assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	1	2160907-2161039	1	CRISPRCasFinder	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	AGCCCGTCCGGCGATTGAGGACGAGGCCGCAGGCCGA	37	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA|144aa|up_9|NZ_CP023690.1_2149724_2150156_+,NA	NA|144aa|up_9|NZ_CP023690.1_2149724_2150156_+	NA	NA|175aa|up_8|NZ_CP023690.1_2150163_2150688_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|175aa|up_7|NZ_CP023690.1_2150728_2151253_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|397aa|up_6|NZ_CP023690.1_2151327_2152518_-	cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins	NA|230aa|up_5|NZ_CP023690.1_2152935_2153625_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|515aa|up_4|NZ_CP023690.1_2153697_2155242_-	PRK14995, PRK14995, SmvA family efflux MFS transporter	NA|193aa|up_3|NZ_CP023690.1_2155238_2155817_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|326aa|up_2|NZ_CP023690.1_2155921_2156899_-	cd19098, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein	NA|477aa|up_1|NZ_CP023690.1_2157022_2158453_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|398aa|up_0|NZ_CP023690.1_2158546_2159740_-	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|182aa|down_0|NZ_CP023690.1_2161068_2161614_-	PRK03341, PRK03341, arginine repressor; Provisional	NA|420aa|down_1|NZ_CP023690.1_2161621_2162881_-	PRK03244, argD, acetylornithine transaminase	NA|306aa|down_2|NZ_CP023690.1_2162877_2163795_-	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|384aa|down_3|NZ_CP023690.1_2163861_2165013_-	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA|343aa|down_4|NZ_CP023690.1_2165009_2166038_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|740aa|down_5|NZ_CP023690.1_2166224_2168444_-	pfam03971, IDH, Monomeric isocitrate dehydrogenase	NA|159aa|down_6|NZ_CP023690.1_2168573_2169050_-	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|322aa|down_7|NZ_CP023690.1_2169048_2170014_+	PRK06196, PRK06196, oxidoreductase; Provisional	NA|516aa|down_8|NZ_CP023690.1_2170036_2171584_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|330aa|down_9|NZ_CP023690.1_2171849_2172839_+	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	2	3332373-3332711	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas6e,cas5,cas7,cse2gr11,cas8e	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Type I-E	GTGGTCCCCGCGCGTGCGGGGGTGGTCCC,GTGGTCCCCGCGCGTGCGGGGGTGGTCCC,GTGGTCCCCGCGCGTGCGGGGGTGGTCCC	29,29,29	0	0	NA	NA	NA:NA:NA	4,5,5	5	TypeI-E	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA|97aa|up_3|NZ_CP023690.1_3326241_3326532_-,NA|169aa|up_1|NZ_CP023690.1_3330429_3330936_+,NA|60aa|down_8|NZ_CP023690.1_3341774_3341954_-	NA|92aa|up_9|NZ_CP023690.1_3319797_3320073_-	COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|224aa|up_8|NZ_CP023690.1_3320087_3320759_-	pfam01596, Methyltransf_3, O-methyltransferase	NA|287aa|up_7|NZ_CP023690.1_3320758_3321619_-	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]	NA|328aa|up_6|NZ_CP023690.1_3322348_3323332_-	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins	NA|205aa|up_5|NZ_CP023690.1_3323867_3324482_-	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|487aa|up_4|NZ_CP023690.1_3324781_3326242_-	cd06228, M14-like, Peptidase M14-like domain; uncharacterized subfamily	NA|97aa|up_3|NZ_CP023690.1_3326241_3326532_-	NA	NA|1074aa|up_2|NZ_CP023690.1_3327131_3330353_+	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|169aa|up_1|NZ_CP023690.1_3330429_3330936_+	NA	NA|66aa|up_0|NZ_CP023690.1_3331633_3331831_+	TIGR02072, Malonyl-_O-methyltransferase, malonyl-acyl carrier protein O-methyltransferase BioC	