assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008124005.1_ASM812400v1	NZ_CP043217	Escherichia coli O80:H26 strain EC-107 chromosome, complete genome	1	1392768-1392894	1	CRISPRCasFinder	no		cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	39	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|395aa|up_9|NZ_CP043217.1_1371675_1372860_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|259aa|up_8|NZ_CP043217.1_1372933_1373710_-	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|up_7|NZ_CP043217.1_1373714_1375364_-	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|1465aa|up_6|NZ_CP043217.1_1375364_1379759_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|208aa|up_5|NZ_CP043217.1_1379902_1380526_-	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|563aa|up_4|NZ_CP043217.1_1380522_1382211_-	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_3|NZ_CP043217.1_1382359_1384987_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_2|NZ_CP043217.1_1385133_1385856_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|1251aa|up_1|NZ_CP043217.1_1385983_1389736_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|762aa|up_0|NZ_CP043217.1_1390431_1392717_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|NZ_CP043217.1_1392950_1394081_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|NZ_CP043217.1_1394080_1394335_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|NZ_CP043217.1_1394388_1395039_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|359aa|down_3|NZ_CP043217.1_1395501_1396578_-	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|453aa|down_4|NZ_CP043217.1_1396582_1397941_-	PRK11273, glpT, glycerol-3-phosphate transporter	NA|543aa|down_5|NZ_CP043217.1_1398213_1399842_+	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|420aa|down_6|NZ_CP043217.1_1399831_1401091_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|397aa|down_7|NZ_CP043217.1_1401087_1402278_+	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|300aa|down_8|NZ_CP043217.1_1402470_1403370_+	PRK09956, PRK09956, ISNCY family transposase	NA|62aa|down_9|NZ_CP043217.1_1403382_1403568_+	PRK09956, PRK09956, ISNCY family transposase
GCF_008124005.1_ASM812400v1	NZ_CP043217	Escherichia coli O80:H26 strain EC-107 chromosome, complete genome	2	1908011-1908155	2	CRISPRCasFinder	no	csa3	cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-A	CACAATGCCTGATGCGACGCTGGAGCGTCTTATCATGCCTACAAA	45	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|150aa|up_9|NZ_CP043217.1_1899002_1899452_+	pfam06610, AlaE, L-alanine exporter	NA|115aa|up_8|NZ_CP043217.1_1899488_1899833_-	PRK10556, PRK10556, hypothetical protein; Provisional	NA|110aa|up_7|NZ_CP043217.1_1899984_1900314_+	PRK10132, PRK10132, hypothetical protein; Provisional	NA|82aa|up_6|NZ_CP043217.1_1900561_1900807_+	PRK10329, PRK10329, glutaredoxin-like protein NrdH	NA|137aa|up_5|NZ_CP043217.1_1900803_1901214_+	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|715aa|up_4|NZ_CP043217.1_1901186_1903331_+	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|320aa|up_3|NZ_CP043217.1_1903340_1904300_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|401aa|up_2|NZ_CP043217.1_1904652_1905855_+	PRK10070, PRK10070, proline/glycine betaine ABC transporter ATP-binding protein ProV	NA|355aa|up_1|NZ_CP043217.1_1905847_1906912_+	PRK10952, PRK10952, proline/glycine betaine ABC transporter permease ProW	NA|331aa|up_0|NZ_CP043217.1_1906969_1907962_+	PRK11119, proX, proline/glycine betaine ABC transporter substrate-binding protein ProX	NA|395aa|down_0|NZ_CP043217.1_1908264_1909449_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|246aa|down_1|NZ_CP043217.1_1909572_1910310_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|112aa|down_2|NZ_CP043217.1_1910299_1910635_+	PRK10408, PRK10408, L-valine transporter subunit YgaH	NA|177aa|down_3|NZ_CP043217.1_1910725_1911256_+	PRK10870, PRK10870, transcriptional repressor MprA; Provisional	NA|391aa|down_4|NZ_CP043217.1_1911382_1912555_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|513aa|down_5|NZ_CP043217.1_1912571_1914110_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|172aa|down_6|NZ_CP043217.1_1914173_1914689_-	PRK02260, PRK02260, S-ribosylhomocysteine lyase	NA|519aa|down_7|NZ_CP043217.1_1914838_1916395_-	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional	NA|143aa|down_8|NZ_CP043217.1_1916467_1916896_-	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|189aa|down_9|NZ_CP043217.1_1916892_1917459_-	PRK10725, PRK10725, fructose-1-phosphate/6-phosphogluconate phosphatase
GCF_008124005.1_ASM812400v1	NZ_CP043217	Escherichia coli O80:H26 strain EC-107 chromosome, complete genome	3	1977596-1978356	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	12,12,10	12	TypeI-E	cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA|34aa|down_5|NZ_CP043217.1_1982004_1982106_-	