assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	1	228189-228482	1,1,1	PILER-CR,CRT,CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	GTCGTTCCCCTTGTGGGAACGTGGATTGAAAC,GTCGTTCCCCTTGTGGGAACGTGGATTGAAAC,TCGTTCCCCTTGTGGGAACGTGGATTGAAAC	32,32,31	0	0	NA	NA	NA:NA:NA	3,4,4	4	Orphan	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA	NA|237aa|up_9|NZ_CP036524.1_211018_211729_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|422aa|up_8|NZ_CP036524.1_211815_213081_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|355aa|up_7|NZ_CP036524.1_213383_214448_+	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated	NA|400aa|up_6|NZ_CP036524.1_214475_215675_+	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|852aa|up_5|NZ_CP036524.1_215740_218296_-	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription]	NA|667aa|up_4|NZ_CP036524.1_218632_220633_+	COG2015, COG2015, Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|466aa|up_3|NZ_CP036524.1_220791_222189_+	PRK02256, PRK02256, putative aminopeptidase 1; Provisional	NA|467aa|up_2|NZ_CP036524.1_222265_223666_-	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|390aa|up_1|NZ_CP036524.1_223703_224873_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|877aa|up_0|NZ_CP036524.1_225155_227786_+	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|243aa|down_0|NZ_CP036524.1_228831_229560_+	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily	NA|345aa|down_1|NZ_CP036524.1_229543_230578_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|223aa|down_2|NZ_CP036524.1_230599_231268_+	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|294aa|down_3|NZ_CP036524.1_231281_232163_+	PRK00723, PRK00723, phosphatidylserine decarboxylase; Provisional	NA|66aa|down_4|NZ_CP036524.1_232651_232849_+	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS	NA|211aa|down_5|NZ_CP036524.1_232852_233485_+	PRK08644, PRK08644, sulfur carrier protein ThiS adenylyltransferase ThiF	NA|260aa|down_6|NZ_CP036524.1_233497_234277_+	PRK00208, thiG, thiazole synthase; Reviewed	NA|406aa|down_7|NZ_CP036524.1_234293_235511_+	PRK09240, thiH, 2-iminoacetate synthase ThiH	NA|195aa|down_8|NZ_CP036524.1_235525_236110_+	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|309aa|down_9|NZ_CP036524.1_236189_237116_+	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	2	2483802-2484636	2,2,2	CRT,PILER-CR,CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	ATTTCAATCCACTCCTTCCATGCGGAAGGAGAC,ATTTCAATCCACTCCTTCCATGCGGAAGGAGAC,ATTTCAATCCACTCCTTCCATGCGGAAGGAGAC	33,33,33	0	0	NA	NA	NA:NA:NA	12,11,11	12	Orphan	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA|72aa|up_6|NZ_CP036524.1_2477616_2477832_+,NA|159aa|up_5|NZ_CP036524.1_2477868_2478345_+,NA	NA|204aa|up_9|NZ_CP036524.1_2475675_2476287_+	pfam08876, DUF1836, Domain of unknown function (DUF1836)	NA|98aa|up_8|NZ_CP036524.1_2476308_2476602_-	TIGR02531, conserved_hypothetical_protein, TrpR-related protein YerC/YecD	NA|242aa|up_7|NZ_CP036524.1_2476666_2477392_-	cd07437, PHP_HisPPase_Ycdx_like, Polymerase and Histidinol Phosphatase domain of Ycdx like	NA|72aa|up_6|NZ_CP036524.1_2477616_2477832_+	NA	NA|159aa|up_5|NZ_CP036524.1_2477868_2478345_+	NA	NA|332aa|up_4|NZ_CP036524.1_2478418_2479414_+	cd08963, L-asparaginase_I, Type I (cytosolic) bacterial L-asparaginase	NA|232aa|up_3|NZ_CP036524.1_2479561_2480257_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|336aa|up_2|NZ_CP036524.1_2480381_2481389_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|336aa|up_1|NZ_CP036524.1_2481514_2482522_+	