assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	1	89138-89241	1	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	CGGTAGTGCCGGCCGCTGGCCGGCAA	26	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|180aa|up_6|NZ_CP044092.1_81959_82499_+,NA|97aa|up_5|NZ_CP044092.1_82513_82804_+,NA|221aa|up_1|NZ_CP044092.1_86832_87495_-,NA	NA|697aa|up_9|NZ_CP044092.1_78464_80555_+	PRK11249, katE, hydroperoxidase II; Provisional	NA|164aa|up_8|NZ_CP044092.1_80577_81069_+	PRK14900, valS, valyl-tRNA synthetase; Provisional	NA|247aa|up_7|NZ_CP044092.1_81078_81819_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|180aa|up_6|NZ_CP044092.1_81959_82499_+	NA	NA|97aa|up_5|NZ_CP044092.1_82513_82804_+	NA	NA|709aa|up_4|NZ_CP044092.1_82893_85020_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|321aa|up_3|NZ_CP044092.1_85252_86215_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|226aa|up_2|NZ_CP044092.1_86219_86897_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|221aa|up_1|NZ_CP044092.1_86832_87495_-	NA	NA|431aa|up_0|NZ_CP044092.1_87612_88905_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|62aa|down_0|NZ_CP044092.1_89276_89462_-	COG3242, COG3242, Uncharacterized protein conserved in bacteria [Function unknown]	NA|288aa|down_1|NZ_CP044092.1_89529_90393_-	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|378aa|down_2|NZ_CP044092.1_90389_91523_-	TIGR01933, Protein_HflK, HflK protein	NA|332aa|down_3|NZ_CP044092.1_91676_92672_+	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases	NA|124aa|down_4|NZ_CP044092.1_92760_93132_+	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains	NA|298aa|down_5|NZ_CP044092.1_93220_94114_-	PRK10266, PRK10266, curved DNA-binding protein	NA|161aa|down_6|NZ_CP044092.1_94374_94857_+	cd03013, PRX5_like, Peroxiredoxin (PRX) family, PRX5-like subfamily; members are similar to the human protein, PRX5, a homodimeric TRX peroxidase, widely expressed in tissues and found cellularly in mitochondria, peroxisomes and the cytosol	NA|192aa|down_7|NZ_CP044092.1_94886_95462_+	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|794aa|down_8|NZ_CP044092.1_95534_97916_-	COG4953, PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane]	NA|1636aa|down_9|NZ_CP044092.1_97980_102888_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	2	267760-267873	2	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	TTGGGTAGGTGCGGACCGTTGGTCCGCAC	29	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA,NA	NA|430aa|up_9|NZ_CP044092.1_252816_254106_+	PRK10604, PRK10604, sensor protein RstB; Provisional	NA|267aa|up_8|NZ_CP044092.1_254246_255047_+	pfam06629, MipA, MltA-interacting protein MipA	NA|862aa|up_7|NZ_CP044092.1_255119_257705_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|274aa|up_6|NZ_CP044092.1_257886_258708_-	pfam11219, DUF3014, Protein of unknown function (DUF3014)	NA|237aa|up_5|NZ_CP044092.1_258878_259589_+	pfam14497, GST_C_3, Glutathione S-transferase, C-terminal domain	NA|535aa|up_4|NZ_CP044092.1_259668_261273_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|573aa|up_3|NZ_CP044092.1_261875_263594_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|286aa|up_2|NZ_CP044092.1_263726_264584_-	pfam08239, SH3_3, Bacterial SH3 domain	NA|161aa|up_1|NZ_CP044092.1_264620_265103_-	pfam12098, DUF3574, Protein of unknown function (DUF3574)	NA|812aa|up_0|NZ_CP044092.1_265318_267754_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|253aa|down_0|NZ_CP044092.1_267968_268727_+	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2	NA|594aa|down_1|NZ_CP044092.1_268768_270550_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|455aa|down_2|NZ_CP044092.1_270546_271911_+	TIGR02400, Alphaalpha-trehalose-phosphate_synthase, alpha,alpha-trehalose-phosphate synthase [UDP-forming]	NA|146aa|down_3|NZ_CP044092.1_271983_272421_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|169aa|down_4|NZ_CP044092.1_272395_272902_-	pfam13761, DUF4166, Domain of unknown