The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	0	17016	1754049		Synechococcus_phage(28.57%)	12	NA	NA
WP_002781106.1|168_588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052798570.1|571_856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002781103.1|891_3642_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002781102.1|3638_5237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002781101.1|5239_8296_+	putative sugar transferase	NA	NA	NA	NA	NA
WP_002781100.1|8295_8853_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A1D7XFA9	Escherichia_phage	33.3	1.0e-15
WP_002781092.1|8857_9952_+	GDP-L-fucose synthase	NA	M1HWW2	Paramecium_bursaria_Chlorella_virus	43.6	1.3e-75
WP_002781088.1|11076_12108_+	GDP-mannose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	73.0	3.2e-145
WP_002781080.1|12104_13124_+	D-glycero-D-manno-heptose 7-phosphate kinase	NA	A0A222YW25	Synechococcus_phage	39.9	2.3e-58
WP_002781078.1|13111_13717_+	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	34.8	7.0e-15
WP_002781076.1|13704_14397_+	NTP transferase domain-containing protein	NA	A0A2K9L821	Tupanvirus	26.6	7.3e-08
WP_002780431.1|16005_17016_+	glycosyltransferase	NA	A0A0N9QZQ5	Chrysochromulina_ericina_virus	29.9	1.5e-30
>prophage 2
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	21408	25555	1754049		Orpheovirus(50.0%)	5	NA	NA
WP_002780438.1|21408_22770_+	cytochrome P450	NA	A0A2I2L481	Orpheovirus	24.6	1.7e-32
WP_002780440.1|22766_23186_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002780441.1|23186_23534_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_002780442.1|23533_24070_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_072215552.1|24172_25555_+	phosphoglucosamine mutase PgmL	NA	A0A127AWJ1	Bacillus_phage	34.4	3.9e-53
>prophage 3
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	30018	30843	1754049		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_002780456.1|30018_30843_+	enoyl-ACP reductase FabI	NA	F2NZ40	Diadromus_pulchellus_ascovirus	24.6	1.4e-05
>prophage 4
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	35829	37197	1754049		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_151061208.1|35829_37197_-	adenylosuccinate lyase	NA	A0A1B1ISB0	uncultured_Mediterranean_phage	23.3	1.1e-07
>prophage 5
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	41648	43073	1754049		Tupanvirus(100.0%)	1	NA	NA
WP_002783865.1|41648_43073_-	catalase	NA	A0A2K9L0T1	Tupanvirus	38.2	1.2e-92
>prophage 6
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	48662	50462	1754049		Aureococcus_anophage(100.0%)	1	NA	NA
WP_002780478.1|48662_50462_+	selenocysteine-specific translation elongation factor	NA	A0A076FFS6	Aureococcus_anophage	23.7	8.2e-11
>prophage 7
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	53613	54222	1754049		Cassava_brown_streak_virus(100.0%)	1	NA	NA
WP_002780486.1|53613_54222_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	A0A0N7HHA4	Cassava_brown_streak_virus	34.9	2.3e-10
>prophage 8
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	58495	59815	1754049		Moraxella_phage(100.0%)	1	NA	NA
WP_002780501.1|58495_59815_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	30.1	1.3e-53
>prophage 9
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	63384	65181	1754049		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002780511.1|63384_65181_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1I9J5	Paramecium_bursaria_Chlorella_virus	35.0	1.8e-90
>prophage 10
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	70855	71866	1754049		Dinoroseobacter_phage(100.0%)	1	NA	NA
WP_002777794.1|70855_71866_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A1V0DYC6	Dinoroseobacter_phage	30.9	2.0e-06
>prophage 11
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	75103	77482	1754049		Bacillus_virus(50.0%)	3	NA	NA
WP_002813312.1|75103_76021_+	ABC transporter substrate-binding protein	NA	G3M9Z0	Bacillus_virus	33.1	1.5e-05
WP_002813315.1|76017_76755_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002813317.1|76690_77482_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.1	5.9e-22
>prophage 12
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	87609	90262	1754049		Amsacta_moorei_entomopoxvirus(50.0%)	3	NA	NA
WP_151061212.1|87609_88365_-	ATP-binding cassette domain-containing protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	5.9e-19
WP_002780537.1|88361_89258_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_002780538.1|89293_90262_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	50.3	8.4e-79
>prophage 13
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	96864	97872	1754049	tRNA	Moraxella_phage(100.0%)	1	NA	NA
WP_072220008.1|96864_97872_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	37.7	1.4e-44
>prophage 14
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	118824	122010	1754049		Bacillus_virus(50.0%)	3	NA	NA
WP_002782240.1|118824_119850_-	CBS domain-containing protein	NA	G3MA50	Bacillus_virus	26.2	1.0e-10
WP_002782239.1|119858_121013_-	GDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA	NA
