assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	1	411113-411197	1	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGGTG	26	1	3	411139-411171|411139-411171|411139-411171	NZ_AP020320.1_727476-727444|NZ_AP020320.1_1305718-1305750|NZ_AP020320.1_1305777-1305809	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,WYL	NA,NA	NA|190aa|up_9|NZ_AP020320.1_401742_402312_+	TIGR00482, Probable_nicotinate-nucleotide_adenylyltransferase, nicotinate (nicotinamide) nucleotide adenylyltransferase	NA|195aa|up_8|NZ_AP020320.1_402301_402886_+	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|118aa|up_7|NZ_AP020320.1_402886_403240_+	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|239aa|up_6|NZ_AP020320.1_403242_403959_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|229aa|up_5|NZ_AP020320.1_403998_404685_+	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|154aa|up_4|NZ_AP020320.1_404776_405238_+	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2	NA|734aa|up_3|NZ_AP020320.1_405242_407444_+	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|325aa|up_2|NZ_AP020320.1_407500_408475_+	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|84aa|up_1|NZ_AP020320.1_408519_408771_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|608aa|up_0|NZ_AP020320.1_409116_410940_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|375aa|down_0|NZ_AP020320.1_411505_412630_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|326aa|down_1|NZ_AP020320.1_412730_413708_+	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA	NA|209aa|down_2|NZ_AP020320.1_413739_414366_+	PRK14140, PRK14140, heat shock protein GrpE; Provisional	NA|611aa|down_3|NZ_AP020320.1_414434_416267_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|380aa|down_4|NZ_AP020320.1_416402_417542_+	PRK14280, PRK14280, molecular chaperone DnaJ	NA|313aa|down_5|NZ_AP020320.1_417545_418484_+	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|251aa|down_6|NZ_AP020320.1_418485_419238_+	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]	NA|449aa|down_7|NZ_AP020320.1_419244_420591_+	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|59aa|down_8|NZ_AP020320.1_420883_421060_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|228aa|down_9|NZ_AP020320.1_421303_421987_+	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	2	1248752-1248833	2	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGG	24	1	1	1248776-1248809	NZ_AP020320.1_727477-727444	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,WYL	NA,NA|79aa|down_9|NZ_AP020320.1_1255955_1256192_+	NA|417aa|up_9|NZ_AP020320.1_1239178_1240429_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|436aa|up_8|NZ_AP020320.1_1240534_1241842_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|254aa|up_7|NZ_AP020320.1_1241939_1242701_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|284aa|up_6|NZ_AP020320.1_1243028_1243880_+	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|65aa|up_5|NZ_AP020320.1_1244113_1244308_-	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|274aa|up_4|NZ_AP020320.1_1244661_1245483_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|232aa|up_3|NZ_AP020320.1_1245501_1246197_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|342aa|up_2|NZ_AP020320.1_1246189_1247215_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|99aa|up_1|NZ_AP020320.1_1247464_1247761_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|129aa|up_0|NZ_AP020320.1_1247753_1248140_-	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|293aa|down_0|NZ_AP020320.1_1248936_1249815_-	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|127aa|down_1|NZ_AP020320.1_1249993_1250374_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|119aa|down_2|NZ_AP020320.1_1250531_1250888_-	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|107aa|down_3|NZ_AP020320.1_1251031_1251352_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|180aa|down_4|NZ_AP020320.1_1251502_1252042_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|239aa|down_5|NZ_AP020320.1_1252124_1252841_-	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|141aa|down_6|NZ_AP020320.1_1252988_1253411_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|165aa|down_7|NZ_AP020320.1_1253809_1254304_+	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|194aa|down_8|NZ_AP020320.1_1255147_1255729_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|79aa|down_9|NZ_AP020320.1_1255955_1256192_+	NA