NA|436aa|down_0|NZ_CP023690.1_3332797_3334105_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|147aa|down_1|NZ_CP023690.1_3334297_3334738_+	COG4278, COG4278, Uncharacterized conserved protein [Function unknown]	NA|227aa|down_2|NZ_CP023690.1_3334895_3335576_+	pfam13649, Methyltransf_25, Methyltransferase domain	cas6e|243aa|down_3|NZ_CP023690.1_3336063_3336792_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|283aa|down_4|NZ_CP023690.1_3336773_3337622_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|452aa|down_5|NZ_CP023690.1_3337618_3338974_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|188aa|down_6|NZ_CP023690.1_3338970_3339534_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|545aa|down_7|NZ_CP023690.1_3339542_3341177_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	NA|60aa|down_8|NZ_CP023690.1_3341774_3341954_-	NA	NA|1145aa|down_9|NZ_CP023690.1_3342103_3345538_+	pfam13191, AAA_16, AAA ATPase domain
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	3	3354954-3355038	3	CRISPRCasFinder	no	cas6e,cas5,cas7,cse2gr11,cas8e	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Type I-E	CATGACGAGATTGGTGAGATTGG	23	0	0	NA	NA	NA	1	1	TypeI-E	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA|86aa|up_7|NZ_CP023690.1_3350324_3350582_+,NA|150aa|up_6|NZ_CP023690.1_3350578_3351028_+,NA|156aa|up_5|NZ_CP023690.1_3351024_3351492_+,NA|56aa|up_4|NZ_CP023690.1_3351488_3351656_+,NA|65aa|up_3|NZ_CP023690.1_3351652_3351847_+,NA|241aa|up_2|NZ_CP023690.1_3351843_3352566_+,NA|93aa|up_1|NZ_CP023690.1_3352562_3352841_+,NA|72aa|down_0|NZ_CP023690.1_3355605_3355821_+,NA|130aa|down_1|NZ_CP023690.1_3355817_3356207_+,NA|208aa|down_3|NZ_CP023690.1_3356826_3357450_+,NA|81aa|down_4|NZ_CP023690.1_3357491_3357734_+,NA|54aa|down_5|NZ_CP023690.1_3357830_3357992_+,NA|59aa|down_6|NZ_CP023690.1_3358012_3358189_+,NA|243aa|down_7|NZ_CP023690.1_3358185_3358914_+,NA|82aa|down_8|NZ_CP023690.1_3358913_3359159_+,NA|370aa|down_9|NZ_CP023690.1_3359155_3360265_+	NA|81aa|up_9|NZ_CP023690.1_3349753_3349996_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|105aa|up_8|NZ_CP023690.1_3349992_3350307_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|86aa|up_7|NZ_CP023690.1_3350324_3350582_+	NA	NA|150aa|up_6|NZ_CP023690.1_3350578_3351028_+	NA	NA|156aa|up_5|NZ_CP023690.1_3351024_3351492_+	NA	NA|56aa|up_4|NZ_CP023690.1_3351488_3351656_+	NA	NA|65aa|up_3|NZ_CP023690.1_3351652_3351847_+	NA	NA|241aa|up_2|NZ_CP023690.1_3351843_3352566_+	NA	NA|93aa|up_1|NZ_CP023690.1_3352562_3352841_+	NA	NA|287aa|up_0|NZ_CP023690.1_3352931_3353792_+	PRK07078, PRK07078, hypothetical protein; Validated	NA|72aa|down_0|NZ_CP023690.1_3355605_3355821_+	NA	NA|130aa|down_1|NZ_CP023690.1_3355817_3356207_+	NA	NA|164aa|down_2|NZ_CP023690.1_3356307_3356799_+	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional	NA|208aa|down_3|NZ_CP023690.1_3356826_3357450_+	NA	NA|81aa|down_4|NZ_CP023690.1_3357491_3357734_+	NA	NA|54aa|down_5|NZ_CP023690.1_3357830_3357992_+	NA	NA|59aa|down_6|NZ_CP023690.1_3358012_3358189_+	NA	NA|243aa|down_7|NZ_CP023690.1_3358185_3358914_+	NA	NA|82aa|down_8|NZ_CP023690.1_3358913_3359159_+	NA	NA|370aa|down_9|NZ_CP023690.1_3359155_3360265_+	NA
