The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP043329	Pedobacter sp. CJ43 chromosome, complete genome	3854044	2764703	2771617	3854044		Synechococcus_phage(83.33%)	7	NA	NA
WP_149075109.1|2764703_2765474_-	LamG domain-containing protein	NA	Q5GQG3	Synechococcus_phage	37.3	5.8e-22
WP_039454896.1|2765516_2766293_-	hypothetical protein	NA	A0A1D8KKY6	Synechococcus_phage	38.1	1.3e-08
WP_149075110.1|2766308_2767043_-	LamG domain-containing protein	NA	Q5GQG3	Synechococcus_phage	39.7	1.1e-25
WP_168199439.1|2767059_2767851_-	LamG domain-containing protein	NA	M4QPH6	Synechococcus_phage	29.0	4.4e-09
WP_149075112.1|2767861_2768164_-	LamG domain-containing protein	NA	NA	NA	NA	NA
WP_149075113.1|2768100_2768616_-	hypothetical protein	NA	M4QP69	Synechococcus_phage	61.7	9.5e-13
WP_168199483.1|2768842_2771617_-	hypothetical protein	NA	Q19XF5	Mycobacterium_phage	57.6	1.0e-07
>prophage 2
NZ_CP043329	Pedobacter sp. CJ43 chromosome, complete genome	3854044	3254254	3331404	3854044	tRNA,holin,protease,transposase	Acidithiobacillus_phage(36.36%)	58	NA	NA
WP_026905325.1|3254254_3254596_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_039451969.1|3254982_3255456_+	ribosome assembly cofactor RimP	NA	NA	NA	NA	NA
WP_039451966.1|3255486_3256722_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_039451961.1|3260020_3260971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149075432.1|3260977_3262816_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	31.3	5.6e-55
WP_149075434.1|3265780_3266695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149075435.1|3266748_3267645_+	methylmalonyl Co-A mutase-associated GTPase MeaB	NA	NA	NA	NA	NA
WP_149075436.1|3267628_3268918_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_149075437.1|3269077_3270523_+	OmpA family protein	NA	NA	NA	NA	NA
WP_149075438.1|3271140_3272064_+	EamA family transporter	NA	NA	NA	NA	NA
WP_149075439.1|3272056_3274162_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_149075936.1|3274246_3275449_+	MFS transporter	NA	NA	NA	NA	NA
WP_149075440.1|3275485_3277939_+	carboxypeptidase-like regulatory domain-containing protein	NA	NA	NA	NA	NA
WP_081987637.1|3277972_3278209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149075441.1|3278239_3280003_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	29.1	1.4e-42
WP_149075442.1|3280192_3282955_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_039451927.1|3283017_3283233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149075443.1|3283363_3283951_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_149075444.1|3284003_3285209_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_149075445.1|3285210_3286371_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_149075446.1|3286495_3287683_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_149075447.1|3287729_3288224_+	DUF2452 domain-containing protein	NA	NA	NA	NA	NA
WP_149075448.1|3288326_3288992_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_039451914.1|3289058_3289745_+	OmpA family protein	NA	NA	NA	NA	NA
WP_149075449.1|3289797_3290613_-	maleylpyruvate isomerase family protein	NA	NA	NA	NA	NA
WP_149075450.1|3290704_3292057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149075451.1|3292294_3293008_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_149075452.1|3293007_3294045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075453.1|3294158_3295160_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_039452018.1|3295177_3295771_-|tRNA	tRNA-(ms[2]io[6]A)-hydroxylase	tRNA	NA	NA	NA	NA
WP_149075454.1|3295800_3296373_-	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_149075455.1|3297027_3297891_-	YicC family protein	NA	NA	NA	NA	NA
WP_149075456.1|3298016_3298712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075457.1|3298923_3299388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075458.1|3299550_3299922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168199457.1|3299985_3300360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075460.1|3300364_3300871_+|protease	trypsin-like serine protease	protease	G4YAT2	Emiliania_huxleyi_virus	34.1	8.2e-09
WP_149075461.1|3300834_3301986_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_149075462.1|3302193_3303138_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
WP_052177047.1|3303247_3303976_-	ribonuclease III	NA	M1HA15	Acanthocystis_turfacea_Chlorella_virus	33.2	9.9e-24
WP_026905281.1|3305313_3305550_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	38.1	2.7e-07
WP_149075463.1|3305695_3306112_+	IPExxxVDY family protein	NA	NA	NA	NA	NA
WP_026905279.1|3306299_3307730_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_149075464.1|3308026_3308425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075465.1|3308650_3309628_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_149075466.1|3309773_3311762_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_149075467.1|3312118_3315436_+	vitamin B12-dependent ribonucleotide reductase	NA	A0A1X9SGV9	Bradyrhizobium_phage	48.6	0.0e+00
WP_168199458.1|3315510_3315993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149075469.1|3315989_3316616_-	CHAP domain-containing protein	NA	A0A291LH93	Streptomyces_phage	34.0	3.2e-10
WP_039454395.1|3316899_3318450_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	35.9	1.5e-82
WP_149075470.1|3318461_3319196_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	39.9	3.5e-45