WP_002782237.1|121005_122010_-	N,N'-diacetyllegionaminate synthase	NA	A0A1B1IVE2	uncultured_Mediterranean_phage	35.4	4.1e-36
>prophage 15
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	126555	130480	1754049		Yellowstone_lake_phycodnavirus(50.0%)	3	NA	NA
WP_002802255.1|126555_127527_-	4,6-dehydratase LegB	NA	A0A0P0YMS6	Yellowstone_lake_phycodnavirus	29.8	3.3e-30
WP_151061231.1|127523_129452_-	motility associated factor glycosyltransferase family protein	NA	NA	NA	NA	NA
WP_057993490.1|129448_130480_-	pseudaminic acid synthase	NA	A0A1B1IVE2	uncultured_Mediterranean_phage	33.3	4.1e-31
>prophage 16
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	134462	139317	1754049		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_002777693.1|134462_135161_-	pseudaminic acid cytidylyltransferase	NA	A0A1B1IVD3	uncultured_Mediterranean_phage	28.2	1.4e-06
WP_072238482.1|135239_136454_+	DUF2920 family protein	NA	NA	NA	NA	NA
WP_002782100.1|136475_137546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002777686.1|137542_137770_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_002782097.1|137808_139317_-	amino acid adenylation domain-containing protein	NA	A0A2K9L3I8	Tupanvirus	29.4	9.2e-40
>prophage 17
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	148323	155315	1754049	tRNA	Stenotrophomonas_phage(25.0%)	7	NA	NA
WP_002777631.1|148323_149454_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	A0A2D2W2B8	Stenotrophomonas_phage	31.0	6.3e-17
WP_151061238.1|149455_150460_-	UDP-N-acetylglucosamine 4,6-dehydratase (inverting)	NA	A0A2P1ELS8	Moumouvirus	39.2	5.4e-44
WP_002782005.1|150509_151070_-	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	60.6	9.6e-59
WP_002777628.1|151227_151683_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_002777627.1|151684_153016_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_002777626.1|153043_153859_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002786096.1|153923_155315_+|tRNA	glutamate--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	27.1	3.4e-12
>prophage 18
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	160577	167017	1754049	tRNA	Staphylococcus_phage(25.0%)	7	NA	NA
WP_002777613.1|160577_161597_+	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	36.7	1.4e-60
WP_002777611.1|161613_162057_+	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	37.3	9.7e-14
WP_002777609.1|162134_163835_+	acetolactate synthase large subunit	NA	E5EQ70	Micromonas_sp._RCC1109_virus	30.3	2.4e-60
WP_002782017.1|163831_164296_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_002777599.1|164292_165246_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_002782020.1|165248_166274_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_002777595.1|166270_167017_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	34.2	5.0e-31
>prophage 19
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	174153	181557	1754049		Pseudomonas_phage(25.0%)	9	NA	NA
WP_151061242.1|174153_176097_+	NAD-dependent DNA ligase LigA	NA	A0A1Y0SVC9	Pseudomonas_phage	32.7	1.1e-88
WP_002786117.1|176077_177082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002777566.1|177078_177828_+	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
WP_002780161.1|177796_178633_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_002780163.1|178636_179341_+	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	A0A0N9SHZ9	Staphylococcus_phage	32.1	1.8e-25
WP_002780165.1|179344_179563_-	EexN family lipoprotein	NA	NA	NA	NA	NA
WP_002780167.1|179641_180274_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_002780169.1|180283_180934_-	DNA/RNA non-specific endonuclease	NA	X2KR27	Campylobacter_phage	64.2	2.1e-73
WP_002777553.1|180930_181557_-	endonuclease III	NA	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	28.0	1.5e-15
>prophage 20
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	198898	201217	1754049		Tupanvirus(50.0%)	2	NA	NA
WP_002780196.1|198898_199507_-	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	41.1	5.0e-13
WP_002786129.1|199681_201217_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	30.7	2.9e-17
>prophage 21
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	212618	213440	1754049		Rhodococcus_phage(100.0%)	1	NA	NA
WP_002777466.1|212618_213440_-	M23 family metallopeptidase	NA	A0A2D0ZM66	Rhodococcus_phage	38.4	2.5e-15
>prophage 22
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	218061	221732	1754049		Enterobacteria_phage(33.33%)	3	NA	NA
WP_002781904.1|218061_218436_-	helix-turn-helix transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	43.8	1.4e-05
WP_053877580.1|218452_219352_-	DnaJ family protein	NA	A0A1V0SF83	Hokovirus	28.9	3.5e-18
WP_002777451.1|221057_221732_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	32.9	8.0e-28
>prophage 23
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	235234	244407	1754049		uncultured_virus(40.0%)	10	NA	NA
WP_002777413.1|235234_236440_+	HAMP domain-containing histidine kinase	NA	Q6XLV6	Feldmannia_irregularis_virus	23.4	2.0e-08