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	3	1311230-1311308	3	CRISPRCasFinder	no	cas3	DEDDh,csa3,cas3,DinG,RT,WYL	Unclear	AGAATTTCGAAAAGAAATTCTACA	24	1	3	1311254-1311284|1311254-1311284|1311254-1311284	NZ_AP020320.1_2645156-2645186|NZ_AP020320.1_376685-376715|NZ_AP020320.1_2645101-2645131	NA	1	1	Unclear	DEDDh,csa3,cas3,DinG,RT,WYL	NA,NA|36aa|down_5|NZ_AP020320.1_1318786_1318894_-,NA|35aa|down_7|NZ_AP020320.1_1320326_1320431_-	NA|301aa|up_9|NZ_AP020320.1_1300111_1301014_+	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|196aa|up_8|NZ_AP020320.1_1301256_1301844_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|315aa|up_7|NZ_AP020320.1_1302407_1303352_-	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|332aa|up_6|NZ_AP020320.1_1303462_1304458_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|304aa|up_5|NZ_AP020320.1_1304454_1305366_-	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|312aa|up_4|NZ_AP020320.1_1306251_1307187_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|480aa|up_3|NZ_AP020320.1_1307253_1308693_-	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|162aa|up_2|NZ_AP020320.1_1308700_1309186_-	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|280aa|up_1|NZ_AP020320.1_1309193_1310033_-	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|311aa|up_0|NZ_AP020320.1_1310038_1310971_-	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|949aa|down_0|NZ_AP020320.1_1311634_1314481_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|662aa|down_1|NZ_AP020320.1_1314488_1316474_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|79aa|down_2|NZ_AP020320.1_1316742_1316979_-	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|217aa|down_3|NZ_AP020320.1_1316975_1317626_-	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|280aa|down_4|NZ_AP020320.1_1317799_1318639_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|36aa|down_5|NZ_AP020320.1_1318786_1318894_-	NA	NA|370aa|down_6|NZ_AP020320.1_1319047_1320158_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|35aa|down_7|NZ_AP020320.1_1320326_1320431_-	NA	NA|844aa|down_8|NZ_AP020320.1_1320472_1323004_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|191aa|down_9|NZ_AP020320.1_1323417_1323990_-	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	4	1709580-1709660	4	CRISPRCasFinder	no	csa3	DEDDh,csa3,cas3,DinG,RT,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,WYL	NA|77aa|up_5|NZ_AP020320.1_1704454_1704685_-,NA|364aa|up_0|NZ_AP020320.1_1708471_1709563_+,NA|35aa|down_0|NZ_AP020320.1_1709995_1710100_-,NA|53aa|down_2|NZ_AP020320.1_1710779_1710938_+	NA|237aa|up_9|NZ_AP020320.1_1700065_1700776_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_AP020320.1_1700896_1701340_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_AP020320.1_1701539_1701953_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_AP020320.1_1702409_1703783_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_AP020320.1_1704454_1704685_-	NA	NA|313aa|up_4|NZ_AP020320.1_1704715_1705654_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_AP020320.1_1706089_1706755_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_AP020320.1_1706906_1707227_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|326aa|up_1|NZ_AP020320.1_1707228_1708206_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_AP020320.1_1708471_1709563_+	NA	NA|35aa|down_0|NZ_AP020320.1_1709995_1710100_-	NA	NA|57aa|down_1|NZ_AP020320.1_1710616_1710787_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|53aa|down_2|NZ_AP020320.1_1710779_1710938_+	