa|down_9|NZ_AP019845.1_1548086_1548626_+	NA
GCF_007990575.1_ASM799057v1	NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	7	2425483-2425587	6	CRISPRCasFinder	no		csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	Orphan	TGGTTCTCTTTTCACATATACAAC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	NA|261aa|up_5|NZ_AP019845.1_2420829_2421612_+,NA|73aa|up_4|NZ_AP019845.1_2421689_2421908_+,NA|242aa|down_3|NZ_AP019845.1_2430579_2431305_+	NA|318aa|up_9|NZ_AP019845.1_2415493_2416447_+	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit	NA|287aa|up_8|NZ_AP019845.1_2416846_2417707_-	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|273aa|up_7|NZ_AP019845.1_2417786_2418605_-	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|510aa|up_6|NZ_AP019845.1_2419299_2420829_+	pfam00350, Dynamin_N, Dynamin family	NA|261aa|up_5|NZ_AP019845.1_2420829_2421612_+	NA	NA|73aa|up_4|NZ_AP019845.1_2421689_2421908_+	NA	NA|283aa|up_3|NZ_AP019845.1_2421991_2422840_-	cd13694, PBP2_Cysteine, Substrate binding domain of ABC cysteine transporter; the type 2 periplasmic binding protein fold	NA|254aa|up_2|NZ_AP019845.1_2422897_2423659_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|226aa|up_1|NZ_AP019845.1_2423716_2424394_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|220aa|up_0|NZ_AP019845.1_2424374_2425034_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|597aa|down_0|NZ_AP019845.1_2425985_2427776_+	TIGR01530, Probable_5'-nucleotidase, NAD pyrophosphatase/5'-nucleotidase NadN	NA|123aa|down_1|NZ_AP019845.1_2428227_2428596_+	cd11536, NTP-PPase_iMazG, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|552aa|down_2|NZ_AP019845.1_2428713_2430369_+	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]	NA|242aa|down_3|NZ_AP019845.1_2430579_2431305_+	NA	NA|437aa|down_4|NZ_AP019845.1_2431531_2432842_+	PRK00077, eno, enolase; Provisional	NA|136aa|down_5|NZ_AP019845.1_2433005_2433413_+	pfam09403, FadA, Adhesion protein FadA	NA|138aa|down_6|NZ_AP019845.1_2433493_2433907_+	pfam09403, FadA, Adhesion protein FadA	NA|297aa|down_7|NZ_AP019845.1_2434235_2435126_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|263aa|down_8|NZ_AP019845.1_2435225_2436014_+	pfam03724, META, META domain	NA|216aa|down_9|NZ_AP019845.1_2436213_2436861_+	PRK10838, spr, bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
GCF_007990575.1_ASM799057v1	NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	8	2502765-2503100	7,5,6	CRISPRCasFinder,CRT,PILER-CR	no		csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	Orphan	GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC,GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAAC,GGTTAAAATAGAGTATCCATTAAAACAAGGATTGAAAC	38,37,38	2	2	2502951-2502987|2502950-2502987	NZ_AP019845.1_184086-184050|NZ_AP019845.1_184087-184050	I-B:I-B:I-B	4,4,3	4	Orphan	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	NA|373aa|up_2|NZ_AP019845.1_2499667_2500786_-,NA|294aa|up_1|NZ_AP019845.1_2500803_2501685_-,NA|104aa|down_0|NZ_AP019845.1_2503404_2503716_-,NA|501aa|down_5|NZ_AP019845.1_2510052_2511555_+,NA|81aa|down_9|NZ_AP019845.1_2514611_2514854_+	NA|228aa|up_9|NZ_AP019845.1_2491839_2492523_-	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins	NA|502aa|up_8|NZ_AP019845.1_2492594_2494100_-	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism]	NA|573aa|up_7|NZ_AP019845.1_2494265_2495984_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|390aa|up_6|NZ_AP019845.1_2496132_2497302_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|96aa|up_5|NZ_AP019845.1_2497505_2497793_-	pfam05154, TM2, TM2 domain	NA|120aa|up_4|NZ_AP019845.1_2497842_2498202_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|197aa|up_3|NZ_AP019845.1_2498851_2499442_-	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|373aa|up_2|NZ_AP019845.1_2499667_2500786_-	NA	NA|294aa|up_1|NZ_AP019845.1_2500803_2501685_-	NA	NA|255aa|up_0|NZ_AP019845.1_2501802_2502567_-	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|104aa|down_0|NZ_AP019845.1_2503404_2503716_-	NA	NA|610aa|down_1|NZ_AP019845.1_2503764_2505594_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|511aa|down_2|NZ_AP019845.1_2506348_2507881_-	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|96aa|down_3|NZ_AP019845.1_2508405_2508693_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|298aa|down_4|NZ_AP019845.1_2508918_2509812_+	pfam13145, Rotamase_2, PPIC-type PPIASE domain	NA|501aa|down_5|NZ_AP019845.1_2510052_2511555_+	NA	NA|251aa|down_6|NZ_AP019845.1_2511680_2512433_+	cd03256, ABC_PhnC_transporter, ATP-binding cassette domain of the binding protein-dependent phosphonate transport system	NA|265aa|down_7|NZ_AP019845.1_2512442_2513237_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|273aa|down_8|NZ_AP019845.1_2513257_2514076_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|81aa|down_9|NZ_AP019845.1_2514611_2514854_+	NA
