The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	9	39507	2940576	terminase,portal,tail,head,capsid,plate	Staphylococcus_phage(84.48%)	61	NA	NA
WP_000524043.1|9_1884_-	CHAP domain-containing protein	NA	Q4ZBP7	Staphylococcus_phage	100.0	0.0e+00
WP_149590246.1|2020_2320_-	DUF2951 family protein	NA	Q4ZBP8	Staphylococcus_phage	99.0	2.9e-46
WP_001790193.1|2360_2534_-	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
WP_000705909.1|2537_2915_-	DUF2977 domain-containing protein	NA	A9CRC6	Staphylococcus_phage	100.0	5.6e-55
WP_000634519.1|2914_4738_-|plate	BppU family phage baseplate upper protein	plate	B2ZYZ8	Staphylococcus_phage	99.5	0.0e+00
WP_000323259.1|4737_6636_-	hypothetical protein	NA	Q4ZBQ2	Staphylococcus_phage	100.0	0.0e+00
WP_001144706.1|6648_8532_-	hypothetical protein	NA	A0A0H4ITY6	Staphylococcus_phage	99.0	0.0e+00
WP_000560196.1|8542_9478_-|tail	phage tail protein	tail	R4IH41	Staphylococcus_phage	100.0	8.2e-180
WP_001606770.1|9492_12462_-	hypothetical protein	NA	Q4ZAG7	Staphylococcus_virus	98.9	3.2e-262
WP_001580347.1|12464_12806_-	hypothetical protein	NA	A0A2H4PQL5	Staphylococcus_phage	100.0	3.5e-56
WP_000141082.1|12826_13321_-	hypothetical protein	NA	R4IFM1	Staphylococcus_phage	100.0	4.3e-87
WP_001606768.1|13382_13943_-	hypothetical protein	NA	A0A0H4ITY2	Staphylococcus_phage	99.5	2.2e-100
WP_000270196.1|13929_14367_-	DUF3168 domain-containing protein	NA	A0A0E3T9M9	Staphylococcus_phage	100.0	2.1e-77
WP_001151335.1|14379_14793_-	HK97 gp10 family phage protein	NA	R4IG77	Staphylococcus_phage	100.0	2.0e-77
WP_000482986.1|14779_15115_-|head	phage head closure protein	head	A0A2H4PQL0	Staphylococcus_phage	100.0	3.0e-60
WP_000338935.1|15107_15422_-|head,tail	phage head-tail adapter protein	head,tail	R4IFL8	Staphylococcus_phage	100.0	4.0e-54
WP_000278799.1|15421_15748_-	hypothetical protein	NA	A0A0E3TAL3	Staphylococcus_phage	100.0	4.3e-51
WP_001135558.1|15764_16589_-|capsid	N4-gp56 family major capsid protein	capsid	R4IH32	Staphylococcus_phage	100.0	5.6e-148
WP_000366932.1|16609_17206_-	hypothetical protein	NA	R4IG73	Staphylococcus_phage	100.0	5.6e-73
WP_001795666.1|17303_18284_-	hypothetical protein	NA	Q4ZAW9	Staphylococcus_virus	98.2	3.3e-179
WP_001159668.1|18222_19701_-|portal	phage portal protein	portal	Q4ZB45	Staphylococcus_virus	99.6	3.3e-284
WP_001606760.1|19654_20863_-|terminase	PBSX family phage terminase large subunit	terminase	R4IG95	Staphylococcus_phage	100.0	6.1e-236
WP_029656172.1|20855_21173_-	hypothetical protein	NA	A0A2I6PCU5	Staphylococcus_phage	95.2	7.3e-48
WP_000162702.1|21677_22100_-	RinA family phage transcriptional activator	NA	Q4ZBJ7	Staphylococcus_phage	100.0	1.2e-74
WP_000990005.1|22123_22270_-	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	2.2e-15
WP_001796216.1|22270_22486_-	hypothetical protein	NA	A0A0H3U4U1	Staphylococcus_phage	73.2	1.3e-16
WP_001072794.1|22478_22682_-	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	98.5	8.8e-31
WP_000195769.1|22678_22885_-	DUF1381 domain-containing protein	NA	A0A1W6JPY0	Staphylococcus_phage	97.1	1.6e-19
WP_000120374.1|22881_23127_-	hypothetical protein	NA	A9CR89	Staphylococcus_phage	100.0	6.5e-28
WP_000185642.1|23163_23697_-	dUTP pyrophosphatase	NA	A0A059T5A7	Staphylococcus_phage	97.2	2.1e-92
WP_001065070.1|23689_23938_-	DUF1024 family protein	NA	Q9B0F3	Staphylococcus_virus	96.3	3.5e-37
WP_000144703.1|23930_24239_-	hypothetical protein	NA	Q6R826	Staphylococcus_virus	96.1	8.4e-49
WP_000979209.1|24235_24583_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000695764.1|24579_24984_-	hypothetical protein	NA	S4V6D5	Staphylococcus_phage	90.3	1.3e-60
WP_001126831.1|24996_25245_-	hypothetical protein	NA	S4SVD3	Staphylococcus_phage	98.8	1.6e-42
WP_000241093.1|25245_25617_-	hypothetical protein	NA	A7TWN6	Staphylococcus_phage	94.3	3.7e-51
WP_001187266.1|25617_25803_-	DUF3113 family protein	NA	A0A1X9H0T9	Staphylococcus_phage	95.1	6.0e-26
WP_000049789.1|25807_26212_-	DUF1064 domain-containing protein	NA	A0A059T5A5	Staphylococcus_phage	97.0	7.1e-72
WP_001123692.1|26222_26444_-	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	98.6	4.9e-35
WP_000256594.1|26456_26615_-	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	98.1	4.5e-22
WP_149590247.1|26608_27388_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	98.8	6.0e-144
WP_000504988.1|27398_28202_-	replication protein	NA	A0A2H4JCF5	uncultured_Caudovirales_phage	100.0	1.1e-121
WP_054105103.1|28173_28869_-	hypothetical protein	NA	A0A2H4JAQ0	uncultured_Caudovirales_phage	100.0	1.9e-133
WP_000934784.1|28882_29311_-	single-stranded DNA-binding protein	NA	A0A2H4JHI1	uncultured_Caudovirales_phage	100.0	6.0e-61
WP_000139720.1|29310_29934_-	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000815403.1|29926_30148_-	DUF2483 domain-containing protein	NA	A0A1X9H047	Staphylococcus_phage	100.0	1.2e-33
WP_000291089.1|30157_30418_-	DUF1108 family protein	NA	Q4ZBM7	Staphylococcus_phage	100.0	1.2e-43
WP_000066021.1|30509_30671_-	DUF1270 family protein	NA	Q4ZBM9	Staphylococcus_phage	100.0	3.8e-21
WP_000395455.1|30850_31081_+	hypothetical protein	NA	C8CGY3	Staphylococcus_phage	100.0	2.3e-35
WP_001606750.1|31256_31997_-	phage antirepressor protein	NA	G4KNN1	Staphylococcus_phage	93.1	1.7e-124
WP_000933364.1|31998_32184_-	helix-turn-helix transcriptional regulator	NA	A0A0H4IP57	Staphylococcus_phage	98.4	1.7e-25
WP_000435350.1|32951_33398_-	hypothetical protein	NA	A0A1W6JPI3	Staphylococcus_phage	98.6	3.6e-77
