assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008727455.1_ASM872745v1	NZ_CP044171	Campylobacter jejuni strain AR-0413 chromosome, complete genome	1	284397-284476	1	CRISPRCasFinder	no		cas2,cas1,csa3,DEDDh,WYL	Orphan	TCTTTTTGTTCTTTTAAAGCTTC	23	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,csa3,DEDDh,WYL	NA,NA|140aa|down_3|NZ_CP044171.1_287155_287575_-,NA|374aa|down_5|NZ_CP044171.1_288929_290051_-,NA|77aa|down_8|NZ_CP044171.1_292434_292665_-,NA|164aa|down_9|NZ_CP044171.1_292622_293114_-	NA|447aa|up_9|NZ_CP044171.1_274686_276027_+	pfam03972, MmgE_PrpD, MmgE/PrpD family	NA|75aa|up_8|NZ_CP044171.1_276108_276333_+	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism]	NA|614aa|up_7|NZ_CP044171.1_276329_278171_+	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|498aa|up_6|NZ_CP044171.1_278167_279661_-	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion]	NA|275aa|up_5|NZ_CP044171.1_279664_280489_-	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI	NA|224aa|up_4|NZ_CP044171.1_280492_281164_-	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|401aa|up_3|NZ_CP044171.1_281160_282363_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|333aa|up_2|NZ_CP044171.1_282365_283364_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|182aa|up_1|NZ_CP044171.1_283423_283969_+	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]	NA|109aa|up_0|NZ_CP044171.1_283996_284323_+	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|457aa|down_0|NZ_CP044171.1_284778_286149_-	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e	NA|179aa|down_1|NZ_CP044171.1_286271_286808_+	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed	NA|116aa|down_2|NZ_CP044171.1_286807_287155_+	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism]	NA|140aa|down_3|NZ_CP044171.1_287155_287575_-	NA	NA|454aa|down_4|NZ_CP044171.1_287571_288933_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|374aa|down_5|NZ_CP044171.1_288929_290051_-	NA	NA|395aa|down_6|NZ_CP044171.1_290123_291308_-	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]	NA|372aa|down_7|NZ_CP044171.1_291304_292420_-	COG3563, KpsC, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]	NA|77aa|down_8|NZ_CP044171.1_292434_292665_-	NA	NA|164aa|down_9|NZ_CP044171.1_292622_293114_-	NA
GCF_008727455.1_ASM872745v1	NZ_CP044171	Campylobacter jejuni strain AR-0413 chromosome, complete genome	2	386279-386578	1,1,2	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1	cas2,cas1,csa3,DEDDh,WYL	Unclear	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT,GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT,TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	36,36,35	0	0	NA	NA	NA:NA:NA	4,4,4	4	Unclear	cas2,cas1,csa3,DEDDh,WYL	NA,NA	NA|311aa|up_9|NZ_CP044171.1_375929_376862_-	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit	NA|214aa|up_8|NZ_CP044171.1_376858_377500_-	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|935aa|up_7|NZ_CP044171.1_377496_380301_-	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|64aa|up_6|NZ_CP044171.1_380300_380492_-	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|238aa|up_5|NZ_CP044171.1_380466_381180_-	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only]	NA|383aa|up_4|NZ_CP044171.1_381483_382632_-	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase	NA|514aa|up_3|NZ_CP044171.1_382757_384299_+	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|74aa|up_2|NZ_CP044171.1_384300_384522_+	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|149aa|up_1|NZ_CP044171.1_384522_384969_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|397aa|up_0|NZ_CP044171.1_384972_386163_+	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism]	cas2|144aa|down_0|NZ_CP044171.1_386723_387155_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|297aa|down_1|NZ_CP044171.1_387147_388038_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	NA|486aa|down_2|NZ_CP044171.1_391195_392653_+	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion]	NA|326aa|down_3|NZ_CP044171.1_392677_393655_-	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins	NA|330aa|down_4|NZ_CP044171.1_393714_394704_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|202aa|down_5|NZ_CP044171.1_394764_395370_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|250aa|down_6|NZ_CP044171.1_395366_396116_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|245aa|down_7|NZ_CP044171.1_396090_396825_+	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only]	NA|346aa|down_8|NZ_CP044171.1_396821_397859_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|150aa|down_9|NZ_CP044171.1_397925_398375_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]