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|349aa|up_0|NZ_CP036524.1_2482575_2483622_+	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|899aa|down_0|NZ_CP036524.1_2484868_2487565_-	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis]	NA|1075aa|down_1|NZ_CP036524.1_2487715_2490940_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|621aa|down_2|NZ_CP036524.1_2490987_2492850_-	cd11324, AmyAc_Amylosucrase, Alpha amylase catalytic domain found in Amylosucrase	NA|727aa|down_3|NZ_CP036524.1_2492867_2495048_-	pfam02065, Melibiase, Melibiase	NA|284aa|down_4|NZ_CP036524.1_2495253_2496105_+	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|276aa|down_5|NZ_CP036524.1_2496132_2496960_-	cd04782, HTH_BltR, Helix-Turn-Helix DNA binding domain of the BltR transcription regulator	NA|443aa|down_6|NZ_CP036524.1_2497074_2498403_+	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA	NA|382aa|down_7|NZ_CP036524.1_2498448_2499594_-	TIGR02872, UPF0118_membrane_protein_YtvI, sporulation integral membrane protein YtvI	NA|201aa|down_8|NZ_CP036524.1_2499597_2500200_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|778aa|down_9|NZ_CP036524.1_2500228_2502562_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	3	2658611-2659717	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Type I-C, Type I-U?,Type I-U	GCTTCAATCCACTCTACCCAAATGGGTAGAGAC,GCTTCAATCCACTCTACCCAAATGGGTAGAGAC,GCTTCAATCCACTCTACCCAAATGGGTAGAGAC	33,33,33	0	0	NA	NA	NA:NA:NA	16,16,15	16	TypeI-C,TypeI-U,TypeI-U?	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA|115aa|up_3|NZ_CP036524.1_2656613_2656958_-,NA|115aa|up_1|NZ_CP036524.1_2657554_2657899_-,NA	NA|490aa|up_9|NZ_CP036524.1_2651108_2652578_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|244aa|up_8|NZ_CP036524.1_2652823_2653555_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|195aa|up_7|NZ_CP036524.1_2653571_2654156_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|256aa|up_6|NZ_CP036524.1_2654329_2655097_+	cd05233, SDR_c, classical (c) SDRs	NA|258aa|up_5|NZ_CP036524.1_2655147_2655921_+	cd05233, SDR_c, classical (c) SDRs	NA|110aa|up_4|NZ_CP036524.1_2656190_2656520_-	pfam13630, SdpI, SdpI/YfhL protein family	NA|115aa|up_3|NZ_CP036524.1_2656613_2656958_-	NA	NA|176aa|up_2|NZ_CP036524.1_2656987_2657515_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|115aa|up_1|NZ_CP036524.1_2657554_2657899_-	NA	NA|49aa|up_0|NZ_CP036524.1_2658360_2658507_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	cas2|97aa|down_0|NZ_CP036524.1_2659972_2660263_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|344aa|down_1|NZ_CP036524.1_2660271_2661303_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|222aa|down_2|NZ_CP036524.1_2661304_2661970_-	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas7|287aa|down_3|NZ_CP036524.1_2661956_2662817_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|655aa|down_4|NZ_CP036524.1_2662818_2664783_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|250aa|down_5|NZ_CP036524.1_2664766_2665516_-	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|806aa|down_6|NZ_CP036524.1_2665530_2667948_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|224aa|down_7|NZ_CP036524.1_2668161_2668833_-	COG5578, COG5578, Predicted integral membrane protein [Function unknown]	NA|327aa|down_8|NZ_CP036524.1_2668841_2669822_-	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane]	NA|279aa|down_9|NZ_CP036524.1_2669833_2670670_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	4	3047228-3047415	4	PILER-CR	no		WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	TTAAACGCAGAGTACCCAATGGATTGCAGACTCTCTGGAAAGGACACGC	49	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA|153aa|up_5|NZ_CP036524.1_3039439_3039898_-,NA|116aa|down_0|NZ_CP036524.1_3047912_3048260_-,NA|88aa|down_4|NZ_CP036524.1_3053805_3054069_+	NA|309aa|up_9|NZ_CP036524.1_3036356_3037283_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|198aa|up_8|NZ_CP036524.1_3037517_3038111_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|255aa|up_7|NZ_CP036524.1_3038110_3038875_+	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family	NA|170aa|up_6|NZ_CP036524.1_3038927_3039437_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|153aa|up_5|NZ_CP036524.1_3039439_3039898_-	NA	NA|295aa|up_4|NZ_CP036524.1_3040001_3040886_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|175aa|up_3|NZ_CP036524.1_3041832_3042357_-	pfam02572, CobA_CobO_BtuR, ATP:corrinoid adenosyltransferase BtuR/CobO/CobP	NA|355aa|up_2|NZ_CP036524.1_3042555_3043620_-	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC	NA|365aa|up_1|NZ_CP036524.1_3043896_3044991_+	COG1509, KamA, Lysine 2,3-aminomutase [Amino acid transport and metabolism]	NA|173aa|up_0|NZ_CP036524.1_3045032_3045551_-	COG1827, COG1827, Predicted small molecule binding protein (contains 3H domain) [General function prediction only]	NA|116aa|down_0|NZ_CP036524.1_3047912_3048260_-	NA	NA|537aa|down_1|NZ_CP036524.1_3048556_3050167_-	pfam13290, CHB_HEX_C_1, Chitobiase/beta-hexosaminidase C-terminal domain	NA|880aa|down_2|NZ_CP036524.1_3050051_3052691_-	sd00036, LRR_3, leucine-rich repeats	NA|230aa|down_3|NZ_CP036524.1_3052805_3053495_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|88aa|down_4|NZ_CP036524.1_3053805_3054069_+	NA	NA|473aa|down_5|NZ_CP036524.1_3054135_3055554_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|504aa|down_6|NZ_CP036524.1_3055516_3057028_-	COG1361, COG1361, S-layer domain [Cell envelope biogenesis, outer membrane]	NA|241aa|down_7|NZ_CP036524.1_3057024_3057747_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|107aa|down_8|NZ_CP036524.1_3057925_3058246_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|197aa|down_9|NZ_CP036524.1_3058238_3058829_+	COG4709, COG4709, Predicted membrane protein [Function unknown]
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	5	3089319-3089393	4	CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	CTTCTGCCTTAACGCTCCTTCTGCC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA|215aa|up_4|NZ_CP036524.1_3072184_3072829_-,NA|294aa|up_2|NZ_CP036524.1_3073523_3074405_-,NA|77aa|up_1|NZ_CP036524.1_3086264_3086495_-,NA|95aa|down_2|NZ_CP036524.1_3100872_3101157_-,NA|62aa|down_3|NZ_CP036524.1_3102061_3102247_-,NA|86aa|down_6|NZ_CP036524.1_3103627_3103885_-,NA|106aa|down_9|NZ_CP036524.1_3110133_3110451_-	NA|119aa|up_9|NZ_CP036524.1_3061544_3061901_-	pfam03862, SpoVAC_SpoVAEB, SpoVAC/SpoVAEB sporulation membrane protein	NA|335aa|up_8|NZ_CP036524.1_3062025_3063030_-	pfam07451, SpoVAD, Stage V sporulation protein AD (SpoVAD)	NA|908aa|up_7|NZ_CP036524.1_3063085_3065809_-	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp	NA|225aa|up_6|NZ_CP036524.1_3066867_3067542_-	pfam12164, SporV_AA, Stage V sporulation protein AA	NA|139aa|up_5|NZ_CP036524.1_3068492_3068909_-	PRK03660, PRK03660, anti-sigma F factor; Provisional	NA|215aa|up_4|NZ_CP036524.1_3072184_3072829_-	NA	NA|225aa|up_3|NZ_CP036524.1_3072819_3073494_-	cd16015, LTA_synthase, Lipoteichoic acid synthase like	NA|294aa|up_2|NZ_CP036524.1_3073523_3074405_-	NA	NA|77aa|up_1|NZ_CP036524.1_3086264_3086495_-	