The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	0	24244	2939465	protease,head,capsid,tail,holin,portal,terminase	Staphylococcus_phage(100.0%)	28	NA	NA
WP_000625087.1|0_1662_+|terminase	terminase large subunit	terminase	Q8LTH3	Staphylococcus_phage	100.0	0.0e+00
WP_000025268.1|1677_2841_+|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
WP_000861911.1|2824_3562_+|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
WP_000154564.1|3584_4730_+|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	99.5	2.8e-214
WP_000238236.1|4749_5034_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5023_5308_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|5291_5654_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114341.1|5650_6055_+	HK97 gp10 family phage protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
WP_000565498.1|6051_6459_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000985141.1|6459_7101_+|tail	phage tail protein	tail	A0A1W6JPP5	Staphylococcus_phage	100.0	1.1e-119
WP_094969686.1|7061_7367_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	93.2	1.5e-29
WP_001096355.1|7417_7768_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_001549167.1|7818_7956_+	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_000504572.1|8012_12524_+|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	88.0	0.0e+00
WP_000567391.1|12520_14005_+|tail	phage tail family protein	tail	A0A068A242	Staphylococcus_phage	98.8	4.6e-294
WP_000582178.1|14020_17806_+	hypothetical protein	NA	A0A1P8L6B8	Staphylococcus_phage	99.8	0.0e+00
WP_001153681.1|17795_17948_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040261.1|17994_18282_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_000539688.1|18339_18636_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|18785_18962_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|19014_19122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|19173_19428_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|19439_20195_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000919350.1|20385_20877_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000727649.1|21956_22406_-	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_000702263.1|23090_23441_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|23493_23754_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|24064_24244_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
>prophage 2
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	29844	32291	2939465		Staphylococcus_phage(100.0%)	3	NA	NA
WP_000991306.1|29844_30741_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000645727.1|30741_31422_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763043.1|31418_32291_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
>prophage 3
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	38054	38456	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000205106.1|38054_38456_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
>prophage 4
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	42652	44679	2939465		Bacillus_virus(50.0%)	2	NA	NA
WP_000149686.1|42652_43213_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275729.1|43581_44679_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.9	6.7e-48
>prophage 5
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	48709	50993	2939465		Bacillus_virus(100.0%)	2	NA	NA
WP_000284436.1|48709_50179_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000040866.1|50171_50993_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
>prophage 6
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	54694	61461	2939465		Gordonia_phage(33.33%)	5	NA	NA
WP_000572878.1|54694_55990_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|56098_56401_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272056.1|56572_57265_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992924.1|57261_59454_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774556.1|59457_61461_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
>prophage 7
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	68635	73664	2939465		Catovirus(33.33%)	5	NA	NA
WP_001231451.1|68635_69583_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
WP_001147865.1|69663_71025_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.6	1.4e-103
WP_000548781.1|71194_71725_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140172.1|71971_73042_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613738.1|73109_73664_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
>prophage 8
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	77116	77530	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001557448.1|77116_77530_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	38.3	6.7e-17
>prophage 9
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	82584	83214	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|82584_83214_+	two-component system response regulator VraR	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 10
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	98694	100431	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|98694_100431_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 11
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	113652	222205	2939465	tRNA,transposase,protease	Staphylococcus_phage(92.59%)	100	NA	NA
WP_001557163.1|113652_114972_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000063580.1|115555_116617_+	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_000649908.1|116874_118332_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_000590809.1|118324_119047_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
WP_000379980.1|119197_120325_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000181394.1|120329_120800_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_001251224.1|120958_121558_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000031108.1|121582_121735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000901023.1|122282_122678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000116228.1|122873_124259_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000669376.1|124711_125533_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000437969.1|125695_126808_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_001045135.1|126829_127453_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000375864.1|127808_128273_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000992518.1|128451_129576_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000290301.1|129644_129989_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_001802255.1|130527_130626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000238227.1|130916_132113_+	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_000584628.1|132102_135039_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001244175.1|135035_135977_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_150030547.1|136097_137060_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_000477959.1|137264_137822_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000648118.1|138556_138922_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000004981.1|139063_139486_-	HIT family protein	NA	NA	NA	NA	NA
WP_000216874.1|139619_140360_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_000551836.1|140352_141576_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000737976.1|141699_142203_-	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_001790154.1|142365_142476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086154351.1|142465_143503_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_000162881.1|143560_144484_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000167542.1|144507_145908_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000132890.1|146230_146785_+	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_010922839.1|148145_148928_+	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_000821658.1|149208_149928_+	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
WP_000713847.1|149962_150691_+	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
WP_001236362.1|151654_152410_+	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
WP_000736712.1|152692_153469_+	staphylococcal enterotoxin type G	NA	NA	NA	NA	NA
WP_000848318.1|154020_154797_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000617704.1|154817_155054_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001253432.1|155131_155626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000206343.1|156459_157248_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	98.5	3.6e-144
WP_000473596.1|158611_159547_+	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782463.1|159548_160532_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000543854.1|160901_161693_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000550252.1|161697_162171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092778.1|163117_163699_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.2	4.8e-53
WP_001039427.1|164661_165369_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001039454.1|165493_166216_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001038872.1|166273_166993_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001038752.1|167113_167833_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_011447030.1|167781_167889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|167990_168710_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_001791797.1|168772_168907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000028669.1|169070_170627_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
WP_000072627.1|170619_171849_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_001792025.1|172924_173026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001801861.1|173148_173244_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_000414216.1|174598_175171_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_000627540.1|175271_175613_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000669024.1|175653_176280_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_150030548.1|176354_177350_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.1	7.6e-67
WP_001838777.1|177430_178081_-	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	93.5	6.5e-51
WP_012840523.1|178383_178839_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_000348364.1|178997_180476_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_000778528.1|180480_181482_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000718107.1|181478_181736_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672013.1|181801_182275_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_001822900.1|182279_183026_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000109906.1|183403_184996_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000933820.1|185367_186564_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000366163.1|186685_187594_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000453306.1|187805_188639_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000623470.1|190635_190989_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_001200542.1|190985_191351_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091442.1|191606_191909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096495.1|192168_192882_+	transaldolase	NA	M1PR54	Cyanophage	35.3	9.4e-19
WP_001168903.1|193321_193957_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|194252_194696_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|194682_195126_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671057.1|195238_195709_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_000384171.1|195907_196132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|196407_197262_+	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989121.1|197348_198641_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221177.1|198640_198955_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_001261668.1|199477_200980_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000077358.1|201460_202504_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
WP_000493887.1|202510_203143_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_001159037.1|203153_204335_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_001008549.1|204347_204812_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001196362.1|204933_205935_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001790712.1|206046_206166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|206168_206996_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|207567_207969_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|208091_208655_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|208651_209605_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025067.1|209714_210896_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_001557386.1|211183_213601_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_000836461.1|213622_213934_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001050566.1|214259_220820_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000285020.1|220936_222205_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	99.1	9.1e-57
>prophage 12
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	233610	238938	2939465		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091387.1|233610_234468_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	100.0	6.8e-72
WP_001048368.1|234496_235093_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118314.1|235113_238938_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
>prophage 13
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	247678	249385	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862095.1|247678_249385_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.8	2.1e-274
>prophage 14
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	255989	258620	2939465	tRNA	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186029.1|255989_257252_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
WP_001279338.1|257345_258620_-	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 15
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	262389	266522	2939465		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808849.1|262389_263994_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
WP_000291420.1|263980_265138_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553924.1|265252_265699_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174284.1|265778_266522_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.4	1.7e-18
>prophage 16
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	285635	288833	2939465		Streptomyces_phage(100.0%)	1	NA	NA
WP_000226921.1|285635_288833_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.4	1.2e-134
>prophage 17
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	293766	295524	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232647.1|293766_295524_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	2.6e-41
>prophage 18
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	300408	308572	2939465		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080028.1|300408_301113_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_015445861.1|301112_302774_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_000849428.1|303272_304760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038317.1|305053_307684_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114454.1|307699_308572_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.6e-42