function (DUF4166)	NA|257aa|down_5|NZ_CP044092.1_272922_273693_-	PRK10723, PRK10723, polyphenol oxidase	NA|330aa|down_6|NZ_CP044092.1_273692_274682_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|296aa|down_7|NZ_CP044092.1_274795_275683_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|401aa|down_8|NZ_CP044092.1_275873_277076_+	pfam03583, LIP, Secretory lipase	NA|305aa|down_9|NZ_CP044092.1_277225_278140_-	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	3	375404-375516	3	CRISPRCasFinder	no	cas3	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Unclear	GCGTGCCAACCAAGGTTGGCACCTACCGAAGGCGGGTGCGG	41	0	0	NA	NA	NA	1	1	Unclear	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|215aa|up_7|NZ_CP044092.1_362437_363082_+,NA|248aa|up_6|NZ_CP044092.1_363258_364002_-,NA	NA|353aa|up_9|NZ_CP044092.1_358363_359422_-	pfam11104, PilM_2, Type IV pilus assembly protein PilM;	NA|808aa|up_8|NZ_CP044092.1_359641_362065_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|215aa|up_7|NZ_CP044092.1_362437_363082_+	NA	NA|248aa|up_6|NZ_CP044092.1_363258_364002_-	NA	NA|1468aa|up_5|NZ_CP044092.1_364071_368475_-	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll	NA|236aa|up_4|NZ_CP044092.1_368542_369250_-	PRK15308, PRK15308, fimbrial protein TcfA	NA|378aa|up_3|NZ_CP044092.1_369266_370400_-	pfam07434, CblD, CblD like pilus biogenesis initiator	NA|909aa|up_2|NZ_CP044092.1_370396_373123_-	PRK15310, PRK15310, fimbrial outer membrane usher protein TcfC; Provisional	NA|170aa|up_1|NZ_CP044092.1_373173_373683_-	pfam04449, Fimbrial_CS1, CS1 type fimbrial major subunit	NA|363aa|up_0|NZ_CP044092.1_374201_375290_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|426aa|down_0|NZ_CP044092.1_375655_376933_-	PRK05614, gltA, citrate synthase	NA|81aa|down_1|NZ_CP044092.1_377229_377472_-	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|313aa|down_2|NZ_CP044092.1_377560_378499_-	cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans	cas3|704aa|down_3|NZ_CP044092.1_378968_381080_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|129aa|down_4|NZ_CP044092.1_381087_381474_-	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|721aa|down_5|NZ_CP044092.1_381622_383785_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|100aa|down_6|NZ_CP044092.1_383890_384190_-	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed	NA|222aa|down_7|NZ_CP044092.1_384300_384966_-	PRK00300, gmk, guanylate kinase; Provisional	NA|1023aa|down_8|NZ_CP044092.1_385257_388326_+	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit	NA|306aa|down_9|NZ_CP044092.1_388336_389254_+	TIGR01582, Formate_dehydrogenase_iron-sulfur_subunit, formate dehydrogenase, beta subunit, Fe-S containing
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	4	467341-467449	4	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	CAGTGCCAACCAAGGTTGGCACCTACCAGGGC	32	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA,NA	NA|579aa|up_9|NZ_CP044092.1_456774_458511_+	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed	NA|84aa|up_8|NZ_CP044092.1_458494_458746_+	COG3978, COG3978, Acetolactate synthase (isozyme II), small (regulatory) subunit [Function unknown]	NA|364aa|up_7|NZ_CP044092.1_458842_459934_+	PRK08813, PRK08813, threonine dehydratase; Provisional	NA|529aa|up_6|NZ_CP044092.1_459930_461517_+	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated	NA|260aa|up_5|NZ_CP044092.1_461527_462307_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|473aa|up_4|NZ_CP044092.1_462367_463786_+	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit	NA|193aa|up_3|NZ_CP044092.1_463785_464364_+	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|354aa|up_2|NZ_CP044092.1_464353_465415_+	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional	NA|258aa|up_1|NZ_CP044092.1_465516_466290_-	PRK12744, PRK12744, SDR family oxidoreductase	NA|302aa|up_0|NZ_CP044092.1_466407_467313_+	