NA|254aa|up_9|NZ_CP043217.1_1969469_1970231_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP043217.1_1970211_1971261_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP043217.1_1971257_1971737_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP043217.1_1971736_1972447_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP043217.1_1972465_1972777_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP043217.1_1972970_1973294_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP043217.1_1973343_1973949_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP043217.1_1973948_1975376_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP043217.1_1975377_1976286_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP043217.1_1976537_1977575_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|95aa|down_0|NZ_CP043217.1_1978461_1978746_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|NZ_CP043217.1_1978747_1979665_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|200aa|down_2|NZ_CP043217.1_1979680_1980280_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|225aa|down_3|NZ_CP043217.1_1980266_1980941_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|360aa|down_4|NZ_CP043217.1_1980943_1982023_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	NA|34aa|down_5|NZ_CP043217.1_1982004_1982106_-	NA	NA|405aa|down_6|NZ_CP043217.1_1982071_1983285_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cse2gr11|161aa|down_7|NZ_CP043217.1_1983360_1983843_-	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|503aa|down_8|NZ_CP043217.1_1983835_1985344_-	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	NA|261aa|down_9|NZ_CP043217.1_1986010_1986793_-	PRK09183, PRK09183, transposase/IS protein; Provisional
GCF_008124005.1_ASM812400v1	NZ_CP043217	Escherichia coli O80:H26 strain EC-107 chromosome, complete genome	4	2007178-2007633	2,4,2	CRT,CRISPRCasFinder,PILER-CR	no	cas3	cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACAC,GGTTTATCCCCGCTGGCGCGGGGAACAC,GGTTTATCCCCGCTGGCGCGGGGAACAC	29,28,28	0	0	NA	NA	I-E:I-E:I-E	7,7,6	7	Unclear	cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA|47aa|down_1|NZ_CP043217.1_2008782_2008923_+	NA|424aa|up_9|NZ_CP043217.1_1995821_1997093_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP043217.1_1997083_1997344_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP043217.1_1997360_1997936_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP043217.1_1998083_1998944_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP043217.1_1998940_1999720_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP043217.1_1999697_2001035_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP043217.1_2001128_2002583_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP043217.1_2002652_2003438_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP043217.1_2003756_2005034_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP043217.1_2005060_2006539_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP043217.1_2007972_2008644_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_CP043217.1_2008782_2008923_+	NA	NA|291aa|down_2|NZ_CP043217.1_2008936_2009809_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_3|NZ_CP043217.1_2009868_2011167_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_4|NZ_CP043217.1_2011254_2012892_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_5|NZ_CP043217.1_2013119_2013911_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_6|NZ_CP043217.1_2013981_2014317_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_7|NZ_CP043217.1_2014316_2014565_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_8|NZ_CP043217.1_2014642_2016877_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_9|NZ_CP043217.1_2016924_2018226_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
GCF_008124005.1_ASM812400v1	NZ_CP043217	Escherichia coli O80:H26 strain EC-107 chromosome, complete genome	5	4352160-4352256	5	CRISPRCasFinder	no		cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	GCTTGACGCGTCTTATCAGGCCTACAA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|454aa|up_9|NZ_CP043217.1_4339940_4341302_+	PRK08044, PRK08044, allantoinase AllB	NA|434aa|up_8|NZ_CP043217.1_4341358_4342660_+	PRK11412, PRK11412, uracil/xanthine transporter	NA|382aa|up_7|NZ_CP043217.1_4342681_4343827_+	PRK09932, PRK09932, glycerate 3-kinase	NA|262aa|up_6|NZ_CP043217.1_4344054_4344840_-	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|412aa|up_5|NZ_CP043217.1_4344850_4346086_-	TIGR03176, AllC, allantoate amidohydrolase	NA|350aa|up_4|NZ_CP043217.1_4346107_4347157_-	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|556aa|up_3|NZ_CP043217.1_4347473_4349141_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|420aa|up_2|NZ_CP043217.1_4349150_4350410_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|272aa|up_1|NZ_CP043217.1_4350420_4351236_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|298aa|up_0|NZ_CP043217.1_4351232_4352126_+	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|356aa|down_0|NZ_CP043217.1_4352320_4353388_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|170aa|down_1|NZ_CP043217.1_4353384_4353894_-	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|241aa|down_2|NZ_CP043217.1_4354011_4354734_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|165aa|down_3|NZ_CP043217.1_4354736_4355231_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|462aa|down_4|NZ_CP043217.1_4355404_4356790_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|174aa|down_5|NZ_CP043217.1_4356825_4357347_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|71aa|down_6|NZ_CP043217.1_4357454_4357667_-	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|289aa|down_7|NZ_CP043217.1_4357668_4358535_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|181aa|down_8|NZ_CP043217.1_4359005_4359548_+	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|231aa|down_9|NZ_CP043217.1_4359767_4360460_+	PRK15195, PRK15195, molecular chaperone FimC
