The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP031065	Bacillus sp. SH8-8 chromosome, complete genome	5241886	256670	264619	5241886		uncultured_virus(33.33%)	6	NA	NA
WP_000917311.1|256670_256955_+	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	54.8	1.2e-20
WP_001029993.1|256993_258628_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	58.0	1.5e-157
WP_000743905.1|259035_260574_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.7	8.8e-22
WP_000833096.1|260958_262284_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.4	4.1e-44
WP_000929885.1|262428_263130_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.9	7.3e-40
WP_000719205.1|263113_264619_+	aminopeptidase AmpS	NA	W8CYF6	Bacillus_phage	30.3	5.4e-32
>prophage 2
NZ_CP031065	Bacillus sp. SH8-8 chromosome, complete genome	5241886	310195	318571	5241886		Synechococcus_phage(50.0%)	8	NA	NA
WP_000625682.1|310195_311503_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.3	4.9e-21
WP_001170544.1|311591_312311_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	4.0e-49
WP_000278823.1|312303_312558_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666786.1|312554_313238_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000055564.1|313221_315441_+	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	41.2	2.0e-163
WP_000879025.1|315425_316841_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	3.3e-55
WP_001262439.1|316946_317987_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	45.9	1.2e-67
WP_000088589.1|317983_318571_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	9.1e-28
>prophage 3
NZ_CP031065	Bacillus sp. SH8-8 chromosome, complete genome	5241886	649212	657209	5241886		Bacillus_phage(66.67%)	8	NA	NA
WP_116269190.1|649212_650181_-	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	29.9	1.4e-17
WP_000085783.1|650260_650782_+	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_006918010.1|650795_652187_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	29.2	1.1e-31
WP_006918011.1|652198_652876_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.6	1.1e-32
WP_149149323.1|653051_654299_+	cell wall-binding repeat-containing protein	NA	NA	NA	NA	NA
WP_000277058.1|654432_654963_+	DUF4352 domain-containing protein	NA	A0A0S2MVG4	Bacillus_phage	33.7	3.6e-15
WP_000831286.1|654975_655320_+	DUF4064 domain-containing protein	NA	A0A0S2MVJ2	Bacillus_phage	78.1	8.5e-42
WP_000487920.1|655757_657209_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	54.2	4.4e-140
>prophage 4
NZ_CP031065	Bacillus sp. SH8-8 chromosome, complete genome	5241886	1798969	1807075	5241886		Bacillus_phage(66.67%)	7	NA	NA
WP_000755496.1|1798969_1800268_+	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	31.5	3.5e-11
WP_001194309.1|1800367_1801132_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_049107614.1|1801372_1803133_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	98.2	3.1e-273
WP_000612414.1|1803218_1803896_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	99.1	1.1e-122
WP_049107615.1|1803892_1804966_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	98.3	1.6e-187
WP_000818985.1|1805193_1805913_+	3-ketoacyl-ACP reductase	NA	W8CYX9	Bacillus_phage	100.0	5.9e-61
WP_001258539.1|1806202_1807075_+	aminoglycoside 6-adenylyltransferase	NA	E4ZFP8	Streptococcus_phage	44.4	2.8e-65
>prophage 5
NZ_CP031065	Bacillus sp. SH8-8 chromosome, complete genome	5241886	2429501	2472074	5241886	portal,integrase,head,capsid,terminase,tail,bacteriocin,holin,protease	Bacillus_phage(60.53%)	54	2424790:2424805	2458995:2459010
2424790:2424805	attL	GCTTTAAAAGATGTAA	NA	NA	NA	NA
WP_001071364.1|2429501_2429822_+|bacteriocin	heterocycloanthracin/sonorensin family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002024190.1|2430311_2430797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000736205.1|2431109_2431811_+	DUF3962 domain-containing protein	NA	NA	NA	NA	NA