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|1054aa|down_0|NZ_CP044092.1_467471_470633_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|377aa|down_1|NZ_CP044092.1_470637_471768_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|227aa|down_2|NZ_CP044092.1_471885_472566_+	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region	NA|216aa|down_3|NZ_CP044092.1_472702_473350_+	COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|453aa|down_4|NZ_CP044092.1_473366_474725_+	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|406aa|down_5|NZ_CP044092.1_474812_476030_-	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|433aa|down_6|NZ_CP044092.1_476246_477545_-	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed	NA|306aa|down_7|NZ_CP044092.1_477605_478523_+	PRK08733, PRK08733, LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase	NA|444aa|down_8|NZ_CP044092.1_479078_480410_-	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|372aa|down_9|NZ_CP044092.1_480390_481506_-	cd03819, GT4_WavL-like, Vibrio cholerae WavL and similar sequences
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	5	564836-564966	5	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	CGACCAAGGTCGGCACCCACCAGAG	25	0	0	NA	NA	NA	2	2	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|134aa|up_9|NZ_CP044092.1_554003_554405_+,NA|114aa|up_7|NZ_CP044092.1_557673_558015_+,NA|112aa|up_2|NZ_CP044092.1_562558_562894_-,NA|145aa|up_0|NZ_CP044092.1_564347_564782_+,NA	NA|134aa|up_9|NZ_CP044092.1_554003_554405_+	NA	NA|954aa|up_8|NZ_CP044092.1_554449_557311_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|114aa|up_7|NZ_CP044092.1_557673_558015_+	NA	NA|136aa|up_6|NZ_CP044092.1_558024_558432_-	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]	NA|662aa|up_5|NZ_CP044092.1_558582_560568_+	PRK11619, PRK11619, lytic murein transglycosylase; Provisional	NA|407aa|up_4|NZ_CP044092.1_560774_561995_+	PRK10885, cca, multifunctional CCA addition/repair protein	NA|145aa|up_3|NZ_CP044092.1_562074_562509_-	pfam07179, SseB, SseB protein N-terminal domain	NA|112aa|up_2|NZ_CP044092.1_562558_562894_-	NA	NA|346aa|up_1|NZ_CP044092.1_562897_563935_-	pfam03572, Peptidase_S41, Peptidase family S41	NA|145aa|up_0|NZ_CP044092.1_564347_564782_+	NA	NA|1010aa|down_0|NZ_CP044092.1_564991_568021_-	cd01344, PL2_Passenger_AT, Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria	NA|356aa|down_1|NZ_CP044092.1_568319_569387_-	COG4299, COG4299, Uncharacterized protein conserved in bacteria [Function unknown]	NA|383aa|down_2|NZ_CP044092.1_569386_570535_-	COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]	NA|343aa|down_3|NZ_CP044092.1_570534_571563_-	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane]	NA|356aa|down_4|NZ_CP044092.1_571570_572638_-	cd01545, PBP1_SalR, ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators	NA|430aa|down_5|NZ_CP044092.1_572677_573967_-	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|340aa|down_6|NZ_CP044092.1_574345_575365_+	PRK12408, PRK12408, glucokinase; Provisional	NA|903aa|down_7|NZ_CP044092.1_575508_578217_+	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor	NA|786aa|down_8|NZ_CP044092.1_578328_580686_+	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin	NA|131aa|down_9|NZ_CP044092.1_580791_581184_-	COG5652, COG5652, Predicted integral membrane protein [Function unknown]
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	6	600441-600541	6	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	GCTCGCTGTAAGCGAGGGGCTGAGGGT	27	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|412aa|up_5|NZ_CP044092.1_592490_593726_-,NA	NA|606aa|up_9|NZ_CP044092.1_587634_589452_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|128aa|up_8|NZ_CP044092.1_589686_590070_-	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only]	NA|348aa|up_7|NZ_CP044092.1_590241_591285_+	PRK11579, PRK11579, putative oxidoreductase; Provisional	NA|302aa|up_6|NZ_CP044092.1_591574_592480_-	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase	NA|412aa|up_5|NZ_CP044092.1_592490_593726_-	NA	NA|197aa|up_4|NZ_CP044092.1_593743_594334_-	pfam10001, DUF2242, Uncharacterized protein conserved in bacteria (DUF2242)	NA|726aa|up_3|NZ_CP044092.1_594579_596757_-	PRK11186, PRK11186, carboxy terminal-processing peptidase	NA|337aa|up_2|NZ_CP044092.1_597036_598047_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|237aa|up_1|NZ_CP044092.1_598064_598775_-	PRK14342, PRK14342, lipoyl(octanoyl) transferase LipB	NA|93aa|up_0|NZ_CP044092.1_598762_599041_-	PRK00907, PRK00907, hypothetical protein; Provisional	NA|405aa|down_0|NZ_CP044092.1_600705_601920_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|423aa|down_1|NZ_CP044092.1_602020_603289_-	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|382aa|down_2|NZ_CP044092.1_603285_604431_-	TIGR02282, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase B	NA|365aa|down_3|NZ_CP044092.1_605422_606517_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|371aa|down_4|NZ_CP044092.1_606639_607752_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|692aa|down_5|NZ_CP044092.1_607748_609824_-	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|162aa|down_6|NZ_CP044092.1_609827_610313_-	COG2891, MreD, Cell shape-determining protein [Cell envelope biogenesis, outer membrane]	NA|394aa|down_7|NZ_CP044092.1_610309_611491_-	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|349aa|down_8|NZ_CP044092.1_611612_612659_-	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|313aa|down_9|NZ_CP044092.1_612942_613881_+	cd01942, ribokinase_group_A, Ribokinase-like subgroup A
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	7	1800726-1800827	7	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	GGTAGGTGCCGACCGTTGGTCGGCA	25	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|88aa|up_3|NZ_CP044092.1_1797860_1798124_-,NA	NA|160aa|up_9|NZ_CP044092.1_1791578_1792058_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|435aa|up_8|NZ_CP044092.1_1792207_1793512_+	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|356aa|up_7|NZ_CP044092.1_1793490_1794558_+	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|188aa|up_6|NZ_CP044092.1_1794647_1795211_-	pfam11454, DUF3016, Protein of unknown function (DUF3016)	NA|663aa|up_5|NZ_CP044092.1_1795455_1797444_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|97aa|up_4|NZ_CP044092.1_1797487_1797778_+	pfam11607, DUF3247, Protein of unknown function (DUF3247)	NA|88aa|up_3|NZ_CP044092.1_1797860_1798124_-	NA	NA|355aa|up_2|NZ_CP044092.1_1798280_1799345_+	COG2813, RsmC, 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]	NA|234aa|up_1|NZ_CP044092.1_1799341_1800043_+	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like	NA|228aa|up_0|NZ_CP044092.1_1800039_1800723_+	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|403aa|down_0|NZ_CP044092.1_1800837_1802046_-	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I	NA|172aa|down_1|NZ_CP044092.1_1802045_1802561_-	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA|365aa|down_2|NZ_CP044092.1_1802751_1803846_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|304aa|down_3|NZ_CP044092.1_1804224_1805136_-	cd07739, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|213aa|down_4|NZ_CP044092.1_1805274_1805913_-	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]	NA|310aa|down_5|NZ_CP044092.1_1806021_1806951_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|264aa|down_6|NZ_CP044092.1_1806947_1807739_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|219aa|down_7|NZ_CP044092.1_1807802_1808459_+	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP	NA|614aa|down_8|NZ_CP044092.1_1808559_1810401_-	TIGR01779, Vitamin_B12_transporter_BtuB, TonB-dependent vitamin B12 receptor	NA|193aa|down_9|NZ_CP044092.1_1810882_1811461_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	8	1840807-1841021	1	PILER-CR	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	CGACGCCAAGCTCGCCCGCCAGGAAGCCGAGC	