WP_000272858.1|33410_33659_-	helix-turn-helix transcriptional regulator	NA	Q4ZBN5	Staphylococcus_phage	100.0	2.2e-39
WP_001260487.1|33822_34146_+	helix-turn-helix transcriptional regulator	NA	A0A0H3U2V8	Staphylococcus_phage	100.0	2.0e-53
WP_000525009.1|34158_34620_+	hypothetical protein	NA	W5R9J0	Staphylococcus_phage	100.0	1.2e-83
WP_000825944.1|34637_35141_+	hypothetical protein	NA	A9CR44	Staphylococcus_phage	98.8	8.3e-46
WP_000861313.1|35384_36770_+	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
WP_000290472.1|36886_37060_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_000872158.1|37139_37697_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000843611.1|37823_38963_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000401377.1|39024_39507_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
>prophage 2
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	91164	99637	2940576		Synechococcus_phage(33.33%)	9	NA	NA
WP_000238664.1|91164_91731_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_031806860.1|91733_92762_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.0e-61
WP_000483713.1|92754_94239_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000032727.1|94217_96407_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000666799.1|96399_97071_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|97072_97336_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|97335_98040_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010412.1|98043_99168_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|99154_99637_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
>prophage 3
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	263686	281697	2940576	terminase,integrase,coat	Staphylococcus_phage(80.77%)	30	263210:263226	279145:279161
263210:263226	attL	TTATTTAGCAGGAATAA	NA	NA	NA	NA
WP_000382163.1|263686_263887_-	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000139424.1|263873_263984_-	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	94.4	2.4e-11
WP_001795626.1|264054_264207_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	98.0	7.6e-19
WP_001035631.1|264579_265137_+	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
WP_000278085.1|265214_266015_-	staphylococcal enterotoxin type B	NA	A0A097PAT7	Streptococcus_pyogenes_phage	49.4	1.0e-53
WP_001293067.1|266322_266892_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
WP_000358777.1|266888_267230_-	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	98.2	1.4e-57
WP_000771368.1|267232_267760_-|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
WP_000448101.1|267810_268029_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000846285.1|268046_268625_-	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.4	1.4e-28
WP_001190615.1|268636_268978_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
WP_001019764.1|269494_270136_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	91.5	1.5e-108
WP_000998181.1|270132_270417_-	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.9e-47
WP_001039168.1|270418_270781_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
WP_000390455.1|271081_272539_-	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	96.1	1.0e-277
WP_031901882.1|272555_273425_-	mobile element-associated protein	NA	A0A1W6JQL5	Staphylococcus_phage	92.4	1.7e-155
WP_001103942.1|273488_273809_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	51.9	1.3e-20
WP_001058486.1|273811_274021_-	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
WP_000784875.1|274013_274160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000091731.1|274171_274444_-	winged helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	90.0	9.7e-41
WP_000243851.1|274436_274700_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	94.8	3.1e-36
WP_031901881.1|274892_275225_+	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC1	Staphylococcus_phage	75.2	2.7e-37
WP_000281657.1|275236_275695_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0H4J322	Staphylococcus_phage	83.0	5.1e-66
WP_001228759.1|275711_276143_+	hypothetical protein	NA	Q4ZCB6	Staphylococcus_virus	56.0	5.1e-36
WP_031901880.1|276212_276941_+	staphylococcal enterotoxin type Q	NA	A0EX09	Staphylococcus_phage	34.9	6.7e-28
WP_000733775.1|276964_277693_+	staphylococcal enterotoxin type K	NA	A0EX09	Staphylococcus_phage	32.3	1.9e-22
WP_000266157.1|277781_279002_+|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	47.5	6.4e-100
WP_000732326.1|279144_279966_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
279145:279161	attR	TTATTTAGCAGGAATAA	NA	NA	NA	NA
WP_000520233.1|279983_280679_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000571218.1|280671_281697_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	1.2e-27
>prophage 4
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	360407	375024	2940576		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000616842.1|360407_361169_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
