The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP036523	[Clostridium] hiranonis strain DSM 13275 chromosome, complete genome	2521899	369549	375442	2521899		Streptococcus_phage(33.33%)	6	NA	NA
WP_006439013.1|369549_370281_+	methyltransferase domain-containing protein	NA	A0A0B5IWU9	Pandoravirus	27.4	1.1e-06
WP_006439014.1|370382_371219_+	DNA adenine methylase	NA	A0A1S5PRR3	Streptococcus_phage	43.8	1.3e-56
WP_006439015.1|371223_372027_+	site-specific DNA-methyltransferase	NA	M1Q227	Streptococcus_phage	32.5	1.5e-25
WP_006439016.1|372016_372883_+	type II restriction endonuclease	NA	A0A2H4JAL2	uncultured_Caudovirales_phage	29.8	2.3e-27
WP_006439017.1|372900_374367_+	Eco57I restriction-modification methylase domain-containing protein	NA	A0A1J0F9H0	Only_Syngen_Nebraska_virus	23.4	9.0e-08
WP_040410180.1|374332_375442_+	DUF262 domain-containing protein	NA	A0A0R6PKN1	Moraxella_phage	31.1	6.8e-16
>prophage 2
NZ_CP036523	[Clostridium] hiranonis strain DSM 13275 chromosome, complete genome	2521899	1314747	1336394	2521899	head,terminase,plate,capsid,portal,tail,holin	Clostridium_phage(70.59%)	33	NA	NA
WP_040410575.1|1314747_1315149_-|holin	phage holin family protein	holin	M9Q253	Clostridium_phage	54.9	2.6e-34
WP_006440394.1|1315150_1315720_-	glucosaminidase domain-containing protein	NA	NA	NA	NA	NA
WP_040410462.1|1315788_1315974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440392.1|1315998_1316385_-	hypothetical protein	NA	S6C455	Thermus_phage	39.3	3.7e-17
WP_006440391.1|1316401_1316890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440390.1|1316902_1317370_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440389.1|1317380_1317857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440388.1|1317868_1318333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440387.1|1318347_1318998_-	DUF2313 domain-containing protein	NA	S6BFJ0	Thermus_phage	39.0	8.3e-22
WP_148881816.1|1318998_1319964_-|plate	baseplate J/gp47 family protein	plate	A0A090D841	Clostridium_phage	46.2	2.5e-75
WP_006440385.1|1320049_1320487_-	DUF2634 domain-containing protein	NA	A0A0A8WJ32	Clostridium_phage	57.0	2.2e-42
WP_006440384.1|1320486_1320789_-	DUF2577 family protein	NA	NA	NA	NA	NA
WP_006440383.1|1320800_1322168_-	C40 family peptidase	NA	A0A0K2SUC1	Clostridium_phage	36.8	7.2e-84
WP_006440382.1|1322178_1322820_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1V0DZX0	Clostridioides_phage	40.4	3.3e-39
WP_006440381.1|1322822_1324469_-	hypothetical protein	NA	A0A1V0DZX3	Clostridioides_phage	39.5	2.3e-15
WP_170239659.1|1324482_1324626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440379.1|1324649_1325102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440378.1|1325159_1325606_-|tail	phage tail tube protein	tail	NA	NA	NA	NA
WP_006440377.1|1325610_1326714_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A1V0DZX4	Clostridioides_phage	41.1	9.3e-66
WP_006440376.1|1326713_1327160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440375.1|1327152_1327596_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_006440374.1|1327597_1327942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440373.1|1327941_1328352_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_006440372.1|1328344_1328608_-	Rho termination factor N-terminal domain-containing protein	NA	A0A090D801	Clostridium_phage	39.1	6.3e-05
WP_006440371.1|1328625_1329567_-	hypothetical protein	NA	A0A090D825	Clostridium_phage	51.5	3.9e-89
WP_006440370.1|1329595_1330132_-	phage scaffolding protein	NA	A0A0A8WFU8	Clostridium_phage	43.1	9.0e-06
WP_006440369.1|1330481_1330691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440368.1|1330704_1332078_-|capsid	minor capsid protein	capsid	A0A090D822	Clostridium_phage	44.7	1.7e-69