NA	NA|228aa|up_0|NZ_CP036524.1_3086793_3087477_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|158aa|down_0|NZ_CP036524.1_3089430_3089904_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|75aa|down_1|NZ_CP036524.1_3098898_3099123_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|95aa|down_2|NZ_CP036524.1_3100872_3101157_-	NA	NA|62aa|down_3|NZ_CP036524.1_3102061_3102247_-	NA	NA|139aa|down_4|NZ_CP036524.1_3102459_3102876_-	PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	NA|199aa|down_5|NZ_CP036524.1_3102939_3103536_-	pfam14897, EpsG, EpsG family	NA|86aa|down_6|NZ_CP036524.1_3103627_3103885_-	NA	NA|100aa|down_7|NZ_CP036524.1_3104517_3104817_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|103aa|down_8|NZ_CP036524.1_3104937_3105246_-	cd03823, GT4_ExpE7-like, glycosyltransferase ExpE7 and similar proteins	NA|106aa|down_9|NZ_CP036524.1_3110133_3110451_-	NA
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	6	3169620-3169885	5	CRISPRCasFinder	no	WYL	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Unclear	GGCCCCTGCGGGCCCGCTGCTCC	23	0	0	NA	NA	NA	5	5	Orphan	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA|66aa|up_9|NZ_CP036524.1_3162756_3162954_-,NA|147aa|up_8|NZ_CP036524.1_3163060_3163501_-,NA|69aa|up_4|NZ_CP036524.1_3164864_3165071_-,NA|81aa|down_9|NZ_CP036524.1_3180444_3180687_-	NA|66aa|up_9|NZ_CP036524.1_3162756_3162954_-	NA	NA|147aa|up_8|NZ_CP036524.1_3163060_3163501_-	NA	NA|188aa|up_7|NZ_CP036524.1_3163520_3164084_-	cd13561, PBP2_SsuA_like_4, Putative substrate binding domain of sulfonate binding protein-like, the type 2 periplasmic binding protein fold	NA|122aa|up_6|NZ_CP036524.1_3164282_3164648_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|54aa|up_5|NZ_CP036524.1_3164706_3164868_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|69aa|up_4|NZ_CP036524.1_3164864_3165071_-	NA	NA|268aa|up_3|NZ_CP036524.1_3165070_3165874_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|292aa|up_2|NZ_CP036524.1_3165876_3166752_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|308aa|up_1|NZ_CP036524.1_3166723_3167647_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|356aa|up_0|NZ_CP036524.1_3167640_3168708_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|458aa|down_0|NZ_CP036524.1_3170526_3171900_-	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|330aa|down_1|NZ_CP036524.1_3171915_3172905_-	PRK13337, PRK13337, putative lipid kinase; Reviewed	NA|86aa|down_2|NZ_CP036524.1_3172998_3173256_-	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|294aa|down_3|NZ_CP036524.1_3173267_3174149_-	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown]	NA|294aa|down_4|NZ_CP036524.1_3174184_3175066_-	PRK05416, PRK05416, RNase adapter RapZ	NA|304aa|down_5|NZ_CP036524.1_3175067_3175979_-	PRK13905, murB, UDP-N-acetylmuramate dehydrogenase	NA|426aa|down_6|NZ_CP036524.1_3176136_3177414_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|237aa|down_7|NZ_CP036524.1_3177465_3178176_-	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription]	NA|668aa|down_8|NZ_CP036524.1_3178358_3180362_+	pfam17128, DUF5107, Domain of unknown function (DUF5107)	NA|81aa|down_9|NZ_CP036524.1_3180444_3180687_-	NA