WP_002781237.1|236663_236885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002781239.1|236875_237118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002781241.1|237153_238791_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	61.1	2.8e-167
WP_002777403.1|238811_239072_-	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	48.8	1.1e-14
WP_072228281.1|239234_241775_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002777399.1|241784_242396_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	30.3	6.6e-21
WP_151061252.1|242359_243040_+	laccase	NA	NA	NA	NA	NA
WP_002777395.1|243043_243250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002800047.1|243246_244407_-	M23 family metallopeptidase	NA	A8ATH6	Listeria_phage	44.7	2.8e-20
>prophage 24
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	251965	255878	1754049		uncultured_phage(50.0%)	5	NA	NA
WP_002781285.1|251965_252832_+	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	36.5	1.9e-13
WP_002777375.1|252828_253773_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_002781288.1|253765_254101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002781290.1|254142_255024_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_002781292.1|255026_255878_-	carbon-nitrogen hydrolase family protein	NA	M1IKC7	Paramecium_bursaria_Chlorella_virus	29.6	2.1e-17
>prophage 25
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	262321	263314	1754049		Pandoravirus(100.0%)	1	NA	NA
WP_002807373.1|262321_263314_-	isopenicillin N synthase family oxygenase	NA	S4VNP9	Pandoravirus	23.7	4.2e-09
>prophage 26
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	267749	277572	1754049	tRNA	Salmonella_phage(40.0%)	7	NA	NA
WP_002781312.1|267749_269276_-	phosphate permease	NA	A0A0P0CDM4	Ostreococcus_lucimarinus_virus	29.5	5.8e-42
WP_002777344.1|269419_270223_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_002818453.1|271851_272346_+	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	42.4	9.1e-21
WP_002781832.1|272463_273843_+	bipartate energy taxis response protein CetA	NA	A0A2H4J162	uncultured_Caudovirales_phage	55.6	5.9e-17
WP_002823048.1|273860_274358_+	bipartate energy taxis response protein CetB	NA	A0A1B0V854	Salmonella_phage	40.8	2.4e-21
WP_002780562.1|274444_276304_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_002777331.1|276303_277572_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	37.5	1.8e-60
>prophage 27
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	280663	289274	1754049	tRNA	Tupanvirus(25.0%)	9	NA	NA
WP_002777326.1|280663_281827_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	37.2	2.8e-52
WP_002777325.1|281943_282735_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_002780572.1|282734_283808_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_002780580.1|283817_284453_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	6.9e-21
WP_002780591.1|284439_285207_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA	NA
WP_002780593.1|285262_286816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002780595.1|286812_287430_+	guanylate kinase	NA	A0A223FN12	Murmansk_poxvirus	31.2	1.4e-18
WP_002777313.1|287431_287671_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_002780597.1|287681_289274_+|tRNA	arginine--tRNA ligase	tRNA	L7RDT2	Acanthamoeba_polyphaga_moumouvirus	23.0	4.1e-06
>prophage 28
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	295804	307319	1754049		Streptococcus_phage(16.67%)	9	NA	NA
WP_002780610.1|295804_297928_+	cation-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	29.1	2.6e-64
WP_002783001.1|297939_299496_-	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	41.8	4.1e-43
WP_002780613.1|299498_300797_-	transcription termination factor Rho	NA	NA	NA	NA	NA
WP_072212074.1|300909_303273_+	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	29.5	8.1e-75
WP_002777238.1|303494_303794_-	cytochrome c	NA	NA	NA	NA	NA
WP_057991446.1|303870_304434_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_002780616.1|304430_305384_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SL51	Synechococcus_phage	35.4	1.1e-22
WP_002780617.1|305376_306762_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A0K0KVL9	Prochlorococcus_phage	43.8	9.4e-23
WP_002780618.1|306758_307319_+	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	37.4	2.4e-17
>prophage 29
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	320579	324108	1754049		Mocis_latipes_granulovirus(33.33%)	3	NA	NA
WP_025443299.1|320579_321371_+	3'-5' exonuclease	NA	A0A162GX15	Mocis_latipes_granulovirus	26.4	5.4e-07
WP_151061254.1|321427_322414_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	36.1	1.8e-52
WP_002786296.1|322407_324108_+	ATP-binding cassette domain-containing protein	NA	A0A076FI99	Aureococcus_anophage	28.8	4.1e-28
>prophage 30
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	329347	338151	1754049		Klosneuvirus(25.0%)	8	NA	NA
WP_002777209.1|329347_330478_+	N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase	NA	A0A1V0SL50	Klosneuvirus	26.8	2.0e-10
