bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	3.1|481071|32|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.875	32	1	0	1	32	1123123	1123154	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	2.79e-08	49.1	1.0	CTATGTTGGGTCCCACCCCAACTTGCATTGTT	1123123-1123154	CTATGTTGGGGCCCACCCCAACTTGCATTGTT	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.667	30	1	0	1	30	981922	981893	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	2.09e-07	46.0	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	981893-981922	CGGGGCCCCAACATAGAAGCTGGCGGAAAG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.667	30	1	0	1	30	2781397	2781368	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	2.09e-07	46.0	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	2781368-2781397	CGGGGCCCCAACATAGAAGCTGACAGAAAG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.667	30	1	0	1	30	1118917	1118946	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	2.09e-07	46.0	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	1118917-1118946	CTTTCCGCCAGCTTCTATGTTGGGGCCCCG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.667	30	1	0	1	30	1671615	1671644	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	2.09e-07	46.0	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	1671615-1671644	CTTTCCGCCAGCTTCTATGTTGGGGCCCCG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.333	30	2	0	1	30	236932	236903	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.88e-06	42.8	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	236903-236932	CGGGGCCCCAACATAGAAGCTGTCGGAAAG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.333	30	2	0	1	30	392819	392790	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.88e-06	42.8	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	392790-392819	CGGGGCCCCAACATAGAAGCTGACAAAAAG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.333	30	2	0	1	30	1461598	1461569	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.88e-06	42.8	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	1461569-1461598	CGGGGCCCCAACACAGAAGCTGGCGGAAAG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.333	30	2	0	1	30	421639	421668	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.88e-06	42.8	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	421639-421668	CTTTCCGCCAGCTACTATGTTGGGGCCCCG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.333	30	2	0	1	30	586956	586985	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.88e-06	42.8	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	586956-586985	CTTTTCGCCAGCTTCTATGTTGGGGCCCCG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.333	30	2	0	1	30	1507502	1507531	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.88e-06	42.8	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	1507502-1507531	CTTTCCGCCAGCTTCTGTGTTGGGGCCCCG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.333	30	2	0	1	30	1507558	1507587	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.88e-06	42.8	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	1507558-1507587	CTTTCCGCCAGCTTCTGTGTTGGGGCCCCG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	6.1|1119031|30|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.333	30	2	0	1	30	2747088	2747117	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.88e-06	42.8	1.0	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG	2747088-2747117	CTTTCCGCCAGCTTCTGTGTTGGGGCCCCG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	7.1|1470606|32|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	100.000	32	0	0	1	32	2747190	2747159	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	3.10e-09	52.3	1.0	GGCAATGCGAGTTGGGGTGTGGGCCCCAACAC	2747159-2747190	GTGTTGGGGCCCACACCCCAACTCGCATTGCC	0
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	7.1|1470606|32|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.875	32	1	0	1	32	981760	981791	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	2.79e-08	49.1	1.0	GGCAATGCGAGTTGGGGTGTGGGCCCCAACAC	981760-981791	GGCAATGCAAGTTGGGGTGTGGGCCCCAACAC	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	7.1|1470606|32|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.875	32	1	0	1	32	981818	981849	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	2.79e-08	49.1	1.0	GGCAATGCGAGTTGGGGTGTGGGCCCCAACAC	981818-981849	GGCAATGCAAGTTGGGGTGTGGGCCCCAACAC	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	7.1|1470606|32|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.750	32	2	0	1	32	2283816	2283847	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	2.51e-07	46.0	1.0	GGCAATGCGAGTTGGGGTGTGGGCCCCAACAC	2283816-2283847	GGCAATGCGAGTTGGGGTGAGGGCCCTAACAC	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	8.1|1516991|31|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	93.548	31	2	0	1	31	1475984	1475954	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	6.27e-07	44.4	1.0	CCTGTAGAAATTGGCGTTCCAATTTCTCTGT	1475954-1475984	ACAAAGAAATTGGAACACCAATTTCTACAGG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	100.000	26	0	0	1	26	981893	981918	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.51e-06	42.8	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	981893-981918	CGGGGCCCCAACATAGAAGCTGGCGG	0
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	100.000	26	0	0	1	26	1118946	1118921	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.51e-06	42.8	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1118921-1118946	CCGCCAGCTTCTATGTTGGGGCCCCG	0
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	100.000	26	0	0	1	26	1671644	1671619	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.51e-06	42.8	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1671619-1671644	CCGCCAGCTTCTATGTTGGGGCCCCG	0
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.154	26	1	0	1	26	61642	61667	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.36e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	61642-61667	CGGGGCCCCAACACAGAAGCTGGCGG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.154	26	1	0	1	26	236903	236928	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.36e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	236903-236928	CGGGGCCCCAACATAGAAGCTGTCGG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.154	26	1	0	1	26	1461569	1461594	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.36e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1461569-1461594	CGGGGCCCCAACACAGAAGCTGGCGG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.154	26	1	0	1	26	421668	421643	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.36e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	421643-421668	CCGCCAGCTACTATGTTGGGGCCCCG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.154	26	1	0	1	26	1507531	1507506	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.36e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1507506-1507531	CCGCCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.154	26	1	0	1	26	1507587	1507562	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.36e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1507562-1507587	CCGCCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.154	26	1	0	1	26	2747117	2747092	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.36e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	2747092-2747117	CCGCCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	92.308	26	2	0	1	26	140674	140649	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.22e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	140649-140674	CCGCCAGCTTTTGTGTTGGGGCCCCG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	9.1|2283890|26|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	92.308	26	2	0	1	26	141012	140987	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	1.22e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	140987-141012	CCGCCAGCTTCTGTCTTGGGGCCCCG	2
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	13.1|2781424|25|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.000	25	1	0	1	25	392790	392814	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	4.07e-05	38.0	1.0	CGGGGCCCCAACACAGAAGCTGACA	392790-392814	CGGGGCCCCAACATAGAAGCTGACA	1
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	13.1|2781424|25|NZ_CP044106|CRISPRCasFinder	NZ_CP044106.1	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	96.000	25	1	0	1	25	2781368	2781392	226797-226882|286516-286597|481047-481126|835987-836066|1044493-1044585|1119005-1119086|1470579-1470664|1516964-1517048|2283860-2283945|2530559-2530692|2534232-2534364|2627061-2627153|2781394-2781478	4.07e-05	38.0	1.0	CGGGGCCCCAACACAGAAGCTGACA	2781368-2781392	CGGGGCCCCAACATAGAAGCTGACA	1