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	7	3458775-3458869	6	CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	GTAAGGCTGGTGCACCCAGTAAACGC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA	NA|523aa|up_9|NZ_CP036524.1_3443649_3445218_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|455aa|up_8|NZ_CP036524.1_3445662_3447027_-	cd03770, SR_TndX_transposase, Serine Recombinase (SR) family, TndX-like transposase subfamily, catalytic domain; composed of large serine recombinases similar to Clostridium TndX and TnpX transposases	NA|44aa|up_7|NZ_CP036524.1_3447051_3447183_-	pfam14202, TnpW, Transposon-encoded protein TnpW	NA|228aa|up_6|NZ_CP036524.1_3447234_3447918_-	pfam14194, Cys_rich_VLP, Cysteine-rich VLP	NA|138aa|up_5|NZ_CP036524.1_3448288_3448702_+	pfam12675, DUF3795, Protein of unknown function (DUF3795)	NA|166aa|up_4|NZ_CP036524.1_3449631_3450129_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|165aa|up_3|NZ_CP036524.1_3450239_3450734_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|231aa|up_2|NZ_CP036524.1_3451552_3452245_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|1027aa|up_1|NZ_CP036524.1_3452363_3455444_-	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|266aa|up_0|NZ_CP036524.1_3455434_3456232_-	cd13691, PBP2_Peb1a_like, Substrate binding domain of an ABC aspartate/glutamate transporter; the type 2 periplasmic-binding protein fold	NA|241aa|down_0|NZ_CP036524.1_3460067_3460790_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|494aa|down_1|NZ_CP036524.1_3461164_3462646_-	cd10427, FGGY_GK_1, Uncharacterized subgroup; belongs to the glycerol kinases subfamily of the FGGY family of carbohydrate kinases	NA|295aa|down_2|NZ_CP036524.1_3462659_3463544_-	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|134aa|down_3|NZ_CP036524.1_3463621_3464023_-	PRK11797, PRK11797, D-ribose pyranase; Provisional	NA|351aa|down_4|NZ_CP036524.1_3464102_3465155_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|519aa|down_5|NZ_CP036524.1_3465158_3466715_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|218aa|down_6|NZ_CP036524.1_3466746_3467400_-	pfam10054, DUF2291, Predicted periplasmic lipoprotein (DUF2291)	NA|343aa|down_7|NZ_CP036524.1_3467588_3468617_-	cd19967, PBP1_TmRBP-like, D-ribose ABC transporter substrate-binding protein such as Thermoanaerobacter tengcongensis ribose binding protein (ttRBP)	NA|310aa|down_8|NZ_CP036524.1_3468786_3469716_-	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|278aa|down_9|NZ_CP036524.1_3469708_3470542_-	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	8	3479331-3479426	7	CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	AGGCTGGTGCAGTTAGAAAACGCTTGG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA	NA|343aa|up_9|NZ_CP036524.1_3467588_3468617_-	cd19967, PBP1_TmRBP-like, D-ribose ABC transporter substrate-binding protein such as Thermoanaerobacter tengcongensis ribose binding protein (ttRBP)	NA|310aa|up_8|NZ_CP036524.1_3468786_3469716_-	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|278aa|up_7|NZ_CP036524.1_3469708_3470542_-	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	NA|467aa|up_6|NZ_CP036524.1_3470544_3471945_-	cd00578, L-fuc_L-ara-isomerases, L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins	NA|336aa|up_5|NZ_CP036524.1_3471980_3472988_-	cd06277, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors	NA|333aa|up_4|NZ_CP036524.1_3473439_3474438_-	cd06277, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors	NA|125aa|up_3|NZ_CP036524.1_3474580_3474955_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|192aa|up_2|NZ_CP036524.1_3474987_3475563_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|243aa|up_1|NZ_CP036524.1_3475925_3476654_+	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|446aa|up_0|NZ_CP036524.1_3476650_3477988_+	