WP_001245577.1|361165_362122_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|362108_363080_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|363118_363274_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|363617_364589_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855505.1|364706_366812_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|366774_367173_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068497.1|367973_368840_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|368859_369360_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|369700_371206_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_001790641.1|371283_371385_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429014.1|371475_372393_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_000197271.1|373072_373615_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663030.1|373965_375024_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
>prophage 5
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	386996	394816	2940576		Pandoravirus(16.67%)	10	NA	NA
WP_001217785.1|386996_388148_-	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
WP_000604514.1|388131_388725_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|389075_389744_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|389745_390165_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|390168_390882_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000637687.1|390980_391565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093553.1|391844_392285_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|392626_393100_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|393074_393761_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244412.1|393760_394816_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
>prophage 6
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	1891442	1949313	2940576	protease,terminase,integrase,portal,tail,head,capsid,holin	Staphylococcus_phage(97.1%)	77	1905342:1905359	1929978:1929995
WP_000197635.1|1891442_1892186_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000917289.1|1892360_1892645_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240645.1|1892753_1894370_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000128898.1|1895071_1895284_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	74.3	1.1e-23
WP_031806879.1|1895280_1895871_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	95.2	3.2e-97
WP_001797573.1|1896188_1896566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000022887.1|1896730_1897174_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001045079.1|1898026_1899334_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000825510.1|1899494_1900406_+	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000812008.1|1900467_1901313_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000206638.1|1901684_1902908_-	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000791407.1|1903342_1904398_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000595324.1|1904419_1905436_+	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.0	1.1e-25
1905342:1905359	attL	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
WP_000857176.1|1906554_1907592_-|integrase	site-specific integrase	integrase	A7TWL3	Staphylococcus_phage	100.0	3.4e-179
WP_000191459.1|1907699_1908314_+	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_001013104.1|1908310_1908457_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000705240.1|1908492_1908675_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_031783378.1|1908874_1909645_-	helix-turn-helix domain-containing protein	NA	A0A1P8L6G7	Staphylococcus_phage	99.6	1.1e-140
WP_000338186.1|1909803_1910028_+	DUF739 family protein	NA	A7TW90	Staphylococcus_phage	100.0	4.5e-36
WP_000435341.1|1910045_1910306_+	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_000351243.1|1910329_1910869_-	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
WP_001148337.1|1910925_1911675_+	antirepressor	NA	Q8SDM9	Staphylococcus_phage	99.6	4.4e-136
WP_001148861.1|1911690_1911888_+	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_000939496.1|1911918_1912059_+	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_000275058.1|1912073_1912706_-	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_001120197.1|1912764_1913085_+	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000066020.1|1913081_1913243_+	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_000291489.1|1913335_1913596_+	DUF1108 family protein	NA	A0A1W6JQ03	Staphylococcus_phage	100.0	7.6e-43
WP_001205732.1|1913604_1913868_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700565.1|1913876_1915820_+	AAA family ATPase	NA	A0A2I6PDH3	Staphylococcus_phage	99.1	0.0e+00
WP_000138481.1|1915821_1916742_+	recombinase	NA	A0A1V0E5D7	Staphylococcus_phage	100.0	1.0e-166
WP_161978214.1|1916750_1917440_+	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	1.0e-86
WP_000934770.1|1917440_1917911_+	single-stranded DNA-binding protein	NA	A0A0E3T9H6	Staphylococcus_phage	99.4	4.8e-80
WP_000148301.1|1917940_1918825_+	DnaD domain protein	NA	S4V6D4	Staphylococcus_phage	95.9	3.1e-136
WP_000338528.1|1918831_1919050_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401964.1|1919058_1919463_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0E3XBN4	Staphylococcus_phage	100.0	1.4e-72
WP_000101274.1|1919475_1919844_+	hypothetical protein	NA	W5RAK8	Staphylococcus_phage	100.0	8.2e-51
WP_000131366.1|1919847_1920090_+	hypothetical protein	NA	A0EWX8	Staphylococcus_phage	100.0	3.9e-41
WP_000982711.1|1920154_1920604_+	hypothetical protein	NA	A0A2I6PDH2	Staphylococcus_phage	99.3	2.1e-80
WP_001105598.1|1920600_1921110_+	hypothetical protein	NA	A0A1X9H0D4	Staphylococcus_phage	100.0	3.2e-93
WP_000197968.1|1921106_1921517_+	hypothetical protein	NA	A0A1X9H0B8	Staphylococcus_phage	100.0	2.3e-70