WP_002777206.1|330470_331073_+	undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase	NA	NA	NA	NA	NA
WP_002780649.1|331059_331647_+	UDP-N-acetylbacillosamine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002806646.1|331801_332962_+	UDP-N-acetylbacillosamine transaminase	NA	NA	NA	NA	NA
WP_002777199.1|332964_334737_+	UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)	NA	A0A2P1ELS8	Moumouvirus	27.7	3.4e-25
WP_002777196.1|334951_335344_+	response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	35.3	4.9e-09
WP_002780654.1|335356_336205_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_002780655.1|336204_338151_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5ESM9	Bathycoccus_sp._RCC1105_virus	45.0	2.0e-103
>prophage 31
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	342168	355120	1754049	tRNA,protease	Staphylococcus_phage(28.57%)	13	NA	NA
WP_002782177.1|342168_344286_-	AAA domain-containing protein	NA	K4FB40	Cronobacter_phage	43.9	9.3e-131
WP_002777182.1|344282_344573_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A218MMY6	uncultured_virus	48.9	2.6e-15
WP_002777181.1|344572_345178_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_002777180.1|345187_345640_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	38.9	1.1e-20
WP_002782175.1|345636_346407_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_002777178.1|346403_346631_-	carbon storage regulator CsrA	NA	NA	NA	NA	NA
WP_151061256.1|346624_347443_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_002782172.1|347439_349500_-	AAA family ATPase	NA	A7KV33	Bacillus_phage	36.2	4.3e-96
WP_002777175.1|349496_349934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002782169.1|349933_351649_-	M3 family oligoendopeptidase	NA	A0A1X9I5X5	Streptococcus_phage	22.9	4.0e-23
WP_002777170.1|351658_352540_-	aspartate carbamoyltransferase catalytic subunit	NA	Q84489	Paramecium_bursaria_Chlorella_virus	32.6	8.9e-27
WP_002782167.1|352545_353769_-	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_002777165.1|353920_355120_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	41.1	6.8e-70
>prophage 32
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	359023	364282	1754049	tRNA	uncultured_Mediterranean_phage(66.67%)	4	NA	NA
WP_002777154.1|359023_359296_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	38.7	1.3e-08
WP_002799251.1|359288_360869_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_002777148.1|360868_361840_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	45.1	9.1e-49
WP_151061258.1|361849_364282_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	40.0	3.0e-157
>prophage 33
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	367323	368226	1754049		Rhodococcus_phage(100.0%)	1	NA	NA
WP_002777140.1|367323_368226_+	M23 family metallopeptidase	NA	A0A2D0ZM66	Rhodococcus_phage	47.3	1.6e-18
>prophage 34
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	376384	381590	1754049		Moraxella_phage(66.67%)	6	NA	NA
WP_002780246.1|376384_377122_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	29.8	3.1e-17
WP_002777093.1|377121_377511_-	flagellar assembly protein FliW	NA	NA	NA	NA	NA
WP_002780248.1|377675_378323_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_002783351.1|378338_380714_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	37.1	2.0e-134
WP_002777087.1|380770_381031_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_002780252.1|381041_381590_-	single-stranded DNA-binding protein	NA	A0A0R6PHK0	Moraxella_phage	39.1	7.0e-14
>prophage 35
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	388775	395641	1754049	tRNA	Pseudomonas_phage(33.33%)	4	NA	NA
WP_002780268.1|388775_389864_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	32.4	1.0e-08
WP_151061262.1|389954_392711_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2P1ELB8	Moumouvirus	26.1	1.1e-70
WP_057993430.1|392822_394190_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_057043913.1|394186_395641_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.4	1.9e-98
>prophage 36
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	402481	414643	1754049		Escherichia_phage(40.0%)	10	NA	NA
WP_151061264.1|402481_406372_+	N-6 DNA methylase	NA	A0A2H4PQP4	Staphylococcus_phage	22.2	5.9e-06
WP_134861438.1|406414_407116_+	NAD-dependent deacetylase	NA	A0A023MHA7	Escherichia_phage	42.8	1.6e-31
WP_002780291.1|407108_407711_+	lysine transporter LysE	NA	NA	NA	NA	NA
WP_151061266.1|407715_408813_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_002786157.1|408822_410886_+	N-6 DNA methylase	NA	A0A142K7G3	Mycobacterium_phage	25.7	2.2e-23
WP_002786151.1|410890_411616_+	DUF3800 domain-containing protein	NA	Q71TB8	Escherichia_phage	42.0	4.3e-35
WP_002786150.1|411615_412119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151061268.1|412245_413655_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_002786148.1|413651_413843_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_151061270.1|413839_414643_+	thiamine biosynthesis protein ThiF	NA	A0A1V0SIK8	Klosneuvirus	36.2	1.8e-10