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	4	3690251-3690352	4	CRISPRCasFinder	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	CCGGCCGCGCCCCGACCTGGCGGCT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA|364aa|up_6|NZ_CP023690.1_3683105_3684197_+,NA|242aa|down_2|NZ_CP023690.1_3695665_3696391_-	NA|214aa|up_9|NZ_CP023690.1_3678241_3678883_-	pfam01323, DSBA, DSBA-like thioredoxin domain	NA|859aa|up_8|NZ_CP023690.1_3679030_3681607_+	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type	NA|359aa|up_7|NZ_CP023690.1_3681695_3682772_-	pfam00089, Trypsin, Trypsin	NA|364aa|up_6|NZ_CP023690.1_3683105_3684197_+	NA	NA|395aa|up_5|NZ_CP023690.1_3684287_3685472_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|585aa|up_4|NZ_CP023690.1_3685593_3687348_-	TIGR03767, P_acnes_RR, metallophosphoesterase, PPA1498 family	NA|185aa|up_3|NZ_CP023690.1_3687597_3688152_-	pfam11706, zf-CGNR, CGNR zinc finger	NA|152aa|up_2|NZ_CP023690.1_3688309_3688765_+	cd06587, VOC, vicinal oxygen chelate (VOC) family	NA|296aa|up_1|NZ_CP023690.1_3688779_3689667_+	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family	NA|149aa|up_0|NZ_CP023690.1_3689723_3690170_+	cd04684, Nudix_Hydrolase_25, Contains a crystal structure of the Nudix hydrolase from Enterococcus faecalis, which has an unknown function	NA|1098aa|down_0|NZ_CP023690.1_3690628_3693922_+	cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8 family domain in Tripeptidyl aminopeptidases_II	NA|499aa|down_1|NZ_CP023690.1_3694009_3695506_-	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins	NA|242aa|down_2|NZ_CP023690.1_3695665_3696391_-	NA	NA|182aa|down_3|NZ_CP023690.1_3696489_3697035_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|337aa|down_4|NZ_CP023690.1_3699450_3700461_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|170aa|down_5|NZ_CP023690.1_3700577_3701087_+	pfam06718, DUF1203, Protein of unknown function (DUF1203)	NA|295aa|down_6|NZ_CP023690.1_3701100_3701985_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|403aa|down_7|NZ_CP023690.1_3702098_3703307_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|146aa|down_8|NZ_CP023690.1_3703303_3703741_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|284aa|down_9|NZ_CP023690.1_3703975_3704827_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	5	4213302-4213408	5	CRISPRCasFinder	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	GCCCCGACCTAGCGGCTTGCACGCCGTCG	29	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA|143aa|up_0|NZ_CP023690.1_4212809_4213238_+,NA|268aa|down_3|NZ_CP023690.1_4218116_4218920_+,NA|104aa|down_4|NZ_CP023690.1_4218957_4219269_-	NA|318aa|up_9|NZ_CP023690.1_4200710_4201664_+	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	NA|454aa|up_8|NZ_CP023690.1_4201757_4203119_-	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|463aa|up_7|NZ_CP023690.1_4203224_4204613_-	cd06836, PLPDE_III_ODC_DapDC_like_1, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Uncharacterized Proteins with similarity to Ornithine and Diaminopimelate Decarboxylases	NA|553aa|up_6|NZ_CP023690.1_4204730_4206389_+	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|401aa|up_5|NZ_CP023690.1_4206451_4207654_+	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed	NA|450aa|up_4|NZ_CP023690.1_4207650_4209000_+	PRK09229, PRK09229, N-formimino-L-glutamate deiminase; Validated	NA|390aa|up_3|NZ_CP023690.1_4209236_4210406_+	PRK14085, PRK14085, imidazolonepropionase; Provisional	NA|278aa|up_2|NZ_CP023690.1_4210417_4211251_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|467aa|up_1|NZ_CP023690.1_4211367_4212768_+	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|143aa|up_0|NZ_CP023690.1_4212809_4213238_+	NA	NA|464aa|down_0|NZ_CP023690.1_4213730_4215122_-	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|333aa|down_1|NZ_CP023690.1_4215356_4216355_+	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|407aa|down_2|NZ_CP023690.1_4216617_4217838_+	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|268aa|down_3|NZ_CP023690.1_4218116_4218920_+	NA	NA|104aa|down_4|NZ_CP023690.1_4218957_4219269_-	NA	