32	0	0	NA	NA	NA	2	2	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|122aa|up_0|NZ_CP044092.1_1840106_1840472_+,NA|143aa|down_6|NZ_CP044092.1_1850266_1850695_+,NA|515aa|down_7|NZ_CP044092.1_1851038_1852583_+	NA|121aa|up_9|NZ_CP044092.1_1825531_1825894_-	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|880aa|up_8|NZ_CP044092.1_1826086_1828726_+	pfam00593, TonB_dep_Rec, TonB dependent receptor	NA|865aa|up_7|NZ_CP044092.1_1828800_1831395_+	cd06238, M14-like, Peptidase M14-like domain; uncharacterized subgroup	NA|471aa|up_6|NZ_CP044092.1_1831936_1833349_-	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|330aa|up_5|NZ_CP044092.1_1834286_1835276_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|223aa|up_4|NZ_CP044092.1_1835290_1835959_+	TIGR01262, Maleylacetoacetate_isomerase, maleylacetoacetate isomerase	NA|487aa|up_3|NZ_CP044092.1_1836002_1837463_-	TIGR03914, SPO1_DNA_polymerase-related_protein, uracil-DNA glycosylase family domain	NA|428aa|up_2|NZ_CP044092.1_1837443_1838727_-	TIGR03916, hypothetical_protein, putative DNA modification/repair radical SAM protein	NA|376aa|up_1|NZ_CP044092.1_1838857_1839985_-	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|122aa|up_0|NZ_CP044092.1_1840106_1840472_+	NA	NA|79aa|down_0|NZ_CP044092.1_1841677_1841914_+	pfam04325, DUF465, Protein of unknown function (DUF465)	NA|457aa|down_1|NZ_CP044092.1_1842214_1843585_+	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]	NA|391aa|down_2|NZ_CP044092.1_1843708_1844881_+	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme	NA|275aa|down_3|NZ_CP044092.1_1844880_1845705_+	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|428aa|down_4|NZ_CP044092.1_1845694_1846978_+	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system	NA|1002aa|down_5|NZ_CP044092.1_1846998_1850004_+	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins	NA|143aa|down_6|NZ_CP044092.1_1850266_1850695_+	NA	NA|515aa|down_7|NZ_CP044092.1_1851038_1852583_+	NA	NA|437aa|down_8|NZ_CP044092.1_1852582_1853893_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|373aa|down_9|NZ_CP044092.1_1853912_1855031_-	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	9	2027110-2027209	8	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	TCATCCACGCATGGCGTGGATCT	23	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|617aa|up_3|NZ_CP044092.1_2020628_2022479_-,NA|309aa|down_5|NZ_CP044092.1_2034251_2035178_+,NA|139aa|down_6|NZ_CP044092.1_2035707_2036124_+	NA|169aa|up_9|NZ_CP044092.1_2013695_2014202_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|404aa|up_8|NZ_CP044092.1_2014315_2015527_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|572aa|up_7|NZ_CP044092.1_2015849_2017565_+	cd07986, LPLAT_ACT14924-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924	NA|267aa|up_6|NZ_CP044092.1_2017561_2018362_+	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|353aa|up_5|NZ_CP044092.1_2018512_2019571_+	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|337aa|up_4|NZ_CP044092.1_2019621_2020632_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|617aa|up_3|NZ_CP044092.1_2020628_2022479_-	NA	NA|276aa|up_2|NZ_CP044092.1_2022617_2023445_-	PRK08317, PRK08317, hypothetical protein; Provisional	NA|332aa|up_1|NZ_CP044092.1_2023502_2024498_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|306aa|up_0|NZ_CP044092.1_2024911_2025829_-	cd08475, PBP2_CrgA_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|433aa|down_0|NZ_CP044092.1_2028198_2029497_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|324aa|down_1|NZ_CP044092.1_2029690_2030662_+	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR)	NA|65aa|down_2|NZ_CP044092.1_2030974_2031169_+	pfam10636, hemP, Hemin uptake protein hemP	NA|739aa|down_3|NZ_CP044092.1_2031358_2033575_+	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|200aa|down_4|NZ_CP044092.1_2033579_2034179_+	COG3720, HemS, Putative heme degradation protein [Inorganic ion transport