NA	NA|286aa|down_3|NZ_AP020320.1_1711595_1712453_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_4|NZ_AP020320.1_1712520_1713303_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_5|NZ_AP020320.1_1713534_1715340_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_6|NZ_AP020320.1_1716020_1717559_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_7|NZ_AP020320.1_1717593_1719726_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_8|NZ_AP020320.1_1719737_1720172_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_9|NZ_AP020320.1_1720171_1721278_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	5	1721901-1721986	5	CRISPRCasFinder	no	csa3	DEDDh,csa3,cas3,DinG,RT,WYL	Type I-A	CCAACTGATTTTTGCGTATCATTAGT	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,WYL	NA|35aa|up_9|NZ_AP020320.1_1709995_1710100_-,NA|53aa|up_7|NZ_AP020320.1_1710779_1710938_+,NA	NA|35aa|up_9|NZ_AP020320.1_1709995_1710100_-	NA	NA|57aa|up_8|NZ_AP020320.1_1710616_1710787_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|53aa|up_7|NZ_AP020320.1_1710779_1710938_+	NA	NA|286aa|up_6|NZ_AP020320.1_1711595_1712453_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|up_5|NZ_AP020320.1_1712520_1713303_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|up_4|NZ_AP020320.1_1713534_1715340_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|up_3|NZ_AP020320.1_1716020_1717559_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|up_2|NZ_AP020320.1_1717593_1719726_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|up_1|NZ_AP020320.1_1719737_1720172_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|up_0|NZ_AP020320.1_1720171_1721278_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|452aa|down_0|NZ_AP020320.1_1729319_1730675_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|311aa|down_1|NZ_AP020320.1_1730701_1731634_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|270aa|down_2|NZ_AP020320.1_1731635_1732445_-	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|303aa|down_3|NZ_AP020320.1_1732633_1733542_-	cd09989, Arginase, Arginase family	NA|355aa|down_4|NZ_AP020320.1_1739783_1740848_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|481aa|down_5|NZ_AP020320.1_1740995_1742438_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|158aa|down_6|NZ_AP020320.1_1742760_1743234_-	pfam17080, SepA, Multidrug Resistance efflux pump	NA|448aa|down_7|NZ_AP020320.1_1743332_1744676_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|228aa|down_8|NZ_AP020320.1_1744852_1745536_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|396aa|down_9|NZ_AP020320.1_1745554_1746742_-	cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	6	1829882-1829962	6	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,WYL	Orphan	TCTATGTTGGGGCCCCGCCAACTTG	25	1	16	1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937|1829907-1829937	NZ_AP020320.1_1298397-1298367|NZ_AP020320.1_1298453-1298423|NZ_AP020320.1_1298509-1298479|NZ_AP020320.1_1298565-1298535|NZ_AP020320.1_396503-396533|NZ_AP020320.1_727488-727518|NZ_AP020320.1_934385-934415|NZ_AP020320.1_1477634-1477664|NZ_AP020320.1_1996110-1996140|NZ_AP020320.1_2423473-2423503|NZ_AP020320.1_79215-79185|NZ_AP020320.1_639086-639056|NZ_AP020320.1_1081222-1081192|NZ_AP020320.1_1248497-1248467|NZ_AP020320.1_1298341-1298311|NZ_AP020320.1_2720497-2720467	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,WYL	NA|55aa|up_9|NZ_AP020320.1_1820415_1820580_+,NA|106aa|up_8|NZ_AP020320.1_1820824_1821142_+,NA|84aa|up_5|NZ_AP020320.1_1826263_1826515_+,NA|62aa|up_0|NZ_AP020320.1_1829654_1829840_+,NA	NA|55aa|up_9|NZ_AP020320.1_1820415_1820580_+	NA	NA|106aa|up_8|NZ_AP020320.1_1820824_1821142_+	NA	NA|1056aa|up_7|NZ_AP020320.1_1821325_1824493_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NZ_AP020320.1_1824609_1825875_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NZ_AP020320.1_1826263_1826515_+	NA	