The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044074	Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome	4949413	1162556	1201980	4949413	integrase,protease,plate,tRNA,tail	uncultured_Caudovirales_phage(58.82%)	49	1152457:1152474	1185206:1185223
1152457:1152474	attL	GCGCCTGGCCGCCCTGGG	NA	NA	NA	NA
WP_007162298.1|1162556_1162913_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	39.5	2.3e-10
WP_007162299.1|1162961_1165232_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	43.0	1.8e-164
WP_002553999.1|1165303_1165522_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_150338531.1|1165616_1166324_-	arginyltransferase	NA	NA	NA	NA	NA
WP_150338532.1|1166359_1167049_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_058791300.1|1167305_1169789_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	51.7	1.5e-87
WP_007162303.1|1169806_1170430_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_027597796.1|1170439_1171768_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.2	3.7e-77
WP_027597797.1|1171815_1173093_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.8	4.3e-99
WP_007162306.1|1173092_1174487_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_150338533.1|1174490_1175492_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_150338534.1|1175557_1176541_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	65.4	2.8e-122
WP_007162309.1|1176537_1176849_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	63.6	8.8e-30
WP_144946591.1|1176851_1177151_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_150338535.1|1177147_1177504_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	50.0	5.5e-20
WP_007162312.1|1177505_1177901_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	63.8	4.0e-43
WP_007162313.1|1177950_1178619_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	73.5	9.6e-82
WP_150338536.1|1178954_1180004_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	57.9	1.1e-105
WP_150338537.1|1180005_1180248_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_150338538.1|1180976_1181297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150338539.1|1181293_1181734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150338540.1|1182400_1182817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150338541.1|1182863_1183235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150338542.1|1183359_1183980_-	hypothetical protein	NA	A0A2H4JC30	uncultured_Caudovirales_phage	85.0	1.8e-106
WP_150338543.1|1184001_1184241_-	hypothetical protein	NA	A0A2H4J8F2	uncultured_Caudovirales_phage	89.8	1.2e-21
WP_150338544.1|1184237_1184441_-	hypothetical protein	NA	A0A2H4J8H0	uncultured_Caudovirales_phage	85.1	2.5e-25
WP_074583551.1|1185021_1185282_-	hypothetical protein	NA	A0A2H4JFR3	uncultured_Caudovirales_phage	98.2	7.1e-25
1185206:1185223	attR	CCCAGGGCGGCCAGGCGC	NA	NA	NA	NA
WP_150340689.1|1185278_1185617_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JA92	uncultured_Caudovirales_phage	91.1	2.2e-42
WP_108581872.1|1185664_1185886_-	hypothetical protein	NA	A0A2H4J8H1	uncultured_Caudovirales_phage	42.6	6.3e-06
WP_150338545.1|1185882_1186107_-	hypothetical protein	NA	A0A2H4JG58	uncultured_Caudovirales_phage	86.5	9.1e-29
WP_108582119.1|1186758_1187019_-	DUF1654 domain-containing protein	NA	A0A2H4J8G7	uncultured_Caudovirales_phage	58.5	1.8e-15
WP_150338546.1|1187612_1188110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150338547.1|1188212_1189265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150338548.1|1189874_1190069_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108582124.1|1190091_1190844_-	helix-turn-helix domain-containing protein	NA	A0A2H4J8I0	uncultured_Caudovirales_phage	84.8	2.0e-72
WP_108582125.1|1190888_1191116_+	hypothetical protein	NA	A0A2H4J0V8	uncultured_Caudovirales_phage	55.1	2.1e-12
WP_150338549.1|1191030_1193877_+|tail	phage tail tape measure protein	tail	U5P420	Shigella_phage	47.8	1.2e-112
WP_150338550.1|1193876_1195181_+	hydroxyacid dehydrogenase	NA	B5TK71	Pseudomonas_phage	44.7	3.2e-97
WP_150338551.1|1195187_1196300_+|plate	baseplate protein	plate	B5TK72	Pseudomonas_phage	57.4	9.9e-108
WP_150338552.1|1196296_1196803_+|plate	phage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	69.0	2.3e-59
WP_150338553.1|1196805_1197207_+	hypothetical protein	NA	B5TK74	Pseudomonas_phage	63.8	1.1e-40
WP_150338554.1|1197196_1198234_+|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	62.8	4.9e-117
WP_150338555.1|1198224_1198821_+	DUF2313 domain-containing protein	NA	B5TK76	Pseudomonas_phage	74.9	1.9e-81
WP_150340690.1|1199073_1199775_+|tail	phage tail protein	tail	A9YX14	Burkholderia_phage	52.1	9.2e-51
WP_150338556.1|1199782_1200262_+	DUF4376 domain-containing protein	NA	A0A1S5R1J2	Pseudomonas_phage	52.5	3.5e-25
WP_150338557.1|1200258_1200618_+	DUF1353 domain-containing protein	NA	A0A2H4JDM4	uncultured_Caudovirales_phage	78.4	2.3e-50
WP_150338558.1|1200734_1201208_+	hypothetical protein	NA	A0A2H4JFP9	uncultured_Caudovirales_phage	92.4	2.5e-76
WP_150338559.1|1201207_1201618_+	hypothetical protein	NA	A0A2H4JA72	uncultured_Caudovirales_phage	74.3	1.0e-38
