assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008000975.1_ASM800097v1	NZ_CP042830	Akkermansia muciniphila strain DSM 22959 chromosome, complete genome	1	2436220-2436979	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	DEDDh,csa3,DinG,cas3,cas2,cas1,cas9	 or Type II-C?,Type II-A,Type II-C,Type II-B, Type II-B	GTTTTGCCTTGAATCCAAAATAAGGCACAGTACAAC,GTTTTGCCTTGAATCCAAAATAAGGCACAGTACAAC,GTTTTGCCTTGAATCCAAAATAAGGCACAGTACAAC	36,36,36	0	0	NA	NA	NA:NA:NA	11,11,8	11	orTypeII-C?,TypeII-A,TypeII-C,TypeII-B,TypeII-B	DEDDh,csa3,DinG,cas3,cas2,cas1,cas9	NA,NA	NA|341aa|up_9|NZ_CP042830.1_2422804_2423827_-	pfam13387, DUF4105, Domain of unknown function (DUF4105)	NA|840aa|up_8|NZ_CP042830.1_2423887_2426407_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|342aa|up_7|NZ_CP042830.1_2426427_2427453_-	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|395aa|up_6|NZ_CP042830.1_2427619_2428804_-	COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism]	NA|680aa|up_5|NZ_CP042830.1_2428999_2431039_-	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like	NA|614aa|up_4|NZ_CP042830.1_2431047_2432889_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|276aa|up_3|NZ_CP042830.1_2432979_2433807_+	pfam07885, Ion_trans_2, Ion channel	NA|205aa|up_2|NZ_CP042830.1_2433882_2434497_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|81aa|up_1|NZ_CP042830.1_2434545_2434788_-	sd00010, SLR, Sel1-like repeat	NA|357aa|up_0|NZ_CP042830.1_2435077_2436148_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	cas2|104aa|down_0|NZ_CP042830.1_2437039_2437351_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|312aa|down_1|NZ_CP042830.1_2437338_2438274_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1102aa|down_2|NZ_CP042830.1_2438284_2441590_-	pfam13395, HNH_4, HNH endonuclease	NA|369aa|down_3|NZ_CP042830.1_2441956_2443063_+	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|147aa|down_4|NZ_CP042830.1_2443162_2443603_+	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein	NA|429aa|down_5|NZ_CP042830.1_2443738_2445025_+	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]	NA|310aa|down_6|NZ_CP042830.1_2445061_2445991_+	TIGR01136, Cysteine_synthase, cysteine synthase	NA|205aa|down_7|NZ_CP042830.1_2446009_2446624_+	PRK00043, thiE, thiamine phosphate synthase	NA|272aa|down_8|NZ_CP042830.1_2446671_2447487_+	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|162aa|down_9|NZ_CP042830.1_2447774_2448260_+	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]
GCF_008000975.1_ASM800097v1	NZ_CP042830	Akkermansia muciniphila strain DSM 22959 chromosome, complete genome	2	2505602-2505839	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,csa3,DinG,cas3,cas2,cas1,cas9	Orphan	GTTTCAATCCACGCACTCCTTGCGGAGTGCGAC,GTTTCAATCCACGCACTCCTT,GTTTCAATCCACGCACTCCTTGCGGAGTGCGAC	33,21,33	0	0	NA	NA	NA:NA:NA	3,3,2	3	Orphan	DEDDh,csa3,DinG,cas3,cas2,cas1,cas9	NA|294aa|up_6|NZ_CP042830.1_2500991_2501873_-,NA|94aa|up_5|NZ_CP042830.1_2501865_2502147_-,NA|69aa|up_3|NZ_CP042830.1_2503786_2503993_-,NA|86aa|up_0|NZ_CP042830.1_2505278_2505536_+,NA|326aa|down_2|NZ_CP042830.1_2511594_2512572_-,NA|210aa|down_8|NZ_CP042830.1_2520616_2521246_-	NA|115aa|up_9|NZ_CP042830.1_2498666_2499011_-	TIGR04535, conserved_hypothetical_protein, ferritin-like protein	NA|115aa|up_8|NZ_CP042830.1_2499293_2499638_-	TIGR04535, conserved_hypothetical_protein, ferritin-like protein	NA|168aa|up_7|NZ_CP042830.1_2499818_2500322_-	pfam13098, Thioredoxin_2, Thioredoxin-like domain	NA|294aa|up_6|NZ_CP042830.1_2500991_2501873_-	NA	NA|94aa|up_5|NZ_CP042830.1_2501865_2502147_-	NA	NA|545aa|up_4|NZ_CP042830.1_2502143_2503778_-	pfam12236, Head-tail_con, Bacteriophage head to tail connecting protein	NA|69aa|up_3|NZ_CP042830.1_2503786_2503993_-	NA	NA|207aa|up_2|NZ_CP042830.1_2504317_2504938_+	PHA00662, PHA00662, hypothetical protein	NA|98aa|up_1|NZ_CP042830.1_2504988_2505282_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|86aa|up_0|NZ_CP042830.1_2505278_2505536_+	NA	NA|385aa|down_0|NZ_CP042830.1_2506235_2507390_-	pfam01757, Acyl_transf_3, Acyltransferase family	NA|1194aa|down_1|NZ_CP042830.1_2507854_2511436_-	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA	NA|326aa|down_2|NZ_CP042830.1_2511594_2512572_-	NA	NA|150aa|down_3|NZ_CP042830.1_2512589_2513039_-	COG1847, Jag, Predicted RNA-binding protein [General function prediction only]	NA|756aa|down_4|NZ_CP042830.1_2513551_2515819_+	PRK11249, katE, hydroperoxidase II; Provisional	NA|898aa|down_5|NZ_CP042830.1_2516326_2519020_-	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|192aa|down_6|NZ_CP042830.1_2519068_2519644_-	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain	NA|199aa|down_7|NZ_CP042830.1_2519945_2520542_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|210aa|down_8|NZ_CP042830.1_2520616_2521246_-	NA	NA|819aa|down_9|NZ_CP042830.1_2521265_2523722_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]