NA|77aa|down_5|NZ_CP023690.1_4219370_4219601_+	pfam14117, DUF4287, Domain of unknown function (DUF4287)	NA|305aa|down_6|NZ_CP023690.1_4219754_4220669_-	pfam12811, BaxI_1, Bax inhibitor 1 like	NA|395aa|down_7|NZ_CP023690.1_4220873_4222058_-	PRK08243, PRK08243, 4-hydroxybenzoate 3-monooxygenase; Validated	NA|274aa|down_8|NZ_CP023690.1_4222718_4223540_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|840aa|down_9|NZ_CP023690.1_4223698_4226218_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	6	5114206-5114314	6	CRISPRCasFinder	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	GTGCCGGTGGTGCCCTCGCAGGCTTT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA|277aa|up_8|NZ_CP023690.1_5104574_5105405_-,NA|126aa|up_5|NZ_CP023690.1_5107637_5108015_+,NA|149aa|up_2|NZ_CP023690.1_5110400_5110847_-,NA	NA|339aa|up_9|NZ_CP023690.1_5103500_5104517_-	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|277aa|up_8|NZ_CP023690.1_5104574_5105405_-	NA	NA|282aa|up_7|NZ_CP023690.1_5105525_5106371_-	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|357aa|up_6|NZ_CP023690.1_5106367_5107438_-	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit	NA|126aa|up_5|NZ_CP023690.1_5107637_5108015_+	NA	NA|421aa|up_4|NZ_CP023690.1_5108024_5109287_-	cd01830, XynE_like, SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE	NA|303aa|up_3|NZ_CP023690.1_5109485_5110394_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|149aa|up_2|NZ_CP023690.1_5110400_5110847_-	NA	NA|248aa|up_1|NZ_CP023690.1_5110913_5111657_-	pfam02909, TetR_C, Tetracyclin repressor, C-terminal all-alpha domain	NA|522aa|up_0|NZ_CP023690.1_5111792_5113358_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|108aa|down_0|NZ_CP023690.1_5114884_5115208_+	pfam04993, TfoX_N, TfoX N-terminal domain	NA|159aa|down_1|NZ_CP023690.1_5115242_5115719_+	cd04684, Nudix_Hydrolase_25, Contains a crystal structure of the Nudix hydrolase from Enterococcus faecalis, which has an unknown function	NA|137aa|down_2|NZ_CP023690.1_5115803_5116214_+	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|279aa|down_3|NZ_CP023690.1_5116541_5117378_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|157aa|down_4|NZ_CP023690.1_5117310_5117781_-	cd06121, cupin_YML079wp, Saccharomyces cerevisiae YML079wp and related proteins, cupin domain	NA|132aa|down_5|NZ_CP023690.1_5117770_5118166_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|312aa|down_6|NZ_CP023690.1_5118215_5119151_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|87aa|down_7|NZ_CP023690.1_5119113_5119374_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|198aa|down_8|NZ_CP023690.1_5119498_5120092_+	pfam14124, DUF4291, Domain of unknown function (DUF4291)	NA|228aa|down_9|NZ_CP023690.1_5120178_5120862_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	7	5543678-5544438	2,7,2	CRT,CRISPRCasFinder,PILER-CR	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	GGGACCACCCCCGCACGCGCGGGGACCAC,GGGACCACCCCCGCACGCGCGGGGACCAC,GTGGTCCCCGCGCGTGCGGGGGTGGTCCC	29,29,29	0	0	NA	NA	NA:NA:NA	12,11,9	12	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA,NA|85aa|down_9|NZ_CP023690.1_5556934_5557189_-	NA|109aa|up_9|NZ_CP023690.1_5534707_5535034_+	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|307aa|up_8|NZ_CP023690.1_5535040_5535961_-	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]	NA|101aa|up_7|NZ_CP023690.1_5536078_5536381_-	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal	NA|484aa|up_6|NZ_CP023690.1_5536469_5537921_+	TIGR03701, mena_SCO4490, menaquinone biosynthesis decarboxylase, SCO4490 family	NA|301aa|up_5|NZ_CP023690.1_5537917_5538820_+	PRK12888, ubiA, 4-hydroxybenzoate octaprenyltransferase	