assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	1	353690-353797	1	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	TACGCGGGACGGTCCTTTCCATGGAGCGTTTCGACGA	37	1	1	353727-353760	NZ_CP042997.1_8923791-8923824	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|142aa|up_9|NZ_CP042997.1_339472_339898_+,NA|269aa|down_2|NZ_CP042997.1_355775_356582_-	NA|142aa|up_9|NZ_CP042997.1_339472_339898_+	NA	NA|76aa|up_8|NZ_CP042997.1_340096_340324_-	COG2442, COG2442, Uncharacterized conserved protein [Function unknown]	NA|526aa|up_7|NZ_CP042997.1_340445_342023_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|689aa|up_6|NZ_CP042997.1_342347_344414_-	COG1770, PtrB, Protease II [Amino acid transport and metabolism]	NA|437aa|up_5|NZ_CP042997.1_344529_345840_-	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|307aa|up_4|NZ_CP042997.1_345836_346757_-	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|409aa|up_3|NZ_CP042997.1_347018_348245_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|319aa|up_2|NZ_CP042997.1_348630_349587_+	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|438aa|up_1|NZ_CP042997.1_349864_351178_-	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|444aa|up_0|NZ_CP042997.1_352083_353415_+	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|118aa|down_0|NZ_CP042997.1_354406_354760_+	pfam13744, HTH_37, Helix-turn-helix domain	NA|278aa|down_1|NZ_CP042997.1_354910_355744_-	pfam11236, DUF3037, Protein of unknown function (DUF3037)	NA|269aa|down_2|NZ_CP042997.1_355775_356582_-	NA	NA|982aa|down_3|NZ_CP042997.1_356689_359635_-	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|89aa|down_4|NZ_CP042997.1_359984_360251_-	pfam03683, UPF0175, Uncharacterized protein family (UPF0175)	NA|1018aa|down_5|NZ_CP042997.1_360271_363325_-	COG1743, COG1743, Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair]	NA|492aa|down_6|NZ_CP042997.1_363321_364797_-	pfam13175, AAA_15, AAA ATPase domain	NA|1154aa|down_7|NZ_CP042997.1_364789_368251_-	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA	NA|290aa|down_8|NZ_CP042997.1_369118_369988_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|203aa|down_9|NZ_CP042997.1_370017_370626_+	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	2	453114-453674	1	CRT	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GCCGTCGGTGTCAGATCT	18	0	0	NA	NA	NA	9	9	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|91aa|up_7|NZ_CP042997.1_441196_441469_-,NA|164aa|down_6|NZ_CP042997.1_464405_464897_+,NA|374aa|down_9|NZ_CP042997.1_472966_474088_+	NA|193aa|up_9|NZ_CP042997.1_439228_439807_+	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|446aa|up_8|NZ_CP042997.1_439825_441163_+	COG2834, LolA, Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane]	NA|91aa|up_7|NZ_CP042997.1_441196_441469_-	NA	NA|436aa|up_6|NZ_CP042997.1_441534_442842_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|543aa|up_5|NZ_CP042997.1_443052_444681_-	COG3604, FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms]	NA|355aa|up_4|NZ_CP042997.1_445306_446371_+	cd01005, PBP2_CysP, Substrate binding domain of an active sulfate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|280aa|up_3|NZ_CP042997.1_446375_447215_+	TIGR00969, Sulfate_transport_system_permease_protein_CysT, sulfate ABC transporter, permease protein	NA|296aa|up_2|NZ_CP042997.1_447204_448092_+	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]	NA|366aa|up_1|NZ_CP042997.1_448262_449360_+	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter	NA|445aa|up_0|NZ_CP042997.1_451078_452413_+	TIGR04315, cytochrome_c_family_protein, octaheme c-type cytochrome, tetrathionate reductase family	NA|109aa|down_0|NZ_CP042997.1_453750_454077_-	pfam11535, Calci_bind_CcbP, Calcium binding	NA|102aa|down_1|NZ_CP042997.1_454384_454690_-	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|512aa|down_2|NZ_CP042997.1_455079_456615_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|354aa|down_3|NZ_CP042997.1_456670_457732_-	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|396aa|down_4|NZ_CP042997.1_458595_459783_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|1240aa|down_5|NZ_CP042997.1_460335_464055_+	pfam18657, YDG, YDG domain	NA|164aa|down_6|NZ_CP042997.1_464405_464897_+	NA	NA|917aa|down_7|NZ_CP042997.1_465508_468259_+	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|1235aa|down_8|NZ_CP042997.1_468639_472344_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|374aa|down_9|NZ_CP042997.1_472966_474088_+	NA
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	3	546619-546968	2	CRT	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GCCGCCGCTGGAGCCGCCG	19	0	0	NA	NA	NA	6	6	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|582aa|up_8|NZ_CP042997.1_539156_540902_-,NA|46aa|up_5|NZ_CP042997.1_543529_543667_-,NA|193aa|up_0|NZ_CP042997.1_545960_546539_-,NA|185aa|down_3|NZ_CP042997.1_551406_551961_+,NA|258aa|down_9|NZ_CP042997.1_562434_563208_-	NA|641aa|up_9|NZ_CP042997.1_537166_539089_-	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	NA|582aa|up_8|NZ_CP042997.1_539156_540902_-	NA	NA|399aa|up_7|NZ_CP042997.1_541056_542253_-	cd17575, REC_WspR-like, phosphoacceptor receiver (REC) domain of WspR response regulator and similar proteins	NA|355aa|up_6|NZ_CP042997.1_542298_543363_-	PRK12555, PRK12555, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|46aa|up_5|NZ_CP042997.1_543529_543667_-	NA	NA|72aa|up_4|NZ_CP042997.1_543714_543930_-	pfam18480, DUF5615, Domain of unknown function (DUF5615)	NA|78aa|up_3|NZ_CP042997.1_543929_544163_-	COG2442, COG2442, Uncharacterized conserved protein [Function unknown]	NA|88aa|up_2|NZ_CP042997.1_544403_544667_+	PRK06771, PRK06771, hypothetical protein; Provisional	NA|353aa|up_1|NZ_CP042997.1_544914_545973_-	smart00752, HTTM, Horizontally Transferred TransMembrane Domain	NA|193aa|up_0|NZ_CP042997.1_545960_546539_-	NA	NA|350aa|down_0|NZ_CP042997.1_547423_548473_-	pfam09492, Pec_lyase, Pectic acid lyase	NA|567aa|down_1|NZ_CP042997.1_548626_550327_+	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|312aa|down_2|NZ_CP042997.1_550212_551148_+	pfam12006, DUF3500, Protein of unknown function (DUF3500)	NA|185aa|down_3|NZ_CP042997.1_551406_551961_+	NA	NA|264aa|down_4|NZ_CP042997.1_552134_552926_+	COG1912, COG1912, Uncharacterized conserved protein [Function unknown]	NA|380aa|down_5|NZ_CP042997.1_552939_554079_-	cd01543, PBP1_XylR, ligand-binding domain of DNA transcription repressor specific for xylose (XylR)	NA|257aa|down_6|NZ_CP042997.1_554302_555073_+	PRK07231, FabG-like, SDR family oxidoreductase	NA|1466aa|down_7|NZ_CP042997.1_555305_559703_+	pfam07944, Glyco_hydro_127, Beta-L-arabinofuranosidase, GH127	NA|680aa|down_8|NZ_CP042997.1_560174_562214_+	COG3534, AbfA, Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]	NA|258aa|down_9|NZ_CP042997.1_562434_563208_-	NA
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	4	601016-601098	2	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CGCCCGGTCGCCGGACGGAGCCGGCTCCC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|87aa|up_8|NZ_CP042997.1_592532_592793_+,NA|81aa|up_3|NZ_CP042997.1_597754_597997_-,NA|93aa|down_3|NZ_CP042997.1_604403_604682_-,NA|144aa|down_5|NZ_CP042997.1_606875_607307_-	NA|653aa|up_9|NZ_CP042997.1_590256_592215_-	PRK11504, tynA, primary-amine oxidase	NA|87aa|up_8|NZ_CP042997.1_592532_592793_+	NA	NA|259aa|up_7|NZ_CP042997.1_593000_593777_-	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|397aa|up_6|NZ_CP042997.1_593997_595188_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|199aa|up_5|NZ_CP042997.1_595242_595839_+	cd06260, DUF820, Domain of unknown function (DUF820)	NA|156aa|up_4|NZ_CP042997.1_597294_597762_-	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs	NA|81aa|up_3|NZ_CP042997.1_597754_597997_-	NA	NA|744aa|up_2|NZ_CP042997.1_598136_600368_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|58aa|up_1|NZ_CP042997.1_600537_600711_-	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family    [General function prediction only]	NA|70aa|up_0|NZ_CP042997.1_600707_600917_-	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|435aa|down_0|NZ_CP042997.1_601266_602571_+	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]	NA|396aa|down_1|NZ_CP042997.1_602710_603898_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|59aa|down_2|NZ_CP042997.1_604118_604295_-	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme	NA|93aa|down_3|NZ_CP042997.1_604403_604682_-	NA	NA|482aa|down_4|NZ_CP042997.1_604744_606190_-	TIGR00911, High-affinity_methionine_permease, L-type amino acid transporter	NA|144aa|down_5|NZ_CP042997.1_606875_607307_-	NA	NA|346aa|down_6|NZ_CP042997.1_607522_608560_-	PRK06995, flhF, flagellar biosynthesis protein FlhF	NA|315aa|down_7|NZ_CP042997.1_609098_610043_-	pfam13349, DUF4097, Putative adhesin	NA|190aa|down_8|NZ_CP042997.1_610208_610778_-	pfam07617, DUF1579, Protein of unknown function (DUF1579)	NA|317aa|down_9|NZ_CP042997.1_611008_611959_-	PRK12921, PRK12921, oxidoreductase