>prophage 19
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	312487	323640	2939465	tRNA,protease	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808621.1|312487_313408_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_001790562.1|313500_313623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435143.1|313820_315758_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	35.8	5.0e-115
WP_000049145.1|316183_317677_+	amino acid permease	NA	NA	NA	NA	NA
WP_086154346.1|317905_318433_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.8	1.8e-11
WP_001125540.1|318461_318662_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|318708_319065_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032657.1|319206_319815_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001280022.1|319833_320763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|320767_320878_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127573.1|320925_322227_+	trigger factor	NA	NA	NA	NA	NA
WP_000472302.1|322377_323640_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
>prophage 20
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	333207	339854	2939465	tRNA,integrase	Catovirus(50.0%)	4	334179:334195	346409:346425
WP_000425353.1|333207_335838_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
334179:334195	attL	TTTAAAAGAACAAGATT	NA	NA	NA	NA
WP_001108346.1|335850_337122_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000261115.1|337391_338099_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_000868132.1|338768_339854_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
346409:346425	attR	TTTAAAAGAACAAGATT	NA	NA	NA	NA
>prophage 21
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	343185	343917	2939465		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|343185_343917_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 22
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	352484	388097	2939465	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_001005768.1|352484_353489_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019178.1|353490_354516_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|354538_355678_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|355696_355957_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|356231_358511_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000595011.1|358713_360987_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000364542.1|361008_361527_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_001058587.1|361954_364144_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869983.1|364155_364608_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717809.1|364604_365480_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|365940_367203_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044799.1|367218_368985_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_001790559.1|369317_369446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682646.1|369445_370219_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102729.1|370379_371654_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.4e-105
WP_000704122.1|371738_372161_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|372260_372443_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|372482_372629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985878.1|372865_373879_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409157.1|374190_375333_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	30.8	5.4e-32
WP_000066097.1|375333_376452_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567017.1|377146_377815_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283312.1|377816_380294_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_150030550.1|380636_383267_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	5.5e-64
WP_000426912.1|383329_383590_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|383593_384022_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|384036_384345_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342258.1|384629_385268_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	3.2e-10
WP_000137774.1|385270_386194_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|386205_387474_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|387473_388097_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 23
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	394769	395990	2939465		Lactococcus_phage(100.0%)	1	NA	NA
WP_000542320.1|394769_395990_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	33.3	2.2e-52
>prophage 24
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	404776	410940	2939465		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|404776_405238_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_001557362.1|405242_407444_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.2	1.6e-32
WP_001282563.1|407500_408475_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|408519_408771_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_150030551.1|409116_410940_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	4.7e-22
>prophage 25
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	414434	417542	2939465		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034716.1|414434_416267_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_001119021.1|416402_417542_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.8	1.2e-26
>prophage 26
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	424012	424960	2939465		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|424012_424960_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 27
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	428013	441759	2939465	tRNA	Klosneuvirus(28.57%)	13	NA	NA
WP_001030080.1|428013_429405_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
WP_001797828.1|429739_430363_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411298.1|430373_431192_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217257.1|431252_433070_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
WP_001283055.1|433293_434400_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624577.1|434530_435208_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683940.1|435210_436311_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_001062176.1|436424_437771_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_150030552.1|437780_438671_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.5	5.3e-27
WP_001213908.1|438796_439582_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564315.1|439623_440487_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095260.1|440473_440884_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|441159_441759_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 28
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	447932	448556	2939465		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223008.1|447932_448556_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 29
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	454101	456913	2939465		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019691.1|454101_455448_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.2	1.7e-61
WP_000202188.1|455440_456913_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	E3SN07	Prochlorococcus_phage	41.3	2.8e-81
>prophage 30
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	464413	470984	2939465		Indivirus(66.67%)	6	NA	NA
WP_001286928.1|464413_465751_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
WP_000159865.1|465743_465974_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183383.1|465951_466833_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.8	2.0e-10
WP_001124985.1|467264_467717_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942210.1|467732_469412_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291533.1|469562_470984_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
>prophage 31
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	477813	479220	2939465		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|477813_479220_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 32
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	485646	487131	2939465		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|485646_487131_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 33
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	490658	586051	2939465	tRNA,integrase,protease,transposase,head,capsid,tail,holin,portal,plate,terminase	Staphylococcus_phage(75.0%)	114	497952:497969	544477:544494
WP_001171335.1|490658_491567_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	32.0	4.4e-05
WP_000365240.1|491648_492191_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000392691.1|492295_492745_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000447733.1|492793_493681_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183429.1|493758_494265_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273371.1|494356_495088_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368656.1|495080_495623_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159577.1|495615_496353_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064078.1|496485_497211_+	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987775.1|497191_498943_+	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
497952:497969	attL	CTAAAAATATTAGAGACA	NA	NA	NA	NA
WP_001557355.1|499186_500113_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001558502.1|500105_502133_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	100.0	1.6e-116
WP_000264751.1|502175_503381_-|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_000191470.1|503506_504121_+	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	99.5	2.5e-105
WP_001795334.1|504117_504264_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_000825949.1|504493_505078_-	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	99.5	9.0e-68
WP_000525004.1|505095_505557_-	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000333631.1|505569_505884_-	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	99.0	3.7e-52
WP_001121027.1|506035_506272_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_001148544.1|506285_507062_+	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_001025401.1|507090_507336_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001128433.1|507304_507670_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001097552.1|507724_507940_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001124194.1|507966_508230_+	helix-turn-helix domain-containing protein	NA	M1SVD9	Staphylococcus_phage	100.0	1.9e-46
WP_001285948.1|508242_508404_+	DUF1270 domain-containing protein	NA	A9CR58	Staphylococcus_phage	98.1	1.1e-20
WP_000174999.1|508482_508806_+	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	99.1	3.2e-51
WP_000985972.1|508820_509183_+	hypothetical protein	NA	B5WZM2	Staphylococcus_phage	100.0	8.3e-56
WP_000762552.1|509179_510346_+	DUF2800 domain-containing protein	NA	A0A2I6PEL9	Staphylococcus_phage	100.0	1.4e-221
WP_000645048.1|510371_510929_+	DUF2815 family protein	NA	A0A2I6PEP8	Staphylococcus_phage	100.0	1.8e-97
WP_001802096.1|510996_512949_+	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	100.0	0.0e+00
WP_086154326.1|512961_513147_+	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	98.4	2.1e-26
WP_000113974.1|513146_513548_+	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_000022736.1|513547_513802_+	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	100.0	1.3e-42
WP_078064221.1|513801_514050_+	hypothetical protein	NA	M9NTB1	Staphylococcus_phage	97.5	1.7e-39
WP_000693989.1|514063_514270_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_000695756.1|514272_514677_+	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	100.0	4.2e-72
WP_000979209.1|514673_515021_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000144703.1|515017_515326_+	hypothetical protein	NA	Q6R826	Staphylococcus_virus	96.1	8.4e-49
WP_001065088.1|515318_515567_+	DUF1024 family protein	NA	A0A2K9VBU0	Staphylococcus_phage	98.8	2.0e-37
WP_000185653.1|515559_516090_+	dUTP pyrophosphatase	NA	C8CH05	Staphylococcus_phage	100.0	1.7e-94
WP_000195803.1|516126_516333_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592205.1|516329_516716_+	hypothetical protein	NA	A0A0H3U465	Staphylococcus_phage	96.9	2.4e-61
WP_000595263.1|516712_516865_+	transcriptional activator RinB	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
WP_000265252.1|516932_517133_+	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
WP_000884870.1|517420_519868_+	virulence-associated E family protein	NA	A0A2I6PEP4	Staphylococcus_phage	100.0	0.0e+00
WP_072324141.1|519970_520075_-	hypothetical protein	NA	Q4ZCF8	Staphylococcus_virus	97.1	2.1e-12
WP_000665203.1|520208_520499_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_001802078.1|520479_521847_+	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	99.8	2.3e-263
WP_000513699.1|521859_522297_+	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
WP_000160689.1|522453_522768_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000778932.1|522896_523202_+|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_000153555.1|523191_524883_+|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
WP_001100671.1|524887_526126_+|portal	phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.8	2.6e-234
WP_000061862.1|526109_526883_+|protease	Clp protease ClpP	protease	M1TAZ4	Staphylococcus_phage	98.4	3.0e-135
WP_001142738.1|526894_528058_+|capsid	phage major capsid protein	capsid	M9QQM0	Staphylococcus_phage	100.0	4.2e-218
WP_000050973.1|528126_528405_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_000395495.1|528416_528749_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	99.1	8.2e-58
WP_000110020.1|528745_529147_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|529147_529543_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807541.1|529577_530219_+|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	99.1	5.0e-120
WP_000169127.1|530310_530766_+	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_000589167.1|530823_531174_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|531215_531374_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_001003455.1|531387_537588_+|tail	phage tail tape measure protein	tail	M9QQM6	Staphylococcus_phage	99.4	0.0e+00
WP_001190533.1|537587_538412_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384474.1|538420_540004_+|tail	phage tail protein	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_000179858.1|540003_540294_+	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_000429558.1|540309_542220_+	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000067127.1|542219_543686_+|plate	phage baseplate upper protein	plate	A0A2I6PES7	Staphylococcus_phage	100.0	1.5e-273
WP_001166599.1|543685_544075_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|544067_544232_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|544277_544577_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
544477:544494	attR	CTAAAAATATTAGAGACA	NA	NA	NA	NA
WP_000339146.1|544712_545015_+|holin	phage holin	holin	A0A2I6PET6	Staphylococcus_phage	100.0	7.0e-48
WP_000909213.1|545025_546480_+	N-acetylmuramoyl-L-alanine amidase	NA	U5U7D2	Staphylococcus_phage	100.0	2.6e-289