NA|255aa|up_4|NZ_AP020320.1_1826506_1827271_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NZ_AP020320.1_1827432_1827873_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_AP020320.1_1827865_1829077_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_AP020320.1_1829178_1829529_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|62aa|up_0|NZ_AP020320.1_1829654_1829840_+	NA	NA|341aa|down_0|NZ_AP020320.1_1830105_1831128_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_AP020320.1_1831147_1831747_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_AP020320.1_1831753_1831987_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_AP020320.1_1831992_1832439_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_AP020320.1_1832452_1832938_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_AP020320.1_1832934_1834194_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_AP020320.1_1834256_1834751_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_AP020320.1_1834752_1835259_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_AP020320.1_1835289_1836294_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_AP020320.1_1836463_1837069_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	7	2521959-2522043	7	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGGTG	26	1	4	2521985-2522017|2521985-2522017|2521985-2522017|2521985-2522017	NZ_AP020320.1_727476-727444|NZ_AP020320.1_639098-639130|NZ_AP020320.1_1305718-1305750|NZ_AP020320.1_1305777-1305809	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,WYL	NA|402aa|up_9|NZ_AP020320.1_2511104_2512310_+,NA|68aa|down_0|NZ_AP020320.1_2522104_2522308_-	NA|402aa|up_9|NZ_AP020320.1_2511104_2512310_+	NA	NA|402aa|up_8|NZ_AP020320.1_2512310_2513516_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|186aa|up_7|NZ_AP020320.1_2513526_2514084_+	COG2148, WcaJ, Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane]	NA|296aa|up_6|NZ_AP020320.1_2514083_2514971_+	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs	NA|421aa|up_5|NZ_AP020320.1_2515024_2516287_+	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|382aa|up_4|NZ_AP020320.1_2516363_2517509_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|109aa|up_3|NZ_AP020320.1_2517573_2517900_-	PRK13313, PRK13313, staphylobilin-forming heme oxygenase IsdI	NA|128aa|up_2|NZ_AP020320.1_2517906_2518290_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|496aa|up_1|NZ_AP020320.1_2518716_2520204_+	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like	NA|320aa|up_0|NZ_AP020320.1_2520850_2521810_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|68aa|down_0|NZ_AP020320.1_2522104_2522308_-	NA	NA|171aa|down_1|NZ_AP020320.1_2522486_2522999_+	pfam14026, DUF4242, Protein of unknown function (DUF4242)	NA|247aa|down_2|NZ_AP020320.1_2523340_2524081_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|324aa|down_3|NZ_AP020320.1_2524094_2525066_+	cd13553, PBP2_NrtA_CpmA_like, Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily	NA|254aa|down_4|NZ_AP020320.1_2525062_2525824_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|344aa|down_5|NZ_AP020320.1_2525836_2526868_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|120aa|down_6|NZ_AP020320.1_2527084_2527444_+	COG5609, COG5609, Uncharacterized conserved protein [Function unknown]	NA|342aa|down_7|NZ_AP020320.1_2527617_2528643_+	PRK07574, PRK07574, NAD-dependent formate dehydrogenase	NA|417aa|down_8|NZ_AP020320.1_2529028_2530279_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|2392aa|down_9|NZ_AP020320.1_2530725_2537901_+	PRK12467, PRK12467, peptide synthase; Provisional