WP_000675852.1|2431849_2432959_-|integrase	site-specific integrase	integrase	A0A0U3U8Y8	Bacillus_phage	79.7	5.7e-148
WP_149149632.1|2433622_2434831_+	hypothetical protein	NA	D2XQ10	Bacillus_virus	44.7	4.7e-79
WP_102956497.1|2435273_2435624_-	helix-turn-helix transcriptional regulator	NA	A0A288WFW4	Bacillus_phage	39.7	3.3e-17
WP_149149633.1|2435806_2436103_+	helix-turn-helix domain-containing protein	NA	A0A288WG89	Bacillus_phage	46.5	1.8e-08
WP_102956499.1|2436065_2436278_+	hypothetical protein	NA	A0A288WFT2	Bacillus_phage	50.0	5.4e-07
WP_098520263.1|2436318_2436585_+	helix-turn-helix domain-containing protein	NA	A0A0U3ULL9	Bacillus_phage	90.6	1.2e-35
WP_149149634.1|2436959_2437676_+	DnaD domain protein	NA	A0A1B0T6C0	Bacillus_phage	80.7	2.1e-79
WP_149149635.1|2437614_2438490_+	ATP-binding protein	NA	Q2I8C8	Bacillus_phage	44.5	4.2e-61
WP_016124626.1|2438505_2438700_+	hypothetical protein	NA	A0A1B1P7U7	Bacillus_phage	89.1	4.3e-27
WP_000805174.1|2438725_2438899_+	DUF3954 domain-containing protein	NA	A0A1B1P7U5	Bacillus_phage	100.0	1.2e-25
WP_149149636.1|2438913_2439168_+	hypothetical protein	NA	A0A0U3SU43	Bacillus_phage	82.1	1.7e-34
WP_149149637.1|2439176_2439641_+	nucleoside permease	NA	A0A2H4J8I5	uncultured_Caudovirales_phage	35.4	4.4e-17
WP_149150116.1|2439836_2440121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_098398431.1|2440011_2440677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149149638.1|2440805_2441336_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_149149639.1|2441579_2442206_-	exosporium leader peptide-containing protein	NA	NA	NA	NA	NA
WP_086385656.1|2442326_2442599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149149640.1|2442745_2443198_-	epimerase	NA	NA	NA	NA	NA
WP_149150117.1|2443363_2444068_+	site-specific DNA-methyltransferase	NA	M4M8X6	Vibrio_phage	61.3	3.1e-75
WP_149149641.1|2444584_2444881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149149642.1|2445309_2445792_+	ArpU family transcriptional regulator	NA	H0USV3	Bacillus_phage	81.9	4.6e-70
WP_149149643.1|2445791_2446334_+|integrase	tyrosine-type recombinase/integrase	integrase	W8CYP1	Bacillus_phage	88.9	1.0e-86
WP_149149644.1|2446539_2447379_+	DUF2935 domain-containing protein	NA	A0A167RKB4	Powai_lake_megavirus	25.7	1.5e-07
WP_149149645.1|2447749_2448172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065845245.1|2448625_2449177_+	hypothetical protein	NA	A0A288WFY4	Bacillus_phage	41.5	2.0e-32
WP_080478490.1|2449257_2449563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065845247.1|2449834_2450314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149248986.1|2450361_2450562_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065845249.1|2450562_2450820_+	hydrolase	NA	NA	NA	NA	NA
WP_065845250.1|2450812_2451148_+	HNH endonuclease	NA	D2XR61	Bacillus_phage	88.3	3.4e-51
WP_000763336.1|2451302_2451659_+	hypothetical protein	NA	A0A2H4JBV9	uncultured_Caudovirales_phage	100.0	3.6e-59
WP_149149646.1|2451655_2453311_+|terminase	terminase large subunit	terminase	A0A2H4JI41	uncultured_Caudovirales_phage	95.1	8.7e-310
WP_149150118.1|2453337_2454483_+|portal	phage portal protein	portal	A0A2H4JAJ1	uncultured_Caudovirales_phage	85.2	7.9e-185
WP_149149647.1|2454466_2455243_+|protease	Clp protease ClpP	protease	A0A0A7RWX3	Clostridium_phage	55.8	1.1e-55
WP_149149648.1|2455263_2456418_+|capsid	phage major capsid protein	capsid	A0A2H4JH29	uncultured_Caudovirales_phage	85.1	1.6e-185
WP_149149649.1|2456423_2456717_+	hypothetical protein	NA	D2XR19	Bacillus_phage	91.8	5.9e-44
WP_149149650.1|2456718_2457072_+|head	phage head closure protein	head	A0A2H4JGG7	uncultured_Caudovirales_phage	95.7	5.1e-58
WP_149149651.1|2457073_2457418_+	HK97 gp10 family phage protein	NA	D2XR21	Bacillus_phage	92.0	3.4e-51
WP_149149652.1|2457414_2457744_+	hypothetical protein	NA	D2XR22	Bacillus_phage	94.5	1.3e-52