and metabolism]	NA|309aa|down_5|NZ_CP044092.1_2034251_2035178_+	NA	NA|139aa|down_6|NZ_CP044092.1_2035707_2036124_+	NA	NA|839aa|down_7|NZ_CP044092.1_2036202_2038719_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|216aa|down_8|NZ_CP044092.1_2038715_2039363_-	COG4181, COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|215aa|down_9|NZ_CP044092.1_2039438_2040083_+	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	10	2090865-2090969	9	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	TTTGCCGGCCAGCGGCCGGCACTACC	26	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|109aa|up_3|NZ_CP044092.1_2088036_2088363_-,NA|140aa|down_0|NZ_CP044092.1_2091030_2091450_-	NA|185aa|up_9|NZ_CP044092.1_2081601_2082156_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|312aa|up_8|NZ_CP044092.1_2082152_2083088_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|194aa|up_7|NZ_CP044092.1_2083084_2083666_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|774aa|up_6|NZ_CP044092.1_2083997_2086319_+	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|360aa|up_5|NZ_CP044092.1_2086370_2087450_+	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|154aa|up_4|NZ_CP044092.1_2087571_2088033_-	pfam11304, DUF3106, Protein of unknown function (DUF3106)	NA|109aa|up_3|NZ_CP044092.1_2088036_2088363_-	NA	NA|195aa|up_2|NZ_CP044092.1_2088359_2088944_-	PRK09047, PRK09047, RNA polymerase factor sigma-70; Validated	NA|107aa|up_1|NZ_CP044092.1_2089042_2089363_+	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|487aa|up_0|NZ_CP044092.1_2089359_2090820_+	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|140aa|down_0|NZ_CP044092.1_2091030_2091450_-	NA	NA|184aa|down_1|NZ_CP044092.1_2091572_2092124_+	TIGR03406, FeS_long_SufT, probable FeS assembly SUF system protein SufT	NA|365aa|down_2|NZ_CP044092.1_2092183_2093278_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|581aa|down_3|NZ_CP044092.1_2093730_2095473_+	cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13	NA|162aa|down_4|NZ_CP044092.1_2095594_2096080_-	COG0252, AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|112aa|down_5|NZ_CP044092.1_2096159_2096495_-	pfam09842, DUF2069, Predicted membrane protein (DUF2069)	NA|198aa|down_6|NZ_CP044092.1_2096491_2097085_-	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|425aa|down_7|NZ_CP044092.1_2097162_2098437_+	PRK04214, rbn, ribonuclease BN/unknown domain fusion protein; Reviewed	NA|190aa|down_8|NZ_CP044092.1_2098433_2099003_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|261aa|down_9|NZ_CP044092.1_2099578_2100361_-	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	11	2620593-2620663	10	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	TGAGGTTGCCGGCCAGCGGCCGG	23	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|127aa|up_2|NZ_CP044092.1_2619205_2619586_+,NA|80aa|down_1|NZ_CP044092.1_2622188_2622428_+,NA|586aa|down_5|NZ_CP044092.1_2625418_2627176_-,NA|160aa|down_9|NZ_CP044092.1_2644949_2645429_+	NA|459aa|up_9|NZ_CP044092.1_2613531_2614908_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|359aa|up_8|NZ_CP044092.1_2614999_2616076_+	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|271aa|up_7|NZ_CP044092.1_2616072_2616885_+	PRK09266, PRK09266, hypothetical protein; Provisional	NA|87aa|up_6|NZ_CP044092.1_2616982_2617243_+	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|171aa|up_5|NZ_CP044092.1_2617287_2617800_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|253aa|up_4|NZ_CP044092.1_2617808_2618567_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|134aa|up_3|NZ_CP044092.1_2618721_2619123_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|127aa|up_2|NZ_CP044092.1_2619205_2619586_+	NA	NA|150aa|up_1|NZ_CP044092.1_2619649_2620099_+	COG5649, COG5649, Uncharacterized conserved protein [Function unknown]	NA|137aa|up_0|NZ_CP044092.1_2620137_2620548_+	COG5649, COG5649, Uncharacterized conserved protein [Function unknown]	NA|487aa|down_0|NZ_CP044092.1_2620665_2622126_-	