bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_AP020320	Staphylococcus aureus strain KUH180062	1.1|411139|33|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.970	33	1	0	1	33	727476	727444	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	1.12e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	727444-727476	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	1.1|411139|33|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.970	33	1	0	1	33	1305718	1305750	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	1.12e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	1305718-1305750	TGGGCCCCAACACAGAGAAATTGGATTTCCAAT	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	1.1|411139|33|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.970	33	1	0	1	33	1305777	1305809	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	1.12e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	1305777-1305809	TGGGCCCCAACACAGAGAAATTGGATTTCCAAT	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	2.1|1248776|34|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	97.059	34	1	0	1	34	727477	727444	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	4.27e-09	52.3	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCTCAAT	727444-727477	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	3.1|1311254|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	100.000	31	0	0	1	31	2645156	2645186	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	8.01e-09	50.7	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	2645156-2645186	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	0
NZ_AP020320	Staphylococcus aureus strain KUH180062	3.1|1311254|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.774	31	1	0	1	31	376685	376715	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	7.21e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	376685-376715	GGCAATGGAAGTTGGCGGGGCCCCAACACAG	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	3.1|1311254|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.774	31	1	0	1	31	2645101	2645131	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	7.21e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	2645101-2645131	GGTAATGCAAGTTGGCGGGGCCCCAACACAG	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.774	31	1	0	1	31	1298397	1298367	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	7.21e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1298367-1298397	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.774	31	1	0	1	31	1298453	1298423	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	7.21e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1298423-1298453	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.774	31	1	0	1	31	1298509	1298479	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	7.21e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1298479-1298509	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	96.774	31	1	0	1	31	1298565	1298535	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	7.21e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1298535-1298565	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	396503	396533	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	396503-396533	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	727488	727518	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	727488-727518	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	934385	934415	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	934385-934415	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	1477634	1477664	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1477634-1477664	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	1996110	1996140	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1996110-1996140	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	2423473	2423503	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2423473-2423503	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	79215	79185	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	79185-79215	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	639086	639056	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	639056-639086	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	1081222	1081192	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1081192-1081222	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	1248497	1248467	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1248467-1248497	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	1298341	1298311	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1298311-1298341	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	6.1|1829907|31|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.548	31	2	0	1	31	2720497	2720467	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	6.49e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2720467-2720497	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	7.1|2521985|33|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	100.000	33	0	0	1	33	727476	727444	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	1.25e-09	53.9	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	727444-727476	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	0
NZ_AP020320	Staphylococcus aureus strain KUH180062	7.1|2521985|33|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.939	33	2	0	1	33	639098	639130	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	1.01e-07	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	639098-639130	TGGACCCCAACAAAGAGAAATTGTATTCCCAAT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	7.1|2521985|33|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.939	33	2	0	1	33	1305718	1305750	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	1.01e-07	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1305718-1305750	TGGGCCCCAACACAGAGAAATTGGATTTCCAAT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	7.1|2521985|33|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	93.939	33	2	0	1	33	1305777	1305809	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	1.01e-07	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1305777-1305809	TGGGCCCCAACACAGAGAAATTGGATTTCCAAT	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	9.1|2916380|34|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	100.000	34	0	0	1	34	940016	939983	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	4.75e-10	55.5	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	939983-940016	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	0
NZ_AP020320	Staphylococcus aureus strain KUH180062	9.1|2916380|34|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	100.000	34	0	0	1	34	1311276	1311309	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	4.75e-10	55.5	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	1311276-1311309	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	0
NZ_AP020320	Staphylococcus aureus strain KUH180062	9.1|2916380|34|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	97.059	34	1	0	1	34	284462	284429	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	4.27e-09	52.3	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	284429-284462	TTGTAGAATTTCTTTTCGAAATTCTTTGTGTTGG	1
NZ_AP020320	Staphylococcus aureus strain KUH180062	9.1|2916380|34|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	94.118	34	2	0	1	34	2272779	2272746	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	3.85e-08	49.1	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	2272746-2272779	TTGTAGAATTTCTTTTCGAAATTCTTTTTGTTGG	2
NZ_AP020320	Staphylococcus aureus strain KUH180062	9.1|2916380|34|NZ_AP020320|CRISPRCasFinder	NZ_AP020320.1	Staphylococcus aureus strain KUH180062	94.118	34	2	0	1	34	723070	723103	411113-411197|1248752-1248833|1311230-1311308|1709580-1709660|1721901-1721986|1829882-1829962|2521959-2522043|2778763-2778864|2916356-2916437	3.85e-08	49.1	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	723070-723103	CCAACACAGAGAATTTCGATAAGAAATTCCACAA	2