WP_148881817.1|1332067_1333414_-|portal	phage portal protein	portal	A0A090DBP3	Clostridium_phage	50.9	2.2e-117
WP_006440365.1|1333428_1334832_-|terminase	phage terminase large subunit	terminase	A0A090EUA8	Clostridium_phage	71.2	1.4e-188
WP_006440364.1|1334824_1335283_-	hypothetical protein	NA	A0A0A7RTH0	Clostridium_phage	65.6	9.9e-46
WP_006440363.1|1335470_1335890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040410569.1|1335971_1336394_-	DUF1064 domain-containing protein	NA	A0A0A8WFH8	Clostridium_phage	58.4	1.1e-35
>prophage 3
NZ_CP036523	[Clostridium] hiranonis strain DSM 13275 chromosome, complete genome	2521899	1343635	1351909	2521899	integrase	Clostridium_phage(50.0%)	13	1345236:1345250	1359154:1359168
WP_006440341.1|1343635_1344466_-	hypothetical protein	NA	A0A1B1P7G4	Bacillus_phage	53.7	1.4e-29
WP_040410567.1|1344479_1345094_-	ERF family protein	NA	A0A090D840	Clostridium_phage	52.2	1.7e-48
WP_006440339.1|1345151_1345673_-	siphovirus Gp157 family protein	NA	A0A0A8WFY3	Clostridium_phage	39.3	6.7e-22
1345236:1345250	attL	TTTTATCTTTTTCTT	NA	NA	NA	NA
WP_006440338.1|1345854_1346091_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440337.1|1346090_1346327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440336.1|1346301_1346658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440335.1|1346737_1346893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050754664.1|1346897_1347707_-	phage antirepressor KilAC domain-containing protein	NA	A0A1W6JNH2	Staphylococcus_phage	63.0	2.3e-77
WP_050754663.1|1347708_1347936_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_006440332.1|1348107_1348533_+	helix-turn-helix domain-containing protein	NA	A0A0S2MVI1	Bacillus_phage	28.5	2.9e-07
WP_006440331.1|1348554_1348980_+	ImmA/IrrE family metallo-endopeptidase	NA	D2XR38	Bacillus_phage	44.7	7.6e-24
WP_006440330.1|1348992_1350573_+	DUF4041 domain-containing protein	NA	X5JAC1	Clostridium_phage	66.5	3.7e-100
WP_006440329.1|1350775_1351909_+|integrase	site-specific integrase	integrase	A0A0A8WIF9	Clostridium_phage	35.9	6.0e-60
1359154:1359168	attR	TTTTATCTTTTTCTT	NA	NA	NA	NA
>prophage 4
NZ_CP036523	[Clostridium] hiranonis strain DSM 13275 chromosome, complete genome	2521899	1568296	1647259	2521899	head,terminase,plate,protease,transposase,capsid,portal,tail,integrase,holin,tRNA	Clostridium_phage(55.88%)	89	1634312:1634328	1647479:1647495
WP_148881830.1|1568296_1568887_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_118549764.1|1569108_1569336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170239654.1|1569423_1570683_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_006440130.1|1570786_1572061_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_006440129.1|1572252_1572459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440128.1|1572546_1574220_-	ribonuclease J	NA	NA	NA	NA	NA
WP_040410431.1|1574731_1575469_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_083780557.1|1575560_1576016_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_050754671.1|1576112_1576379_-	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_006440123.1|1576552_1576975_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_006440122.1|1576961_1579181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006440121.1|1579185_1579443_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_040410430.1|1579472_1582109_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	33.1	2.6e-61
WP_006440119.1|1582488_1583562_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_040410429.1|1583597_1584038_-	Fe-S cluster assembly scaffold protein NifU	NA	A0A2H4N7M4	Lake_Baikal_phage	55.9	4.1e-33
WP_040410428.1|1584137_1585334_-	cysteine desulfurase NifS	NA	H7BUW1	unidentified_phage	37.3	2.0e-37