NA|238aa|up_4|NZ_CP023690.1_5538816_5539530_+	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism]	NA|152aa|up_3|NZ_CP023690.1_5539811_5540267_+	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|388aa|up_2|NZ_CP023690.1_5540320_5541484_+	TIGR03700, mena_SCO4494, putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family	NA|97aa|up_1|NZ_CP023690.1_5541590_5541881_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|444aa|up_0|NZ_CP023690.1_5542272_5543604_+	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]	NA|306aa|down_0|NZ_CP023690.1_5544800_5545718_+	pfam01636, APH, Phosphotransferase enzyme family	NA|149aa|down_1|NZ_CP023690.1_5548319_5548766_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|206aa|down_2|NZ_CP023690.1_5549013_5549631_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|283aa|down_3|NZ_CP023690.1_5549616_5550465_-	pfam01575, MaoC_dehydratas, MaoC like domain	NA|438aa|down_4|NZ_CP023690.1_5550527_5551841_-	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|527aa|down_5|NZ_CP023690.1_5552123_5553704_+	pfam08386, Abhydrolase_4, TAP-like protein	NA|290aa|down_6|NZ_CP023690.1_5553717_5554587_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|466aa|down_7|NZ_CP023690.1_5554853_5556251_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|164aa|down_8|NZ_CP023690.1_5556264_5556756_-	cd02215, cupin_QDO_N_C, quercetinase, N- and C-terminal cupin domains	NA|85aa|down_9|NZ_CP023690.1_5556934_5557189_-	NA
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	8	5545814-5546505	3,8,3,4	CRT,CRISPRCasFinder,PILER-CR,PILER-CR	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	CCCCGCACGCGCGGGGACCAC,GGGACCACCCCCGCACGCGCGGGGACCAC,GGGTGGTCCCCGCGCGTGCGGGGGTGGTCCCGT,GTGGTCCCCGCGCGTGCGGGGATGGTCCC	21,29,33,29	0	0	NA	NA	NA:NA:NA:I-C,I-E,II-B	11,10,6,6	11	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA,NA|85aa|down_8|NZ_CP023690.1_5556934_5557189_-,NA|83aa|down_9|NZ_CP023690.1_5557175_5557424_-	NA|307aa|up_9|NZ_CP023690.1_5535040_5535961_-	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]	NA|101aa|up_8|NZ_CP023690.1_5536078_5536381_-	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal	NA|484aa|up_7|NZ_CP023690.1_5536469_5537921_+	TIGR03701, mena_SCO4490, menaquinone biosynthesis decarboxylase, SCO4490 family	NA|301aa|up_6|NZ_CP023690.1_5537917_5538820_+	PRK12888, ubiA, 4-hydroxybenzoate octaprenyltransferase	NA|238aa|up_5|NZ_CP023690.1_5538816_5539530_+	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism]	NA|152aa|up_4|NZ_CP023690.1_5539811_5540267_+	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|388aa|up_3|NZ_CP023690.1_5540320_5541484_+	TIGR03700, mena_SCO4494, putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family	NA|97aa|up_2|NZ_CP023690.1_5541590_5541881_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|444aa|up_1|NZ_CP023690.1_5542272_5543604_+	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]	NA|306aa|up_0|NZ_CP023690.1_5544800_5545718_+	pfam01636, APH, Phosphotransferase enzyme family	NA|149aa|down_0|NZ_CP023690.1_5548319_5548766_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|206aa|down_1|NZ_CP023690.1_5549013_5549631_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|283aa|down_2|NZ_CP023690.1_5549616_5550465_-	pfam01575, MaoC_dehydratas, MaoC like domain	NA|438aa|down_3|NZ_CP023690.1_5550527_5551841_-	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|527aa|down_4|NZ_CP023690.1_5552123_5553704_+	pfam08386, Abhydrolase_4, TAP-like protein	NA|290aa|down_5|NZ_CP023690.1_5553717_5554587_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|466aa|down_6|NZ_CP023690.1_5554853_5556251_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|164aa|down_7|NZ_CP023690.1_5556264_5556756_-	cd02215, cupin_QDO_N_C, quercetinase, N- and C-terminal cupin domains	NA|85aa|down_8|NZ_CP023690.1_5556934_5557189_-	NA	NA|83aa|down_9|NZ_CP023690.1_5557175_5557424_-	NA
