assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008693505.1_ASM869350v1	NZ_CP044091	Streptococcus agalactiae strain FDAARGOS_669 chromosome, complete genome	1	872611-873120	1	CRT	no		DinG,cas3,csa3,DEDDh,csm6,csn2,cas2,cas1,cas9	Orphan	AGANGNTAANCCAGANGC	18	2	2	872953-872970|873037-873054	NZ_CP044091.1_872302-872319|NZ_CP044091.1_873109-873126	NA	10	10	Orphan	DinG,cas3,csa3,DEDDh,csm6,csn2,cas2,cas1,cas9	NA,NA|203aa|down_6|NZ_CP044091.1_881875_882484_-	NA|246aa|up_9|NZ_CP044091.1_860410_861148_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|260aa|up_8|NZ_CP044091.1_861305_862085_+	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases	NA|401aa|up_7|NZ_CP044091.1_862105_863308_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|224aa|up_6|NZ_CP044091.1_863337_864009_+	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|404aa|up_5|NZ_CP044091.1_864075_865287_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|547aa|up_4|NZ_CP044091.1_865456_867097_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|295aa|up_3|NZ_CP044091.1_867121_868006_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|774aa|up_2|NZ_CP044091.1_868049_870371_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|51aa|up_1|NZ_CP044091.1_870419_870572_+	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|58aa|up_0|NZ_CP044091.1_870607_870781_+	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion]	NA|180aa|down_0|NZ_CP044091.1_873518_874058_+	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|402aa|down_1|NZ_CP044091.1_874104_875310_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|399aa|down_2|NZ_CP044091.1_875374_876571_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|282aa|down_3|NZ_CP044091.1_876775_877621_+	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli	NA|416aa|down_4|NZ_CP044091.1_877663_878911_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|834aa|down_5|NZ_CP044091.1_879287_881789_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|203aa|down_6|NZ_CP044091.1_881875_882484_-	NA	NA|463aa|down_7|NZ_CP044091.1_882576_883965_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|229aa|down_8|NZ_CP044091.1_883961_884648_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|1571aa|down_9|NZ_CP044091.1_884880_889593_-	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases
GCF_008693505.1_ASM869350v1	NZ_CP044091	Streptococcus agalactiae strain FDAARGOS_669 chromosome, complete genome	2	1932866-1933693	2,1,1	CRT,PILER-CR,CRISPRCasFinder	no	csn2,cas2,cas1,cas9	DinG,cas3,csa3,DEDDh,csm6,csn2,cas2,cas1,cas9	Type II-A,Type II-C,Type II-B	GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A:II-A:II-A	12,11,11	12	TypeII-A,TypeII-C,TypeII-B	DinG,cas3,csa3,DEDDh,csm6,csn2,cas2,cas1,cas9	NA,NA	NA|204aa|up_9|NZ_CP044091.1_1919252_1919864_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|194aa|up_8|NZ_CP044091.1_1920630_1921212_+	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|368aa|up_7|NZ_CP044091.1_1921332_1922436_-	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|931aa|up_6|NZ_CP044091.1_1922435_1925228_-	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|145aa|up_5|NZ_CP044091.1_1925379_1925814_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|155aa|up_4|NZ_CP044091.1_1925813_1926278_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|220aa|up_3|NZ_CP044091.1_1926286_1926946_-	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|878aa|up_2|NZ_CP044091.1_1927045_1929679_-	NF033189, internalin_A, class 1 internalin InlA	NA|611aa|up_1|NZ_CP044091.1_1929924_1931757_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|139aa|up_0|NZ_CP044091.1_1931892_1932309_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	csn2|222aa|down_0|NZ_CP044091.1_1933793_1934459_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|NZ_CP044091.1_1934445_1934787_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_2|NZ_CP044091.1_1934783_1935653_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1378aa|down_3|NZ_CP044091.1_1935654_1939788_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|219aa|down_4|NZ_CP044091.1_1940176_1940833_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|257aa|down_5|NZ_CP044091.1_1940822_1941593_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|246aa|down_6|NZ_CP044091.1_1941593_1942331_-	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|377aa|down_7|NZ_CP044091.1_1942334_1943465_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|127aa|down_8|NZ_CP044091.1_1943556_1943937_-	TIGR02328, TIGR02328, conserved hypothetical protein	NA|124aa|down_9|NZ_CP044091.1_1943961_1944333_-	pfam08349, DUF1722, Protein of unknown function (DUF1722)