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	5	627310-627412	3	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GCCGGCCCCGTGGGAGCCGGCTCCGCCCG	29	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|47aa|up_5|NZ_CP042997.1_615095_615236_-,NA|123aa|up_2|NZ_CP042997.1_618560_618929_+,NA|115aa|up_1|NZ_CP042997.1_618957_619302_+,NA|146aa|down_4|NZ_CP042997.1_637708_638146_+,NA|295aa|down_5|NZ_CP042997.1_639107_639992_-,NA|203aa|down_6|NZ_CP042997.1_640811_641420_-	NA|317aa|up_9|NZ_CP042997.1_611008_611959_-	PRK12921, PRK12921, oxidoreductase	NA|109aa|up_8|NZ_CP042997.1_612107_612434_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|310aa|up_7|NZ_CP042997.1_612535_613465_+	COG3781, COG3781, Predicted membrane protein [Function unknown]	NA|411aa|up_6|NZ_CP042997.1_613652_614885_-	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|47aa|up_5|NZ_CP042997.1_615095_615236_-	NA	NA|590aa|up_4|NZ_CP042997.1_615234_617004_+	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism]	NA|402aa|up_3|NZ_CP042997.1_617358_618564_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|123aa|up_2|NZ_CP042997.1_618560_618929_+	NA	NA|115aa|up_1|NZ_CP042997.1_618957_619302_+	NA	NA|2369aa|up_0|NZ_CP042997.1_620048_627155_+	smart00237, Calx_beta, Domains in Na-Ca exchangers and integrin-beta4	NA|2290aa|down_0|NZ_CP042997.1_627654_634524_-	pfam16208, Keratin_2_head, Keratin type II head	NA|316aa|down_1|NZ_CP042997.1_634750_635698_-	pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10	NA|261aa|down_2|NZ_CP042997.1_636019_636802_-	pfam12833, HTH_18, Helix-turn-helix domain	NA|194aa|down_3|NZ_CP042997.1_637130_637712_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|146aa|down_4|NZ_CP042997.1_637708_638146_+	NA	NA|295aa|down_5|NZ_CP042997.1_639107_639992_-	NA	NA|203aa|down_6|NZ_CP042997.1_640811_641420_-	NA	NA|554aa|down_7|NZ_CP042997.1_642118_643780_-	sd00006, TPR, Tetratricopeptide repeat	NA|329aa|down_8|NZ_CP042997.1_643885_644872_-	pfam04960, Glutaminase, Glutaminase	NA|256aa|down_9|NZ_CP042997.1_645021_645789_-	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	6	779295-783595	1,4,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	 Type I-U?,Type I-C,Type I-U	GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC,GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC,GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	62,64,64	64	TypeI-U?,TypeI-C,TypeI-U	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA,NA|64aa|down_0|NZ_CP042997.1_783956_784148_-,NA|117aa|down_1|NZ_CP042997.1_784213_784564_-,NA|85aa|down_2|NZ_CP042997.1_785602_785857_-,NA|80aa|down_6|NZ_CP042997.1_788484_788724_+,NA|316aa|down_8|NZ_CP042997.1_789528_790476_+,NA|100aa|down_9|NZ_CP042997.1_790475_790775_+	NA|2471aa|up_9|NZ_CP042997.1_760662_768075_-	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane]	NA|238aa|up_8|NZ_CP042997.1_768491_769205_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|403aa|up_7|NZ_CP042997.1_769504_770713_-	cd03823, GT4_ExpE7-like, glycosyltransferase ExpE7 and similar proteins	cas3|767aa|up_6|NZ_CP042997.1_771372_773673_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|221aa|up_5|NZ_CP042997.1_773688_774351_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|589aa|up_4|NZ_CP042997.1_774347_776114_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|320aa|up_3|NZ_CP042997.1_776106_777066_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|218aa|up_2|NZ_CP042997.1_777069_777723_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|349aa|up_1|NZ_CP042997.1_777729_778776_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP042997.1_778826_779117_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|64aa|down_0|NZ_CP042997.1_783956_784148_-	NA	NA|117aa|down_1|NZ_CP042997.1_784213_784564_-	NA	NA|85aa|down_2|NZ_CP042997.1_785602_785857_-	NA	NA|123aa|down_3|NZ_CP042997.1_786295_786664_+	pfam06868, DUF1257, Protein of unknown function (DUF1257)	NA|65aa|down_4|NZ_CP042997.1_786660_786855_+	pfam11211, DUF2997, Protein of unknown function (DUF2997)	NA|500aa|down_5|NZ_CP042997.1_786934_788434_+	CHL00195, ycf46, Ycf46; Provisional	NA|80aa|down_6|NZ_CP042997.1_788484_788724_+	NA	NA|213aa|down_7|NZ_CP042997.1_788707_789346_+	pfam14014, DUF4230, Protein of unknown function (DUF4230)	NA|316aa|down_8|NZ_CP042997.1_789528_790476_+	NA	NA|100aa|down_9|NZ_CP042997.1_790475_790775_+	NA
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	7	1020312-1020409	5	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GGGAGCCGGCTCCGCCCGGCGAGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|75aa|up_7|NZ_CP042997.1_1012330_1012555_+,NA|109aa|down_1|NZ_CP042997.1_1022352_1022679_-,NA|59aa|down_2|NZ_CP042997.1_1022733_1022910_-	NA|122aa|up_9|NZ_CP042997.1_1008511_1008877_-	pfam07638, Sigma70_ECF, ECF sigma factor	NA|928aa|up_8|NZ_CP042997.1_1009346_1012130_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|75aa|up_7|NZ_CP042997.1_1012330_1012555_+	NA	NA|114aa|up_6|NZ_CP042997.1_1012770_1013112_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|338aa|up_5|NZ_CP042997.1_1013262_1014276_+	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|197aa|up_4|NZ_CP042997.1_1014346_1014937_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|337aa|up_3|NZ_CP042997.1_1015083_1016094_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|198aa|up_2|NZ_CP042997.1_1016236_1016830_+	cd14797, DUF302, Uncharacterized domain family DUF302	NA|327aa|up_1|NZ_CP042997.1_1016872_1017853_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|716aa|up_0|NZ_CP042997.1_1018084_1020232_+	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|319aa|down_0|NZ_CP042997.1_1020730_1021687_-	cd19100, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein	NA|109aa|down_1|NZ_CP042997.1_1022352_1022679_-	NA	NA|59aa|down_2|NZ_CP042997.1_1022733_1022910_-	NA	NA|208aa|down_3|NZ_CP042997.1_1023182_1023806_+	COG5654, COG5654, Uncharacterized conserved protein [Function unknown]	NA|178aa|down_4|NZ_CP042997.1_1023892_1024426_+	COG1396, HipB, Predicted transcriptional regulators [Transcription]	NA|410aa|down_5|NZ_CP042997.1_1024536_1025766_-	pfam14568, SUKH_6, SMI1-KNR4 cell-wall	NA|474aa|down_6|NZ_CP042997.1_1026015_1027437_+	pfam13204, DUF4038, Protein of unknown function (DUF4038)	NA|423aa|down_7|NZ_CP042997.1_1027676_1028945_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|426aa|down_8|NZ_CP042997.1_1029077_1030355_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|161aa|down_9|NZ_CP042997.1_1030364_1030847_-	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	8	1554603-1554685	6	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CGCCCGCTCGCCGGGCCGAGCCGGCTCCC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA,NA|168aa|down_1|NZ_CP042997.1_1556263_1556767_+	NA|430aa|up_9|NZ_CP042997.1_1536753_1538043_+	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL	NA|433aa|up_8|NZ_CP042997.1_1538154_1539453_+	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like	NA|289aa|up_7|NZ_CP042997.1_1539907_1540774_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|334aa|up_6|NZ_CP042997.1_1540901_1541903_+	cd05282, ETR_like, 2-enoyl thioester reductase-like	NA|371aa|up_5|NZ_CP042997.1_1542913_1544026_-	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3)	NA|276aa|up_4|NZ_CP042997.1_1544329_1545157_-	COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]	NA|476aa|up_3|NZ_CP042997.1_1545153_1546581_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|761aa|up_2|NZ_CP042997.1_1546679_1548962_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|127aa|up_1|NZ_CP042997.1_1550060_1550441_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|262aa|up_0|NZ_CP042997.1_1550624_1551410_+	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|317aa|down_0|NZ_CP042997.1_1555097_1556048_-	pfam13499, EF-hand_7, EF-hand domain pair	NA|168aa|down_1|NZ_CP042997.1_1556263_1556767_+	NA	NA|595aa|down_2|NZ_CP042997.1_1556808_1558593_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|897aa|down_3|NZ_CP042997.1_1558790_1561481_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|358aa|down_4|NZ_CP042997.1_1561504_1562578_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|786aa|down_5|NZ_CP042997.1_1562874_1565232_+	pfam07631, PSD4, Protein of unknown function (DUF1592)	NA|449aa|down_6|NZ_CP042997.1_1565285_1566632_+	pfam07586, HXXSHH, Protein of unknown function (DUF1552)	NA|776aa|down_7|NZ_CP042997.1_1566675_1569003_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|214aa|down_8|NZ_CP042997.1_1568999_1569641_-	TIGR02984, Sig-70_plancto1, RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1	NA|609aa|down_9|NZ_CP042997.1_1569739_1571566_-	cd03283, ABC_MutS-like, ATP-binding cassette domain of MutS-like homolog