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	9	5844414-5844579	9	CRISPRCasFinder	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	CGGTGCGGGGTTGGTCCCACCCTCCGCCCCCACCCGGCTCTGCGTCGGGCCCGG	54	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA,NA|628aa|down_1|NZ_CP023690.1_5846303_5848187_+,NA|132aa|down_2|NZ_CP023690.1_5848183_5848579_+,NA|262aa|down_3|NZ_CP023690.1_5848582_5849368_+,NA|124aa|down_6|NZ_CP023690.1_5851938_5852310_+,NA|180aa|down_9|NZ_CP023690.1_5853473_5854013_+	NA|532aa|up_9|NZ_CP023690.1_5832848_5834444_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|212aa|up_8|NZ_CP023690.1_5834514_5835150_-	pfam06271, RDD, RDD family	NA|286aa|up_7|NZ_CP023690.1_5835398_5836256_+	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|161aa|up_6|NZ_CP023690.1_5836272_5836755_+	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|387aa|up_5|NZ_CP023690.1_5837188_5838349_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|231aa|up_4|NZ_CP023690.1_5838345_5839038_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|117aa|up_3|NZ_CP023690.1_5839126_5839477_-	pfam01356, A_amylase_inhib, Alpha amylase inhibitor	NA|263aa|up_2|NZ_CP023690.1_5839772_5840561_+	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|312aa|up_1|NZ_CP023690.1_5840557_5841493_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|426aa|up_0|NZ_CP023690.1_5842727_5844005_+	pfam10901, DUF2690, Protein of unknown function (DUF2690)	NA|330aa|down_0|NZ_CP023690.1_5845124_5846114_+	PRK05442, PRK05442, malate dehydrogenase; Provisional	NA|628aa|down_1|NZ_CP023690.1_5846303_5848187_+	NA	NA|132aa|down_2|NZ_CP023690.1_5848183_5848579_+	NA	NA|262aa|down_3|NZ_CP023690.1_5848582_5849368_+	NA	NA|468aa|down_4|NZ_CP023690.1_5849388_5850792_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|325aa|down_5|NZ_CP023690.1_5850890_5851865_+	cd08460, PBP2_DntR_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold	NA|124aa|down_6|NZ_CP023690.1_5851938_5852310_+	NA	NA|169aa|down_7|NZ_CP023690.1_5852368_5852875_-	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|82aa|down_8|NZ_CP023690.1_5853224_5853470_+	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|180aa|down_9|NZ_CP023690.1_5853473_5854013_+	NA
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	10	6149437-6149543	10	CRISPRCasFinder	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	GTCCTCAAACGCCGGACGGGCTGGAT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA|278aa|up_1|NZ_CP023690.1_6147977_6148811_-,NA|109aa|up_0|NZ_CP023690.1_6148866_6149193_-,NA	NA|147aa|up_9|NZ_CP023690.1_6136327_6136768_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|861aa|up_8|NZ_CP023690.1_6137429_6140012_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|238aa|up_7|NZ_CP023690.1_6140041_6140755_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|675aa|up_6|NZ_CP023690.1_6140855_6142880_-	pfam04536, TPM_phosphatase, TPM domain	NA|225aa|up_5|NZ_CP023690.1_6143125_6143800_+	pfam14568, SUKH_6, SMI1-KNR4 cell-wall	NA|418aa|up_4|NZ_CP023690.1_6143819_6145073_-	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|263aa|up_3|NZ_CP023690.1_6145214_6146003_-	PRK12386, PRK12386, fumarate reductase iron-sulfur subunit; Provisional	NA|643aa|up_2|NZ_CP023690.1_6145999_6147928_-	PRK07803, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|278aa|up_1|NZ_CP023690.1_6147977_6148811_-	NA	NA|109aa|up_0|NZ_CP023690.1_6148866_6149193_-	