WP_001557163.1|547135_548455_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000126131.1|548721_548937_+	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_000476865.1|549026_549932_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476346.1|549989_550886_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001557351.1|550961_551216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000913243.1|551356_552313_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001186912.1|552714_553260_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001151997.1|553365_553614_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163798.1|553721_554675_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000902099.1|554664_556044_+	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
WP_000069289.1|556196_557657_+	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_001792205.1|557781_557898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001174258.1|558058_559045_+	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_000681750.1|559159_560128_-	asparaginase	NA	NA	NA	NA	NA
WP_000644391.1|560204_560864_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_001795818.1|560894_561047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001800578.1|561127_561319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000133961.1|561575_562751_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000165530.1|562972_564283_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000161745.1|564299_565298_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_001043863.1|565468_565741_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450555.1|566171_566744_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|566746_567472_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001096471.1|567473_568433_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|568524_568974_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|569182_569383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269921.1|569768_570935_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
WP_000776312.1|570960_572025_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_000253231.1|572034_573333_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000389524.1|573339_574584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000005212.1|574597_575173_+	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
WP_000154683.1|575162_575750_+	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_001827022.1|575821_576502_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000839926.1|576837_577155_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000690025.1|577398_578541_+	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000361540.1|578545_579748_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
WP_000049921.1|579734_580706_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525078.1|580729_583423_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858779.1|583744_585037_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
WP_000362218.1|585364_586051_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	1.2e-07
>prophage 34
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	589791	590469	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_001795446.1|589791_590469_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.9e-24
>prophage 35
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	599743	600622	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_001133021.1|599743_600622_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.4e-19
>prophage 36
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	639234	648624	2939465		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282171.1|639234_639939_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_031888515.1|640183_640378_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000691942.1|640389_640641_+	NifU N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000404645.1|640678_641803_+	virulence factor C	NA	NA	NA	NA	NA
WP_000995287.1|641818_642256_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934894.1|642679_643636_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175746.1|643835_644315_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000166063.1|644329_645169_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	76.5	1.5e-47
WP_000159900.1|645254_645788_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913317.1|645780_646209_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473653.1|646220_646721_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|646720_646942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342131.1|647133_648624_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.2	2.3e-22
>prophage 37
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	652033	654045	2939465		Bacillus_phage(50.0%)	2	NA	NA
WP_000192137.1|652033_652693_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166801.1|652689_654045_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 38
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	660210	661002	2939465		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|660210_661002_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 39
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	664540	669571	2939465	lysis	Lactobacillus_phage(33.33%)	7	NA	NA
WP_000138415.1|664540_665677_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	9.7e-34
WP_001788788.1|665708_666338_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_001215907.1|666356_666626_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|666788_667097_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|667267_667468_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876201.1|667664_668066_+	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000216946.1|668305_669571_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
>prophage 40
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	677618	679220	2939465		Klosneuvirus(100.0%)	1	NA	NA
WP_000942303.1|677618_679220_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 41
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	684309	687763	2939465		Indivirus(50.0%)	3	NA	NA
WP_000079447.1|684309_685161_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000974847.1|685167_685809_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077571.1|685948_687763_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	5.1e-154
>prophage 42
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	691177	691879	2939465		Tupanvirus(100.0%)	1	NA	NA
WP_000571259.1|691177_691879_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	2.0e-13
>prophage 43
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	699977	702332	2939465		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000153613.1|699977_700760_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	35.9	2.7e-27
WP_000173833.1|700761_701760_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.9	8.5e-34
WP_000604813.1|701765_702332_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	31.6	1.5e-22
>prophage 44
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	706651	707914	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000283016.1|706651_707914_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.3	2.6e-96
>prophage 45
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	717573	721967	2939465		Bacillus_phage(50.0%)	2	NA	NA
WP_001289591.1|717573_719976_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.2	5.1e-93
WP_001557340.1|719975_721967_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	1.0e-115
>prophage 46
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	727958	729605	2939465		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|727958_729605_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 47
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	733274	734396	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691301.1|733274_734396_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 48
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	738546	744202	2939465		Phage_Wrath(25.0%)	6	NA	NA
WP_001208755.1|738546_739170_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	5.9e-17
WP_001797872.1|739549_740566_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	1.1e-15
WP_000688124.1|740587_741565_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.4	1.8e-185
WP_001085655.1|741721_741991_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|742444_742594_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000082539.1|742684_744202_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	2.3e-91
>prophage 49
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	754340	758616	2939465		Bacillus_phage(50.0%)	6	NA	NA
WP_000841351.1|754340_754874_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027143.1|755012_755201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000202390.1|755313_755916_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670307.1|755912_757004_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000603970.1|757007_757739_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000593436.1|757707_758616_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	3.1e-22
>prophage 50
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	764275	767303	2939465		Staphylococcus_phage(100.0%)	5	NA	NA
WP_000006110.1|764275_764461_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_001788716.1|764884_764995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002340.1|765694_765901_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_001795785.1|766194_766419_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.5	5.0e-19
WP_001793526.1|767105_767303_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
>prophage 51
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	772372	772849	2939465		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|772372_772849_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 52
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	778791	785273	2939465		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103743.1|778791_779610_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_001077635.1|780084_780627_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516269.1|780632_782642_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.0	4.8e-60
WP_000073352.1|782654_785273_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
>prophage 53
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	794687	795731	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|794687_795731_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 54
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	799929	805596	2939465		Bacillus_virus(33.33%)	4	NA	NA
WP_000664775.1|799929_801216_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	28.4	7.9e-16
WP_000089941.1|801215_802481_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	1.2e-40
WP_001293312.1|802511_803225_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000035746.1|803229_805596_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	7.3e-84
>prophage 55
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	810610	822423	2939465	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|810610_811582_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282298.1|811596_812514_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|812682_813033_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043635.1|813418_815536_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_000020853.1|815540_815858_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|815854_816139_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097460.1|816159_817335_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036633.1|817355_817823_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_001801936.1|818112_822423_-	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 56
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	826696	827467	2939465		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473699.1|826696_827467_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 57
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	832246	845918	2939465	protease,tRNA	Erwinia_phage(16.67%)	11	NA	NA
WP_000379044.1|832246_833650_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	2.9e-27
WP_000072681.1|833715_834261_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015601.1|834257_835154_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	3.6e-31
WP_000195254.1|835571_836879_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001557331.1|837034_839110_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000593194.1|839283_840156_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000672869.1|840328_841573_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041666.1|841600_842719_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_000110248.1|842945_843854_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	5.0e-17
WP_001020801.1|843875_845042_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176393.1|845150_845918_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 58
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	859302	861552	2939465		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|859302_860034_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|860149_860383_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|860817_861552_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 59
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	871922	873917	2939465		Moumouvirus(100.0%)	1	NA	NA
WP_000579563.1|871922_873917_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 60
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	877064	878000	2939465	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161291.1|877064_878000_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 61
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	883012	885269	2939465		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_000722165.1|883012_884212_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
WP_000933956.1|884427_884646_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368226.1|884645_885269_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	1.0e-21
>prophage 62
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	888583	889195	2939465		Pandoravirus(100.0%)	1	NA	NA
WP_001040248.1|888583_889195_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	1.6e-27
>prophage 63
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	893162	898699	2939465	transposase	Halovirus(25.0%)	5	NA	NA
WP_001190913.1|893162_894263_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_000767028.1|894264_895539_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016166.1|895556_896438_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_001178619.1|896465_897773_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
WP_001105984.1|898024_898699_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	3.8e-126
>prophage 64
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	903036	905790	2939465	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000384690.1|903036_905790_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	27.9	1.0e-89
>prophage 65
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	925373	925562	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245796.1|925373_925562_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	85.2	2.5e-19
>prophage 66
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	934578	1021857	2939465	tRNA,portal,head,capsid,holin,tail,plate,transposase,terminase	Staphylococcus_phage(80.56%)	111	NA	NA
WP_001802045.1|934578_934803_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	5.6e-18
WP_000765708.1|934759_934906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000857488.1|935578_936538_+	alpha-hemolysin	NA	A0A2H4PQH7	Staphylococcus_phage	30.3	7.4e-35