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	9	1845285-1845408	7	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CCAACGGGGACGGCGTGGTCGACTCCAAGGACCT	34	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|230aa|up_8|NZ_CP042997.1_1832106_1832796_-,NA|147aa|down_1|NZ_CP042997.1_1850678_1851119_-,NA|222aa|down_4|NZ_CP042997.1_1856538_1857204_+,NA|97aa|down_7|NZ_CP042997.1_1859990_1860281_-,NA|53aa|down_8|NZ_CP042997.1_1860313_1860472_-	NA|518aa|up_9|NZ_CP042997.1_1830534_1832088_+	TIGR04367, protein_of_the_SAM_superfamily, hopanoid C-3 methylase HpnR	NA|230aa|up_8|NZ_CP042997.1_1832106_1832796_-	NA	NA|327aa|up_7|NZ_CP042997.1_1833139_1834120_-	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed	NA|206aa|up_6|NZ_CP042997.1_1834163_1834781_-	PRK00150, def, peptide deformylase; Reviewed	NA|778aa|up_5|NZ_CP042997.1_1834889_1837223_-	pfam14238, DUF4340, Domain of unknown function (DUF4340)	NA|616aa|up_4|NZ_CP042997.1_1837301_1839149_-	pfam09822, ABC_transp_aux, ABC-type uncharacterized transport system	NA|255aa|up_3|NZ_CP042997.1_1839183_1839948_-	TIGR03518, ABC_transporter_permease_protein, gliding motility-associated ABC transporter permease protein GldF	NA|318aa|up_2|NZ_CP042997.1_1839947_1840901_-	TIGR03522, GldA_ABC_ATP, gliding motility-associated ABC transporter ATP-binding subunit GldA	NA|363aa|up_1|NZ_CP042997.1_1841094_1842183_-	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	NA|220aa|up_0|NZ_CP042997.1_1842306_1842966_-	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|1150aa|down_0|NZ_CP042997.1_1847174_1850624_+	PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	NA|147aa|down_1|NZ_CP042997.1_1850678_1851119_-	NA	NA|990aa|down_2|NZ_CP042997.1_1851274_1854244_+	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain	NA|622aa|down_3|NZ_CP042997.1_1854300_1856166_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|222aa|down_4|NZ_CP042997.1_1856538_1857204_+	NA	NA|718aa|down_5|NZ_CP042997.1_1857450_1859604_+	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins	NA|57aa|down_6|NZ_CP042997.1_1859731_1859902_-	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|97aa|down_7|NZ_CP042997.1_1859990_1860281_-	NA	NA|53aa|down_8|NZ_CP042997.1_1860313_1860472_-	NA	NA|522aa|down_9|NZ_CP042997.1_1860646_1862212_-	COG3596, COG3596, Predicted GTPase [General function prediction only]
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	10	1900215-1900612	8,4	CRISPRCasFinder,CRT	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CCCGCCTGGTTGAGCGGGTTGTTGAA,GTACANNCCCNCCTGGTTNANCGGGTTGTTG	26,31	0	0	NA	NA	NA:NA	7,6	7	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|164aa|up_7|NZ_CP042997.1_1889983_1890475_+,NA|147aa|up_6|NZ_CP042997.1_1890607_1891048_+,NA|382aa|up_4|NZ_CP042997.1_1892795_1893941_+,NA|398aa|down_3|NZ_CP042997.1_1905976_1907170_-,NA|214aa|down_9|NZ_CP042997.1_1912703_1913345_+	NA|177aa|up_9|NZ_CP042997.1_1887146_1887677_-	COG0456, RimI, Acetyltransferases [General function prediction only]	NA|653aa|up_8|NZ_CP042997.1_1887777_1889736_-	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|164aa|up_7|NZ_CP042997.1_1889983_1890475_+	NA	NA|147aa|up_6|NZ_CP042997.1_1890607_1891048_+	NA	NA|440aa|up_5|NZ_CP042997.1_1891079_1892399_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|382aa|up_4|NZ_CP042997.1_1892795_1893941_+	NA	NA|333aa|up_3|NZ_CP042997.1_1894106_1895105_+	PRK13480, PRK13480, 3'-5' exoribonuclease YhaM; Provisional	NA|94aa|up_2|NZ_CP042997.1_1895186_1895468_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|593aa|up_1|NZ_CP042997.1_1895733_1897512_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|715aa|up_0|NZ_CP042997.1_1897535_1899680_-	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase	NA|580aa|down_0|NZ_CP042997.1_1900992_1902732_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|780aa|down_1|NZ_CP042997.1_1902873_1905213_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed	NA|108aa|down_2|NZ_CP042997.1_1905566_1905890_+	COG0633, Fdx, Ferredoxin [Energy production and conversion]	NA|398aa|down_3|NZ_CP042997.1_1905976_1907170_-	NA	NA|289aa|down_4|NZ_CP042997.1_1907471_1908338_-	COG2321, COG2321, Predicted metalloprotease [General function prediction only]	NA|416aa|down_5|NZ_CP042997.1_1908463_1909711_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|211aa|down_6|NZ_CP042997.1_1909791_1910424_-	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair]	NA|160aa|down_7|NZ_CP042997.1_1910461_1910941_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|344aa|down_8|NZ_CP042997.1_1911694_1912726_+	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|214aa|down_9|NZ_CP042997.1_1912703_1913345_+	NA
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	11	2094029-2094182	9	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GGCCGATGCCCCGGCCCCCGCGCCG	25	1	7	2094099-2094115|2094099-2094115|2094099-2094115|2094099-2094115|2094099-2094115|2094099-2094115|2094099-2094115	NZ_CP042997.1_5044719-5044703|NZ_CP042997.1_5791483-5791467|NZ_CP042997.1_412069-412085|NZ_CP042997.1_4387813-4387829|NZ_CP042997.1_5859138-5859154|NZ_CP042997.1_8720923-8720939|NZ_CP042997.1_9077483-9077499	NA	3	3	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|79aa|up_5|NZ_CP042997.1_2088437_2088674_+,NA|365aa|down_8|NZ_CP042997.1_2115365_2116460_-	NA|159aa|up_9|NZ_CP042997.1_2081103_2081580_-	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|1071aa|up_8|NZ_CP042997.1_2081692_2084905_-	PRK05306, infB, translation initiation factor IF-2; Validated	NA|559aa|up_7|NZ_CP042997.1_2085182_2086859_-	PRK09202, nusA, transcription elongation factor NusA; Validated	NA|272aa|up_6|NZ_CP042997.1_2087401_2088217_+	cd01310, TatD_DNAse, TatD like proteins;  E	NA|79aa|up_5|NZ_CP042997.1_2088437_2088674_+	NA	NA|242aa|up_4|NZ_CP042997.1_2088701_2089427_-	TIGR04349, Radical_SAM_domain_protein, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE, gammaproteobacterial type	NA|146aa|up_3|NZ_CP042997.1_2089540_2089978_-	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins	NA|267aa|up_2|NZ_CP042997.1_2090186_2090987_+	pfam13489, Methyltransf_23, Methyltransferase domain	NA|330aa|up_1|NZ_CP042997.1_2091075_2092065_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|419aa|up_0|NZ_CP042997.1_2092287_2093544_+	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|1721aa|down_0|NZ_CP042997.1_2096175_2101338_+	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|1680aa|down_1|NZ_CP042997.1_2101437_2106477_+	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|527aa|down_2|NZ_CP042997.1_2106731_2108312_-	pfam14331, ImcF-related_N, ImcF-related N-terminal domain	NA|221aa|down_3|NZ_CP042997.1_2108328_2108991_-	pfam09850, DotU, Type VI secretion system protein DotU	NA|479aa|down_4|NZ_CP042997.1_2109079_2110516_-	TIGR03353, VI_chp_4, type VI secretion protein, VC_A0114 family	NA|469aa|down_5|NZ_CP042997.1_2110684_2112091_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|321aa|down_6|NZ_CP042997.1_2112294_2113257_+	pfam07607, DUF1570, Protein of unknown function (DUF1570)	NA|650aa|down_7|NZ_CP042997.1_2113308_2115258_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|365aa|down_8|NZ_CP042997.1_2115365_2116460_-	NA	NA|294aa|down_9|NZ_CP042997.1_2116608_2117490_-	PRK13905, murB, UDP-N-acetylmuramate dehydrogenase