cd16935, HATPase_AgrC-ComD-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Staphylococcus aureus AgrC and Streptococcus pneumoniae ComD which are involved in quorum sensing	NA|231aa|down_0|NZ_CP036524.1_3482027_3482720_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|142aa|down_1|NZ_CP036524.1_3482802_3483228_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|172aa|down_2|NZ_CP036524.1_3483284_3483800_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|65aa|down_3|NZ_CP036524.1_3483833_3484028_-	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|50aa|down_4|NZ_CP036524.1_3484049_3484199_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|247aa|down_5|NZ_CP036524.1_3484392_3485133_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|250aa|down_6|NZ_CP036524.1_3485129_3485879_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|495aa|down_7|NZ_CP036524.1_3485947_3487432_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|539aa|down_8|NZ_CP036524.1_3487446_3489063_-	pfam07905, PucR, Purine catabolism regulatory protein-like family	NA|441aa|down_9|NZ_CP036524.1_3489067_3490390_-	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology)
GCF_008281175.1_ASM828117v1	NZ_CP036524	[Clostridium] hylemonae DSM 15053 chromosome, complete genome	9	3560931-3561066	8	CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	GCGGGCTGGCGCCCTGCAGCTTCACTTGCTTGACGGGGCGCTGGCA	46	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	NA|119aa|up_1|NZ_CP036524.1_3559542_3559899_-,NA	NA|217aa|up_9|NZ_CP036524.1_3550082_3550733_-	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|460aa|up_8|NZ_CP036524.1_3550782_3552162_-	TIGR00933, Trk_system_potassium_uptake_protein_trkH	NA|230aa|up_7|NZ_CP036524.1_3552389_3553079_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|499aa|up_6|NZ_CP036524.1_3553071_3554568_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|396aa|up_5|NZ_CP036524.1_3554646_3555834_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|406aa|up_4|NZ_CP036524.1_3556139_3557357_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|431aa|up_3|NZ_CP036524.1_3557466_3558759_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|167aa|up_2|NZ_CP036524.1_3558918_3559419_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|119aa|up_1|NZ_CP036524.1_3559542_3559899_-	NA	NA|220aa|up_0|NZ_CP036524.1_3560216_3560876_-	PRK00373, PRK00373, V-type ATP synthase subunit D; Reviewed	NA|458aa|down_0|NZ_CP036524.1_3561194_3562568_-	PRK04196, PRK04196, V-type ATP synthase subunit B; Provisional	NA|589aa|down_1|NZ_CP036524.1_3562571_3564338_-	PRK04192, PRK04192, V-type ATP synthase subunit A; Provisional	NA|107aa|down_2|NZ_CP036524.1_3564365_3564686_-	PRK01395, PRK01395, V-type ATP synthase subunit F; Provisional	NA|323aa|down_3|NZ_CP036524.1_3564678_3565647_-	pfam01992, vATP-synt_AC39, ATP synthase (C/AC39) subunit	NA|198aa|down_4|NZ_CP036524.1_3565680_3566274_-	COG1390, NtpE, Archaeal/vacuolar-type H+-ATPase subunit E [Energy production and conversion]	NA|162aa|down_5|NZ_CP036524.1_3566315_3566801_-	PRK06558, PRK06558, V-type ATP synthase subunit K; Validated	NA|673aa|down_6|NZ_CP036524.1_3566800_3568819_-	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	NA|103aa|down_7|NZ_CP036524.1_3568857_3569166_-	cd06503, ATP-synt_Fo_b, F-type ATP synthase, membrane subunit b	NA|164aa|down_8|NZ_CP036524.1_3569327_3569819_-	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|295aa|down_9|NZ_CP036524.1_3570005_3570890_-	cd06061, PurM-like1, AIR synthase (PurM) related protein, subgroup 1 of unknown function
