The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP043562	Klebsiella pneumoniae strain P094-1 chromosome, complete genome	5058062	1844914	1896133	5058062	integrase,head,holin,terminase,tail,transposase	Cronobacter_phage(24.49%)	68	1846177:1846195	1862552:1862570
WP_004180410.1|1844914_1846558_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	50.4	5.7e-136
1846177:1846195	attL	CGCCAGCGTCCTGGCGGCG	NA	NA	NA	NA
WP_002910717.1|1846607_1847084_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_032441315.1|1847182_1848109_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004152313.1|1848412_1849708_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	36.8	1.3e-61
WP_004175495.1|1849722_1850529_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_021312745.1|1850769_1852032_-|integrase	site-specific integrase	integrase	A0A286S1S8	Klebsiella_phage	95.0	1.7e-233
WP_023283988.1|1852074_1852320_-	excisionase family protein	NA	A0A286S2A4	Klebsiella_phage	92.1	1.4e-35
WP_149362284.1|1852479_1852698_-	TraR/DksA family transcriptional regulator	NA	A0A0K2FI84	Escherichia_phage	49.1	1.9e-07
WP_149362285.1|1852694_1853417_-	hypothetical protein	NA	R9VWB9	Serratia_phage	64.4	1.8e-86
WP_064181876.1|1853413_1853686_-	hypothetical protein	NA	A0A192Y6Q6	Salmonella_phage	69.3	1.1e-23
WP_009483861.1|1853682_1853901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149362286.1|1853897_1855727_-	phage N-6-adenine-methyltransferase	NA	A0A1B0V7P0	Salmonella_phage	48.7	9.6e-116
WP_087802249.1|1855723_1856029_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_009483857.1|1856025_1856316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_117137305.1|1856299_1856953_-	single-stranded DNA-binding protein	NA	A0A1W6JP21	Morganella_phage	62.3	6.7e-64
WP_149362287.1|1857104_1857302_-	thioredoxin reductase	NA	NA	NA	NA	NA
WP_071646962.1|1857379_1857586_-	cell division inhibitor protein	NA	A0A0M4S6W3	Salmonella_phage	94.1	3.1e-31
WP_001548448.1|1858013_1858217_+	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	74.6	5.4e-20
WP_101816800.1|1858256_1859048_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004178801.1|1859254_1859374_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149362288.1|1859396_1860086_-	helix-turn-helix domain-containing protein	NA	Q76H56	Enterobacteria_phage	70.6	1.0e-86
WP_004178811.1|1860190_1860424_+	helix-turn-helix domain-containing protein	NA	A0A2H4FNF3	Salmonella_phage	70.4	3.0e-22
WP_001548453.1|1860464_1860686_+	hypothetical protein	NA	G8EYH8	Enterobacteria_phage	41.7	6.9e-05
WP_050849603.1|1860819_1861548_+	helix-turn-helix domain-containing protein	NA	H9C164	Pectobacterium_phage	73.0	1.6e-37
WP_004178817.1|1861544_1862321_+	hypothetical protein	NA	A0A193GYX1	Enterobacter_phage	65.0	1.1e-94
WP_004218528.1|1862320_1862623_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
1862552:1862570	attR	CGCCAGCGTCCTGGCGGCG	NA	NA	NA	NA
WP_149362289.1|1863454_1864087_+	hypothetical protein	NA	A0A0N7KZV3	Escherichia_phage	36.4	7.1e-18
WP_024622719.1|1864259_1864547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085858706.1|1864546_1864804_+	DNA polymerase III subunit theta	NA	G8C7V1	Escherichia_phage	75.3	1.1e-25
WP_149362290.1|1864813_1865302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101988850.1|1865391_1865988_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	53.8	4.7e-56
WP_074376109.1|1865993_1866164_+	NinE family protein	NA	K7P7K0	Enterobacteria_phage	63.6	2.7e-09
WP_004141687.1|1866156_1866447_+	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	88.5	5.3e-45
WP_029363688.1|1866443_1866806_+	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	82.4	4.3e-52
WP_001548467.1|1866802_1866943_+	YlcG family protein	NA	NA	NA	NA	NA