WP_015581851.1|1921509_1921998_+	DUF1024 family protein	NA	A0A0H3U313	Staphylococcus_phage	54.3	5.8e-12
WP_001066444.1|1921990_1922527_+	hypothetical protein	NA	A0A1X9H0S5	Staphylococcus_phage	100.0	1.4e-96
WP_000195820.1|1922563_1922770_+	DUF1381 domain-containing protein	NA	A0A1X9H0C2	Staphylococcus_phage	100.0	1.3e-21
WP_000595265.1|1922766_1922916_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000265039.1|1922915_1923116_+	DUF1514 family protein	NA	R9QT57	Staphylococcus_phage	98.5	1.4e-28
WP_000590126.1|1923143_1923560_+	hypothetical protein	NA	A0A1X9H0U8	Staphylococcus_phage	100.0	2.9e-76
WP_000988336.1|1923791_1924091_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000402904.1|1924220_1924565_+	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000625088.1|1924561_1926223_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000025274.1|1926238_1927426_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000861914.1|1927409_1928147_+|protease	Clp protease ClpP	protease	C8CH20	Staphylococcus_phage	100.0	2.3e-129
WP_000154555.1|1928170_1929316_+|capsid	phage major capsid protein	capsid	A0A1X9H072	Staphylococcus_phage	100.0	5.6e-215
WP_000238236.1|1929335_1929620_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|1929609_1929894_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|1929877_1930240_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
1929978:1929995	attR	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
WP_000114225.1|1930236_1930641_+	hypothetical protein	NA	A0A2I6PDJ6	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|1930637_1931045_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268741.1|1931045_1931690_+|tail	phage tail protein	tail	W5R9H4	Staphylococcus_phage	100.0	6.5e-120
WP_072050172.1|1931731_1931956_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	98.6	8.8e-32
WP_001096355.1|1932005_1932356_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_031836434.1|1932600_1937130_+|tail	phage tail tape measure protein	tail	A0A1X9H084	Staphylococcus_phage	99.9	0.0e+00
WP_000567408.1|1937126_1938611_+|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_031836433.1|1938626_1942409_+	phage minor structural protein	NA	A0A1X9H096	Staphylococcus_phage	99.4	0.0e+00
WP_001000058.1|1942401_1942554_+	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_001262621.1|1942599_1942887_+	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_000340977.1|1942942_1943317_+	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_000750412.1|1943689_1944463_+	staphylococcal enterotoxin type A	NA	A0A1X9H080	Staphylococcus_phage	100.0	1.1e-145
WP_011447039.1|1944571_1944748_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_031762631.1|1944800_1944908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|1944959_1945214_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|1945225_1945981_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000920038.1|1946171_1946663_+	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_001110820.1|1947352_1947649_+	peptidoglycan hydrolase	NA	A0A1P8L6B4	Staphylococcus_phage	95.9	1.6e-49
WP_000702263.1|1948159_1948510_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|1948562_1948823_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669791.1|1949133_1949313_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
>prophage 7
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	1968103	2013778	2940576	terminase,portal,tail,head,capsid,holin,plate	Staphylococcus_phage(72.31%)	66	NA	NA
WP_000149686.1|1968103_1968664_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275730.1|1969035_1970133_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	1.9e-47
WP_000323156.1|1970337_1971048_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
WP_000861313.1|1971015_1972401_-	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
WP_000525004.1|1972750_1973212_-	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_149590289.1|1973224_1973539_-	helix-turn-helix domain-containing protein	NA	A0A0N9BAW4	Staphylococcus_phage	99.0	3.7e-52
WP_001121027.1|1973690_1973927_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_001148544.1|1973940_1974717_+	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_000033736.1|1974904_1975114_-	hypothetical protein	NA	Q4ZDA8	Staphylococcus_virus	100.0	1.6e-35
WP_001148623.1|1975170_1975914_+	oxidoreductase	NA	Q4ZBN2	Staphylococcus_phage	100.0	6.8e-137
WP_000395455.1|1976089_1976320_-	hypothetical protein	NA	C8CGY3	Staphylococcus_phage	100.0	2.3e-35
WP_000066021.1|1976499_1976661_+	DUF1270 family protein	NA	Q4ZBM9	Staphylococcus_phage	100.0	3.8e-21
WP_000291089.1|1976752_1977013_+	DUF1108 family protein	NA	Q4ZBM7	Staphylococcus_phage	100.0	1.2e-43
WP_000815403.1|1977022_1977244_+	DUF2483 domain-containing protein	NA	A0A1X9H047	Staphylococcus_phage	100.0	1.2e-33
WP_000139720.1|1977236_1977860_+	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000934784.1|1977859_1978288_+	single-stranded DNA-binding protein	NA	A0A2H4JHI1	uncultured_Caudovirales_phage	100.0	6.0e-61
WP_054105103.1|1978301_1978997_+	hypothetical protein	NA	A0A2H4JAQ0	uncultured_Caudovirales_phage	100.0	1.9e-133
WP_000504988.1|1978968_1979772_+	replication protein	NA	A0A2H4JCF5	uncultured_Caudovirales_phage	100.0	1.1e-121
WP_149590247.1|1979782_1980562_+	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	98.8	6.0e-144