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	8	2778763-2778864	8	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,WYL	NA|74aa|up_6|NZ_AP020320.1_2773043_2773265_-,NA|51aa|up_4|NZ_AP020320.1_2774535_2774688_-,NA|221aa|down_1|NZ_AP020320.1_2779954_2780617_-,NA|179aa|down_7|NZ_AP020320.1_2786708_2787245_-	NA|816aa|up_9|NZ_AP020320.1_2769517_2771965_-	pfam12846, AAA_10, AAA-like domain	NA|169aa|up_8|NZ_AP020320.1_2771948_2772455_-	pfam12648, TcpE, TcpE family	NA|166aa|up_7|NZ_AP020320.1_2772429_2772927_-	pfam07275, ArdA, Antirestriction protein (ArdA)	NA|74aa|up_6|NZ_AP020320.1_2773043_2773265_-	NA	NA|402aa|up_5|NZ_AP020320.1_2773307_2774513_-	pfam02486, Rep_trans, Replication initiation factor	NA|51aa|up_4|NZ_AP020320.1_2774535_2774688_-	NA	NA|462aa|up_3|NZ_AP020320.1_2774690_2776076_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|129aa|up_2|NZ_AP020320.1_2776104_2776491_-	pfam06125, DUF961, Bacterial protein of unknown function (DUF961)	NA|105aa|up_1|NZ_AP020320.1_2776506_2776821_-	pfam06125, DUF961, Bacterial protein of unknown function (DUF961)	NA|440aa|up_0|NZ_AP020320.1_2777229_2778549_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|319aa|down_0|NZ_AP020320.1_2778880_2779837_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|221aa|down_1|NZ_AP020320.1_2779954_2780617_-	NA	NA|136aa|down_2|NZ_AP020320.1_2780759_2781167_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_AP020320.1_2781679_2782258_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_AP020320.1_2782257_2783526_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_AP020320.1_2783563_2785030_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_AP020320.1_2785054_2786596_+	PRK00074, guaA, GMP synthase; Reviewed	NA|179aa|down_7|NZ_AP020320.1_2786708_2787245_-	NA	NA|235aa|down_8|NZ_AP020320.1_2787636_2788341_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|91aa|down_9|NZ_AP020320.1_2788739_2789012_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_008620055.1_ASM862005v1	NZ_AP020320	Staphylococcus aureus strain KUH180062	9	2916356-2916437	9	CRISPRCasFinder	no		DEDDh,csa3,cas3,DinG,RT,WYL	Orphan	ACAATGCAAGTTGGGGTGGGGGCC	24	1	5	2916380-2916413|2916380-2916413|2916380-2916413|2916380-2916413|2916380-2916413	NZ_AP020320.1_940016-939983|NZ_AP020320.1_1311276-1311309|NZ_AP020320.1_284462-284429|NZ_AP020320.1_2272779-2272746|NZ_AP020320.1_723070-723103	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,RT,WYL	NA|71aa|up_8|NZ_AP020320.1_2907876_2908089_+,NA|191aa|up_6|NZ_AP020320.1_2908869_2909442_+,NA|99aa|up_5|NZ_AP020320.1_2909462_2909759_+,NA|253aa|up_3|NZ_AP020320.1_2910504_2911263_+,NA|56aa|down_5|NZ_AP020320.1_2923603_2923771_-,NA|49aa|down_7|NZ_AP020320.1_2924022_2924169_-	NA|176aa|up_9|NZ_AP020320.1_2907217_2907745_+	COG5577, COG5577, Spore coat protein [Cell envelope biogenesis, outer membrane]	NA|71aa|up_8|NZ_AP020320.1_2907876_2908089_+	NA	NA|190aa|up_7|NZ_AP020320.1_2908085_2908655_+	COG3728, XtmA, Phage terminase, small subunit [DNA replication, recombination, and repair]	NA|191aa|up_6|NZ_AP020320.1_2908869_2909442_+	NA	NA|99aa|up_5|NZ_AP020320.1_2909462_2909759_+	NA	NA|147aa|up_4|NZ_AP020320.1_2909758_2910199_+	COG1952, SecB, Preprotein translocase subunit SecB [Intracellular trafficking and secretion]	NA|253aa|up_3|NZ_AP020320.1_2910504_2911263_+	NA	NA|305aa|up_2|NZ_AP020320.1_2912188_2913103_+	cd01138, FeuA, Periplasmic binding protein FeuA	NA|283aa|up_1|NZ_AP020320.1_2913160_2914009_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|436aa|up_0|NZ_AP020320.1_2914906_2916214_-	TIGR00933, Trk_system_potassium_uptake_protein_trkH	NA|408aa|down_0|NZ_AP020320.1_2916657_2917881_-	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|352aa|down_1|NZ_AP020320.1_2918316_2919372_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|339aa|down_2|NZ_AP020320.1_2919393_2920410_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|346aa|down_3|NZ_AP020320.1_2921528_2922566_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|235aa|down_4|NZ_AP020320.1_2922759_2923464_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|56aa|down_5|NZ_AP020320.1_2923603_2923771_-	NA	NA|62aa|down_6|NZ_AP020320.1_2923840_2924026_-	pfam00815, Histidinol_dh, Histidinol dehydrogenase	NA|49aa|down_7|NZ_AP020320.1_2924022_2924169_-	NA	NA|285aa|down_8|NZ_AP020320.1_2924242_2925097_-	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p	NA|239aa|down_9|NZ_AP020320.1_2925108_2925825_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]
