assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008000855.1_ASM800085v1	NZ_CP042834	Enterococcus faecium strain FA3 chromosome, complete genome	1	1839912-1840001	1	CRISPRCasFinder	no		DinG,csa3,DEDDh,cas3,cas14j	Orphan	TGCAGCAGAGACAACACCTTCTTC	24	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,DEDDh,cas3,cas14j,RT	NA|124aa|up_9|NZ_CP042834.1_1828903_1829275_+,NA|349aa|down_4|NZ_CP042834.1_1844496_1845543_+	NA|124aa|up_9|NZ_CP042834.1_1828903_1829275_+	NA	NA|254aa|up_8|NZ_CP042834.1_1829280_1830042_+	PRK00104, scpA, segregation and condensation protein A; Reviewed	NA|192aa|up_7|NZ_CP042834.1_1830025_1830601_+	PRK00135, scpB, segregation and condensation protein B; Reviewed	NA|239aa|up_6|NZ_CP042834.1_1830601_1831318_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|204aa|up_5|NZ_CP042834.1_1831647_1832259_+	COG3601, COG3601, Predicted membrane protein [Function unknown]	NA|508aa|up_4|NZ_CP042834.1_1832636_1834160_+	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|447aa|up_3|NZ_CP042834.1_1834392_1835733_+	PRK07205, PRK07205, hypothetical protein; Provisional	NA|246aa|up_2|NZ_CP042834.1_1835887_1836625_+	pfam12695, Abhydrolase_5, Alpha/beta hydrolase family	NA|74aa|up_1|NZ_CP042834.1_1836787_1837009_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|468aa|up_0|NZ_CP042834.1_1838056_1839460_+	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|227aa|down_0|NZ_CP042834.1_1840209_1840890_+	PRK00023, cmk, (d)CMP kinase	NA|410aa|down_1|NZ_CP042834.1_1841023_1842253_+	PRK06676, rpsA, 30S ribosomal protein S1; Reviewed	NA|437aa|down_2|NZ_CP042834.1_1842434_1843745_+	PRK00093, PRK00093, GTP-binding protein Der; Reviewed	NA|92aa|down_3|NZ_CP042834.1_1843987_1844263_+	cd13831, HU, histone-like DNA-binding protein HU	NA|349aa|down_4|NZ_CP042834.1_1844496_1845543_+	NA	NA|420aa|down_5|NZ_CP042834.1_1845544_1846804_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|194aa|down_6|NZ_CP042834.1_1846809_1847391_+	PRK03636, PRK03636, hypothetical protein; Provisional	NA|292aa|down_7|NZ_CP042834.1_1847468_1848344_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|111aa|down_8|NZ_CP042834.1_1848491_1848824_+	cd11531, NTP-PPase_BsYpjD, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|403aa|down_9|NZ_CP042834.1_1848935_1850144_+	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional
GCF_008000855.1_ASM800085v1	NZ_CP042833	Enterococcus faecium strain FA3 plasmid unnamed1	1	47563-47691	1	CRISPRCasFinder	no		csa3,RT	Orphan	GGTATGATTTTCATACCCTCTTGA	24	0	0	NA	NA	NA	2	2	Orphan	DinG,csa3,DEDDh,cas3,cas14j,RT	NA|87aa|up_8|NZ_CP042833.1_39305_39566_-,NA|254aa|up_7|NZ_CP042833.1_39578_40340_-,NA|78aa|up_3|NZ_CP042833.1_44228_44462_-,NA|97aa|up_2|NZ_CP042833.1_44653_44944_-,NA|111aa|up_0|NZ_CP042833.1_45922_46255_-,NA|312aa|down_2|NZ_CP042833.1_51540_52476_+,NA|110aa|down_8|NZ_CP042833.1_59694_60024_+	NA|697aa|up_9|NZ_CP042833.1_37218_39309_-	pfam17998, AgI_II_C2, Cell surface antigen I/II C2 terminal domain	NA|87aa|up_8|NZ_CP042833.1_39305_39566_-	NA	NA|254aa|up_7|NZ_CP042833.1_39578_40340_-	NA	NA|251aa|up_6|NZ_CP042833.1_40355_41108_-	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|659aa|up_5|NZ_CP042833.1_41122_43099_-	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|224aa|up_4|NZ_CP042833.1_43151_43823_-	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|78aa|up_3|NZ_CP042833.1_44228_44462_-	NA	NA|97aa|up_2|NZ_CP042833.1_44653_44944_-	NA	NA|114aa|up_1|NZ_CP042833.1_44962_45304_-	pfam17400, DUF5406, Family of unknown function (DUF5406)	NA|111aa|up_0|NZ_CP042833.1_45922_46255_-	NA	NA|85aa|down_0|NZ_CP042833.1_50409_50664_+	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote	NA|106aa|down_1|NZ_CP042833.1_50664_50982_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|312aa|down_2|NZ_CP042833.1_51540_52476_+	NA	NA|285aa|down_3|NZ_CP042833.1_53559_54414_+	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|750aa|down_4|NZ_CP042833.1_54510_56760_+	COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism]	NA|392aa|down_5|NZ_CP042833.1_56762_57938_+	cd17473, MFS_arabinose_efflux_permease_like, Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily	NA|88aa|down_6|NZ_CP042833.1_59082_59346_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|91aa|down_7|NZ_CP042833.1_59345_59618_+	TIGR02116, Hypothetical_protein_Rv3358/MT3466/Mb3393	NA|110aa|down_8|NZ_CP042833.1_59694_60024_+	NA	NA|96aa|down_9|NZ_CP042833.1_60013_60301_+	pfam15781, ParE-like_toxin, ParE-like toxin of type II bacterial toxin-antitoxin system