WP_006440116.1|1585451_1585919_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_040410427.1|1586008_1587301_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.9	2.0e-88
WP_040410426.1|1587396_1588182_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_040410425.1|1588486_1590562_-	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	36.9	2.0e-101
WP_040410424.1|1590590_1591712_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_006440107.1|1591764_1593321_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA	NA
WP_006440106.1|1593333_1593681_-	YraN family protein	NA	NA	NA	NA	NA
WP_006440105.1|1593847_1594354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006440104.1|1594471_1594717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_118549764.1|1594953_1595181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170239654.1|1595268_1596528_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_006440103.1|1596626_1597643_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_006440102.1|1597737_1598508_-	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	41.9	9.2e-28
WP_006440101.1|1598654_1599926_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_040410423.1|1600332_1601616_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_040410537.1|1602268_1603564_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_006440098.1|1604235_1605129_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_040410422.1|1605241_1605595_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_040410421.1|1605713_1606400_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_006440095.1|1606409_1606928_-	16S rRNA processing protein RimM	NA	NA	NA	NA	NA
WP_040410536.1|1607019_1607247_-	KH domain-containing protein	NA	NA	NA	NA	NA
WP_040410420.1|1607270_1607522_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_006440092.1|1607561_1608923_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_040410419.1|1608919_1609288_-	YlxM family DNA-binding protein	NA	NA	NA	NA	NA
WP_006440090.1|1609509_1610862_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_006440089.1|1610885_1614440_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_040410418.1|1614481_1615549_-	radical SAM protein	NA	E3T5G2	Cafeteria_roenbergensis_virus	26.7	3.0e-08
WP_148881831.1|1615558_1616218_-	ribonuclease III	NA	M1PMQ4	Moumouvirus	31.8	1.4e-21
WP_148881763.1|1616265_1617588_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	35.7	1.7e-29
WP_006439318.1|1617664_1618555_-	YegS/Rv2252/BmrU family lipid kinase	NA	NA	NA	NA	NA
WP_006439317.1|1618571_1619213_-	lactate utilization protein	NA	NA	NA	NA	NA
WP_006439316.1|1619313_1619853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439315.1|1619888_1621358_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_006439314.1|1621923_1622721_-	N-acetylmuramoyl-L-alanine amidase	NA	E5G068	Clostridium_phage	30.3	2.2e-08
WP_006439313.1|1622722_1623136_-|holin	phage holin family protein	holin	A0A0A7S099	Clostridium_phage	52.3	2.8e-31
WP_006439312.1|1623234_1623408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439311.1|1623438_1623858_-	hypothetical protein	NA	S6C455	Thermus_phage	36.5	5.5e-11
WP_006439310.1|1623873_1624440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148881832.1|1624450_1624825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439308.1|1624983_1625346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439307.1|1625502_1625826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439305.1|1625982_1626456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439304.1|1626455_1627049_-	YmfQ family protein	NA	J9QD29	Clostridium_phage	42.4	9.2e-28
WP_006439303.1|1627041_1628097_-|plate	baseplate J/gp47 family protein	plate	A0A090EU53	Clostridium_phage	44.9	1.0e-77