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA	NA|80aa|down_1|NZ_CP044092.1_2622188_2622428_+	NA	NA|136aa|down_2|NZ_CP044092.1_2622437_2622845_+	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|201aa|down_3|NZ_CP044092.1_2622883_2623486_-	pfam06078, DUF937, Bacterial protein of unknown function (DUF937)	NA|548aa|down_4|NZ_CP044092.1_2623594_2625238_-	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase	NA|586aa|down_5|NZ_CP044092.1_2625418_2627176_-	NA	NA|864aa|down_6|NZ_CP044092.1_2627375_2629967_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|131aa|down_7|NZ_CP044092.1_2630102_2630495_-	cd05143, Barstar_SaI14_like, Barstar_SaI14_like contains sequences that are similar to SaI14, an RNAase inhibitor, which are members of the Barstar family	NA|581aa|down_8|NZ_CP044092.1_2630793_2632536_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|160aa|down_9|NZ_CP044092.1_2644949_2645429_+	NA
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	12	3613109-3613216	11	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	CATCCACGCAGGGCGTGGATCTACC	25	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA|113aa|up_4|NZ_CP044092.1_3603397_3603736_+,NA|72aa|down_0|NZ_CP044092.1_3613855_3614071_-,NA|157aa|down_5|NZ_CP044092.1_3617736_3618207_-,NA|128aa|down_9|NZ_CP044092.1_3622095_3622479_-	NA|136aa|up_9|NZ_CP044092.1_3600206_3600614_-	PRK12629, flgC, flagellar basal body rod protein FlgC; Provisional	NA|132aa|up_8|NZ_CP044092.1_3600617_3601013_-	PRK12620, flgB, flagellar basal body rod protein FlgB; Provisional	NA|315aa|up_7|NZ_CP044092.1_3601150_3602095_-	cd19924, REC_CheV-like, phosphoacceptor receiver (REC) domain of chemotaxis protein CheV and similar proteins	NA|219aa|up_6|NZ_CP044092.1_3602363_3603020_+	PRK12617, flgA, flagellar basal body P-ring formation protein FlgA	NA|102aa|up_5|NZ_CP044092.1_3603095_3603401_+	TIGR03824, FlgM_jcvi, flagellar biosynthesis anti-sigma factor FlgM	NA|113aa|up_4|NZ_CP044092.1_3603397_3603736_+	NA	NA|406aa|up_3|NZ_CP044092.1_3603827_3605045_+	cd16943, HATPase_AtoS-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 AtoS	NA|591aa|up_2|NZ_CP044092.1_3606298_3608071_-	cd01948, EAL, EAL domain	NA|701aa|up_1|NZ_CP044092.1_3608075_3610178_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|920aa|up_0|NZ_CP044092.1_3610309_3613069_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|72aa|down_0|NZ_CP044092.1_3613855_3614071_-	NA	NA|397aa|down_1|NZ_CP044092.1_3614169_3615360_-	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain	NA|205aa|down_2|NZ_CP044092.1_3615523_3616138_-	PRK00218, PRK00218, lysogenization regulator HflD	NA|381aa|down_3|NZ_CP044092.1_3616134_3617277_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|154aa|down_4|NZ_CP044092.1_3617273_3617735_-	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function	NA|157aa|down_5|NZ_CP044092.1_3617736_3618207_-	NA	NA|109aa|down_6|NZ_CP044092.1_3618319_3618646_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|271aa|down_7|NZ_CP044092.1_3618780_3619593_-	COG3570, StrB, Streptomycin 6-kinase [Defense mechanisms]	NA|762aa|down_8|NZ_CP044092.1_3619731_3622017_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|128aa|down_9|NZ_CP044092.1_3622095_3622479_-	NA
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	13	4420410-4420634	12	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	GGCTTGGCTGCAGCCTTCTTCACC	24	0	0	NA	NA	NA	4	4	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA,NA	NA|318aa|up_9|NZ_CP044092.1_4408537_4409491_-	TIGR01850, N-acetyl-gamma-glutamyl-phosphate_reductase, N-acetyl-gamma-glutamyl-phosphate reductase, common form	NA|201aa|up_8|NZ_CP044092.1_4409487_4410090_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|443aa|up_7|NZ_CP044092.1_4410093_4411422_-	PRK04531, PRK04531, acetylglutamate kinase; Provisional	NA|363aa|up_6|NZ_CP044092.1_4411447_4412536_-	PRK08737, PRK08737, acetylornithine deacetylase; Provisional	