>prophage 37
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	430830	436541	1754049		Streptococcus_phage(50.0%)	4	NA	NA
WP_002779065.1|430830_432627_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.7	4.2e-23
WP_002779064.1|432717_433362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002779063.1|433358_433934_+	ComF family protein	NA	NA	NA	NA	NA
WP_002779062.1|433973_436541_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	34.0	1.1e-106
>prophage 38
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	445427	446880	1754049		Staphylococcus_phage(100.0%)	2	NA	NA
WP_002779026.1|445427_446198_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	2.6e-14
WP_002782151.1|446184_446880_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	7.5e-13
>prophage 39
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	455643	467313	1754049	tRNA,protease	uncultured_Mediterranean_phage(25.0%)	10	NA	NA
WP_002781794.1|455643_456777_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	40.5	4.4e-71
WP_002779007.1|456806_458207_+	potassium transporter TrkA	NA	NA	NA	NA	NA
WP_002779005.1|458374_459430_+	3-dehydroquinate synthase	NA	A0A0P0C619	Ostreococcus_mediterraneus_virus	35.8	4.8e-27
WP_002781791.1|459426_460998_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_002786631.1|460994_462251_+|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	tRNA	NA	NA	NA	NA
WP_002778998.1|462247_463852_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	R4TQL5	Phaeocystis_globosa_virus	45.4	7.4e-72
WP_002778997.1|463906_464323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002778996.1|464422_464941_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002781790.1|464937_465447_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_002778994.1|465447_467313_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.8	5.7e-39
>prophage 40
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	470767	473276	1754049		Staphylococcus_phage(50.0%)	3	NA	NA
WP_002778984.1|470767_471328_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	43.2	2.6e-40
WP_002778983.1|471384_472368_+	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_151061277.1|472364_473276_+	ornithine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	26.6	9.6e-16
>prophage 41
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	483168	483696	1754049		uncultured_virus(100.0%)	1	NA	NA
WP_002781916.1|483168_483696_+	thermonuclease family protein	NA	A0A218ML12	uncultured_virus	35.3	5.5e-08
>prophage 42
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	490118	503518	1754049		Campylobacter_phage(77.78%)	16	NA	NA
WP_002785082.1|490118_490316_-	hypothetical protein	NA	X2KPN2	Campylobacter_phage	93.8	7.0e-25
WP_151061285.1|490269_490653_-	hypothetical protein	NA	X2KX19	Campylobacter_phage	79.3	1.9e-42
WP_151061287.1|490884_491346_-	hypothetical protein	NA	X2KRD2	Campylobacter_phage	89.5	2.7e-75
WP_002781764.1|491335_491809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_137067991.1|491805_492186_-	hypothetical protein	NA	X2KXD5	Campylobacter_phage	92.8	1.3e-56
WP_151061289.1|492182_492818_-	DUF4376 domain-containing protein	NA	X2KRD7	Campylobacter_phage	90.0	3.8e-88
WP_002781758.1|492830_493280_-	hypothetical protein	NA	X2KQT3	Campylobacter_phage	96.0	1.1e-76
WP_151061292.1|493281_494376_-	hypothetical protein	NA	X2KLU0	Campylobacter_phage	75.9	2.8e-30
WP_151061294.1|494379_496041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002782214.1|496043_496238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002784034.1|496218_496623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151061296.1|496622_497657_-	hypothetical protein	NA	A0A2I7SBK1	Pseudomonas_phage	30.5	2.6e-17
WP_002782211.1|497855_498065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002782210.1|498054_498405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002807124.1|498503_499778_-	MFS transporter	NA	NA	NA	NA	NA
WP_151061298.1|499909_503518_-	hypothetical protein	NA	A0A1S5RF23	Helicobacter_phage	39.5	6.2e-18
>prophage 43
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	508098	509391	1754049	terminase	Sinorhizobium_phage(100.0%)	1	NA	NA
WP_151061303.1|508098_509391_-|terminase	terminase	terminase	A0A1Y0T3N1	Sinorhizobium_phage	29.9	8.5e-26
>prophage 44
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	513037	513772	1754049		Campylobacter_phage(100.0%)	1	NA	NA
WP_151061305.1|513037_513772_+	S24 family peptidase	NA	X2KRC9	Campylobacter_phage	46.8	6.9e-33
>prophage 45
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	518827	532901	1754049	transposase,integrase	Campylobacter_phage(60.0%)	22	515164:515180	536259:536275
515164:515180	attL	TAAATAAACTAGAAAAA	NA	NA	NA	NA
WP_004296759.1|518827_519574_+	DNA-binding protein	NA	X2KQ88	Campylobacter_phage	92.1	1.5e-115
WP_151061309.1|519563_520418_+	hypothetical protein	NA	H9C0I7	Bdellovibrio_phage	28.5	2.5e-10