WP_006439302.1|1628089_1628521_-	DUF2634 domain-containing protein	NA	J9QE34	Clostridium_phage	52.3	1.3e-31
WP_006439301.1|1628520_1628823_-	DUF2577 family protein	NA	NA	NA	NA	NA
WP_006439300.1|1628832_1630524_-	C40 family peptidase	NA	A0A0K2SUC1	Clostridium_phage	45.9	3.0e-124
WP_006439299.1|1630524_1631160_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A8WJR4	Clostridium_phage	38.8	4.9e-35
WP_006439298.1|1631175_1632924_-	hypothetical protein	NA	A0A0K2SUF9	Clostridium_phage	54.3	2.3e-95
WP_006439297.1|1632924_1633074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439296.1|1633097_1633481_-	hypothetical protein	NA	A0A0A8WIB2	Clostridium_phage	41.7	9.5e-18
WP_006439295.1|1633497_1633944_-|tail	phage tail tube protein	tail	A0A0A8WF55	Clostridium_phage	62.8	1.5e-43
WP_006439294.1|1633957_1635031_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A0A8WJR2	Clostridium_phage	47.5	1.3e-88
1634312:1634328	attL	CTTTTTAAAATCTTCTA	NA	NA	NA	NA
WP_006439293.1|1635033_1635444_-	hypothetical protein	NA	A0A0K2SUF6	Clostridium_phage	42.3	2.4e-19
WP_006439292.1|1635447_1635900_-	HK97 gp10 family phage protein	NA	A0A0A8WIW8	Clostridium_phage	54.1	4.4e-38
WP_006439291.1|1635892_1636231_-|head	phage head closure protein	head	A0A0K2SU81	Clostridium_phage	55.4	2.1e-24
WP_006439290.1|1636230_1636527_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0K2SUB5	Clostridium_phage	43.2	2.4e-16
WP_006439289.1|1636602_1637805_-|capsid	phage major capsid protein	capsid	R9TQG7	Paenibacillus_phage	27.8	3.9e-17
WP_050754633.1|1637794_1638523_-|protease	Clp protease ClpP	protease	A0A0A8WFA4	Clostridium_phage	52.1	8.9e-57
WP_006439287.1|1638515_1639688_-|portal	phage portal protein	portal	J9QE83	Clostridium_phage	64.6	5.5e-141
WP_006439286.1|1639700_1641386_-|terminase	terminase large subunit	terminase	A0A290GJW3	Caldibacillus_phage	68.6	3.7e-231
WP_006439285.1|1641386_1641746_-	hypothetical protein	NA	A0A290GJQ7	Caldibacillus_phage	62.3	2.7e-30
WP_006439284.1|1641904_1642201_-	HNH endonuclease	NA	R9TNN2	Paenibacillus_phage	53.7	9.9e-23
WP_006439283.1|1642390_1642939_-|integrase	site-specific integrase	integrase	E2ELN7	Clostridium_phage	61.0	1.1e-59
WP_006439282.1|1642925_1643081_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439281.1|1643187_1643706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439279.1|1643968_1644124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439278.1|1644123_1644513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439277.1|1644512_1644794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439276.1|1644806_1645208_-	single-stranded DNA-binding protein	NA	E2ELN0	Clostridium_phage	51.8	1.9e-32
WP_006439275.1|1645218_1645593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006439274.1|1645607_1645922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148881873.1|1645936_1647259_-	AAA family ATPase	NA	A0A191ZDG5	Pseudoalteromonas_virus	22.9	5.1e-18
1647479:1647495	attR	CTTTTTAAAATCTTCTA	NA	NA	NA	NA
>prophage 5
NZ_CP036523	[Clostridium] hiranonis strain DSM 13275 chromosome, complete genome	2521899	2381541	2391961	2521899		Synechococcus_phage(33.33%)	7	NA	NA
WP_148881850.1|2381541_2385327_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	23.3	4.8e-29
WP_040410730.1|2385358_2386609_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_006441093.1|2386628_2388164_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	43.6	2.1e-63
WP_006441092.1|2388156_2388753_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.0	2.2e-21
WP_006441091.1|2388746_2389823_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	39.2	1.0e-61
WP_006441090.1|2389994_2391350_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	29.5	2.2e-45
WP_006441089.1|2391487_2391961_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	49.0	3.3e-28