WP_000256594.1|1980555_1980714_+	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	98.1	4.5e-22
WP_001123692.1|1980726_1980948_+	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	98.6	4.9e-35
WP_000049789.1|1980958_1981363_+	DUF1064 domain-containing protein	NA	A0A059T5A5	Staphylococcus_phage	97.0	7.1e-72
WP_001187266.1|1981367_1981553_+	DUF3113 family protein	NA	A0A1X9H0T9	Staphylococcus_phage	95.1	6.0e-26
WP_000241093.1|1981553_1981925_+	hypothetical protein	NA	A7TWN6	Staphylococcus_phage	94.3	3.7e-51
WP_001126831.1|1981925_1982174_+	hypothetical protein	NA	S4SVD3	Staphylococcus_phage	98.8	1.6e-42
WP_000695764.1|1982186_1982591_+	hypothetical protein	NA	S4V6D5	Staphylococcus_phage	90.3	1.3e-60
WP_000979209.1|1982587_1982935_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000144703.1|1982931_1983240_+	hypothetical protein	NA	Q6R826	Staphylococcus_virus	96.1	8.4e-49
WP_001065070.1|1983232_1983481_+	DUF1024 family protein	NA	Q9B0F3	Staphylococcus_virus	96.3	3.5e-37
WP_000185642.1|1983473_1984007_+	dUTP pyrophosphatase	NA	A0A059T5A7	Staphylococcus_phage	97.2	2.1e-92
WP_000120374.1|1984043_1984289_+	hypothetical protein	NA	A9CR89	Staphylococcus_phage	100.0	6.5e-28
WP_000195769.1|1984285_1984492_+	DUF1381 domain-containing protein	NA	A0A1W6JPY0	Staphylococcus_phage	97.1	1.6e-19
WP_001072794.1|1984488_1984692_+	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	98.5	8.8e-31
WP_001796216.1|1984684_1984900_+	hypothetical protein	NA	A0A0H3U4U1	Staphylococcus_phage	73.2	1.3e-16
WP_000990005.1|1984900_1985047_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	2.2e-15
WP_000162696.1|1985070_1985493_+	RinA family phage transcriptional activator	NA	S4V7K2	Staphylococcus_phage	100.0	1.6e-74
WP_001003272.1|1985679_1986120_+|terminase	terminase small subunit	terminase	Q8SDV0	Staphylococcus_phage	100.0	2.8e-74
WP_000169945.1|1986106_1987384_+|terminase	PBSX family phage terminase large subunit	terminase	S4V685	Staphylococcus_phage	100.0	1.3e-249
WP_031836389.1|1987394_1988930_+|portal	phage portal protein	portal	Q4ZDV9	Staphylococcus_virus	99.2	2.7e-289
WP_001133044.1|1988936_1989932_+|head	phage head morphogenesis protein	head	A0A0F6N3F1	Staphylococcus_phage	100.0	2.0e-184
WP_000072208.1|1990004_1990175_+	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
WP_149590290.1|1990283_1990904_+	DUF4355 domain-containing protein	NA	B2ZYY4	Staphylococcus_phage	98.1	1.2e-75
WP_031768999.1|1990917_1991892_+|capsid	phage major capsid protein	capsid	S4V686	Staphylococcus_phage	99.7	2.8e-183
WP_001114086.1|1991913_1992201_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.4e-45
WP_000208960.1|1992209_1992542_+|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001268312.1|1992538_1992841_+	hypothetical protein	NA	A4ZFB6	Staphylococcus_virus	100.0	1.1e-50
WP_001017815.1|1992840_1993188_+	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_000188652.1|1993199_1993583_+	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	100.0	2.6e-68
WP_149590291.1|1993601_1994183_+|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	99.5	1.4e-105
WP_001100161.1|1994244_1994610_+	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
WP_000105584.1|1994639_1994984_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_149590292.1|1995000_1998465_+	hypothetical protein	NA	Q4ZDL9	Staphylococcus_virus	97.8	2.3e-264
WP_000350687.1|1998477_1999425_+|tail	phage tail family protein	tail	E0Y3M0	Staphylococcus_virus	99.0	3.0e-182
WP_031836391.1|1999433_2001335_+	peptidase	NA	Q8SDT5	Staphylococcus_phage	98.9	0.0e+00
WP_149590293.1|2001349_2003260_+	hypothetical protein	NA	Q4ZDD6	Staphylococcus_virus	96.9	0.0e+00
WP_149590294.1|2003259_2005083_+|plate	BppU family phage baseplate upper protein	plate	S4V7L3	Staphylococcus_phage	99.8	0.0e+00
WP_149590295.1|2005082_2005460_+	DUF2977 domain-containing protein	NA	S4V993	Staphylococcus_phage	84.8	8.4e-51
WP_001800921.1|2005463_2005637_+	XkdX family protein	NA	A0A059T7K6	Staphylococcus_phage	100.0	1.3e-27
WP_000466767.1|2005677_2005977_+	DUF2951 domain-containing protein	NA	S4V6E4	Staphylococcus_phage	100.0	1.3e-46
WP_000524032.1|2006113_2008006_+	CHAP domain-containing protein	NA	B7T0E8	Staphylococcus_virus	92.9	0.0e+00
WP_000276627.1|2008018_2009191_+|plate	BppU family phage baseplate upper protein	plate	A0A0N9BAZ1	Staphylococcus_phage	100.0	1.1e-197
WP_000398874.1|2009196_2009592_+	hypothetical protein	NA	A1KX48	Staphylococcus_virus	100.0	2.7e-68
WP_000354135.1|2009648_2010086_+|holin	phage holin	holin	S4V690	Staphylococcus_phage	100.0	1.2e-72
WP_001148142.1|2010066_2011512_+	CHAP domain-containing protein	NA	S4V6E6	Staphylococcus_phage	100.0	1.8e-295
WP_000238962.1|2012239_2013034_+	phosphatidylinositol kinase	NA	E0Y3N2	Staphylococcus_virus	100.0	4.9e-149
WP_000278828.1|2013040_2013778_+	hypothetical protein	NA	E0Y3N3	Staphylococcus_virus	100.0	4.4e-136
>prophage 8
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	2400683	2487424	2940576	tRNA,protease,terminase,portal,tail,head,capsid,holin,plate	Staphylococcus_phage(78.67%)	103	NA	NA
WP_000858789.1|2400683_2401976_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
WP_000525070.1|2402297_2404991_-	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000049919.1|2405014_2405986_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361544.1|2405972_2407175_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	42.5	3.2e-35