WP_001004911.1|2457744_2458332_+|tail	phage tail protein	tail	A0A2H4JDV4	uncultured_Caudovirales_phage	82.6	3.0e-87
WP_149149653.1|2458338_2458701_+	hypothetical protein	NA	A0A2H4JAG8	uncultured_Caudovirales_phage	80.8	4.7e-51
WP_140335780.1|2458697_2458916_+	hypothetical protein	NA	A0A2H4JHE4	uncultured_Caudovirales_phage	92.5	2.8e-22
WP_149149654.1|2458931_2460143_+	hypothetical protein	NA	A0A2H4JAI2	uncultured_Caudovirales_phage	86.6	7.3e-189
2458995:2459010	attR	GCTTTAAAAGATGTAA	NA	NA	NA	NA
WP_149149655.1|2460396_2460657_+	hypothetical protein	NA	A0A1B1P763	Bacillus_phage	85.9	1.3e-34
WP_149149656.1|2460871_2463040_+|tail	phage tail tape measure protein	tail	A0A2H4JC82	uncultured_Caudovirales_phage	83.5	2.3e-84
WP_149149657.1|2463081_2464539_+|tail	phage tail family protein	tail	A0A0A7AQV1	Bacillus_phage	59.5	1.3e-171
WP_149149658.1|2464535_2468855_+	hypothetical protein	NA	A0A0S2MVB4	Bacillus_phage	59.1	0.0e+00
WP_149149659.1|2468866_2469247_+	hypothetical protein	NA	A0A0S2MVE0	Bacillus_phage	74.2	5.3e-45
WP_149149660.1|2469365_2470751_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA	NA
WP_065703361.1|2470839_2471265_+|holin	phage holin family protein	holin	A0A1B1P787	Bacillus_phage	96.5	1.4e-70
WP_149149661.1|2471264_2472074_+	N-acetylmuramoyl-L-alanine amidase	NA	D2XR33	Bacillus_phage	92.2	4.8e-152
>prophage 6
NZ_CP031065	Bacillus sp. SH8-8 chromosome, complete genome	5241886	3514195	3524368	5241886	bacteriocin	Bacillus_phage(54.55%)	14	NA	NA
WP_000413738.1|3514195_3514816_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.2	8.2e-19
WP_048536031.1|3514906_3515710_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_000031383.1|3515710_3516253_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_001102628.1|3516245_3516569_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000392444.1|3516940_3517171_-|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A1B1P7Q9	Bacillus_phage	73.7	1.5e-23
WP_016123244.1|3517232_3518129_-	hypothetical protein	NA	A0A0S2MVR5	Bacillus_phage	52.1	4.6e-79
WP_006920050.1|3518401_3519244_-	M23 family metallopeptidase	NA	A0A218KCJ1	Bacillus_phage	47.7	6.1e-33
WP_033692154.1|3519362_3520349_-	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	43.9	1.7e-34
WP_000464425.1|3520587_3520974_-	DUF1492 domain-containing protein	NA	A0A288WG73	Bacillus_phage	71.4	2.6e-47
WP_149149878.1|3521092_3521974_-	DnaD domain protein	NA	A0A2H4J394	uncultured_Caudovirales_phage	65.9	5.3e-96
WP_001189065.1|3522126_3522321_-	hypothetical protein	NA	A0A1C8E9A1	Bacillus_phage	71.0	1.7e-15
WP_086412708.1|3522332_3523091_-	phage regulatory protein	NA	A0A2H4JBC7	uncultured_Caudovirales_phage	69.0	2.0e-96
WP_000283431.1|3523293_3523506_-	hypothetical protein	NA	A6M975	Geobacillus_virus	63.0	1.6e-11
WP_006920059.1|3523696_3524368_+	helix-turn-helix domain-containing protein	NA	A0A2H4J441	uncultured_Caudovirales_phage	41.0	6.8e-35
>prophage 7
NZ_CP031065	Bacillus sp. SH8-8 chromosome, complete genome	5241886	4311663	4319350	5241886		Staphylococcus_phage(16.67%)	9	NA	NA
WP_017674010.1|4311663_4312587_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	44.0	4.0e-46
WP_016125943.1|4312713_4313649_-	HAMP domain-containing histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	25.9	4.3e-11
WP_149149936.1|4313650_4314343_-	response regulator	NA	B5LWA6	Feldmannia_species_virus	29.8	1.4e-06
WP_149149937.1|4314685_4314880_+	YwbE family protein	NA	NA	NA	NA	NA
WP_006916399.1|4314918_4316118_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	41.2	4.7e-71
WP_000587818.1|4316413_4316737_+	heme oxygenase	NA	NA	NA	NA	NA
WP_001086120.1|4316809_4317574_-	class B sortase	NA	NA	NA	NA	NA
WP_000403758.1|4317606_4318377_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.1	3.7e-13
WP_001036848.1|4318366_4319350_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.2	1.1e-17