WP_001557163.1|936696_938016_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000231632.1|938534_938768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032817.1|939389_939575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001195973.1|939781_939979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000669537.1|940340_940691_-	complement inhibitor SCIN-B	NA	NA	NA	NA	NA
WP_000791581.1|940840_941338_-	complement convertase inhibitor Efb	NA	NA	NA	NA	NA
WP_000584398.1|941597_942104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000739564.1|942773_943175_+	formyl peptide receptor-like 1 inhibitory protein	NA	NA	NA	NA	NA
WP_000739210.1|943543_943873_-	complement convertase inhibitor Ecb	NA	NA	NA	NA	NA
WP_001791787.1|944066_944234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000049484.1|944361_944865_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_000659319.1|944857_945445_-	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_001039659.1|945456_946257_-	glutamate racemase	NA	NA	NA	NA	NA
WP_000139712.1|946492_947308_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_000818278.1|947307_949074_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_000079317.1|949125_949740_-	succinate dehydrogenase cytochrome b558 subunit	NA	NA	NA	NA	NA
WP_000390524.1|950063_951845_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_001788625.1|952010_952106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001018928.1|952168_952483_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249276.1|952655_955004_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.1	4.7e-14
WP_000161938.1|955013_956726_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
WP_000234068.1|956798_957320_-	CvpA family protein	NA	NA	NA	NA	NA
WP_000046704.1|957320_957587_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_001284282.1|957956_958895_+	ribonuclease HIII	NA	NA	NA	NA	NA
WP_000908969.1|959326_961729_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000003566.1|961728_962787_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
WP_000435374.1|963166_963907_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_001788617.1|964146_964254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000670950.1|964290_964614_-	staphylobilin-forming heme oxygenase IsdG	NA	NA	NA	NA	NA
WP_001242427.1|964632_965367_-	class B sortase	NA	NA	NA	NA	NA
WP_001548422.1|965428_966397_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_001220199.1|966406_967285_-	heme ABC transporter substrate-binding protein IsdE	NA	NA	NA	NA	NA
WP_001246685.1|967281_968358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000789821.1|968357_969041_-	heme uptake protein IsdC	NA	NA	NA	NA	NA
WP_000160859.1|969249_970302_+	LPXTG-anchored heme-scavenging protein IsdA	NA	NA	NA	NA	NA
WP_001041583.1|970504_972442_+	heme uptake protein IsdB	NA	NA	NA	NA	NA
WP_086154336.1|973173_974619_-	SH3 domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	99.8	1.4e-295
WP_000354127.1|974599_975037_-|holin	phage holin	holin	Q8SDS8	Staphylococcus_phage	99.3	6.9e-73
WP_031790226.1|975092_975488_-	hypothetical protein	NA	A0A0E3XBL9	Staphylococcus_phage	98.5	1.4e-67
WP_086154335.1|975492_976731_-|plate	BppU family phage baseplate upper protein	plate	E0Y3M8	Staphylococcus_virus	99.3	1.9e-208
WP_086154334.1|976743_978618_-	glucosaminidase domain-containing protein	NA	A7VMY9	Staphylococcus_phage	99.7	0.0e+00
WP_000466769.1|978754_979054_-	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
WP_001790193.1|979094_979268_-	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
WP_000705909.1|979271_979649_-	DUF2977 domain-containing protein	NA	A9CRC6	Staphylococcus_phage	100.0	5.6e-55
WP_150030556.1|979648_981472_-|plate	BppU family phage baseplate upper protein	plate	A0A0H4ISS3	Staphylococcus_phage	98.4	0.0e+00
WP_086154332.1|981471_983370_-	hypothetical protein	NA	A0A0H3U448	Staphylococcus_phage	96.5	0.0e+00
WP_150030557.1|983382_985269_-|tail	phage tail protein	tail	W5RAP4	Staphylococcus_phage	99.2	0.0e+00
WP_000560199.1|985279_986215_-|tail	phage tail family protein	tail	A0A0H4J355	Staphylococcus_phage	100.0	4.8e-180
WP_086154330.1|986229_989199_-|terminase	terminase	terminase	Q4ZAG7	Staphylococcus_virus	93.8	2.7e-261
WP_000204079.1|989201_989543_-	hypothetical protein	NA	W5R8J4	Staphylococcus_phage	100.0	3.5e-56
WP_000141084.1|989563_990058_-	hypothetical protein	NA	A0A0H4IPX9	Staphylococcus_phage	100.0	2.5e-87
WP_000046067.1|990119_990680_-	hypothetical protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
WP_000270194.1|990666_991104_-	DUF3168 domain-containing protein	NA	A0A0H4J350	Staphylococcus_phage	100.0	7.9e-77
WP_001151336.1|991116_991530_-	HK97 gp10 family phage protein	NA	A0A0H4IPA6	Staphylococcus_phage	100.0	3.4e-77
WP_000482988.1|991516_991852_-|head	phage head closure protein	head	A0A0H4ISR6	Staphylococcus_phage	100.0	1.0e-60
WP_000338934.1|991844_992159_-|head,tail	phage head-tail connector protein	head,tail	A0A0H4IPX4	Staphylococcus_phage	100.0	2.6e-53
WP_000278802.1|992158_992485_-	Rho termination factor N-terminal domain-containing protein	NA	A0A0H4ITX8	Staphylococcus_phage	100.0	1.2e-50
WP_001135533.1|992501_993326_-|capsid	N4-gp56 family major capsid protein	capsid	A0A0H4J347	Staphylococcus_phage	100.0	4.3e-148
WP_000366936.1|993346_993943_-	phage scaffolding protein	NA	A0A0H4IP83	Staphylococcus_phage	100.0	5.7e-102
WP_044119665.1|994040_995021_-|head	phage head morphogenesis protein	head	Q4ZAW9	Staphylococcus_virus	98.8	6.6e-180
WP_001159669.1|994959_996438_-|portal	phage portal protein	portal	Q4ZB45	Staphylococcus_virus	99.6	4.3e-284
WP_001807202.1|996391_997600_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0H4ITX6	Staphylococcus_phage	100.0	1.0e-235
WP_000594085.1|997592_998087_-	hypothetical protein	NA	A0A0H4J343	Staphylococcus_phage	100.0	8.4e-83
WP_000286968.1|998437_998839_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_086154329.1|998839_999013_-	transcriptional regulator	NA	A9CR97	Staphylococcus_phage	98.2	7.5e-23
WP_001072797.1|999005_999209_-	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	100.0	5.2e-31
WP_086154328.1|999205_999400_-	hypothetical protein	NA	A0A2I6PEC2	Staphylococcus_phage	95.3	1.9e-27
WP_000195827.1|999396_999603_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	76.5	1.4e-20
WP_086154327.1|999639_1000173_-	dUTP pyrophosphatase	NA	A0A059T5A7	Staphylococcus_phage	99.4	3.5e-95
WP_001065023.1|1000177_1000414_-	DUF1024 family protein	NA	C8CH04	Staphylococcus_phage	100.0	1.1e-35
WP_000979209.1|1000710_1001058_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_001668982.1|1001054_1001435_-	hypothetical protein	NA	A0A2K9VBT5	Staphylococcus_phage	100.0	8.4e-67
WP_000693989.1|1001437_1001644_-	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_001126839.1|1001657_1001906_-	hypothetical protein	NA	A0A1W6JPX8	Staphylococcus_phage	100.0	2.5e-43
WP_042907204.1|1001906_1002278_-	phage protein	NA	A0A1W6JPY5	Staphylococcus_phage	99.2	2.2e-51
WP_001187234.1|1002278_1002464_-	DUF3113 family protein	NA	A0A1W6JPY2	Staphylococcus_phage	100.0	8.3e-28
WP_000049804.1|1002468_1002873_-	DUF1064 domain-containing protein	NA	A0A1W6JPX0	Staphylococcus_phage	100.0	3.6e-68
WP_086154325.1|1002916_1003105_-	DUF3269 family protein	NA	Q4ZBL4	Staphylococcus_phage	100.0	3.4e-29
WP_001668921.1|1003270_1004050_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	99.6	1.9e-145
WP_000371250.1|1004859_1005717_+	DUF4393 domain-containing protein	NA	Q4ZBL8	Staphylococcus_phage	100.0	9.5e-159
WP_001199439.1|1005822_1006494_-	hypothetical protein	NA	A7TWM9	Staphylococcus_phage	100.0	2.0e-127
WP_000704705.1|1006506_1007058_-	single-stranded DNA-binding protein	NA	Q4ZBM4	Staphylococcus_phage	100.0	3.4e-101
WP_000134097.1|1007086_1007875_-	ATP-binding protein	NA	Q4ZBM5	Staphylococcus_phage	100.0	2.6e-142
WP_000815401.1|1007867_1008089_-	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000291089.1|1008098_1008359_-	DUF1108 family protein	NA	Q4ZBM7	Staphylococcus_phage	100.0	1.2e-43
WP_001668917.1|1008450_1008612_-	DUF1270 family protein	NA	Q4ZBM9	Staphylococcus_phage	98.1	1.9e-20
WP_000230552.1|1008604_1008742_-	hypothetical protein	NA	S4SX85	Staphylococcus_phage	100.0	3.2e-16
WP_086153461.1|1008791_1009439_+	hypothetical protein	NA	S4V9K2	Staphylococcus_phage	99.5	3.5e-113
WP_000939498.1|1009460_1009604_-	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000187184.1|1009643_1009868_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_070868489.1|1009868_1010636_-	phage antirepressor KilAC domain-containing protein	NA	B2ZYU5	Staphylococcus_phage	98.8	2.0e-139
WP_000394410.1|1010695_1011178_+	hypothetical protein	NA	A0A0N9BAX2	Staphylococcus_phage	100.0	1.1e-82
WP_000438352.1|1011278_1011458_-	hypothetical protein	NA	A0A0N9BAV3	Staphylococcus_phage	100.0	1.7e-25
WP_000282677.1|1011528_1012296_-	ParB N-terminal domain-containing protein	NA	Q4ZDB0	Staphylococcus_virus	100.0	2.3e-140
WP_000904049.1|1012288_1013170_-	ParB N-terminal domain-containing protein	NA	Q4ZDB2	Staphylococcus_virus	100.0	6.8e-152
WP_001113664.1|1013209_1013419_-	helix-turn-helix transcriptional regulator	NA	Q4ZDB3	Staphylococcus_virus	100.0	4.8e-32
WP_000455972.1|1013581_1013908_+	helix-turn-helix transcriptional regulator	NA	A0A059T5A2	Staphylococcus_phage	100.0	7.0e-54
WP_086154324.1|1013929_1014391_+	toxin	NA	Q4ZDB5	Staphylococcus_virus	98.0	1.3e-82
WP_000392109.1|1014422_1015103_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
WP_000861313.1|1015309_1016695_+	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
WP_000290472.1|1016811_1016985_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_000872158.1|1017064_1017622_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000843611.1|1017748_1018888_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000401377.1|1018949_1019432_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263796.1|1019433_1019976_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814565.1|1020045_1020435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|1020437_1020692_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757575.1|1020930_1021857_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	2.2e-12
>prophage 67
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1033374	1035222	2939465		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|1033374_1035222_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 68
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1043354	1052187	2939465		Mycoplasma_phage(25.0%)	9	NA	NA
WP_069993508.1|1043354_1044449_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.1e-37
WP_001020625.1|1044461_1045001_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455597.1|1045144_1045420_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|1045587_1046994_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000863439.1|1046997_1048290_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068176.1|1048380_1049358_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035320.1|1049361_1050474_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000668336.1|1050644_1051271_-	YkyA family protein	NA	NA	NA	NA	NA
WP_000957037.1|1051635_1052187_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.0	1.6e-13
>prophage 69
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1058199	1062579	2939465		Bacillus_virus(50.0%)	5	NA	NA
WP_001289618.1|1058199_1058433_+	glutaredoxin-like protein NrdH	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040051.1|1058669_1060388_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|1060390_1060657_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505966.1|1060810_1061353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000685067.1|1061406_1062579_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	4.0e-75
>prophage 70
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1066010	1080772	2939465		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921965.1|1066010_1067411_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
WP_000273253.1|1067403_1068210_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101899.1|1068476_1069724_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709277.1|1069745_1071224_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	3.2e-77
WP_000238669.1|1071238_1071805_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000030811.1|1071807_1072836_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000483720.1|1072828_1074313_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000032740.1|1074291_1076481_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000666806.1|1076473_1077145_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|1077146_1077410_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|1077409_1078114_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010413.1|1078117_1079242_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|1079228_1079711_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_000225836.1|1079911_1080772_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.8	4.4e-39
>prophage 71
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1091226	1094973	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074537.1|1091226_1094973_+	glucosaminidase domain-containing protein	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	1.1e-54
>prophage 72
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1098639	1099650	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000676537.1|1098639_1099650_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	32.3	6.2e-16
>prophage 73
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1108024	1111670	2939465		Enterococcus_phage(50.0%)	7	NA	NA
WP_000867357.1|1108024_1108240_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_001790177.1|1108303_1108435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081351.1|1108480_1109440_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766009.1|1109927_1110284_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001792054.1|1110372_1110510_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_001795266.1|1110650_1110941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571167.1|1111028_1111670_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
>prophage 74
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1121864	1127075	2939465	protease	Pithovirus(33.33%)	3	NA	NA
WP_001838748.1|1121864_1124189_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928413.1|1124407_1125211_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001049950.1|1125512_1127075_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
>prophage 75
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1146007	1147816	2939465		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082725.1|1146007_1147816_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
>prophage 76
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1153628	1155598	2939465		Bacillus_virus(100.0%)	2	NA	NA
WP_000427767.1|1153628_1154609_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	1.3e-15
WP_001067052.1|1154611_1155598_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	1.4e-15
>prophage 77
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1159249	1161263	2939465		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000786734.1|1159249_1160191_-	ATP-binding cassette domain-containing protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
WP_000140052.1|1160180_1161263_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
>prophage 78