NA|399aa|up_5|NZ_CP044092.1_4412687_4413884_-	PRK04527, PRK04527, argininosuccinate synthase; Provisional	NA|337aa|up_4|NZ_CP044092.1_4414003_4415014_-	PRK04523, PRK04523, N-acetylornithine carbamoyltransferase; Reviewed	NA|188aa|up_3|NZ_CP044092.1_4415348_4415912_-	PRK11280, PRK11280, hypothetical protein; Provisional	NA|459aa|up_2|NZ_CP044092.1_4416099_4417476_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|151aa|up_1|NZ_CP044092.1_4417530_4417983_+	pfam02657, SufE, Fe-S metabolism associated domain	NA|416aa|up_0|NZ_CP044092.1_4417979_4419227_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|85aa|down_0|NZ_CP044092.1_4421100_4421355_+	PRK00041, PRK00041, hypothetical protein; Validated	NA|449aa|down_1|NZ_CP044092.1_4421356_4422703_+	PRK09236, PRK09236, dihydroorotase; Reviewed	NA|303aa|down_2|NZ_CP044092.1_4422642_4423551_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|235aa|down_3|NZ_CP044092.1_4423656_4424361_-	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|232aa|down_4|NZ_CP044092.1_4424372_4425068_-	PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional	NA|239aa|down_5|NZ_CP044092.1_4425064_4425781_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|448aa|down_6|NZ_CP044092.1_4425806_4427150_-	PRK09045, PRK09045, TRZ/ATZ family hydrolase	NA|189aa|down_7|NZ_CP044092.1_4427350_4427917_-	PRK00529, PRK00529, elongation factor P; Validated	NA|347aa|down_8|NZ_CP044092.1_4428013_4429054_+	TIGR03821, EFP_modif_epmB, EF-P beta-lysylation protein EpmB	NA|709aa|down_9|NZ_CP044092.1_4429119_4431246_-	cd01948, EAL, EAL domain
GCF_008693985.1_ASM869398v1	NZ_CP044092	Stenotrophomonas maltophilia strain FDAARGOS_649 chromosome, complete genome	14	4579135-4579242	13	CRISPRCasFinder	no		DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	Orphan	TTGGTCGGCACCGCCTTCATCCACGCA	27	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,WYL,PD-DExK,DEDDh,csa3,Cas9_archaeal	NA,NA	NA|165aa|up_9|NZ_CP044092.1_4568553_4569048_+	COG3865, COG3865, Uncharacterized protein conserved in bacteria [Function unknown]	NA|225aa|up_8|NZ_CP044092.1_4570900_4571575_-	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|103aa|up_7|NZ_CP044092.1_4571668_4571977_-	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|307aa|up_6|NZ_CP044092.1_4572003_4572924_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|453aa|up_5|NZ_CP044092.1_4573042_4574401_-	PRK06116, PRK06116, glutathione reductase; Validated	NA|417aa|up_4|NZ_CP044092.1_4574397_4575648_-	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|415aa|up_3|NZ_CP044092.1_4575651_4576896_-	COG2311, COG2311, Predicted membrane protein [Function unknown]	NA|161aa|up_2|NZ_CP044092.1_4576995_4577478_-	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|180aa|up_1|NZ_CP044092.1_4577590_4578130_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|258aa|up_0|NZ_CP044092.1_4578261_4579035_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|445aa|down_0|NZ_CP044092.1_4579342_4580677_-	pfam00375, SDF, Sodium:dicarboxylate symporter family	NA|569aa|down_1|NZ_CP044092.1_4580830_4582537_+	smart00098, alkPPc, Alkaline phosphatase homologues	NA|182aa|down_2|NZ_CP044092.1_4582533_4583079_+	pfam14903, WG_beta_rep, WG containing repeat	NA|445aa|down_3|NZ_CP044092.1_4583571_4584906_+	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional	NA|87aa|down_4|NZ_CP044092.1_4584942_4585203_+	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional	NA|293aa|down_5|NZ_CP044092.1_4585192_4586071_+	PRK10581, PRK10581, (2E,6E)-farnesyl diphosphate synthase	NA|125aa|down_6|NZ_CP044092.1_4586152_4586527_-	pfam09685, DUF4870, Domain of unknown function (DUF4870)	NA|456aa|down_7|NZ_CP044092.1_4586614_4587982_-	PRK11040, PRK11040, peptidase PmbA; Provisional	NA|196aa|down_8|NZ_CP044092.1_4588050_4588638_+	PRK05255, PRK05255, ribosome-associated protein	NA|482aa|down_9|NZ_CP044092.1_4588679_4590125_-	PRK10735, tldD, protease TldD; Provisional