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	12	2244964-2245070	10	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CGTCCTGGGCGGCTCGGGCGATGACA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|237aa|up_3|NZ_CP042997.1_2234271_2234982_-,NA|156aa|up_2|NZ_CP042997.1_2235098_2235566_-,NA	NA|233aa|up_9|NZ_CP042997.1_2227563_2228262_-	PRK00698, tmk, thymidylate kinase; Validated	NA|160aa|up_8|NZ_CP042997.1_2228344_2228824_-	cd03428, Ap4A_hydrolase_human_like, Diadenosine tetraphosphate (Ap4A) hydrolase is a member of the Nudix hydrolase superfamily	NA|117aa|up_7|NZ_CP042997.1_2228820_2229171_-	cd06849, lipoyl_domain, Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases	NA|545aa|up_6|NZ_CP042997.1_2229306_2230941_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|620aa|up_5|NZ_CP042997.1_2231338_2233198_+	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|360aa|up_4|NZ_CP042997.1_2233214_2234294_+	pfam04945, YHS, YHS domain	NA|237aa|up_3|NZ_CP042997.1_2234271_2234982_-	NA	NA|156aa|up_2|NZ_CP042997.1_2235098_2235566_-	NA	NA|414aa|up_1|NZ_CP042997.1_2235582_2236824_-	cd03586, PolY_Pol_IV_kappa, DNA Polymerase IV/Kappa	NA|1226aa|up_0|NZ_CP042997.1_2239506_2243184_+	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|662aa|down_0|NZ_CP042997.1_2246499_2248485_-	cd16148, sulfatase_like, uncharacterized sulfatase subfamily	NA|344aa|down_1|NZ_CP042997.1_2248673_2249705_-	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|146aa|down_2|NZ_CP042997.1_2249855_2250293_-	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|992aa|down_3|NZ_CP042997.1_2251204_2254180_+	pfam07593, UnbV_ASPIC, ASPIC and UnbV	NA|351aa|down_4|NZ_CP042997.1_2254425_2255478_+	cd00519, Lipase_3, Lipase (class 3)	NA|343aa|down_5|NZ_CP042997.1_2255554_2256583_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|310aa|down_6|NZ_CP042997.1_2256605_2257535_-	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	NA|360aa|down_7|NZ_CP042997.1_2258006_2259086_+	PRK00035, hemH, ferrochelatase; Reviewed	NA|151aa|down_8|NZ_CP042997.1_2259242_2259695_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins	NA|389aa|down_9|NZ_CP042997.1_2259997_2261164_+	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	13	4037886-4037982	11	CRISPRCasFinder	no	csa3	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Type I-A	CGGTCGCCGGGCGGAGCCGGCCC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|568aa|up_8|NZ_CP042997.1_4028318_4030022_-,NA|371aa|up_2|NZ_CP042997.1_4034905_4036018_+,NA|68aa|down_3|NZ_CP042997.1_4042249_4042453_+	NA|221aa|up_9|NZ_CP042997.1_4027482_4028145_-	COG1926, COG1926, Predicted phosphoribosyltransferases [General function prediction only]	NA|568aa|up_8|NZ_CP042997.1_4028318_4030022_-	NA	NA|337aa|up_7|NZ_CP042997.1_4030119_4031130_-	TIGR01526, nadR_NMN_Atrans, nicotinamide-nucleotide adenylyltransferase, NadR type	NA|202aa|up_6|NZ_CP042997.1_4031126_4031732_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|319aa|up_5|NZ_CP042997.1_4031803_4032760_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|346aa|up_4|NZ_CP042997.1_4032756_4033794_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|289aa|up_3|NZ_CP042997.1_4034042_4034909_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|371aa|up_2|NZ_CP042997.1_4034905_4036018_+	NA	NA|356aa|up_1|NZ_CP042997.1_4036014_4037082_+	cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose	NA|175aa|up_0|NZ_CP042997.1_4037089_4037614_+	pfam00472, RF-1, RF-1 domain	NA|373aa|down_0|NZ_CP042997.1_4038191_4039310_+	TIGR04122, hypothetical_protein, putative exonuclease, DNA ligase-associated	NA|541aa|down_1|NZ_CP042997.1_4039306_4040929_+	PRK09247, PRK09247, ATP-dependent DNA ligase; Validated	NA|357aa|down_2|NZ_CP042997.1_4041114_4042185_+	smart00880, CHAD, The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family	NA|68aa|down_3|NZ_CP042997.1_4042249_4042453_+	NA	NA|583aa|down_4|NZ_CP042997.1_4042841_4044590_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|198aa|down_5|NZ_CP042997.1_4045070_4045664_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|352aa|down_6|NZ_CP042997.1_4045728_4046784_-	pfam11199, DUF2891, Protein of unknown function (DUF2891)	NA|334aa|down_7|NZ_CP042997.1_4046861_4047863_-	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]	NA|280aa|down_8|NZ_CP042997.1_4047984_4048824_-	cd19138, AKR_YeaE, Escherichia coli YeaE and similar proteins	NA|652aa|down_9|NZ_CP042997.1_4049431_4051387_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	14	4445320-4445685	5	CRT	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CTGGTANGGCTCCACNCGCTCCTCGGCGAC	30	0	0	NA	NA	NA	7	7	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|185aa|up_2|NZ_CP042997.1_4442535_4443090_+,NA|156aa|up_1|NZ_CP042997.1_4443526_4443994_+,NA|154aa|up_0|NZ_CP042997.1_4444559_4445021_+,NA|139aa|down_2|NZ_CP042997.1_4450156_4450573_+,NA|88aa|down_4|NZ_CP042997.1_4452020_4452284_-	NA|427aa|up_9|NZ_CP042997.1_4433109_4434390_-	pfam13795, HupE_UreJ_2, HupE / UreJ protein	NA|460aa|up_8|NZ_CP042997.1_4434397_4435777_-	pfam12006, DUF3500, Protein of unknown function (DUF3500)	NA|419aa|up_7|NZ_CP042997.1_4436077_4437334_+	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain	NA|496aa|up_6|NZ_CP042997.1_4438335_4439823_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|523aa|up_5|NZ_CP042997.1_4439842_4441411_-	cd03311, CIMS_C_terminal_like, CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like	NA|121aa|up_4|NZ_CP042997.1_4441432_4441795_-	COG2044, COG2044, Predicted peroxiredoxins [General function prediction only]	NA|58aa|up_3|NZ_CP042997.1_4441801_4441975_-	pfam01206, TusA, Sulfurtransferase TusA	NA|185aa|up_2|NZ_CP042997.1_4442535_4443090_+	NA	NA|156aa|up_1|NZ_CP042997.1_4443526_4443994_+	NA	NA|154aa|up_0|NZ_CP042997.1_4444559_4445021_+	NA	NA|332aa|down_0|NZ_CP042997.1_4447357_4448353_-	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion]	NA|467aa|down_1|NZ_CP042997.1_4448547_4449948_-	TIGR00911, High-affinity_methionine_permease, L-type amino acid transporter	NA|139aa|down_2|NZ_CP042997.1_4450156_4450573_+	NA	NA|474aa|down_3|NZ_CP042997.1_4450584_4452006_-	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane]	NA|88aa|down_4|NZ_CP042997.1_4452020_4452284_-	NA	NA|368aa|down_5|NZ_CP042997.1_4454441_4455545_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|238aa|down_6|NZ_CP042997.1_4455684_4456398_-	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only]	NA|381aa|down_7|NZ_CP042997.1_4456934_4458077_+	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement	NA|254aa|down_8|NZ_CP042997.1_4458154_4458916_-	PRK08317, PRK08317, hypothetical protein; Provisional	NA|450aa|down_9|NZ_CP042997.1_4458968_4460318_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	15	4902934-4903034	12	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GTGGGTCAGCGAAGCGCAGCCCACC	25	1	1	4902959-4903009	NZ_CP042997.1_4902997-4903047	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|449aa|up_6|NZ_CP042997.1_4898229_4899576_+,NA|60aa|up_2|NZ_CP042997.1_4901380_4901560_+,NA|185aa|up_1|NZ_CP042997.1_4901608_4902163_+,NA|136aa|down_4|NZ_CP042997.1_4908225_4908633_-,NA|276aa|down_5|NZ_CP042997.1_4909244_4910072_-	NA|1126aa|up_9|NZ_CP042997.1_4891630_4895008_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|516aa|up_8|NZ_CP042997.1_4895292_4896840_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|406aa|up_7|NZ_CP042997.1_4896858_4898076_+	pfam13424, TPR_12, Tetratricopeptide repeat	NA|449aa|up_6|NZ_CP042997.1_4898229_4899576_+	NA	NA|180aa|up_5|NZ_CP042997.1_4900038_4900578_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|119aa|up_4|NZ_CP042997.1_4900859_4901216_+	COG2442, COG2442, Uncharacterized conserved protein [Function unknown]	NA|58aa|up_3|NZ_CP042997.1_4901196_4901370_+	pfam18480, DUF5615, Domain of unknown function (DUF5615)	NA|60aa|up_2|NZ_CP042997.1_4901380_4901560_+	NA	NA|185aa|up_1|NZ_CP042997.1_4901608_4902163_+	NA	NA|187aa|up_0|NZ_CP042997.1_4902326_4902887_+	cd12108, Hr-like, Hemerythrin-like domain	NA|183aa|down_0|NZ_CP042997.1_4903094_4903643_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|150aa|down_1|NZ_CP042997.1_4904172_4904622_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|597aa|down_2|NZ_CP042997.1_4904861_4906652_+	pfam00931, NB-ARC, NB-ARC domain	NA|198aa|down_3|NZ_CP042997.1_4907635_4908229_-	pfam05685, Uma2, Putative restriction endonuclease	NA|136aa|down_4|NZ_CP042997.1_4908225_4908633_-	NA	NA|276aa|down_5|NZ_CP042997.1_4909244_4910072_-	NA	