WP_000690027.1|2407179_2408322_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|2408562_2408880_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001827022.1|2409216_2409897_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000152734.1|2409968_2410556_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_000004947.1|2410545_2411121_-	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
WP_011443634.1|2411134_2412238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000245895.1|2412385_2413684_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776323.1|2413693_2414758_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269929.1|2414783_2415950_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
WP_000789522.1|2416335_2416536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442480.1|2416744_2417194_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001817755.1|2417285_2418230_-	heptaprenyl diphosphate synthase subunit II	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000774684.1|2418246_2418972_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450553.1|2418974_2419547_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_001043863.1|2419977_2420250_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161738.1|2420420_2421419_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|2421435_2422746_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133954.1|2422967_2424143_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_001789944.1|2424399_2424591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001789945.1|2424707_2424824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644395.1|2424854_2425514_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681756.1|2425590_2426559_+	asparaginase	NA	NA	NA	NA	NA
WP_001174260.1|2426673_2427660_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_001789943.1|2427820_2427937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000902119.1|2429673_2431053_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
WP_001163801.1|2431042_2431996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001151997.1|2432103_2432352_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186912.1|2432457_2433003_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_001789947.1|2433281_2433401_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000913219.1|2433599_2434514_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001033757.1|2434528_2434735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000472936.1|2434727_2435666_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476873.1|2435723_2436641_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000126130.1|2436731_2436947_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_149590306.1|2437669_2439124_-	CHAP domain-containing protein	NA	U5U7D2	Staphylococcus_phage	99.2	2.4e-287
WP_000339141.1|2439134_2439437_-|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000466784.1|2439572_2439872_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000916020.1|2439917_2440082_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_001166599.1|2440074_2440464_-	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_031806950.1|2440463_2441930_-|plate	BppU family phage baseplate upper protein	plate	A0A2I6PES7	Staphylococcus_phage	99.8	9.9e-273
WP_000429558.1|2441929_2443840_-	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000179858.1|2443855_2444146_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_031806952.1|2444145_2445729_-	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	99.8	1.3e-307
WP_001190533.1|2445737_2446562_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_001003424.1|2446561_2452762_-|tail	phage tail tape measure protein	tail	A0A1X9IGU9	Staphylococcus_phage	100.0	0.0e+00
WP_000438833.1|2452775_2452934_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_000589167.1|2452975_2453326_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000169127.1|2453383_2453839_-	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_000807541.1|2453930_2454572_-|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	99.1	5.0e-120
WP_001023802.1|2454606_2455002_-	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000110020.1|2455002_2455404_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_000395495.1|2455400_2455733_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	99.1	8.2e-58
WP_000050973.1|2455744_2456023_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_001142738.1|2456091_2457255_-|capsid	phage major capsid protein	capsid	M9QQM0	Staphylococcus_phage	100.0	4.2e-218
WP_000061862.1|2457266_2458040_-|protease	Clp protease ClpP	protease	M1TAZ4	Staphylococcus_phage	98.4	3.0e-135
WP_001100671.1|2458023_2459262_-|portal	phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.8	2.6e-234
WP_000153555.1|2459266_2460958_-|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
WP_000778932.1|2460947_2461253_-|terminase	terminase	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_000160689.1|2461381_2461696_-	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000513699.1|2461852_2462290_-	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
WP_001793488.1|2462302_2463670_-	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	100.0	1.7e-263
WP_000665202.1|2463650_2463941_-	VRR-NUC domain-containing protein	NA	U5U7A3	Staphylococcus_phage	99.0	7.1e-50