WP_150340691.1|1201722_1201980_+	hypothetical protein	NA	A0A2H4J8E9	uncultured_Caudovirales_phage	84.7	1.2e-32
>prophage 2
NZ_CP044074	Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome	4949413	2315659	2324254	4949413		Enterobacteria_phage(50.0%)	9	NA	NA
WP_042132995.1|2315659_2316574_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	34.4	2.1e-34
WP_007160389.1|2316570_2317107_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	63.1	5.9e-58
WP_007160390.1|2317106_2317988_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.2	1.6e-105
WP_150339065.1|2318060_2319125_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.2	8.9e-98
WP_037006952.1|2319346_2321329_-	polysaccharide biosynthesis protein	NA	K7Y9E1	Megavirus	26.1	6.5e-17
WP_150339067.1|2321339_2322389_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_150339069.1|2322385_2323360_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_007160395.1|2323500_2323722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007160396.1|2323966_2324254_-	integration host factor subunit beta	NA	G3M9Y0	Bacillus_virus	39.1	1.6e-09
>prophage 3
NZ_CP044074	Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome	4949413	3572698	3580981	4949413		Mycobacterium_phage(33.33%)	7	NA	NA
WP_007161291.1|3572698_3572923_+	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	56.8	5.0e-19
WP_027598230.1|3572933_3573338_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	F8WQ19	Bacillus_phage	34.1	2.0e-10
WP_150340036.1|3573319_3575461_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	49.2	5.8e-205
WP_027598228.1|3575483_3576452_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0M4S3B4	Mycobacterium_phage	73.4	1.4e-134
WP_150340039.1|3576956_3578495_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_145249174.1|3578491_3579028_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A2P1EI66	Megavirus	30.5	2.4e-14
WP_150340042.1|3579115_3580981_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	27.6	4.2e-34
>prophage 4
NZ_CP044074	Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome	4949413	3834267	3945107	4949413	plate,transposase,holin	uncultured_Caudovirales_phage(15.38%)	94	NA	NA
WP_150340158.1|3834267_3834975_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_150340160.1|3835192_3835666_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_150340162.1|3835754_3835961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150340164.1|3835957_3837157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150340166.1|3837206_3837914_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_150340168.1|3838352_3838748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150340170.1|3839714_3840044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150340172.1|3840043_3851947_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_150340174.1|3852010_3853717_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA	NA
WP_150340176.1|3854028_3854532_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_150340178.1|3854569_3855160_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_144954895.1|3855236_3855866_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_150340180.1|3856014_3856773_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_150340182.1|3856812_3857346_+	DUF924 family protein	NA	A0A1V0SIY0	Klosneuvirus	32.7	1.7e-17
WP_044343147.1|3857357_3858305_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_144961175.1|3858402_3859203_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_150340184.1|3859229_3859994_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_150340186.1|3860045_3861218_+	MFS transporter	NA	NA	NA	NA	NA
WP_150340188.1|3861260_3861776_-	peroxidase-related enzyme	NA	NA	NA	NA	NA
WP_044343151.1|3861899_3862721_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_027598608.1|3862717_3863389_-	nucleoside/nucleotide kinase family protein	NA	NA	NA	NA	NA
WP_150340190.1|3863662_3865123_+	DUF945 family protein	NA	NA	NA	NA	NA
WP_150340192.1|3865345_3867307_-	DUF4105 domain-containing protein	NA	NA	NA	NA	NA
WP_007160025.1|3867303_3867624_-	DUF2388 domain-containing protein	NA	NA	NA	NA	NA
WP_150340194.1|3867658_3867958_-	DUF2388 domain-containing protein	NA	NA	NA	NA	NA
WP_007160027.1|3868058_3868379_-	DUF2388 domain-containing protein	NA	NA	NA	NA	NA
WP_150340196.1|3868452_3868662_-	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_027600427.1|3868923_3869877_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_150340198.1|3870065_3870704_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_027598615.1|3870905_3871535_+	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_144961162.1|3871712_3873500_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_150340200.1|3873525_3874311_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A076YN96	Rhizobium_phage	30.9	1.6e-14