GCF_008727455.1_ASM872745v1	NZ_CP044170	Campylobacter jejuni strain AR-0413 plasmid pAR-0413-1, complete sequence	1	18983-19173	1	PILER-CR	no			Orphan	ATTGACATAAATAGAATAGTTT	22	0	0	NA	NA	NA	2	2	Orphan	cas2,cas1,csa3,DEDDh,WYL	NA|108aa|up_7|NZ_CP044170.1_10508_10832_+,NA|70aa|down_1|NZ_CP044170.1_20833_21043_+,NA|88aa|down_2|NZ_CP044170.1_21202_21466_-,NA|220aa|down_4|NZ_CP044170.1_22894_23554_-,NA|204aa|down_5|NZ_CP044170.1_23557_24169_-,NA|94aa|down_6|NZ_CP044170.1_24197_24479_-,NA|184aa|down_7|NZ_CP044170.1_24672_25224_+,NA|285aa|down_9|NZ_CP044170.1_26707_27562_+	NA|923aa|up_9|NZ_CP044170.1_7289_10058_-	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|88aa|up_8|NZ_CP044170.1_10076_10340_-	pfam04956, TrbC, TrbC/VIRB2 family	NA|108aa|up_7|NZ_CP044170.1_10508_10832_+	NA	NA|126aa|up_6|NZ_CP044170.1_10822_11200_+	COG3309, VapD, Uncharacterized virulence-associated protein D [Function unknown]	NA|205aa|up_5|NZ_CP044170.1_11196_11811_+	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase	NA|737aa|up_4|NZ_CP044170.1_12063_14274_+	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	NA|355aa|up_3|NZ_CP044170.1_14215_15280_+	cd17586, REC_PFxFATGY, phosphoacceptor receiver (REC) domain of PFxFATGY motif single-domain (stand-alone) response regulators	NA|419aa|up_2|NZ_CP044170.1_15272_16529_-	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|598aa|up_1|NZ_CP044170.1_16680_18474_-	pfam13481, AAA_25, AAA domain	NA|73aa|up_0|NZ_CP044170.1_18564_18783_-	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|391aa|down_0|NZ_CP044170.1_19511_20684_+	cd00180, PKc, Catalytic domain of Protein Kinases	NA|70aa|down_1|NZ_CP044170.1_20833_21043_+	NA	NA|88aa|down_2|NZ_CP044170.1_21202_21466_-	NA	NA|411aa|down_3|NZ_CP044170.1_21580_22813_-	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown]	NA|220aa|down_4|NZ_CP044170.1_22894_23554_-	NA	NA|204aa|down_5|NZ_CP044170.1_23557_24169_-	NA	NA|94aa|down_6|NZ_CP044170.1_24197_24479_-	NA	NA|184aa|down_7|NZ_CP044170.1_24672_25224_+	NA	NA|463aa|down_8|NZ_CP044170.1_25223_26612_+	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|285aa|down_9|NZ_CP044170.1_26707_27562_+	NA
GCF_008727455.1_ASM872745v1	NZ_CP044170	Campylobacter jejuni strain AR-0413 plasmid pAR-0413-1, complete sequence	2	42571-42710	1	CRISPRCasFinder	no			Orphan	CACCTCACTCCCTCTCGCCTTGACCGCTAATCTTATCAAT	40	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,csa3,DEDDh,WYL	NA|235aa|up_9|NZ_CP044170.1_31721_32426_+,NA|89aa|up_7|NZ_CP044170.1_38292_38559_-,NA|89aa|up_5|NZ_CP044170.1_39180_39447_-,NA|186aa|up_4|NZ_CP044170.1_39451_40009_-,NA|171aa|up_3|NZ_CP044170.1_40005_40518_-,NA|118aa|up_2|NZ_CP044170.1_40514_40868_-,NA|78aa|up_1|NZ_CP044170.1_40827_41061_-,NA|141aa|down_0|NZ_CP044170.1_42753_43176_-,NA|101aa|down_1|NZ_CP044170.1_43214_43517_-,NA|55aa|down_4|NZ_CP044170.1_45591_45756_+,NA|109aa|down_5|NZ_CP044170.1_45752_46079_+,NA|62aa|down_8|NZ_CP044170.1_49106_49292_+	NA|235aa|up_9|NZ_CP044170.1_31721_32426_+	NA	NA|1933aa|up_8|NZ_CP044170.1_32447_38246_-	COG4646, COG4646, DNA methylase [Transcription / DNA replication, recombination, and repair]	NA|89aa|up_7|NZ_CP044170.1_38292_38559_-	NA	NA|187aa|up_6|NZ_CP044170.1_38561_39122_-	cd02042, ParAB_family, partition proteins ParAB family	NA|89aa|up_5|NZ_CP044170.1_39180_39447_-	NA	NA|186aa|up_4|NZ_CP044170.1_39451_40009_-	NA	NA|171aa|up_3|NZ_CP044170.1_40005_40518_-	NA	NA|118aa|up_2|NZ_CP044170.1_40514_40868_-	NA	NA|78aa|up_1|NZ_CP044170.1_40827_41061_-	NA	NA|63aa|up_0|NZ_CP044170.1_41050_41239_-	COG1241, MCM2, Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair]	NA|141aa|down_0|NZ_CP044170.1_42753_43176_-	NA	NA|101aa|down_1|NZ_CP044170.1_43214_43517_-	NA	NA|213aa|down_2|NZ_CP044170.1_43470_44109_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|58aa|down_3|NZ_CP044170.1_44312_44486_-	pfam14205, Cys_rich_KTR, Cysteine-rich KTR	NA|55aa|down_4|NZ_CP044170.1_45591_45756_+	NA	NA|109aa|down_5|NZ_CP044170.1_45752_46079_+	NA	NA|289aa|down_6|NZ_CP044170.1_46027_46894_-	pfam04439, Adenyl_transf, Streptomycin adenylyltransferase	NA|115aa|down_7|NZ_CP044170.1_48671_49016_-	COG5015, COG5015, Uncharacterized conserved protein [Function unknown]	NA|62aa|down_8|NZ_CP044170.1_49106_49292_+	NA	NA|265aa|down_9|NZ_CP044170.1_49399_50194_-	cd05150, APH, Aminoglycoside 3'-phosphotransferase