WP_001801650.1|2464074_2464173_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	3.7e-11
WP_000884870.1|2464281_2466729_-	hypothetical protein	NA	A0A2I6PEP4	Staphylococcus_phage	100.0	0.0e+00
WP_000265252.1|2467016_2467217_-	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
WP_000595263.1|2467284_2467437_-	transcriptional activator RinB	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
WP_000592205.1|2467433_2467820_-	hypothetical protein	NA	A0A0H3U465	Staphylococcus_phage	96.9	2.4e-61
WP_000195835.1|2467816_2468023_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	97.1	6.4e-29
WP_000185653.1|2468059_2468590_-	dUTP pyrophosphatase	NA	C8CH05	Staphylococcus_phage	100.0	1.7e-94
WP_001065071.1|2468582_2468831_-	DUF1024 family protein	NA	Q9B0F3	Staphylococcus_virus	97.6	2.0e-37
WP_000144703.1|2468823_2469132_-	hypothetical protein	NA	Q6R826	Staphylococcus_virus	96.1	8.4e-49
WP_000979209.1|2469128_2469476_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000695756.1|2469472_2469877_-	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	100.0	4.2e-72
WP_000693989.1|2469879_2470086_-	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_078064221.1|2470099_2470348_-	hypothetical protein	NA	M9NTB1	Staphylococcus_phage	97.5	1.7e-39
WP_000022736.1|2470347_2470602_-	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	100.0	1.3e-42
WP_000113974.1|2470601_2471003_-	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_001164629.1|2471002_2471188_-	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_001802096.1|2471200_2473153_-	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	100.0	0.0e+00
WP_000645048.1|2473220_2473778_-	DUF2815 family protein	NA	A0A2I6PEP8	Staphylococcus_phage	100.0	1.8e-97
WP_000762552.1|2473803_2474970_-	DUF2800 domain-containing protein	NA	A0A2I6PEL9	Staphylococcus_phage	100.0	1.4e-221
WP_000985980.1|2474966_2475329_-	hypothetical protein	NA	A0A2I6PEM7	Staphylococcus_phage	99.2	1.9e-55
WP_000291481.1|2475342_2475603_-	DUF1108 family protein	NA	A0A2I6PEM2	Staphylococcus_phage	100.0	3.4e-43
WP_000163431.1|2475607_2475910_-	DUF2482 family protein	NA	A0A1X9IGX2	Staphylococcus_phage	100.0	2.4e-48
WP_001285951.1|2476313_2476475_-	DUF1270 domain-containing protein	NA	A0A2I6PEK6	Staphylococcus_phage	100.0	1.1e-20
WP_001124198.1|2476486_2476750_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001036299.1|2476774_2476990_-	hypothetical protein	NA	A0A2I6PEK7	Staphylococcus_phage	100.0	1.0e-32
WP_001566045.1|2477036_2477276_+	hypothetical protein	NA	A0A2I6PE22	Staphylococcus_phage	98.7	7.4e-37
WP_001115060.1|2477532_2477724_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PEL6	Staphylococcus_phage	100.0	2.3e-28
WP_000429766.1|2477884_2478214_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PEN2	Staphylococcus_phage	100.0	3.2e-54
WP_000525000.1|2478226_2478688_+	hypothetical protein	NA	A0A2I6PEK4	Staphylococcus_phage	99.3	1.3e-85
WP_000755718.1|2478705_2479140_+	hypothetical protein	NA	A0A2I6PEM0	Staphylococcus_phage	100.0	1.2e-24
WP_000449655.1|2479168_2479564_+	hypothetical protein	NA	A0A2I6PEJ7	Staphylococcus_phage	100.0	3.8e-70
WP_000227849.1|2479673_2479799_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	3.3e-12
WP_000191464.1|2479795_2480410_-	hypothetical protein	NA	M9QRQ8	Staphylococcus_phage	99.5	2.5e-105
WP_001566047.1|2481772_2483800_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	97.7	6.9e-115
WP_001548912.1|2483792_2484722_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987769.1|2484966_2486718_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
WP_000064078.1|2486698_2487424_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 9
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	2542548	2550860	2940576	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|2542548_2543334_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|2543459_2544350_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062180.1|2544359_2545706_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
WP_000683931.1|2545819_2546920_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624584.1|2546922_2547600_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|2547730_2548837_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217261.1|2549060_2550860_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 10
NZ_CP043302	Staphylococcus aureus strain 16445 chromosome, complete genome	2940576	2754657	2836870	2940576	protease,transposase,tRNA	Staphylococcus_phage(91.94%)	78	NA	NA
WP_031901888.1|2754657_2761218_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
WP_031806972.1|2761543_2761855_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001108732.1|2761876_2764291_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
WP_001025061.1|2764581_2765763_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526539.1|2765872_2766826_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|2766822_2767386_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|2767505_2767907_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|2769485_2770313_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|2770315_2770435_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|2770546_2771548_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|2771669_2772134_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159022.1|2772146_2773328_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493892.1|2773338_2773971_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000384181.1|2773977_2775009_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	4.8e-197