WP_037006569.1|3874326_3875424_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_027600430.1|3875890_3876829_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_027598620.1|3877099_3878038_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_027598621.1|3878154_3878997_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_150340202.1|3879000_3880233_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	35.1	1.1e-25
WP_027598623.1|3880520_3880823_-	HigA family addiction module antidote protein	NA	A0A191ZBZ4	Erwinia_phage	38.8	5.0e-06
WP_144945649.1|3880916_3881195_-	plasmid maintenance system killer protein	NA	NA	NA	NA	NA
WP_077171181.1|3881449_3882307_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_007160039.1|3882405_3883035_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
WP_027598627.1|3883050_3886071_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
WP_017639232.1|3886067_3886367_-	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_017639231.1|3886378_3887629_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
WP_074583431.1|3887708_3888962_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	54.3	5.2e-105
WP_150340204.1|3889176_3890535_+	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_007160045.1|3890616_3891045_+	universal stress protein	NA	NA	NA	NA	NA
WP_007160046.1|3891103_3891883_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_007160047.1|3891963_3892605_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_042134854.1|3892622_3893219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077171187.1|3893365_3894031_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_027598633.1|3894046_3894898_+	urea carboxylase-associated family protein	NA	NA	NA	NA	NA
WP_007160051.1|3894958_3895861_-	acetylglutamate kinase	NA	NA	NA	NA	NA
WP_037006571.1|3895935_3898497_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	30.4	7.0e-56
WP_027598635.1|3898542_3898998_-	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	62.4	2.7e-51
WP_027600436.1|3898990_3900214_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	31.6	4.1e-38
WP_027598637.1|3900349_3901024_+	JAB domain-containing protein	NA	NA	NA	NA	NA
WP_150340206.1|3901362_3902901_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_027600438.1|3902930_3903425_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_150340208.1|3903439_3904918_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_150340210.1|3904924_3905329_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_150340212.1|3905333_3907118_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_144945619.1|3907081_3908092_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_150340214.1|3908107_3910636_+	type VI secretion system ATPase TssH	NA	A0A1C3S747	Escherichia_phage	31.8	6.8e-88
WP_150340216.1|3910632_3912129_+	AAA domain-containing protein	NA	NA	NA	NA	NA
WP_144954823.1|3912140_3912269_+	type VI secretion protein	NA	NA	NA	NA	NA
WP_150340218.1|3912283_3913474_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_027598647.1|3913475_3913946_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_150340220.1|3913949_3915281_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_027598649.1|3915283_3916171_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_150340222.1|3916186_3919618_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_150340224.1|3919617_3920349_+	SpoIIE family protein phosphatase	NA	NA	NA	NA	NA
WP_150340226.1|3920345_3921311_+	protein kinase	NA	M1PAV8	Moumouvirus	27.8	8.6e-15
WP_150340228.1|3921338_3923378_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	28.7	6.4e-36
WP_150340230.1|3923433_3925767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150340232.1|3925750_3926125_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_150340234.1|3926127_3926799_-	uracil-DNA glycosylase	NA	NA	NA	NA	NA
WP_042134870.1|3926939_3927317_+	glutaredoxin	NA	NA	NA	NA	NA
WP_027598761.1|3927483_3928581_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_027598760.1|3928908_3930201_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
WP_144945580.1|3930376_3932002_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	39.8	6.8e-57
WP_027598758.1|3932144_3933770_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.2	7.9e-37
WP_042135022.1|3933867_3934500_+	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_037007709.1|3934510_3934921_+	DUF2141 domain-containing protein	NA	NA	NA	NA	NA
WP_150340236.1|3935653_3936460_-	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_044341226.1|3936456_3937665_-	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_027598754.1|3937757_3938654_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007160170.1|3938694_3939018_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_007160169.1|3939236_3939452_+	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_042135014.1|3939495_3939723_+	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
WP_150340238.1|3939811_3940981_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_150340240.1|3941112_3942651_+	nitric oxide reductase transcriptional regulator NorR	NA	NA	NA	NA	NA
WP_150340242.1|3942668_3943586_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_027598750.1|3943607_3945107_-|holin	choline-sulfatase	holin	NA	NA	NA	NA