NA|553aa|down_6|NZ_CP042997.1_4911258_4912917_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|632aa|down_7|NZ_CP042997.1_4913177_4915073_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|307aa|down_8|NZ_CP042997.1_4917009_4917930_-	pfam00685, Sulfotransfer_1, Sulfotransferase domain	NA|455aa|down_9|NZ_CP042997.1_4918336_4919701_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	16	4959267-4959365	13	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CCTTCGCAAGGGGGAGAACCGGATTCGATCGCC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|244aa|up_8|NZ_CP042997.1_4948364_4949096_+,NA|66aa|up_7|NZ_CP042997.1_4949295_4949493_+,NA|249aa|down_0|NZ_CP042997.1_4959415_4960162_-,NA|68aa|down_1|NZ_CP042997.1_4960622_4960826_+,NA|155aa|down_5|NZ_CP042997.1_4967325_4967790_+,NA|149aa|down_7|NZ_CP042997.1_4969556_4970003_+	NA|249aa|up_9|NZ_CP042997.1_4947460_4948207_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|244aa|up_8|NZ_CP042997.1_4948364_4949096_+	NA	NA|66aa|up_7|NZ_CP042997.1_4949295_4949493_+	NA	NA|131aa|up_6|NZ_CP042997.1_4949497_4949890_+	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|359aa|up_5|NZ_CP042997.1_4949991_4951068_-	cd09620, CBM9_like_3, DOMON-like type 9 carbohydrate binding module	NA|466aa|up_4|NZ_CP042997.1_4951316_4952714_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|639aa|up_3|NZ_CP042997.1_4952835_4954752_-	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|443aa|up_2|NZ_CP042997.1_4954953_4956282_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|388aa|up_1|NZ_CP042997.1_4956283_4957447_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|443aa|up_0|NZ_CP042997.1_4957687_4959016_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|249aa|down_0|NZ_CP042997.1_4959415_4960162_-	NA	NA|68aa|down_1|NZ_CP042997.1_4960622_4960826_+	NA	NA|367aa|down_2|NZ_CP042997.1_4961034_4962135_+	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|1006aa|down_3|NZ_CP042997.1_4962673_4965691_+	pfam07593, UnbV_ASPIC, ASPIC and UnbV	NA|149aa|down_4|NZ_CP042997.1_4966249_4966696_-	PRK14900, valS, valyl-tRNA synthetase; Provisional	NA|155aa|down_5|NZ_CP042997.1_4967325_4967790_+	NA	NA|394aa|down_6|NZ_CP042997.1_4967931_4969113_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|149aa|down_7|NZ_CP042997.1_4969556_4970003_+	NA	NA|267aa|down_8|NZ_CP042997.1_4970064_4970865_+	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|385aa|down_9|NZ_CP042997.1_4970978_4972133_+	TIGR01836, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	17	4962421-4962566	14	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CAGGCCGAGGCGATCGAATTCACCCCCCTGTATCCCCCCTTCGTAAGGGGGGAA	54	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|249aa|up_2|NZ_CP042997.1_4959415_4960162_-,NA|68aa|up_1|NZ_CP042997.1_4960622_4960826_+,NA|155aa|down_2|NZ_CP042997.1_4967325_4967790_+,NA|149aa|down_4|NZ_CP042997.1_4969556_4970003_+	NA|131aa|up_9|NZ_CP042997.1_4949497_4949890_+	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|359aa|up_8|NZ_CP042997.1_4949991_4951068_-	cd09620, CBM9_like_3, DOMON-like type 9 carbohydrate binding module	NA|466aa|up_7|NZ_CP042997.1_4951316_4952714_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|639aa|up_6|NZ_CP042997.1_4952835_4954752_-	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|443aa|up_5|NZ_CP042997.1_4954953_4956282_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|388aa|up_4|NZ_CP042997.1_4956283_4957447_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|443aa|up_3|NZ_CP042997.1_4957687_4959016_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|249aa|up_2|NZ_CP042997.1_4959415_4960162_-	NA	NA|68aa|up_1|NZ_CP042997.1_4960622_4960826_+	NA	NA|367aa|up_0|NZ_CP042997.1_4961034_4962135_+	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|1006aa|down_0|NZ_CP042997.1_4962673_4965691_+	pfam07593, UnbV_ASPIC, ASPIC and UnbV	NA|149aa|down_1|NZ_CP042997.1_4966249_4966696_-	PRK14900, valS, valyl-tRNA synthetase; Provisional	NA|155aa|down_2|NZ_CP042997.1_4967325_4967790_+	NA	NA|394aa|down_3|NZ_CP042997.1_4967931_4969113_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|149aa|down_4|NZ_CP042997.1_4969556_4970003_+	NA	NA|267aa|down_5|NZ_CP042997.1_4970064_4970865_+	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|385aa|down_6|NZ_CP042997.1_4970978_4972133_+	TIGR01836, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit	NA|983aa|down_7|NZ_CP042997.1_4972337_4975286_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|436aa|down_8|NZ_CP042997.1_4975308_4976616_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|663aa|down_9|NZ_CP042997.1_4976956_4978945_-	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	18	5102000-5102104	15	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CCCCGTGGGAGCCGGCTCCGACCGGCGACCG	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|104aa|up_9|NZ_CP042997.1_5083325_5083637_+,NA|59aa|up_7|NZ_CP042997.1_5085270_5085447_+,NA|529aa|up_3|NZ_CP042997.1_5092939_5094526_+,NA|149aa|down_6|NZ_CP042997.1_5115762_5116209_-	NA|104aa|up_9|NZ_CP042997.1_5083325_5083637_+	NA	NA|461aa|up_8|NZ_CP042997.1_5083845_5085228_+	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|59aa|up_7|NZ_CP042997.1_5085270_5085447_+	NA	NA|271aa|up_6|NZ_CP042997.1_5086135_5086948_-	smart00271, DnaJ, DnaJ molecular chaperone homology domain	NA|357aa|up_5|NZ_CP042997.1_5090584_5091655_-	COG2834, LolA, Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane]	NA|189aa|up_4|NZ_CP042997.1_5091843_5092410_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|529aa|up_3|NZ_CP042997.1_5092939_5094526_+	NA	NA|1217aa|up_2|NZ_CP042997.1_5094813_5098464_-	pfam13514, AAA_27, AAA domain	NA|555aa|up_1|NZ_CP042997.1_5098843_5100508_-	pfam03577, Peptidase_C69, Peptidase family C69	NA|420aa|up_0|NZ_CP042997.1_5100579_5101839_-	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain	NA|150aa|down_0|NZ_CP042997.1_5102154_5102604_-	pfam12796, Ank_2, Ankyrin repeats (3 copies)	NA|857aa|down_1|NZ_CP042997.1_5102783_5105354_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|126aa|down_2|NZ_CP042997.1_5105578_5105956_+	TIGR04256, conserved_hypothetical_protein, GxxExxY protein	NA|428aa|down_3|NZ_CP042997.1_5106047_5107331_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|1662aa|down_4|NZ_CP042997.1_5107452_5112438_-	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain	NA|849aa|down_5|NZ_CP042997.1_5112698_5115245_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|149aa|down_6|NZ_CP042997.1_5115762_5116209_-	NA	NA|382aa|down_7|NZ_CP042997.1_5116583_5117729_-	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|690aa|down_8|NZ_CP042997.1_5118072_5120142_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|147aa|down_9|NZ_CP042997.1_5120157_5120598_-	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	19	5199241-5199340	16	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	AGAGGAGAAGGATCAGGGGAGAG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|69aa|up_7|NZ_CP042997.1_5190066_5190273_-,NA|72aa|up_6|NZ_CP042997.1_5190701_5190917_+,NA|72aa|up_5|NZ_CP042997.1_5190926_5191142_+,NA|135aa|up_2|NZ_CP042997.1_5195517_5195922_+,NA|310aa|up_0|NZ_CP042997.1_5198275_5199205_+,NA|151aa|down_4|NZ_CP042997.1_5206177_5206630_-,NA|170aa|down_6|NZ_CP042997.1_5207044_5207554_-,NA|136aa|down_7|NZ_CP042997.1_5207550_5207958_-,NA|196aa|down_8|NZ_CP042997.1_5208002_5208590_-,NA|101aa|down_9|NZ_CP042997.1_5208607_5208910_-	NA|385aa|up_9|NZ_CP042997.1_5187490_5188645_+	PRK13479, PRK13479, 2-aminoethylphosphonate--pyruvate transaminase; Provisional	NA|384aa|up_8|NZ_CP042997.1_5188811_5189963_-	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|69aa|up_7|NZ_CP042997.1_5190066_5190273_-	NA	NA|72aa|up_6|NZ_CP042997.1_5190701_5190917_+	NA	NA|72aa|up_5|NZ_CP042997.1_5190926_5191142_+	NA	NA|283aa|up_4|NZ_CP042997.1_5191216_5192065_-	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|808aa|up_3|NZ_CP042997.1_5192627_5195051_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|135aa|up_2|NZ_CP042997.1_5195517_5195922_+	NA	NA|556aa|up_1|NZ_CP042997.1_5196017_5197685_-	pfam02018, CBM_4_9, Carbohydrate binding domain	NA|310aa|up_0|NZ_CP042997.1_5198275_5199205_+	NA	NA|457aa|down_0|NZ_CP042997.1_5199401_5200772_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|429aa|down_1|NZ_CP042997.1_5201219_5202506_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|459aa|down_2|NZ_CP042997.1_5202918_5204295_-	cd05680, M20_dipept_like, uncharacterized M20 dipeptidase	NA|350aa|down_3|NZ_CP042997.1_5204833_5205883_+	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|151aa|down_4|NZ_CP042997.1_5206177_5206630_-	NA	NA|72aa|down_5|NZ_CP042997.1_5206712_5206928_-	COG3422, COG3422, Uncharacterized conserved protein [Function unknown]	NA|170aa|down_6|NZ_CP042997.1_5207044_5207554_-	NA	NA|136aa|down_7|NZ_CP042997.1_5207550_5207958_-	NA	NA|196aa|down_8|NZ_CP042997.1_5208002_5208590_-	NA	NA|101aa|down_9|NZ_CP042997.1_5208607_5208910_-	NA