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1169854	1176664	2939465		Micromonas_sp._RCC1109_virus(33.33%)	4	NA	NA
WP_000619360.1|1169854_1171000_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.0	1.5e-05
WP_001047069.1|1171109_1171979_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000353954.1|1172037_1174647_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001044230.1|1174849_1176664_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
>prophage 79
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1183304	1186958	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000154921.1|1183304_1186958_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	2.0e-24
>prophage 80
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1197112	1204104	2939465		Staphylococcus_phage(33.33%)	6	NA	NA
WP_000185319.1|1197112_1198042_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	3.7e-39
WP_000138487.1|1198378_1199623_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_150030559.1|1199731_1200922_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.5	5.0e-33
WP_000838029.1|1201229_1202357_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1202718_1203096_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035058.1|1203510_1204104_-	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
>prophage 81
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1214024	1217652	2939465		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009692.1|1214024_1215500_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	4.5e-47
WP_000046076.1|1215630_1216839_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001143495.1|1217292_1217652_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.7e-14
>prophage 82
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1221695	1224364	2939465		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1221695_1222910_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129659.1|1222906_1224364_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.5	2.6e-39
>prophage 83
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1239178	1242701	2939465		environmental_halophage(50.0%)	3	NA	NA
WP_001006450.1|1239178_1240429_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.1e-110
WP_000205567.1|1240534_1241842_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1241939_1242701_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 84
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1246189	1247215	2939465		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571207.1|1246189_1247215_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	9.4e-28
>prophage 85
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1250531	1255729	2939465		Streptococcus_phage(50.0%)	7	NA	NA
WP_000589549.1|1250531_1250888_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001147952.1|1251031_1251352_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	3.1e-06
WP_000422908.1|1251502_1252042_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150011.1|1252124_1252841_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.1	1.5e-16
WP_000974460.1|1252988_1253411_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1253809_1254304_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001140693.1|1255147_1255729_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.9	5.5e-33
>prophage 86
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1259110	1260354	2939465		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1259110_1259311_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_000141557.1|1259667_1260354_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	1.7e-33
>prophage 87
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1269578	1291917	2939465	integrase,capsid	Staphylococcus_phage(46.67%)	23	1261473:1261487	1285298:1285312
1261473:1261487	attL	AGCCTACAACCACAT	NA	NA	NA	NA
WP_000757397.1|1269578_1270307_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.3e-18
WP_001058299.1|1270660_1270984_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001035619.1|1272450_1273008_+	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	74.3	8.6e-68
WP_000282760.1|1273085_1273886_-	staphylococcal enterotoxin type B	NA	A0A097PAT7	Streptococcus_pyogenes_phage	46.2	5.9e-54
WP_000801979.1|1275042_1276011_-	Abi family protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	5.9e-24
WP_000253083.1|1276439_1276931_-	hypothetical protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	39.9	3.0e-24
WP_000657544.1|1277108_1278167_-|capsid	phage capsid protein	capsid	A0A0K2CZ99	Paenibacillus_phage	26.6	3.6e-14
WP_000884055.1|1278153_1278360_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001081426.1|1278584_1278929_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	65.2	5.5e-41
WP_086154319.1|1279616_1281989_-	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	39.1	1.8e-135
WP_001103961.1|1282081_1282381_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	66.7	5.9e-31
WP_001058501.1|1282381_1282606_-	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	61.8	8.9e-16
WP_000773731.1|1282598_1282745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000163544.1|1282756_1282975_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000583242.1|1283126_1283864_+	helix-turn-helix transcriptional regulator	NA	A0A1W6JQE6	Staphylococcus_phage	31.2	1.2e-05
WP_025175311.1|1283878_1284985_+|integrase	site-specific integrase	integrase	A0A1B2AQ00	Phage_Wrath	43.0	6.9e-77
WP_000586155.1|1284996_1285212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085183.1|1285767_1286232_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	98.7	1.6e-80
1285298:1285312	attR	ATGTGGTTGTAGGCT	NA	NA	NA	NA
WP_001050048.1|1286253_1288626_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.8	4.3e-92
WP_001165959.1|1288659_1289400_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|1289515_1289749_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1289815_1290274_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|1290612_1291917_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 88
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1301256	1307187	2939465		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1301256_1301844_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006549.1|1302407_1303352_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.3	5.4e-54
WP_001248939.1|1303462_1304458_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369721.1|1304454_1305366_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1306251_1307187_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 89
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1311634	1314481	2939465		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662676.1|1311634_1314481_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.1	0.0e+00
>prophage 90
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1317799	1318639	2939465		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000753319.1|1317799_1318639_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 91
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1324717	1330423	2939465		Streptococcus_phage(66.67%)	5	NA	NA
WP_001557172.1|1324717_1325800_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	9.9e-44
WP_000686347.1|1326163_1327030_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192949.1|1327173_1327815_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.7	5.3e-37
WP_000258150.1|1327979_1329035_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|1329352_1330423_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 92
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1339702	1363175	2939465		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616840.1|1339702_1340464_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
WP_001245577.1|1340460_1341417_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|1341403_1342375_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|1342413_1342569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1342749_1343721_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855512.1|1343838_1345944_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.6	0.0e+00
WP_000692521.1|1345906_1346305_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068501.1|1347105_1347972_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1347991_1348492_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193749.1|1348832_1350338_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	1.5e-58
WP_031760357.1|1350415_1350517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|1350607_1351525_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_000197262.1|1352403_1352946_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663030.1|1353284_1354343_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000180991.1|1354582_1356097_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589248.1|1356089_1357067_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	7.1e-25
WP_000983677.1|1357288_1359070_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525106.1|1359081_1360965_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_000098285.1|1361234_1363175_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.3e-110
>prophage 93
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1366314	1376161	2939465		Pandoravirus(12.5%)	12	NA	NA
WP_001217796.1|1366314_1367466_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
WP_000604514.1|1367449_1368043_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|1368393_1369062_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|1369063_1369483_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1369486_1370200_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000604990.1|1370298_1370883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093562.1|1371162_1371603_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1371945_1372419_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1372393_1373080_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|1373079_1374135_+	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702778.1|1374206_1375190_-	lipoteichoic acid-specific glycosylation protein CsbB	NA	A0A192Y8W7	Salmonella_phage	43.3	1.1e-62
WP_000931238.1|1375321_1376161_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.5	9.6e-55
>prophage 94
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1387773	1389147	2939465		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000952038.1|1387773_1389147_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	33.6	2.3e-45
>prophage 95
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1394124	1400404	2939465		Bacillus_phage(33.33%)	6	NA	NA
WP_000857598.1|1394124_1395798_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	23.2	3.4e-11
WP_000737148.1|1395794_1397426_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	6.7e-12
WP_000469894.1|1397644_1398520_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|1398691_1399375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148826.1|1399377_1399836_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820897.1|1399837_1400404_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	4.7e-21
>prophage 96
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1407194	1407668	2939465		Pandoravirus(100.0%)	1	NA	NA
WP_000833486.1|1407194_1407668_-	cupin domain-containing protein	NA	A0A291AU44	Pandoravirus	39.4	1.6e-14
>prophage 97
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1412930	1413728	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1412930_1413728_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 98
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1418556	1419318	2939465		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|1418556_1419318_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 99
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1423692	1424736	2939465		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_001030772.1|1423692_1424736_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
>prophage 100
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1431259	1432057	2939465		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1431259_1432057_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 101
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1435282	1439241	2939465		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1435282_1437010_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793068.1|1437430_1438726_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|1438842_1439241_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 102
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1446175	1446919	2939465		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|1446175_1446919_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 103
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1459457	1460018	2939465	integrase	Streptococcus_phage(100.0%)	1	1453611:1453625	1463608:1463622
1453611:1453625	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|1459457_1460018_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|1459457_1460018_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
1463608:1463622	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 104
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1472846	1476200	2939465		Tupanvirus(50.0%)	3	NA	NA
WP_001200747.1|1472846_1473857_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.6	1.9e-33
WP_001792725.1|1474355_1474877_-	YwhD family protein	NA	NA	NA	NA	NA
WP_000180234.1|1474904_1476200_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 105
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1483772	1485095	2939465		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860592.1|1483772_1485095_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.8	2.6e-107
>prophage 106
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1496399	1497056	2939465		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455256.1|1496399_1497056_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	1.1e-45
>prophage 107
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1502618	1504019	2939465		Burkholderia_virus(100.0%)	1	NA	NA
WP_000347061.1|1502618_1504019_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	9.4e-55
>prophage 108
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1527056	1527719	2939465		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067261.1|1527056_1527719_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 109
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1534302	1535490	2939465		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250823.1|1534302_1535490_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.6	4.4e-45
>prophage 110
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1538518	1549472	2939465		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1538518_1540600_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1540722_1541193_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1541258_1541672_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1541769_1542024_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_001788197.1|1542160_1545757_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_000918667.1|1545920_1549472_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 111