WP_149362291.1|1866939_1867629_+	antiterminator	NA	I6PDF8	Cronobacter_phage	53.2	2.6e-58
WP_025987688.1|1868716_1869022_+|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	97.9	8.6e-46
WP_149362292.1|1869008_1869458_+	glycoside hydrolase family protein	NA	A0A0M4R365	Salmonella_phage	71.1	1.7e-58
WP_065242184.1|1870509_1871136_+	hypothetical protein	NA	I6S676	Salmonella_phage	84.9	1.1e-103
WP_048294303.1|1871166_1871634_+	DUF2280 domain-containing protein	NA	I6S1P9	Salmonella_phage	73.8	1.5e-57
WP_064181888.1|1871617_1872916_+|terminase	PBSX family phage terminase large subunit	terminase	Q5G8Y7	Enterobacteria_phage	94.3	1.8e-241
WP_075647501.1|1872928_1874398_+	DUF1073 domain-containing protein	NA	F1C5D7	Cronobacter_phage	56.1	5.8e-148
WP_149362293.1|1874324_1875332_+|head	phage head morphogenesis protein	head	F1C5D8	Cronobacter_phage	68.1	3.8e-114
WP_029503697.1|1875426_1875630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149362294.1|1875727_1877107_+	DUF2213 domain-containing protein	NA	F1C5D9	Cronobacter_phage	52.7	2.3e-130
WP_149362295.1|1877106_1877541_+	hypothetical protein	NA	A0A0M3LPQ2	Mannheimia_phage	47.8	3.7e-26
WP_023339711.1|1877552_1878584_+	hypothetical protein	NA	A0A0M3LQZ1	Mannheimia_phage	52.6	6.2e-96
WP_032428666.1|1878623_1878911_+	hypothetical protein	NA	A0A0M3LR32	Mannheimia_phage	75.6	1.4e-13
WP_101825227.1|1878913_1879294_+	hypothetical protein	NA	F1C5E2	Cronobacter_phage	55.3	5.3e-29
WP_085012082.1|1879293_1879467_+	50S ribosomal protein L13	NA	I6R0P9	Salmonella_phage	54.4	3.2e-13
WP_040246669.1|1879466_1879829_+	hypothetical protein	NA	A0A0M3LSC9	Mannheimia_phage	49.2	1.3e-19
WP_087823412.1|1879831_1880200_+	hypothetical protein	NA	F1C5E3	Cronobacter_phage	82.8	5.0e-48
WP_149362296.1|1880196_1880580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038421580.1|1880638_1881403_+	immunoglobulin domain-containing protein	NA	G0ZNE6	Cronobacter_phage	42.6	3.3e-38
WP_149362297.1|1881470_1882184_+	hypothetical protein	NA	G0ZNE7	Cronobacter_phage	54.2	4.8e-63
WP_149362298.1|1882400_1882931_+	KilA-N domain-containing protein	NA	A0A2H4FQV0	Salmonella_phage	85.7	5.8e-82
WP_029503690.1|1882975_1883260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149362299.1|1883350_1883692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040181307.1|1883743_1884082_+	hypothetical protein	NA	H6WRV3	Salmonella_phage	57.3	1.0e-31
WP_048337553.1|1884137_1884608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149362300.1|1884699_1887273_+|tail	tail protein (tape measure)	tail	F1C5E9	Cronobacter_phage	36.0	2.9e-94
WP_085929673.1|1887600_1888769_-|transposase	IS3-like element ISEc52 family transposase	transposase	Q716C2	Shigella_phage	96.1	1.9e-178
WP_086074852.1|1889157_1889577_+	hypothetical protein	NA	F1C5F0	Cronobacter_phage	44.7	1.7e-23
WP_032419293.1|1889576_1890047_+	hypothetical protein	NA	R9TPR6	Aeromonas_phage	40.4	9.6e-28
WP_149362301.1|1890043_1890439_+	hypothetical protein	NA	F1C5F2	Cronobacter_phage	54.8	2.1e-36
WP_149362302.1|1890425_1892903_+	MoaD/ThiS family protein	NA	F1C5A7	Cronobacter_phage	45.3	1.8e-197
WP_149362303.1|1894988_1895789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065801522.1|1895893_1896133_+	hypothetical protein	NA	K7P7N3	Enterobacteria_phage	53.2	1.3e-17
>prophage 2
NZ_CP043562	Klebsiella pneumoniae strain P094-1 chromosome, complete genome	5058062	2529824	2540711	5058062		Escherichia_phage(87.5%)	9	NA	NA
WP_032424949.1|2529824_2532932_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
WP_004176258.1|2532986_2534252_+	MFS transporter	NA	NA	NA	NA	NA
WP_149362387.1|2534282_2535371_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	99.7	1.8e-210
WP_004176262.1|2535457_2535718_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