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	20	5327316-5327428	17	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CCGGGCGAGCCTGGGAGGCGGCGAGCCCCGTGGCAGCCGGC	41	1	1	5327357-5327387	NZ_CP042997.1_5327429-5327459	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|694aa|up_5|NZ_CP042997.1_5298990_5301072_+,NA|260aa|up_3|NZ_CP042997.1_5312325_5313105_-,NA|265aa|up_2|NZ_CP042997.1_5313191_5313986_-,NA|137aa|down_0|NZ_CP042997.1_5327770_5328181_-,NA|79aa|down_2|NZ_CP042997.1_5328957_5329194_+,NA|82aa|down_3|NZ_CP042997.1_5329366_5329612_-,NA|98aa|down_5|NZ_CP042997.1_5330956_5331250_+,NA|281aa|down_7|NZ_CP042997.1_5334788_5335631_+,NA|93aa|down_9|NZ_CP042997.1_5336099_5336378_+	NA|387aa|up_9|NZ_CP042997.1_5293843_5295004_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|453aa|up_8|NZ_CP042997.1_5295360_5296719_+	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|371aa|up_7|NZ_CP042997.1_5296968_5298081_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|177aa|up_6|NZ_CP042997.1_5298117_5298648_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|694aa|up_5|NZ_CP042997.1_5298990_5301072_+	NA	NA|3543aa|up_4|NZ_CP042997.1_5301123_5311752_-	pfam05048, NosD, Periplasmic copper-binding protein (NosD)	NA|260aa|up_3|NZ_CP042997.1_5312325_5313105_-	NA	NA|265aa|up_2|NZ_CP042997.1_5313191_5313986_-	NA	NA|2897aa|up_1|NZ_CP042997.1_5314406_5323097_-	sd00042, LVIVD, LVIVD repeat	NA|199aa|up_0|NZ_CP042997.1_5323389_5323986_+	TIGR02984, Sig-70_plancto1, RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1	NA|137aa|down_0|NZ_CP042997.1_5327770_5328181_-	NA	NA|189aa|down_1|NZ_CP042997.1_5328170_5328737_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|79aa|down_2|NZ_CP042997.1_5328957_5329194_+	NA	NA|82aa|down_3|NZ_CP042997.1_5329366_5329612_-	NA	NA|135aa|down_4|NZ_CP042997.1_5329999_5330404_-	pfam11528, DUF3224, Protein of unknown function (DUF3224)	NA|98aa|down_5|NZ_CP042997.1_5330956_5331250_+	NA	NA|1069aa|down_6|NZ_CP042997.1_5331486_5334693_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|281aa|down_7|NZ_CP042997.1_5334788_5335631_+	NA	NA|130aa|down_8|NZ_CP042997.1_5335673_5336063_+	cd02226, cupin_YdbB-like, Bacillus subtilis YdbB and related proteins, cupin domain	NA|93aa|down_9|NZ_CP042997.1_5336099_5336378_+	NA
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	21	5740905-5741031	18	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GTCTTCTCTGTGTCCTCCGTGCCTCTGTGGTTAG	34	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|129aa|up_9|NZ_CP042997.1_5731646_5732033_+,NA|94aa|up_8|NZ_CP042997.1_5732059_5732341_-,NA	NA|129aa|up_9|NZ_CP042997.1_5731646_5732033_+	NA	NA|94aa|up_8|NZ_CP042997.1_5732059_5732341_-	NA	NA|615aa|up_7|NZ_CP042997.1_5732576_5734421_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|204aa|up_6|NZ_CP042997.1_5734939_5735551_+	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau	NA|508aa|up_5|NZ_CP042997.1_5735914_5737438_+	pfam01514, YscJ_FliF, Secretory protein of YscJ/FliF family	NA|194aa|up_4|NZ_CP042997.1_5737434_5738016_+	pfam01706, FliG_C, FliG C-terminal domain	NA|162aa|up_3|NZ_CP042997.1_5738059_5738545_+	pfam04347, FliO, Flagellar biosynthesis protein, FliO	NA|220aa|up_2|NZ_CP042997.1_5738826_5739486_+	pfam00813, FliP, FliP family	NA|89aa|up_1|NZ_CP042997.1_5739501_5739768_+	pfam01313, Bac_export_3, Bacterial export proteins, family 3	NA|273aa|up_0|NZ_CP042997.1_5739933_5740752_+	pfam01311, Bac_export_1, Bacterial export proteins, family 1	NA|352aa|down_0|NZ_CP042997.1_5741049_5742105_+	pfam01312, Bac_export_2, FlhB HrpN YscU SpaS Family	NA|512aa|down_1|NZ_CP042997.1_5742570_5744106_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|327aa|down_2|NZ_CP042997.1_5744161_5745142_-	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|361aa|down_3|NZ_CP042997.1_5745383_5746466_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|882aa|down_4|NZ_CP042997.1_5747153_5749799_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|202aa|down_5|NZ_CP042997.1_5749910_5750516_-	TIGR02984, Sig-70_plancto1, RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1	NA|360aa|down_6|NZ_CP042997.1_5751291_5752371_+	pfam11949, DUF3466, Protein of unknown function (DUF3466)	NA|1147aa|down_7|NZ_CP042997.1_5752744_5756185_+	pfam13229, Beta_helix, Right handed beta helix region	NA|782aa|down_8|NZ_CP042997.1_5756540_5758886_+	pfam00771, FHIPEP, FHIPEP family	NA|383aa|down_9|NZ_CP042997.1_5758953_5760102_+	PRK05703, flhF, flagellar biosynthesis protein FlhF
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	22	5825619-5825749	19	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CGCCGGCCGAGGCTCACGCGGTCGCCGGACGGAGCCGGC	39	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|452aa|up_5|NZ_CP042997.1_5814227_5815583_-,NA|189aa|down_0|NZ_CP042997.1_5825914_5826481_+,NA|124aa|down_4|NZ_CP042997.1_5832615_5832987_+,NA|488aa|down_8|NZ_CP042997.1_5836645_5838109_+	NA|282aa|up_9|NZ_CP042997.1_5810483_5811329_+	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription]	NA|251aa|up_8|NZ_CP042997.1_5811425_5812178_-	COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|165aa|up_7|NZ_CP042997.1_5812533_5813028_+	pfam16242, Pyrid_ox_like, Pyridoxamine 5'-phosphate oxidase like	NA|371aa|up_6|NZ_CP042997.1_5813082_5814195_-	pfam14871, GHL6, Hypothetical glycosyl hydrolase 6	NA|452aa|up_5|NZ_CP042997.1_5814227_5815583_-	NA	NA|573aa|up_4|NZ_CP042997.1_5817397_5819116_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|718aa|up_3|NZ_CP042997.1_5819286_5821440_-	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|137aa|up_2|NZ_CP042997.1_5821452_5821863_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|472aa|up_1|NZ_CP042997.1_5822075_5823491_+	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|654aa|up_0|NZ_CP042997.1_5823508_5825470_-	pfam12044, Metallopep, Putative peptidase family	NA|189aa|down_0|NZ_CP042997.1_5825914_5826481_+	NA	NA|403aa|down_1|NZ_CP042997.1_5826510_5827719_+	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|789aa|down_2|NZ_CP042997.1_5827864_5830231_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|630aa|down_3|NZ_CP042997.1_5830314_5832204_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|124aa|down_4|NZ_CP042997.1_5832615_5832987_+	NA	NA|611aa|down_5|NZ_CP042997.1_5833111_5834944_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|172aa|down_6|NZ_CP042997.1_5834909_5835425_-	PRK07757, PRK07757, N-acetyltransferase	NA|233aa|down_7|NZ_CP042997.1_5835616_5836315_-	cd14529, TpbA-like, bacterial protein tyrosine and dual-specificity phosphatases related to Pseudomonas aeruginosa TpbA	NA|488aa|down_8|NZ_CP042997.1_5836645_5838109_+	NA	NA|73aa|down_9|NZ_CP042997.1_5839310_5839529_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	23	6013036-6013141	20	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CGGTCGCCGGGCGGAGCCGGCTCCCACGGGGC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|128aa|up_4|NZ_CP042997.1_6007585_6007969_+,NA|761aa|down_0|NZ_CP042997.1_6013376_6015659_-,NA|888aa|down_3|NZ_CP042997.1_6020056_6022720_+	NA|372aa|up_9|NZ_CP042997.1_6000281_6001397_+	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	NA|475aa|up_8|NZ_CP042997.1_6001369_6002794_+	COG3202, COG3202, ATP/ADP translocase [Energy production and conversion]	NA|257aa|up_7|NZ_CP042997.1_6002825_6003596_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|380aa|up_6|NZ_CP042997.1_6003750_6004890_-	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|555aa|up_5|NZ_CP042997.1_6004957_6006622_-	pfam14717, DUF4465, Domain of unknown function (DUF4465)	NA|128aa|up_4|NZ_CP042997.1_6007585_6007969_+	NA	NA|235aa|up_3|NZ_CP042997.1_6007996_6008701_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|480aa|up_2|NZ_CP042997.1_6008733_6010173_-	pfam12040, DUF3526, Domain of unknown function (DUF3526)	NA|474aa|up_1|NZ_CP042997.1_6010189_6011611_-	