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1553155	1557938	2939465	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1553155_1553704_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1553716_1553899_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1553954_1554098_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872882.1|1554212_1554782_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664737.1|1554862_1555387_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|1555386_1556133_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|1556140_1556545_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631969.1|1556537_1557938_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.8	1.2e-54
>prophage 112
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1563949	1566406	2939465	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897132.1|1563949_1566406_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.2	1.4e-133
>prophage 113
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1580033	1590304	2939465	tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1580033_1581521_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|1581573_1581666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613722.1|1582059_1582536_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|1582532_1582898_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167944.1|1582875_1583679_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.0	3.0e-21
WP_000057594.1|1583894_1584827_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148598.1|1585005_1585887_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167888.1|1586114_1588208_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1588464_1589004_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176709.1|1589008_1590304_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
>prophage 114
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1599560	1602025	2939465		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1599560_1600526_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252543.1|1600672_1602025_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 115
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1609450	1612548	2939465	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_001051129.1|1609450_1611424_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.2	1.5e-93
WP_000279926.1|1611708_1612548_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 116
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1616454	1617072	2939465		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272126.1|1616454_1617072_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 117
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1628313	1631697	2939465		Bacillus_phage(50.0%)	5	NA	NA
WP_001041111.1|1628313_1629084_-	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	2.2e-21
WP_001190829.1|1629058_1629538_-	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001052491.1|1629539_1629866_-	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_000390829.1|1629984_1630986_-	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_000621175.1|1631334_1631697_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
>prophage 118
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1636846	1638874	2939465		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546612.1|1636846_1638874_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.7	2.5e-24
>prophage 119
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1646065	1647586	2939465		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|1646065_1647586_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 120
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1654786	1655434	2939465		Moumouvirus(100.0%)	1	NA	NA
WP_001187630.1|1654786_1655434_+	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.0	8.0e-09
>prophage 121
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1661605	1662001	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|1661605_1662001_-	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 122
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1672405	1680155	2939465		Catovirus(25.0%)	9	NA	NA
WP_000723418.1|1672405_1673533_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
WP_000048712.1|1673556_1674186_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000120492.1|1674213_1675452_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.2	4.8e-103
WP_000654184.1|1675478_1676003_-	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000697334.1|1676109_1676529_-	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000379895.1|1676525_1677572_-	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.3	2.2e-40
WP_000248732.1|1677655_1678492_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_000460242.1|1678478_1679555_-	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000273358.1|1679555_1680155_-	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
>prophage 123
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1687958	1689569	2939465		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|1687958_1689569_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 124
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1697509	1701340	2939465		Geobacillus_virus(50.0%)	4	NA	NA
WP_001242311.1|1697509_1698811_-	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	3.6e-133
WP_001083318.1|1699089_1699752_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_000160304.1|1700065_1700776_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_000070866.1|1700896_1701340_-	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
>prophage 125
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1712520	1715340	2939465		Bacillus_phage(50.0%)	2	NA	NA
WP_000908182.1|1712520_1713303_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	3.3e-09
WP_000334463.1|1713534_1715340_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.8	5.2e-98
>prophage 126
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1721596	1729042	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001048266.1|1721596_1729042_-	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	31.5	3.9e-22
>prophage 127
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1732633	1733542	2939465		Klosneuvirus(100.0%)	1	NA	NA
WP_000167867.1|1732633_1733542_-	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 128
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1749412	1750381	2939465		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989088.1|1749412_1750381_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 129
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1760583	1762146	2939465		Vibrio_phage(100.0%)	1	NA	NA
WP_000792342.1|1760583_1762146_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.2e-18
>prophage 130
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1766109	1767522	2939465		Pandoravirus(100.0%)	1	NA	NA
WP_000169224.1|1766109_1767522_-	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	3.0e-48
>prophage 131
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1773842	1776152	2939465		Orpheovirus(50.0%)	4	NA	NA
WP_001557494.1|1773842_1774583_+	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.9	1.5e-14
WP_001791678.1|1774619_1774781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000875476.1|1774867_1775071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001015500.1|1775303_1776152_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
>prophage 132
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1779534	1787191	2939465		Clostridium_phage(33.33%)	7	NA	NA
WP_001044441.1|1779534_1780389_-	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	4.9e-06
WP_000044362.1|1780599_1781415_-	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000769705.1|1781710_1782136_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000186134.1|1782519_1783224_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_000130149.1|1783260_1784925_-	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.9	8.0e-45
WP_031901102.1|1785418_1785601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000411031.1|1786174_1787191_-	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	29.7	1.0e-18
>prophage 133
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1795975	1797642	2939465		Staphylococcus_phage(50.0%)	2	NA	NA
WP_000155386.1|1795975_1796836_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
WP_000389658.1|1796832_1797642_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.0	1.7e-19
>prophage 134
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1821325	1824493	2939465		Leptospira_phage(100.0%)	1	NA	NA
WP_000592307.1|1821325_1824493_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	1.1e-61
>prophage 135
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1836463	1837069	2939465		Pithovirus(100.0%)	1	NA	NA
WP_000913024.1|1836463_1837069_-	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.1	4.3e-12
>prophage 136
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1856049	1856853	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717381.1|1856049_1856853_+	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.3e-07
>prophage 137
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1860770	1864888	2939465		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000737705.1|1860770_1861271_+	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
WP_000417018.1|1861631_1862585_+	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	6.4e-31
WP_000684147.1|1862676_1863801_-	FAD-dependent monooxygenase	NA	A0A2K9L3K5	Tupanvirus	22.8	9.3e-13
WP_000739224.1|1864111_1864888_-	glucosaminidase domain-containing protein	NA	H9A0P7	Staphylococcus_phage	41.0	3.8e-37
>prophage 138
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1879213	1879849	2939465		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|1879213_1879849_-	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 139
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1887727	1888609	2939465		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000235289.1|1887727_1888609_-	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	3.8e-62
>prophage 140
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1894241	1894661	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000920239.1|1894241_1894661_+	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.9	2.6e-37
>prophage 141
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1902033	1902933	2939465		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524830.1|1902033_1902933_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.7	1.2e-15
>prophage 142
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1915023	1916232	2939465		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|1915023_1916232_-	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 143
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1919971	1923868	2939465		Planktothrix_phage(33.33%)	4	NA	NA
WP_001229920.1|1919971_1920637_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.6e-36
WP_000761395.1|1920636_1921692_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000249497.1|1921827_1922502_+	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_000477338.1|1922494_1923868_+	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	2.3e-13
>prophage 144
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1933713	1934748	2939465		Bacillus_virus(100.0%)	1	NA	NA
WP_000655971.1|1933713_1934748_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 145
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1956076	1957636	2939465		Escherichia_phage(100.0%)	1	NA	NA
WP_000692648.1|1956076_1957636_-	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 146
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1974285	1975017	2939465		Bacillus_virus(100.0%)	1	NA	NA
WP_000615461.1|1974285_1975017_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.1e-25
>prophage 147
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1983029	1988800	2939465		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000594519.1|1983029_1983959_+	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
WP_000916704.1|1984525_1985473_+	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.5	3.2e-139
WP_000783428.1|1985474_1986452_+	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000200956.1|1986503_1986971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000286875.1|1986981_1987674_-	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000971550.1|1987684_1988800_-	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	1.6e-20
>prophage 148
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	1992261	1998523	2939465		Bacillus_phage(66.67%)	5	NA	NA
WP_000486487.1|1992261_1993995_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
WP_001064825.1|1994019_1995783_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	2.5e-36
WP_000482652.1|1996485_1996593_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_000779360.1|1996726_1997113_-	flippase GtxA	NA	NA	NA	NA	NA
WP_001176863.1|1997380_1998523_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
>prophage 149
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2016251	2018110	2939465		Bacillus_virus(50.0%)	2	NA	NA
WP_000569120.1|2016251_2016887_-	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	9.0e-05
WP_000948974.1|2016883_2018110_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
>prophage 150
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2021504	2025933	2939465		Pandoravirus(50.0%)	4	NA	NA
WP_000700924.1|2021504_2022812_+	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.4e-12
WP_000026189.1|2022918_2024106_-	MFS transporter	NA	NA	NA	NA	NA
WP_000072149.1|2024501_2025278_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000923526.1|2025270_2025933_-	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.8	5.5e-21
>prophage 151
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2033204	2034762	2939465		Bacillus_virus(50.0%)	2	NA	NA
WP_000598772.1|2033204_2033954_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	9.0e-20
WP_000173871.1|2033946_2034762_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	8.8e-13
>prophage 152
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2042814	2043633	2939465		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824948.1|2042814_2043633_-	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	27.2	1.3e-08
>prophage 153
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2048187	2048883	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000217456.1|2048187_2048883_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.6	4.3e-08
>prophage 154
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2061632	2063441	2939465		Streptococcus_phage(100.0%)	1	NA	NA
WP_001835549.1|2061632_2063441_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.3	3.9e-93
>prophage 155
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2071242	2072109	2939465		Bacillus_phage(100.0%)	1	NA	NA
WP_000721336.1|2071242_2072109_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	1.3e-78
>prophage 156
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2092504	2093200	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000538625.1|2092504_2093200_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	3.0e-38
>prophage 157
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2102478	2103471	2939465		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161545.1|2102478_2103471_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	32.7	3.7e-37
>prophage 158
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2112760	2119144	2939465		Powai_lake_megavirus(33.33%)	5	NA	NA
WP_001228167.1|2112760_2113729_-	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	4.0e-12