WP_002783970.1|520466_520682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002783968.1|520684_520894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002783967.1|520895_521657_+	hypothetical protein	NA	X2KRC2	Campylobacter_phage	100.0	1.6e-136
WP_038853741.1|521671_521902_+	helix-turn-helix transcriptional regulator	NA	M5A9C2	Nitratiruptor_phage	59.4	3.6e-12
WP_151061391.1|522933_523971_+|transposase	IS1595-like element ISSag10 family transposase	transposase	NA	NA	NA	NA
WP_002587423.1|523994_524420_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_151061311.1|524608_525289_+	phage antirepressor Ant	NA	A0A0M3LQ72	Mannheimia_phage	46.2	1.3e-20
WP_057990838.1|525292_526027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151061312.1|526026_526722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151061394.1|526702_526981_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151061315.1|526961_527714_+	site-specific DNA-methyltransferase	NA	X2KR14	Campylobacter_phage	93.9	1.6e-133
WP_002786664.1|527749_528043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002782536.1|528052_528286_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002782538.1|528282_528660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072234883.1|529314_529599_+	hypothetical protein	NA	A0A0M4S6X1	Salmonella_phage	54.0	4.7e-14
WP_057043743.1|529655_529892_+	hypothetical protein	NA	X2KQ78	Campylobacter_phage	45.7	7.2e-08
WP_151061317.1|530303_530999_+	Rha family transcriptional regulator	NA	X2KM03	Campylobacter_phage	49.8	7.2e-48
WP_002811740.1|531000_531543_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002811742.1|531535_531775_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_151061319.1|531701_532901_-|integrase	tyrosine-type recombinase/integrase	integrase	X2KXI6	Campylobacter_phage	33.0	1.7e-44
536259:536275	attR	TTTTTCTAGTTTATTTA	NA	NA	NA	NA
>prophage 46
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	538344	551553	1754049		Staphylococcus_phage(16.67%)	14	NA	NA
WP_002781705.1|538344_539919_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	52.8	2.5e-152
WP_002781706.1|539928_541314_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_151061321.1|541320_542424_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_002786435.1|542420_543872_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.6	2.4e-45
WP_002779612.1|543861_544557_-	DedA family protein	NA	NA	NA	NA	NA
WP_002779611.1|544566_545115_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	38.2	8.8e-25
WP_002779610.1|545111_545444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002781710.1|545443_545881_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_002779608.1|546049_546604_+	chemotaxis protein CheB	NA	NA	NA	NA	NA
WP_002781712.1|546616_547405_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002784344.1|547567_548296_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	1.3e-31
WP_151061323.1|548320_549100_+	bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein PEB1a	NA	A0A1B1IT51	uncultured_Mediterranean_phage	25.2	7.9e-11
WP_002779604.1|549101_549854_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_002779602.1|550623_551553_+	ribose-phosphate pyrophosphokinase	NA	A0A1V0SHF7	Hokovirus	38.1	3.9e-49
>prophage 47
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	556668	557986	1754049		Bacillus_phage(50.0%)	2	NA	NA
WP_002779597.1|556668_556959_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	55.1	1.4e-16
WP_002781730.1|557086_557986_+	cysteine synthase A	NA	A0A1W6JHY1	Lactococcus_phage	51.3	1.3e-70
>prophage 48
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	561117	567989	1754049	tRNA	Yellowstone_lake_mimivirus(33.33%)	8	NA	NA
WP_002786429.1|561117_562107_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	25.7	5.3e-12
WP_002786427.1|562109_562577_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_151061395.1|562733_564167_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_002784341.1|564193_564922_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	3.8e-31
WP_002776991.1|564914_565658_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_002776988.1|565902_566472_+	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein	NA	NA	NA	NA	NA
WP_002776987.1|566510_566876_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
WP_002776986.1|566996_567989_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	34.9	2.9e-34
>prophage 49
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	574698	580148	1754049		Catovirus(50.0%)	4	NA	NA
WP_002781748.1|574698_576282_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.1	2.1e-42
WP_002776972.1|576268_576931_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002776969.1|576924_578208_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_002786413.1|578216_580148_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	29.9	4.9e-46
>prophage 50
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	583848	587256	1754049	integrase	Acinetobacter_phage(50.0%)	3	585160:585176	596457:596473
WP_002776954.1|583848_584427_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	39.3	5.5e-33