pfam12040, DUF3526, Domain of unknown function (DUF3526)	NA|343aa|up_0|NZ_CP042997.1_6011660_6012689_-	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|761aa|down_0|NZ_CP042997.1_6013376_6015659_-	NA	NA|920aa|down_1|NZ_CP042997.1_6015985_6018745_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|297aa|down_2|NZ_CP042997.1_6018949_6019840_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|888aa|down_3|NZ_CP042997.1_6020056_6022720_+	NA	NA|676aa|down_4|NZ_CP042997.1_6023249_6025277_+	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|249aa|down_5|NZ_CP042997.1_6025200_6025947_-	COG3571, COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]	NA|126aa|down_6|NZ_CP042997.1_6025981_6026359_-	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins	NA|380aa|down_7|NZ_CP042997.1_6026798_6027938_-	cd08015, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily	NA|406aa|down_8|NZ_CP042997.1_6029128_6030346_+	pfam11175, DUF2961, Protein of unknown function (DUF2961)	NA|322aa|down_9|NZ_CP042997.1_6030661_6031627_-	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	24	7007785-7007908	21	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	AGGTCCTTGGAGTTGACCACGCCGTCCCCGTTGG	34	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|136aa|up_7|NZ_CP042997.1_6993193_6993601_+,NA|65aa|down_0|NZ_CP042997.1_7010061_7010256_+,NA|53aa|down_1|NZ_CP042997.1_7010356_7010515_+,NA|368aa|down_2|NZ_CP042997.1_7010695_7011799_-,NA|126aa|down_3|NZ_CP042997.1_7011773_7012151_-	NA|345aa|up_9|NZ_CP042997.1_6987980_6989015_-	sd00006, TPR, Tetratricopeptide repeat	NA|451aa|up_8|NZ_CP042997.1_6989494_6990847_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|136aa|up_7|NZ_CP042997.1_6993193_6993601_+	NA	NA|403aa|up_6|NZ_CP042997.1_6993854_6995063_-	pfam07592, DDE_Tnp_ISAZ013, Rhodopirellula transposase DDE domain	NA|375aa|up_5|NZ_CP042997.1_6995080_6996206_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|273aa|up_4|NZ_CP042997.1_6996381_6997201_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|376aa|up_3|NZ_CP042997.1_6997572_6998700_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|462aa|up_2|NZ_CP042997.1_6999076_7000462_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|125aa|up_1|NZ_CP042997.1_7000780_7001155_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|146aa|up_0|NZ_CP042997.1_7001295_7001733_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|65aa|down_0|NZ_CP042997.1_7010061_7010256_+	NA	NA|53aa|down_1|NZ_CP042997.1_7010356_7010515_+	NA	NA|368aa|down_2|NZ_CP042997.1_7010695_7011799_-	NA	NA|126aa|down_3|NZ_CP042997.1_7011773_7012151_-	NA	NA|144aa|down_4|NZ_CP042997.1_7012427_7012859_+	pfam13646, HEAT_2, HEAT repeats	NA|323aa|down_5|NZ_CP042997.1_7012855_7013824_+	pfam02405, MlaE, Permease MlaE	NA|430aa|down_6|NZ_CP042997.1_7013894_7015184_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|95aa|down_7|NZ_CP042997.1_7015431_7015716_+	pfam04316, FlgM, Anti-sigma-28 factor, FlgM	NA|524aa|down_8|NZ_CP042997.1_7015979_7017551_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|324aa|down_9|NZ_CP042997.1_7017655_7018627_+	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	25	8357450-8357547	22	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CAGGGTCAACCCTCGGGGTCAGGTCA	26	1	1	8357476-8357521	NZ_CP042997.1_8357547-8357592	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|232aa|up_0|NZ_CP042997.1_8356621_8357317_+,NA	NA|473aa|up_9|NZ_CP042997.1_8345352_8346771_+	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]	NA|416aa|up_8|NZ_CP042997.1_8346786_8348034_+	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases	NA|534aa|up_7|NZ_CP042997.1_8348101_8349703_+	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)	NA|356aa|up_6|NZ_CP042997.1_8349699_8350767_+	cd07984, LPLAT_LABLAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like	NA|231aa|up_5|NZ_CP042997.1_8352835_8353528_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|196aa|up_4|NZ_CP042997.1_8353698_8354286_+	TIGR03067, Planc_TIGR03067, Planctomycetes uncharacterized domain TIGR03067	NA|103aa|up_3|NZ_CP042997.1_8354260_8354569_+	PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional	NA|227aa|up_2|NZ_CP042997.1_8354698_8355379_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|144aa|up_1|NZ_CP042997.1_8355745_8356177_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|232aa|up_0|NZ_CP042997.1_8356621_8357317_+	NA	NA|1049aa|down_0|NZ_CP042997.1_8357614_8360761_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|481aa|down_1|NZ_CP042997.1_8361344_8362787_+	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase	NA|148aa|down_2|NZ_CP042997.1_8363337_8363781_-	sd00006, TPR, Tetratricopeptide repeat	NA|393aa|down_3|NZ_CP042997.1_8364149_8365328_+	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|790aa|down_4|NZ_CP042997.1_8365491_8367861_+	TIGR03788, marine_srt_targ, marine proteobacterial sortase target protein	NA|188aa|down_5|NZ_CP042997.1_8367933_8368497_-	COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|229aa|down_6|NZ_CP042997.1_8368878_8369565_+	pfam06439, DUF1080, Domain of Unknown Function (DUF1080)	NA|177aa|down_7|NZ_CP042997.1_8369655_8370186_-	PRK00522, tpx, thiol peroxidase	NA|614aa|down_8|NZ_CP042997.1_8370376_8372218_+	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|194aa|down_9|NZ_CP042997.1_8372877_8373459_+	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	26	9179229-9179327	23	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CGTTCATCATCGTGGTGCCTCCCCGGGC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|300aa|up_9|NZ_CP042997.1_9166795_9167695_+,NA|79aa|up_2|NZ_CP042997.1_9176278_9176515_+,NA|93aa|down_3|NZ_CP042997.1_9182570_9182849_-,NA|116aa|down_6|NZ_CP042997.1_9185077_9185425_-,NA|159aa|down_7|NZ_CP042997.1_9185624_9186101_+	NA|300aa|up_9|NZ_CP042997.1_9166795_9167695_+	NA	NA|652aa|up_8|NZ_CP042997.1_9167992_9169948_+	cd07544, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|428aa|up_7|NZ_CP042997.1_9170090_9171374_-	pfam13229, Beta_helix, Right handed beta helix region	NA|403aa|up_6|NZ_CP042997.1_9171650_9172859_+	pfam07994, NAD_binding_5, Myo-inositol-1-phosphate synthase	NA|285aa|up_5|NZ_CP042997.1_9172858_9173713_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|300aa|up_4|NZ_CP042997.1_9173783_9174683_+	cd13964, PT_UbiA_1, UbiA family of prenyltransferases (PTases), Unknown subgroup	NA|305aa|up_3|NZ_CP042997.1_9174705_9175620_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|79aa|up_2|NZ_CP042997.1_9176278_9176515_+	NA	NA|375aa|up_1|NZ_CP042997.1_9176628_9177753_+	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|279aa|up_0|NZ_CP042997.1_9178079_9178916_-	COG1099, COG1099, Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]	NA|453aa|down_0|NZ_CP042997.1_9179626_9180985_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|90aa|down_1|NZ_CP042997.1_9181076_9181346_+	pfam09413, DUF2007, Putative prokaryotic signal transducing protein	NA|394aa|down_2|NZ_CP042997.1_9181377_9182559_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|93aa|down_3|NZ_CP042997.1_9182570_9182849_-	NA	NA|260aa|down_4|NZ_CP042997.1_9183059_9183839_+	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|333aa|down_5|NZ_CP042997.1_9183880_9184879_-	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559)	NA|116aa|down_6|NZ_CP042997.1_9185077_9185425_-	NA	NA|159aa|down_7|NZ_CP042997.1_9185624_9186101_+	NA	NA|883aa|down_8|NZ_CP042997.1_9186224_9188873_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|646aa|down_9|NZ_CP042997.1_9189351_9191289_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	27	9331219-9331320	24	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GCTCGCTCATCGACGCTCGCTCC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|183aa|up_0|NZ_CP042997.1_9330485_9331034_+,NA|428aa|down_0|NZ_CP042997.1_9331480_9332764_-,NA|186aa|down_2|NZ_CP042997.1_9334625_9335183_+,NA|426aa|down_5|NZ_CP042997.1_9339732_9341010_+,NA|123aa|down_6|NZ_CP042997.1_9341308_9341677_+,NA|141aa|down_7|NZ_CP042997.1_9342270_9342693_-	NA|402aa|up_9|NZ_CP042997.1_9313671_9314877_-	pfam14486, DUF4432, Domain of unknown function (DUF4432)	NA|386aa|up_8|NZ_CP042997.1_9315172_9316330_+	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|921aa|up_7|NZ_CP042997.1_9316411_9319174_+	COG5164, SPT5, Transcription elongation factor [Transcription]	NA|421aa|up_6|NZ_CP042997.1_9319316_9320579_-	