WP_000240663.1|2113849_2114206_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000206031.1|2114247_2114658_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000473678.1|2115037_2117104_-	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_001062663.1|2117404_2119144_-	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	6.0e-35
>prophage 159
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2125570	2128606	2939465	protease	Streptococcus_phage(50.0%)	2	NA	NA
WP_000455988.1|2125570_2126092_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
WP_001058993.1|2126500_2128606_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpL	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
>prophage 160
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2137849	2142091	2939465		uncultured_virus(50.0%)	3	NA	NA
WP_000024139.1|2137849_2140258_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.8	3.2e-127
WP_000076661.1|2140795_2141002_+	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000161369.1|2141092_2142091_-	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	1.0e-34
>prophage 161
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2150525	2154315	2939465		Salmonella_virus(50.0%)	3	NA	NA
WP_000379821.1|2150525_2152337_-	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
WP_000996739.1|2152849_2153338_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000751263.1|2153613_2154315_-	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	5.2e-38
>prophage 162
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2184513	2194627	2939465	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000030072.1|2184513_2185851_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.0e-18
WP_001237629.1|2186108_2186525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001031409.1|2186647_2187538_+	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001130051.1|2187731_2189228_-	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001791980.1|2189523_2189853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001172341.1|2189912_2191511_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	5.3e-78
WP_001028775.1|2191704_2192148_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_000011688.1|2192427_2192640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000066521.1|2192917_2194627_-|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
>prophage 163
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2199505	2201889	2939465		Enterococcus_phage(100.0%)	2	NA	NA
WP_000173331.1|2199505_2200042_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.0	3.9e-41
WP_001071727.1|2200038_2201889_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	1.6e-235
>prophage 164
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2206883	2207381	2939465		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|2206883_2207381_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 165
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2210801	2212552	2939465		Planktothrix_phage(50.0%)	2	NA	NA
WP_000923760.1|2210801_2211557_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
WP_000143425.1|2211664_2212552_-	nisin susceptibility-associated two-component system sensor histidine kinase NsaS	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
>prophage 166
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2238235	2240095	2939465		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125628.1|2238235_2240095_+	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 167
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2266193	2266886	2939465		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185863.1|2266193_2266886_-	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	2.2e-28
>prophage 168
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2279225	2280239	2939465		Faustovirus(100.0%)	1	NA	NA
WP_000639184.1|2279225_2280239_-	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	25.9	9.6e-09
>prophage 169
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2285867	2287580	2939465		Planktothrix_phage(100.0%)	1	NA	NA
WP_000138654.1|2285867_2287580_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.4e-20
>prophage 170
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2301822	2308379	2939465		Planktothrix_phage(25.0%)	8	NA	NA
WP_000154162.1|2301822_2302581_+	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
WP_000143647.1|2302570_2304451_+	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA	NA
WP_000672035.1|2304542_2304734_+	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA	NA
WP_001059079.1|2305125_2305326_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
WP_001054128.1|2305443_2306013_-	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_000779134.1|2306272_2306668_-	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000491382.1|2306735_2307089_-	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000742837.1|2307539_2308379_-	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
>prophage 171
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2318479	2399929	2939465	tRNA,transposase,integrase	Bacillus_phage(25.0%)	62	2371591:2371608	2396642:2396659
WP_000255578.1|2318479_2320414_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
WP_000819070.1|2320450_2323120_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	36.0	5.5e-120
WP_000449218.1|2323207_2324020_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000177465.1|2324345_2325860_+	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.4	1.2e-90
WP_000884332.1|2326238_2327525_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.9	4.5e-88
WP_000190726.1|2328175_2328871_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_000628051.1|2328867_2329197_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_000186490.1|2329559_2330528_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_001800884.1|2330820_2331759_+	YybS family protein	NA	NA	NA	NA	NA
WP_001081640.1|2331773_2333741_+	cyclic-di-AMP phosphodiesterase GdpP	NA	NA	NA	NA	NA
WP_000864305.1|2333737_2334184_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_000375647.1|2334215_2335616_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
WP_000095328.1|2335893_2337177_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	1.8e-68
WP_000101976.1|2338379_2339081_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000871607.1|2339093_2340920_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_001060140.1|2340912_2342247_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001104165.1|2342247_2343036_+	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_000088649.1|2343424_2344225_+	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_000645787.1|2344451_2346770_+	LPXTG-anchored adenosine synthase AdsA	NA	NA	NA	NA	NA
WP_000704775.1|2347137_2347617_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_000400093.1|2348166_2348400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000393941.1|2354363_2355980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000640645.1|2356139_2357651_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_001621813.1|2357673_2359332_-	glutamate ligase	NA	NA	NA	NA	NA
WP_001621810.1|2359325_2359724_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001053439.1|2360572_2361202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000931963.1|2361216_2361459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000832687.1|2361857_2362709_+|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	95.7	1.4e-69
WP_000036756.1|2362808_2363738_-	carbamate kinase	NA	NA	NA	NA	NA
WP_000793596.1|2363757_2364756_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000272781.1|2364793_2365483_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_000249804.1|2367033_2368269_-	arginine deiminase	NA	NA	NA	NA	NA
WP_000711815.1|2368538_2368985_-	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_078147993.1|2369928_2370240_+	DUF3387 domain-containing protein	NA	NA	NA	NA	NA
WP_000475804.1|2370510_2370942_-	universal stress protein	NA	NA	NA	NA	NA
2371591:2371608	attL	TTATATATTATTTATTTA	NA	NA	NA	NA
WP_000916431.1|2371823_2372150_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150030570.1|2372165_2372840_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	95.1	1.2e-121
WP_000566670.1|2373371_2374628_+	DUF3578 domain-containing protein	NA	NA	NA	NA	NA
WP_001282728.1|2375042_2375282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001106057.1|2375313_2375988_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
WP_000958858.1|2377249_2377993_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_000872606.1|2378089_2378518_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_001801873.1|2378563_2380573_-	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NA	NA	NA	NA	NA
WP_000952923.1|2380669_2382427_+	beta-lactam sensor/signal transducer MecR1	NA	NA	NA	NA	NA
WP_000369214.1|2382426_2382798_+	mecA-type methicillin resistance repressor MecI	NA	NA	NA	NA	NA
WP_014532405.1|2382882_2382951_-	phenol-soluble modulin PSM-mec	NA	NA	NA	NA	NA
WP_010922808.1|2383284_2384415_+	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_000438836.1|2385895_2386960_-	DsrE/DsrF/DrsH-like family protein	NA	NA	NA	NA	NA
WP_000220507.1|2387095_2387356_+	persulfide-sensing transcriptional repressor CstR	NA	NA	NA	NA	NA
WP_000350222.1|2387355_2388000_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_001092058.1|2388338_2389001_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_001072201.1|2389534_2390266_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_000067268.1|2390391_2391174_-	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	NA	NA	NA
WP_000361059.1|2391324_2391702_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001557544.1|2391708_2393601_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000868132.1|2393597_2394683_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_000659050.1|2394801_2395119_-	RadC family protein	NA	NA	NA	NA	NA
WP_001092169.1|2395139_2395646_-	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_000700853.1|2395663_2395975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000859155.1|2396061_2396412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001186602.1|2396929_2398558_-	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	31.4	2.4e-46
2396642:2396659	attR	TTATATATTATTTATTTA	NA	NA	NA	NA
WP_000815646.1|2398579_2399929_-	recombinase family protein	NA	Q9T200	Bacillus_phage	25.1	1.4e-18
>prophage 172
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2407711	2414365	2939465		Tupanvirus(50.0%)	4	NA	NA
WP_150030571.1|2407711_2410381_-	DUF4118 domain-containing protein	NA	A0A2K9L0Z8	Tupanvirus	21.5	6.0e-10
WP_000631574.1|2410547_2410628_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_000029430.1|2410648_2412325_+	potassium-transporting ATPase subunit A	NA	NA	NA	NA	NA
WP_000852430.1|2412343_2414365_+	K(+)-transporting ATPase subunit B	NA	E4ZFI9	Streptococcus_phage	29.0	6.6e-41
>prophage 173
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2425053	2426118	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000816133.1|2425053_2426118_+	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	41.8	7.7e-09
>prophage 174
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2459074	2463284	2939465		uncultured_Caudovirales_phage(50.0%)	4	NA	NA
WP_000136633.1|2459074_2460073_-	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.8	5.2e-15
WP_000924990.1|2460069_2461065_-	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_001045111.1|2461080_2462073_-	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000570808.1|2462303_2463284_+	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
>prophage 175
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2471550	2476647	2939465		Tupanvirus(50.0%)	6	NA	NA
WP_001223713.1|2471550_2472753_+	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	3.9e-09
WP_001015549.1|2472756_2473521_+	bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI	NA	NA	NA	NA	NA
WP_000414629.1|2473716_2474343_+	MFS transporter	NA	NA	NA	NA	NA
WP_000183771.1|2474554_2475331_+	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA	NA
WP_001789407.1|2475474_2475597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001793242.1|2475666_2476647_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
>prophage 176
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2481584	2482184	2939465		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|2481584_2482184_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 177
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2490215	2490989	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|2490215_2490989_-	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 178
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2496428	2497604	2939465		Clostridium_phage(100.0%)	1	NA	NA
WP_000469833.1|2496428_2497604_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A7RTT7	Clostridium_phage	27.6	2.0e-29
>prophage 179
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2501624	2508189	2939465		Catovirus(50.0%)	6	NA	NA
WP_000037332.1|2501624_2502311_+	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
WP_000565304.1|2502313_2503078_+	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000940790.1|2503097_2504921_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.1	5.2e-29
WP_000459062.1|2504910_2505939_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_001028283.1|2505951_2507061_+	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000413171.1|2507064_2508189_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
>prophage 180
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2515024	2517509	2939465		Bacillus_phage(50.0%)	2	NA	NA
WP_000779504.1|2515024_2516287_+	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.5	4.3e-22
WP_000723436.1|2516363_2517509_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	25.9	4.6e-23
>prophage 181
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2520850	2524081	2939465		Indivirus(50.0%)	4	NA	NA
WP_001013485.1|2520850_2521810_+	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
WP_000356963.1|2522104_2522308_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000171919.1|2522486_2522999_+	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000590854.1|2523340_2524081_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.1	2.5e-38
>prophage 182
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2527617	2537901	2939465		Catovirus(50.0%)	3	NA	NA
WP_000706135.1|2527617_2528643_+	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.5	8.5e-29
WP_000826862.1|2529028_2530279_+	MFS transporter	NA	NA	NA	NA	NA
WP_000605281.1|2530725_2537901_+	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	29.7	4.5e-68
>prophage 183
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2542737	2543922	2939465		Klosneuvirus(100.0%)	1	NA	NA
WP_001084442.1|2542737_2543922_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	2.0e-34
>prophage 184
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2560728	2561409	2939465		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571407.1|2560728_2561409_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	2.9e-33
>prophage 185
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2565281	2568468	2939465		Staphylococcus_phage(33.33%)	4	NA	NA
WP_000960712.1|2565281_2566004_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.8	4.1e-22
WP_000739160.1|2565990_2566179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000794565.1|2566168_2566366_+	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	43.3	2.1e-05
WP_000067352.1|2566875_2568468_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	4.1e-22
>prophage 186