WP_001620095.1|2536015_2536876_+	class A broad-spectrum beta-lactamase SHV-1	NA	A0A077SL40	Escherichia_phage	99.7	4.4e-156
WP_002210513.1|2536896_2537658_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_117022884.1|2537918_2538821_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	3.4e-159
WP_004224682.1|2538832_2540098_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.8	7.8e-234
WP_002210516.1|2540090_2540711_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 3
NZ_CP043562	Klebsiella pneumoniae strain P094-1 chromosome, complete genome	5058062	2932141	2940065	5058062	integrase	Phage_21(37.5%)	11	2926812:2926825	2942764:2942777
2926812:2926825	attL	CGCTGAACAGCATC	NA	NA	NA	NA
WP_004892953.1|2932141_2932294_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
WP_149362435.1|2932614_2932938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032413624.1|2932943_2933636_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_149362658.1|2935059_2935293_+	hypothetical protein	NA	M1FN76	Enterobacteria_phage	81.8	1.4e-27
WP_004864289.1|2935914_2936430_+	hypothetical protein	NA	A0A0P0ZBM8	Stx2-converting_phage	76.4	2.9e-70
WP_040176408.1|2936426_2936822_+	hypothetical protein	NA	A0A077K9V6	Edwardsiella_phage	33.8	1.0e-06
WP_040176407.1|2936814_2937033_+	hypothetical protein	NA	G8C7S3	Escherichia_phage	53.4	3.5e-09
WP_071953772.1|2937032_2937305_+	hypothetical protein	NA	K7PKM4	Enterobacterial_phage	39.4	9.8e-09
WP_000089156.1|2937333_2937570_+	excisionase	NA	NA	NA	NA	NA
WP_000741346.1|2937559_2938702_+|integrase	tyrosine-type recombinase/integrase	integrase	Q77Z02	Phage_21	82.2	9.1e-173
WP_004150800.1|2938814_2940065_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
2942764:2942777	attR	CGCTGAACAGCATC	NA	NA	NA	NA
>prophage 4
NZ_CP043562	Klebsiella pneumoniae strain P094-1 chromosome, complete genome	5058062	3213035	3222498	5058062	tRNA,protease	Brazilian_cedratvirus(16.67%)	8	NA	NA
WP_004209699.1|3213035_3214757_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
WP_002898014.1|3214801_3215503_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|3215856_3216075_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_149362480.1|3216194_3218474_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	2.1e-165
WP_002896520.1|3218504_3218822_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896516.1|3219147_3219369_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_004147781.1|3219445_3221386_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.0	5.0e-38
WP_002896440.1|3221382_3222498_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 5
NZ_CP043562	Klebsiella pneumoniae strain P094-1 chromosome, complete genome	5058062	4318391	4372379	5058062	transposase,protease	Sodalis_phage(14.29%)	53	NA	NA
WP_024264570.1|4318391_4319330_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	53.7	1.0e-68
WP_085920927.1|4319469_4320501_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_020802795.1|4320497_4321559_-	SIS domain-containing protein	NA	M1I2B0	Paramecium_bursaria_Chlorella_virus	23.4	3.8e-08
WP_012737365.1|4321571_4322411_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_002887608.1|4322400_4323180_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002887607.1|4323196_4323667_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_004888687.1|4323681_4324104_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_149362579.1|4324204_4326970_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_149362580.1|4327107_4328553_-	tagaturonate reductase	NA	NA	NA	NA	NA
WP_004151386.1|4328564_4329587_-	zinc-binding alcohol dehydrogenase family protein	NA	A0A2K9L7I1	Tupanvirus	27.3	1.7e-13