NA	NA|784aa|down_0|NZ_CP023690.1_6149788_6152140_+	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold	NA|636aa|down_1|NZ_CP023690.1_6152283_6154191_+	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA	NA|544aa|down_2|NZ_CP023690.1_6154700_6156332_+	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|309aa|down_3|NZ_CP023690.1_6156412_6157339_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|321aa|down_4|NZ_CP023690.1_6157331_6158294_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|351aa|down_5|NZ_CP023690.1_6158305_6159358_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|385aa|down_6|NZ_CP023690.1_6159350_6160505_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|541aa|down_7|NZ_CP023690.1_6160971_6162594_+	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|308aa|down_8|NZ_CP023690.1_6162664_6163588_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|323aa|down_9|NZ_CP023690.1_6163580_6164549_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCF_008704795.1_ASM870479v1	NZ_CP023690	Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome	11	8036207-8036304	11	CRISPRCasFinder	no		csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	Orphan	TCTCGGCTCCGCTCGAGCAGGGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,Cas9_archaeal,casR,DEDDh,WYL,cas4,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,DinG	NA|422aa|up_7|NZ_CP023690.1_8027671_8028937_+,NA|122aa|up_1|NZ_CP023690.1_8034833_8035199_-,NA	NA|294aa|up_9|NZ_CP023690.1_8025682_8026564_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|178aa|up_8|NZ_CP023690.1_8027108_8027642_+	cd13632, PBP2_Aa-PDT_like, Catalytic domain of prephenate dehydratase from Arthrobacter aurescens and similar proteins, subgroup 3; the type 2 periplasmic binding protein fold	NA|422aa|up_7|NZ_CP023690.1_8027671_8028937_+	NA	NA|145aa|up_6|NZ_CP023690.1_8028972_8029407_+	pfam12680, SnoaL_2, SnoaL-like domain	NA|313aa|up_5|NZ_CP023690.1_8029403_8030342_+	PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated	NA|210aa|up_4|NZ_CP023690.1_8030491_8031121_+	pfam03591, AzlC, AzlC protein	NA|106aa|up_3|NZ_CP023690.1_8031117_8031435_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|1096aa|up_2|NZ_CP023690.1_8031463_8034751_-	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain	NA|122aa|up_1|NZ_CP023690.1_8034833_8035199_-	NA	NA|142aa|up_0|NZ_CP023690.1_8035279_8035705_-	pfam12680, SnoaL_2, SnoaL-like domain	NA|181aa|down_0|NZ_CP023690.1_8036411_8036954_+	pfam08768, DUF1794, Domain of unknown function (DUF1794)	NA|162aa|down_1|NZ_CP023690.1_8037317_8037803_+	pfam09056, Phospholip_A2_3, Prokaryotic phospholipase A2	NA|275aa|down_2|NZ_CP023690.1_8037989_8038814_+	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms	NA|144aa|down_3|NZ_CP023690.1_8038847_8039279_-	cd08357, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) familyprotein, glyoxalase I, and type I ring-cleaving dioxygenases	NA|341aa|down_4|NZ_CP023690.1_8039451_8040474_+	TIGR01840, poly3-hydroxybutyrate_depolymerase_A_precursor, esterase, PHB depolymerase family	NA|266aa|down_5|NZ_CP023690.1_8040585_8041383_+	TIGR01963, D-beta-hydroxybutyrate_dehydrogenase, 3-hydroxybutyrate dehydrogenase	NA|479aa|down_6|NZ_CP023690.1_8041453_8042890_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|648aa|down_7|NZ_CP023690.1_8042946_8044890_+	smart00065, GAF, Domain present in phytochromes and cGMP-specific phosphodiesterases	NA|672aa|down_8|NZ_CP023690.1_8044849_8046865_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|353aa|down_9|NZ_CP023690.1_8047123_8048182_-	cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family