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2577017	2579077	2939465		Pontimonas_phage(50.0%)	2	NA	NA
WP_000166920.1|2577017_2577596_+	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.1	9.7e-14
WP_000818915.1|2577979_2579077_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
>prophage 187
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2589287	2594646	2939465		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000127990.1|2589287_2590844_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
WP_000837116.1|2590840_2591809_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000894660.1|2592396_2594646_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
>prophage 188
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2605753	2607259	2939465		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008400.1|2605753_2607259_-	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	6.0e-39
>prophage 189
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2616134	2617664	2939465		Vibrio_phage(100.0%)	1	NA	NA
WP_000838205.1|2616134_2617664_-	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	50.7	4.5e-10
>prophage 190
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2624878	2625922	2939465		Synechococcus_phage(100.0%)	1	NA	NA
WP_000645608.1|2624878_2625922_+	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.9	3.5e-14
>prophage 191
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2635249	2639788	2939465		Catovirus(50.0%)	3	NA	NA
WP_000975351.1|2635249_2636971_+	poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
WP_150030574.1|2637114_2637789_+	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000950281.1|2638033_2639788_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	9.0e-63
>prophage 192
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2643548	2644985	2939465		Pandoravirus(100.0%)	1	NA	NA
WP_000164003.1|2643548_2644985_+	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.7	1.1e-29
>prophage 193
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2653783	2655445	2939465		Arthrobacter_phage(50.0%)	2	NA	NA
WP_000736784.1|2653783_2654734_+	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
WP_000570070.1|2654785_2655445_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
>prophage 194
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2666050	2670490	2939465		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549295.1|2666050_2670490_+	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	25.6	6.3e-28
>prophage 195
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2685139	2685817	2939465		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911017.1|2685139_2685817_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	1.6e-31
>prophage 196
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2704054	2706789	2939465		Tupanvirus(50.0%)	3	NA	NA
WP_000449069.1|2704054_2704855_+	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.4	5.8e-41
WP_001191954.1|2704844_2705789_+	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000280799.1|2705766_2706789_+	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
>prophage 197
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2728096	2728939	2939465		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209551.1|2728096_2728939_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.2	3.8e-11
>prophage 198
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2738877	2745206	2939465		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000655692.1|2738877_2739981_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.0	3.9e-11
WP_025175307.1|2740642_2741488_+	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	29.2	1.3e-11
WP_000373073.1|2741641_2742523_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_000157348.1|2742552_2742756_+	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_001218732.1|2742767_2743865_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_001052484.1|2743950_2744142_-	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	1.1e-22
WP_001261460.1|2744385_2744682_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_000934799.1|2744702_2745206_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
>prophage 199
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2753520	2755044	2939465		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930511.1|2753520_2755044_-	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 200
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2759297	2776821	2939465	integrase	Streptococcus_phage(100.0%)	20	2759273:2759286	2777060:2777073
2759273:2759286	attL	ATAAGTAGTAAATT	NA	NA	NA	NA
WP_001291561.1|2759297_2760515_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|2760596_2760800_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|2761260_2761491_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|2761487_2761910_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|2762414_2762768_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|2762827_2762995_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_000691736.1|2763114_2765034_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_001814923.1|2765049_2765166_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224318.1|2765410_2766343_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_000769868.1|2766339_2767341_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804744.1|2767337_2769515_-	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	99.4	0.0e+00
WP_000331160.1|2769517_2771965_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|2771948_2772455_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|2772429_2772927_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|2773043_2773265_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|2773307_2774513_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|2774535_2774688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|2774690_2776076_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|2776104_2776491_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|2776506_2776821_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
2777060:2777073	attR	ATAAGTAGTAAATT	NA	NA	NA	NA
>prophage 201
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2783563	2789012	2939465	transposase	Klosneuvirus(25.0%)	5	NA	NA
WP_000264071.1|2783563_2785030_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
WP_000424963.1|2785054_2786596_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000551643.1|2786708_2787245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000041880.1|2787636_2788341_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.1	5.8e-29
WP_000159787.1|2788739_2789012_-|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	1.3e-13
>prophage 202
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2801549	2804310	2939465		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000028663.1|2801549_2803106_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.2	1.2e-287
WP_000072584.1|2803098_2804310_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.2	2.2e-44
>prophage 203
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2830255	2836494	2939465		Lactococcus_phage(33.33%)	6	NA	NA
WP_000634098.1|2830255_2831161_+	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	3.8e-49
WP_001036648.1|2831153_2832296_+	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000569281.1|2832590_2833616_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	3.7e-32
WP_000467994.1|2833619_2834279_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000825530.1|2834315_2835158_+	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_001170264.1|2835489_2836494_+	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.2	1.6e-24
>prophage 204
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2853142	2854840	2939465		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109040.1|2853142_2854840_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.3	1.9e-54
>prophage 205
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2866598	2871321	2939465		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094583.1|2866598_2868128_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_168285279.1|2868141_2869176_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2869297_2869552_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047811.1|2869551_2871321_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.6	7.0e-63
>prophage 206
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2875081	2889142	2939465	tRNA	Moraxella_phage(16.67%)	12	NA	NA
WP_000159041.1|2875081_2876107_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.6	3.4e-62
WP_000106332.1|2876421_2878032_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	28.1	1.9e-19
WP_001792272.1|2878120_2878249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602057.1|2878393_2880322_-	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.2	9.3e-53
WP_001283612.1|2880574_2881210_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_000266884.1|2881513_2882593_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581076.1|2882652_2882877_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052270.1|2883084_2884335_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000790331.1|2884517_2885468_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000141432.1|2885616_2887101_+	glycoside hydrolase family 32 protein	NA	S6ATV4	Bacillus_phage	26.5	2.3e-19
WP_001253312.1|2887097_2888057_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000688492.1|2888425_2889142_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 207
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2896311	2908655	2939465	integrase,terminase,coat	Staphylococcus_phage(88.89%)	19	2898271:2898290	2914350:2914369
WP_000917289.1|2896311_2896596_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|2896671_2898288_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
2898271:2898290	attL	ATGCCGGGAATGATGTAAAA	NA	NA	NA	NA
WP_000179353.1|2898356_2899529_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	97.9	1.7e-219
WP_000672427.1|2899542_2900265_-	helix-turn-helix transcriptional regulator	NA	Q4ZE79	Staphylococcus_phage	38.2	3.3e-35
WP_000794657.1|2900417_2900624_+	helix-turn-helix transcriptional regulator	NA	Q4ZE78	Staphylococcus_phage	71.6	6.4e-21
WP_000481968.1|2900627_2900945_+	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	95.2	5.1e-49
WP_000708434.1|2900941_2901088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058487.1|2901080_2901290_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	92.8	2.2e-29
WP_001103933.1|2901292_2901610_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	48.1	1.2e-18
WP_001002699.1|2901676_2902546_+	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	96.5	1.6e-161
WP_001838755.1|2902562_2904032_+	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	99.4	9.9e-289
WP_001039169.1|2904317_2904680_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	98.3	5.8e-65
WP_000998179.1|2904681_2904966_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	100.0	1.2e-49
WP_001019811.1|2904962_2905604_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	91.1	2.2e-107
WP_001190614.1|2906139_2906481_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	100.0	2.9e-58
WP_000214173.1|2906511_2907165_+	hypothetical protein	NA	Q4ZE82	Staphylococcus_phage	98.2	9.3e-114
WP_000771371.1|2907217_2907745_+|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	97.1	1.4e-88
WP_078065371.1|2907876_2908089_+	pathogenicity island family protein	NA	Q4ZE86	Staphylococcus_phage	94.3	5.4e-31
WP_001293073.1|2908085_2908655_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	98.4	3.5e-101
2914350:2914369	attR	ATGCCGGGAATGATGTAAAA	NA	NA	NA	NA
>prophage 208
NZ_AP020320	Staphylococcus aureus strain KUH180062	2939465	2918316	2938994	2939465	integrase	Staphylococcus_phage(97.44%)	39	2920448:2920462	2926628:2926642
WP_000791411.1|2918316_2919372_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000595392.1|2919393_2920410_+	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
2920448:2920462	attL	AACTTTTATTTATAT	NA	NA	NA	NA
WP_000857198.1|2921528_2922566_-|integrase	site-specific integrase	integrase	A0A1X9H022	Staphylococcus_phage	100.0	2.6e-179
WP_000440838.1|2922759_2923464_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	100.0	4.6e-127
WP_000705241.1|2923603_2923771_-	hypothetical protein	NA	U5U774	Staphylococcus_phage	100.0	1.7e-24
WP_000109189.1|2923840_2924026_-	hypothetical protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
WP_000345949.1|2924022_2924169_-	hypothetical protein	NA	A0A1X9H032	Staphylococcus_phage	100.0	3.3e-19
WP_001557601.1|2924242_2925097_-	restriction endonuclease	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
WP_001083975.1|2925108_2925825_-	helix-turn-helix domain-containing protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
WP_000639923.1|2925988_2926231_+	DUF739 family protein	NA	A0A1X9H035	Staphylococcus_phage	100.0	1.6e-39
WP_000435349.1|2926243_2926690_+	hypothetical protein	NA	A0A1W6JPI3	Staphylococcus_phage	100.0	1.9e-78
2926628:2926642	attR	AACTTTTATTTATAT	NA	NA	NA	NA
WP_000939495.1|2926704_2926845_+	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000772137.1|2926837_2927047_-	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_001148587.1|2927103_2927853_+	phage antirepressor KilAC domain-containing protein	NA	A0A1W6JPN2	Staphylococcus_phage	99.6	2.0e-136
WP_001148856.1|2927868_2928066_+	hypothetical protein	NA	O80075	Staphylococcus_phage	100.0	2.5e-30
WP_000762521.1|2928052_2928433_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001120201.1|2928487_2928811_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2928807_2928969_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2929063_2929366_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2929370_2929631_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|2929639_2929903_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700555.1|2929911_2931855_+	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
WP_000138478.1|2931856_2932777_+	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	99.7	8.6e-166
WP_078065370.1|2932857_2933475_+	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	99.4	1.2e-86
WP_000934759.1|2933475_2933946_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_150030577.1|2933975_2934854_+	DnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	96.9	3.3e-130
WP_000338528.1|2934877_2935096_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401979.1|2935104_2935509_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	99.3	9.3e-72
WP_000101279.1|2935521_2935893_+	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
WP_000111491.1|2935892_2936150_+	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000178987.1|2936146_2936395_+	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_001065108.1|2936409_2936655_+	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000185693.1|2936651_2937188_+	dUTP diphosphatase	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001282071.1|2937224_2937470_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	97.5	4.2e-35
WP_000195784.1|2937466_2937673_+	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_000595265.1|2937669_2937819_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001557462.1|2937818_2938019_+	DUF1514 family protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000590122.1|2938046_2938463_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988336.1|2938694_2938994_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