WP_002785427.1|584423_586202_-	para-aminobenzoate synthase	NA	NA	NA	NA	NA
585160:585176	attL	AATTCTTTAATTTCTTC	NA	NA	NA	NA
WP_002794337.1|586191_587256_-|integrase	tyrosine-type recombinase/integrase	integrase	R9TMQ4	Vibrio_phage	27.0	1.0e-08
WP_002794337.1|586191_587256_-|integrase	tyrosine-type recombinase/integrase	integrase	R9TMQ4	Vibrio_phage	27.0	1.0e-08
596457:596473	attR	AATTCTTTAATTTCTTC	NA	NA	NA	NA
>prophage 51
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	603658	604933	1754049		Heterosigma_akashiwo_virus(100.0%)	1	NA	NA
WP_072212067.1|603658_604933_+	aminotransferase class V-fold PLP-dependent enzyme	NA	A0A1C9C5E2	Heterosigma_akashiwo_virus	30.1	1.8e-36
>prophage 52
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	613152	625508	1754049		Paramecium_bursaria_Chlorella_virus(40.0%)	10	NA	NA
WP_002782290.1|613152_614496_-	AAA family ATPase	NA	A0A2I7RDQ5	Vibrio_phage	31.5	1.2e-43
WP_151061328.1|614544_615909_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002782288.1|615945_616818_-	N-carbamoylputrescine amidohydrolase	NA	M1IKC7	Paramecium_bursaria_Chlorella_virus	38.9	4.8e-49
WP_002782287.1|616814_617702_-	cation transporter	NA	NA	NA	NA	NA
WP_002776887.1|617698_618676_-	hypothetical protein	NA	M1HH76	Paramecium_bursaria_Chlorella_virus	28.0	8.6e-39
WP_002776884.1|618772_619210_-	META domain-containing protein	NA	NA	NA	NA	NA
WP_002782286.1|619219_620812_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_002782284.1|620906_622439_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	50.3	1.2e-42
WP_002782282.1|622554_623325_-	DnaJ family molecular chaperone	NA	NA	NA	NA	NA
WP_002782280.1|623321_625508_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.9	1.2e-144
>prophage 53
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	629287	629632	1754049		Staphylococcus_phage(100.0%)	1	NA	NA
WP_072212086.1|629287_629632_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	45.7	2.0e-11
>prophage 54
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	644085	644943	1754049		Enterococcus_phage(100.0%)	1	NA	NA
WP_002776802.1|644085_644943_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	34.4	8.1e-33
>prophage 55
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	657353	660282	1754049	tRNA	Hokovirus(50.0%)	3	NA	NA
WP_002813455.1|657353_658196_+	class 1 fructose-bisphosphatase	NA	A0A1V0SEY8	Hokovirus	33.3	1.1e-29
WP_002776770.1|658188_658386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057991542.1|658395_660282_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	34.8	2.7e-81
>prophage 56
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	668049	677581	1754049	tRNA	Moumouvirus(25.0%)	9	NA	NA
WP_002807467.1|668049_669138_+|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	A0A2P1ELP3	Moumouvirus	29.2	2.2e-14
WP_002776757.1|669149_669560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151061334.1|669723_670143_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_002780366.1|670136_671348_+	threonine ammonia-lyase	NA	A0A1W6JHY1	Lactococcus_phage	23.7	1.1e-06
WP_087721314.1|671344_672070_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_002776751.1|672066_673092_-	LptF/LptG family permease	NA	NA	NA	NA	NA
WP_002780364.1|673088_673868_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_002780363.1|673857_674526_-	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	37.0	3.5e-15
WP_002780362.1|676291_677581_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7P8	Chrysochromulina_ericina_virus	35.6	1.3e-31
>prophage 57
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	684370	693347	1754049	tRNA	Prochlorococcus_phage(25.0%)	8	NA	NA
WP_002783778.1|684370_685117_-	NAD+ synthase	NA	A0A0K0KVL1	Prochlorococcus_phage	33.9	2.8e-21
WP_002776717.1|685190_685787_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_002776716.1|685798_686104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002776714.1|686989_687886_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_002780348.1|687888_689130_-	insulinase family protein	NA	A0A2P1EIE5	Megavirus	25.0	6.7e-28
WP_002780347.1|689126_690185_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_002786669.1|690230_691964_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.7	6.0e-59
WP_002776706.1|691964_693347_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	32.1	8.7e-53
>prophage 58
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	705574	707515	1754049	tRNA	Synechococcus_phage(50.0%)	2	NA	NA
WP_002780400.1|705574_706399_-	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	33.3	1.2e-14
WP_002780402.1|706399_707515_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0U4J6Z1	Vibrio_phage	38.5	5.2e-24
>prophage 59
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	717780	724516	1754049	tRNA	Bacillus_phage(33.33%)	4	NA	NA
WP_002780416.1|717780_719811_-	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	27.4	5.8e-45
WP_002776668.1|719932_720862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151061336.1|720887_723500_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	39.4	3.2e-149