WP_149075471.1|3319725_3320103_-	RloB domain-containing protein	NA	NA	NA	NA	NA
WP_149075473.1|3320304_3321600_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_039454396.1|3322337_3323087_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	39.7	1.4e-44
WP_039454395.1|3323098_3324649_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	35.9	1.5e-82
WP_149075474.1|3324868_3329881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075475.1|3329893_3330457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075937.1|3330849_3331404_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP043329	Pedobacter sp. CJ43 chromosome, complete genome	3854044	3386789	3444875	3854044	tRNA,integrase,protease,transposase	Myxococcus_phage(25.0%)	54	3386552:3386611	3398809:3398879
3386552:3386611	attL	ATTTAGGTTTATAATTGGTTAGTTTAAGCTCAGTTCTCCCCGTTCTGAGCTTAACTGTTT	NA	NA	NA	NA
WP_149075505.1|3386789_3387980_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_149075506.1|3388000_3388402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149074804.1|3388383_3389277_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_149075507.1|3389851_3391381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149075508.1|3391493_3393455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075509.1|3393663_3394005_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075510.1|3394091_3394925_+	AAA family ATPase	NA	Q94MN8	Myxococcus_phage	37.4	1.2e-33
WP_149075511.1|3394927_3395890_+	DUF3871 family protein	NA	NA	NA	NA	NA
WP_149075512.1|3395902_3396103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075513.1|3396506_3397271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075514.1|3397447_3397843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075515.1|3398170_3398494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075516.1|3398471_3398720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039455242.1|3398977_3399340_+|transposase	transposase	transposase	NA	NA	NA	NA
3398809:3398879	attR	ATTTAGGTTTATAATTGGTTAGTTTAAGCTCAGTTCTCCCCGTTCTGAGCTTAACTGTTTTATAGGGGTTT	NA	NA	NA	NA
WP_149075517.1|3400446_3400626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075518.1|3401009_3402386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075519.1|3402388_3402577_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_149075520.1|3402960_3403191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149075521.1|3403195_3403369_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_149075522.1|3403733_3406766_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_149075523.1|3406778_3408080_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_149075524.1|3408253_3410221_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_149075525.1|3410247_3411135_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_149075526.1|3411146_3411509_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_149075527.1|3411505_3412489_-	2-hydroxyacid dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	40.9	7.8e-64
WP_149075528.1|3413972_3415100_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_149075529.1|3415096_3415789_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_149075530.1|3415781_3416885_-	type III polyketide synthase	NA	NA	NA	NA	NA
WP_149075531.1|3416932_3417781_+	UbiA family prenyltransferase	NA	NA	NA	NA	NA
WP_149075532.1|3417785_3418238_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_149075533.1|3418241_3418889_-	HD domain-containing protein	NA	S4W232	Pandoravirus	30.7	1.2e-15
WP_026905198.1|3418888_3419215_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_149075534.1|3419252_3419999_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_149075535.1|3420011_3420761_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_149075536.1|3420834_3421293_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_149075537.1|3421417_3422338_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_149075538.1|3422626_3425080_+	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA	NA
WP_149075539.1|3425079_3426012_+	homoserine kinase	NA	NA	NA	NA	NA
WP_149075540.1|3426085_3427390_+	threonine synthase	NA	NA	NA	NA	NA
WP_168199460.1|3427772_3430226_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_149075939.1|3430284_3432777_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_149075542.1|3432909_3433194_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	NA	NA	NA	NA
WP_149075543.1|3433273_3433783_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_149074277.1|3433764_3434937_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_149075544.1|3434988_3435180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039454718.1|3435272_3436547_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_149075545.1|3436732_3437608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039454735.1|3437649_3438765_-	AhpC/TSA family protein	NA	NA	NA	NA	NA
WP_039454722.1|3438770_3439955_-	formimidoylglutamase	NA	NA	NA	NA	NA
WP_149075546.1|3440091_3441066_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1B1MRD1	Pteropox_virus	26.8	1.3e-07
WP_149075547.1|3441130_3442423_+	HAD-IB family phosphatase	NA	NA	NA	NA	NA
WP_149075548.1|3442419_3442635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149075549.1|3442673_3443354_+	DUF480 domain-containing protein	NA	NA	NA	NA	NA
WP_149075550.1|3443483_3444875_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