WP_004182856.1|4329723_4330638_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_016946270.1|4330817_4332179_+	MFS transporter	NA	NA	NA	NA	NA
WP_021313595.1|4332182_4333019_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002887560.1|4333051_4333585_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002887559.1|4333654_4334518_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004178521.1|4334514_4335114_-	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	NA	NA	NA	NA	NA
WP_032437850.1|4335100_4335973_-	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA	NA
WP_004151389.1|4335982_4337470_-	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_004177530.1|4337655_4338048_-	RidA family protein	NA	NA	NA	NA	NA
WP_149362581.1|4338058_4339498_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_004230613.1|4339475_4339655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002887552.1|4339698_4340919_+	amino acid deaminase	NA	NA	NA	NA	NA
WP_032415912.1|4341123_4342140_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_002887503.1|4342750_4343191_-	homoprotocatechuate degradation operon regulator HpaR	NA	NA	NA	NA	NA
WP_004146085.1|4343477_4344110_+	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	NA	NA	NA	NA	NA
WP_021313599.1|4344106_4344871_+	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	NA	NA	NA	NA	NA
WP_002887494.1|4344867_4346334_+	5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_149362582.1|4346335_4347193_+	3,4-dihydroxyphenylacetate 2,3-dioxygenase	NA	NA	NA	NA	NA
WP_004151392.1|4347202_4347583_+	5-carboxymethyl-2-hydroxymuconate Delta-isomerase	NA	NA	NA	NA	NA
WP_002887487.1|4347691_4348495_+	2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA	NA	NA	NA	NA
WP_002887479.1|4348505_4349303_+	4-hydroxy-2-oxoheptanedioate aldolase	NA	NA	NA	NA	NA
WP_002887477.1|4349324_4350683_+	4-hydroxyphenylacetate permease	NA	NA	NA	NA	NA
WP_004177537.1|4350692_4351583_+	4-hydroxyphenylacetate catabolism regulatory protein HpaA	NA	NA	NA	NA	NA
WP_019725350.1|4351808_4353371_+	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	NA	NA	NA	NA	NA
WP_002887467.1|4353390_4353903_+	4-hydroxyphenylacetate 3-monooxygenase reductase subunit	NA	NA	NA	NA	NA
WP_004118209.1|4355306_4355570_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_004118208.1|4355584_4355848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004118205.1|4356069_4356351_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000350436.1|4356385_4356955_+	small heat shock protein sHSP20	NA	NA	NA	NA	NA
WP_004118202.1|4357060_4359910_+	heat shock survival AAA family ATPase ClpK	NA	K4FB40	Cronobacter_phage	41.2	6.9e-129
WP_001446316.1|4359909_4360101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023205099.1|4360847_4360988_+|protease	ATP-dependent metalloprotease FtsH	protease	NA	NA	NA	NA
WP_004118198.1|4361075_4361534_+	small heat shock protein sHSP20-GI	NA	NA	NA	NA	NA
WP_032238607.1|4361556_4362471_+	heat resistance protein YfdX1	NA	NA	NA	NA	NA
WP_047670347.1|4362573_4363461_+	heat resistance protein YfdX2	NA	NA	NA	NA	NA
WP_001090779.1|4363550_4364162_+	heat resistance membrane protein HdeD-GI	NA	NA	NA	NA	NA
WP_047670350.1|4364241_4365387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000786814.1|4365376_4365817_+	heat resistance system thioredoxin Trx-GI	NA	A0A1J0GW78	Streptomyces_phage	37.2	5.8e-11
WP_023326110.1|4365820_4367530_+	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	NA	NA	NA
WP_001514138.1|4367532_4368030_+	heat resistance protein PsiE-GI	NA	NA	NA	NA	NA
WP_032238623.1|4368007_4368973_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_149362583.1|4368997_4370149_+|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	30.0	5.8e-26
WP_114456289.1|4371455_4372379_-|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	99.0	2.7e-175