pfam13646, HEAT_2, HEAT repeats	NA|318aa|up_5|NZ_CP042997.1_9320581_9321535_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|421aa|up_4|NZ_CP042997.1_9321631_9322894_+	COG3379, COG3379, Uncharacterized conserved protein [Function unknown]	NA|1069aa|up_3|NZ_CP042997.1_9323143_9326350_-	TIGR02603, CxxCH_TIGR02603, putative heme-binding domain, Pirellula/Verrucomicrobium type	NA|547aa|up_2|NZ_CP042997.1_9326483_9328124_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|638aa|up_1|NZ_CP042997.1_9328609_9330523_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|183aa|up_0|NZ_CP042997.1_9330485_9331034_+	NA	NA|428aa|down_0|NZ_CP042997.1_9331480_9332764_-	NA	NA|480aa|down_1|NZ_CP042997.1_9333017_9334457_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|186aa|down_2|NZ_CP042997.1_9334625_9335183_+	NA	NA|110aa|down_3|NZ_CP042997.1_9335544_9335874_+	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase	NA|1129aa|down_4|NZ_CP042997.1_9336107_9339494_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|426aa|down_5|NZ_CP042997.1_9339732_9341010_+	NA	NA|123aa|down_6|NZ_CP042997.1_9341308_9341677_+	NA	NA|141aa|down_7|NZ_CP042997.1_9342270_9342693_-	NA	NA|1089aa|down_8|NZ_CP042997.1_9342820_9346087_-	pfam13502, AsmA_2, AsmA-like C-terminal region	NA|482aa|down_9|NZ_CP042997.1_9346151_9347597_-	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	28	9400035-9400132	25	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GCGGAGCCGGCTCCCACGGGGCGG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|73aa|up_7|NZ_CP042997.1_9388274_9388493_-,NA|280aa|up_5|NZ_CP042997.1_9391055_9391895_+,NA|139aa|down_0|NZ_CP042997.1_9400597_9401014_+,NA|116aa|down_2|NZ_CP042997.1_9405113_9405461_+,NA|122aa|down_4|NZ_CP042997.1_9407687_9408053_+,NA|118aa|down_7|NZ_CP042997.1_9411372_9411726_+	NA|1099aa|up_9|NZ_CP042997.1_9383887_9387184_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|305aa|up_8|NZ_CP042997.1_9387287_9388202_-	pfam04015, DUF362, Domain of unknown function (DUF362)	NA|73aa|up_7|NZ_CP042997.1_9388274_9388493_-	NA	NA|167aa|up_6|NZ_CP042997.1_9388729_9389230_+	pfam12867, DinB_2, DinB superfamily	NA|280aa|up_5|NZ_CP042997.1_9391055_9391895_+	NA	NA|644aa|up_4|NZ_CP042997.1_9391986_9393918_+	TIGR00475, Selenocysteine-specific_elongation_factor, selenocysteine-specific elongation factor SelB	NA|395aa|up_3|NZ_CP042997.1_9394366_9395551_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|71aa|up_2|NZ_CP042997.1_9396125_9396338_-	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|247aa|up_1|NZ_CP042997.1_9396742_9397483_+	cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs	NA|462aa|up_0|NZ_CP042997.1_9397875_9399261_-	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases	NA|139aa|down_0|NZ_CP042997.1_9400597_9401014_+	NA	NA|1267aa|down_1|NZ_CP042997.1_9401276_9405077_+	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase	NA|116aa|down_2|NZ_CP042997.1_9405113_9405461_+	NA	NA|528aa|down_3|NZ_CP042997.1_9405663_9407247_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|122aa|down_4|NZ_CP042997.1_9407687_9408053_+	NA	NA|729aa|down_5|NZ_CP042997.1_9408072_9410259_-	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|213aa|down_6|NZ_CP042997.1_9410490_9411129_+	pfam04468, PSP1, PSP1 C-terminal conserved region	NA|118aa|down_7|NZ_CP042997.1_9411372_9411726_+	NA	NA|325aa|down_8|NZ_CP042997.1_9411712_9412687_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|819aa|down_9|NZ_CP042997.1_9413548_9416005_+	pfam07944, Glyco_hydro_127, Beta-L-arabinofuranosidase, GH127
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	29	9726696-9726797	26	CRISPRCasFinder	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	CCTCTGTGCCTCTGTGGTTAGCTATTCTCATCATCC	36	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|112aa|up_2|NZ_CP042997.1_9724146_9724482_+,NA|50aa|down_2|NZ_CP042997.1_9731346_9731496_+	NA|218aa|up_9|NZ_CP042997.1_9709606_9710260_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|241aa|up_8|NZ_CP042997.1_9710569_9711292_+	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains	NA|281aa|up_7|NZ_CP042997.1_9711363_9712206_-	TIGR02997, RNA_polymerase_sigma_subunit_sigma70/sigma32, RNA polymerase sigma factor, cyanobacterial RpoD-like family	NA|205aa|up_6|NZ_CP042997.1_9712202_9712817_-	TIGR02984, Sig-70_plancto1, RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1	NA|1644aa|up_5|NZ_CP042997.1_9712953_9717885_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|1695aa|up_4|NZ_CP042997.1_9718625_9723710_+	pfam07587, PSD1, Protein of unknown function (DUF1553)	NA|139aa|up_3|NZ_CP042997.1_9723728_9724145_+	pfam05168, HEPN, HEPN domain	NA|112aa|up_2|NZ_CP042997.1_9724146_9724482_+	NA	NA|497aa|up_1|NZ_CP042997.1_9724516_9726007_+	pfam07394, DUF1501, Protein of unknown function (DUF1501)	NA|161aa|up_0|NZ_CP042997.1_9726017_9726500_+	TIGR03067, Planc_TIGR03067, Planctomycetes uncharacterized domain TIGR03067	NA|424aa|down_0|NZ_CP042997.1_9727135_9728407_-	pfam04015, DUF362, Domain of unknown function (DUF362)	NA|810aa|down_1|NZ_CP042997.1_9728502_9730932_-	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain	NA|50aa|down_2|NZ_CP042997.1_9731346_9731496_+	NA	NA|314aa|down_3|NZ_CP042997.1_9731778_9732720_-	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]	NA|213aa|down_4|NZ_CP042997.1_9732728_9733367_-	cd05540, UreG, urease accessory protein UreG	NA|230aa|down_5|NZ_CP042997.1_9733399_9734089_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|192aa|down_6|NZ_CP042997.1_9734138_9734714_-	PRK14711, ureE, urease accessory protein UreE; Provisional	NA|574aa|down_7|NZ_CP042997.1_9734754_9736476_-	PRK13207, ureC, urease subunit alpha; Reviewed	NA|168aa|down_8|NZ_CP042997.1_9736502_9737006_-	pfam00699, Urease_beta, Urease beta subunit	NA|101aa|down_9|NZ_CP042997.1_9737053_9737356_-	pfam00547, Urease_gamma, Urease, gamma subunit
GCF_008087625.1_ASM808762v1	NZ_CP042997	Aquisphaera giovannonii strain OJF2 chromosome, complete genome	30	10311366-10311572	2	PILER-CR	no		csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	Orphan	GGCCGGCGGCGGCATCTGGAACTACGGGACGGCGACCCT	39	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DEDDh,WYL,PD-DExK,DinG	NA|272aa|up_8|NZ_CP042997.1_10292716_10293532_+,NA|178aa|up_7|NZ_CP042997.1_10293594_10294128_-,NA|515aa|up_2|NZ_CP042997.1_10304383_10305928_+,NA|512aa|up_1|NZ_CP042997.1_10306116_10307652_+,NA|382aa|down_0|NZ_CP042997.1_10318143_10319289_+,NA|81aa|down_1|NZ_CP042997.1_10319479_10319722_+,NA|152aa|down_3|NZ_CP042997.1_10320247_10320703_+	NA|400aa|up_9|NZ_CP042997.1_10291387_10292587_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|272aa|up_8|NZ_CP042997.1_10292716_10293532_+	NA	NA|178aa|up_7|NZ_CP042997.1_10293594_10294128_-	NA	NA|254aa|up_6|NZ_CP042997.1_10294222_10294984_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|213aa|up_5|NZ_CP042997.1_10295195_10295834_+	TIGR02984, Sig-70_plancto1, RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1	NA|1651aa|up_4|NZ_CP042997.1_10295837_10300790_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|235aa|up_3|NZ_CP042997.1_10301256_10301961_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|515aa|up_2|NZ_CP042997.1_10304383_10305928_+	NA	NA|512aa|up_1|NZ_CP042997.1_10306116_10307652_+	NA	NA|385aa|up_0|NZ_CP042997.1_10307976_10309131_+	pfam16261, DUF4915, Domain of unknown function (DUF4915)	NA|382aa|down_0|NZ_CP042997.1_10318143_10319289_+	NA	NA|81aa|down_1|NZ_CP042997.1_10319479_10319722_+	NA	NA|150aa|down_2|NZ_CP042997.1_10319721_10320171_+	cd09854, PIN_VapC-like, VapC-like PIN domains of VapC and Smg6 ribonucleases, ribosome assembly factor NOB1, rRNA-processing protein Fcf1, Archaeoglobus fulgidus AF0591 protein, and homologs	NA|152aa|down_3|NZ_CP042997.1_10320247_10320703_+	NA	NA|1194aa|down_4|NZ_CP042997.1_10320857_10324439_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|874aa|down_5|NZ_CP042997.1_10324614_10327236_-	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|153aa|down_6|NZ_CP042997.1_10327375_10327834_-	pfam05258, DUF721, Protein of unknown function (DUF721)	NA|374aa|down_7|NZ_CP042997.1_10328056_10329178_-	cd00140, beta_clamp, Beta clamp domain	NA|545aa|down_8|NZ_CP042997.1_10330277_10331912_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|399aa|down_9|NZ_CP042997.1_10332016_10333213_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system