WP_001261677.1|2775501_2777004_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000221179.1|2777526_2777841_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_000989121.1|2777840_2779133_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000163235.1|2779150_2779546_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_001032833.1|2779840_2780695_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|2780970_2781195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671052.1|2781393_2781864_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_001153742.1|2781976_2782420_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030465.1|2782406_2782850_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
WP_001168904.1|2783145_2783781_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|2784220_2784934_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|2785193_2785496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|2785751_2786117_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623471.1|2786113_2786467_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453320.1|2788549_2789383_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
WP_000366154.1|2789594_2790503_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
WP_000933822.1|2790627_2791821_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_031806974.1|2792191_2793784_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_000093392.1|2793919_2794405_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_002868962.1|2794779_2795526_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000672014.1|2795530_2796004_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|2796069_2796327_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778523.1|2796323_2797325_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
WP_000348360.1|2797329_2798808_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
WP_011443643.1|2798966_2799422_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_001795535.1|2799724_2800375_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
WP_031806886.1|2800455_2801466_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.2e-73
WP_000093392.1|2801569_2802055_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_000669046.1|2802267_2802894_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
WP_000627551.1|2802934_2803279_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
WP_000414205.1|2803376_2803928_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
WP_000494956.1|2804145_2804787_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
WP_000809857.1|2804900_2805086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|2805087_2805264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070811.1|2805274_2805658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549059.1|2806261_2806405_-|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_001801861.1|2806607_2806703_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791893.1|2806825_2806927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002868972.1|2807274_2807634_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000831218.1|2808172_2812285_-	SMEK domain-containing protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
WP_000072576.1|2813134_2814334_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
WP_011443644.1|2814326_2816066_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	4.4e-288
WP_001791797.1|2816046_2816181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038688.1|2816245_2816965_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
WP_001038759.1|2817115_2817832_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_011447030.1|2817933_2818041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|2817989_2818709_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001038867.1|2818829_2819549_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
WP_001039447.1|2819606_2820329_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001039435.1|2820453_2821161_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
WP_001092763.1|2822124_2822691_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
WP_000586140.1|2823164_2823863_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_000581552.1|2823859_2824621_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_001096791.1|2824617_2825310_-	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000691541.1|2825332_2826706_-	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_000504439.1|2826715_2827234_-	enterotoxin	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000566596.1|2827249_2828494_-	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_001092605.1|2828486_2831480_-	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
WP_000416756.1|2831544_2831688_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_000416759.1|2832424_2832568_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000782464.1|2832809_2833793_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_031806869.1|2833794_2834730_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.8e-174
WP_001790220.1|2835529_2836069_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
WP_000206350.1|2836081_2836870_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