WP_002776666.1|723505_724516_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.5	2.8e-32
>prophage 60
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	729336	731605	1754049	tRNA	uncultured_Mediterranean_phage(33.33%)	3	NA	NA
WP_002780067.1|729336_729813_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.3	1.2e-25
WP_002780065.1|729803_730382_+	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	32.7	1.9e-09
WP_002780063.1|730378_731605_+|tRNA	histidine--tRNA ligase	tRNA	A0A1V0SFH3	Hokovirus	26.7	6.4e-23
>prophage 61
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	737935	745209	1754049	transposase	Powai_lake_megavirus(33.33%)	6	NA	NA
WP_002780053.1|737935_739807_-	molecular chaperone DnaK	NA	A0A167RF67	Powai_lake_megavirus	47.0	1.4e-149
WP_057043794.1|739828_740359_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_072215643.1|740355_741150_-	HrcA family transcriptional regulator	NA	NA	NA	NA	NA
WP_002839246.1|741450_743541_-	TonB-dependent ferric enterobactin receptor CfrA	NA	A0A0P0I887	Acinetobacter_phage	27.9	2.9e-07
WP_151061338.1|743865_744564_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_002780048.1|744654_745209_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RHD5	Helicobacter_phage	61.6	3.5e-53
>prophage 62
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	755248	756238	1754049		Bacillus_virus(100.0%)	1	NA	NA
WP_002781809.1|755248_756238_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	39.4	6.5e-34
>prophage 63
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	768649	772252	1754049		Streptomyces_phage(100.0%)	1	NA	NA
WP_002781553.1|768649_772252_-	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	39.8	4.4e-197
>prophage 64
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	778257	779010	1754049		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_002781565.1|778257_779010_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.4	2.8e-05
>prophage 65
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	783505	784762	1754049		Phage_TP(100.0%)	1	NA	NA
WP_002776479.1|783505_784762_-	U32 family peptidase	NA	Q6DW11	Phage_TP	33.5	1.9e-38
>prophage 66
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	807219	807990	1754049	holin	Bacillus_virus(100.0%)	1	NA	NA
WP_002781608.1|807219_807990_+|holin	phosphocholine cytidylyltransferase family protein	holin	G3MA50	Bacillus_virus	50.9	8.4e-05
>prophage 67
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	815739	816468	1754049		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002781615.1|815739_816468_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.6	4.0e-25
>prophage 68
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	823359	825147	1754049		Acinetobacter_phage(100.0%)	1	NA	NA
WP_002781637.1|823359_825147_+	aminopeptidase P family protein	NA	A0A0P0I8D7	Acinetobacter_phage	47.2	4.0e-159
>prophage 69
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	829043	831453	1754049		Dickeya_phage(33.33%)	3	NA	NA
WP_002776387.1|829043_829532_-	HAD-IIIA family hydrolase	NA	A0A140XBD6	Dickeya_phage	38.0	3.7e-14
WP_002776386.1|829535_830375_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	49.1	1.3e-22
WP_002776385.1|830319_831453_-	lytic transglycosylase domain-containing protein	NA	A0A218M4G6	Pasteurella_phage	34.1	2.2e-09
>prophage 70
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	836067	838919	1754049	tRNA	Klosneuvirus(50.0%)	3	NA	NA
WP_002812716.1|836067_837819_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	24.3	2.1e-11
WP_002781658.1|837815_838391_+	adenylate kinase	NA	NA	NA	NA	NA
WP_002776378.1|838400_838919_+	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	48.6	6.0e-39
>prophage 71
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	843891	847921	1754049		Lactococcus_phage(50.0%)	3	NA	NA
WP_151061343.1|843891_845826_+	VacB/RNase II family 3'-5' exoribonuclease	NA	Q0GXV6	Lactococcus_phage	29.9	1.5e-39
WP_002816775.1|845818_846784_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_002799865.1|846877_847921_+	hypothetical protein	NA	A0A1S5SAB0	Streptococcus_phage	35.8	3.5e-54
>prophage 72
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	859623	865630	1754049		Planktothrix_phage(33.33%)	6	NA	NA
WP_002776307.1|859623_860364_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	5.4e-17
WP_002791807.1|860360_861449_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_002776292.1|861445_862360_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_002798974.1|862369_863365_-	phosphate-binding protein	NA	A0A1B1IWY0	uncultured_Mediterranean_phage	42.2	2.8e-61
WP_002776281.1|863703_864204_+	ferritin	NA	NA	NA	NA	NA
WP_151061347.1|864253_865630_+	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	38.8	4.4e-49
>prophage 73
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	869206	871132	1754049		Planktothrix_phage(100.0%)	1	NA	NA
WP_002812610.1|869206_871132_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	43.1	4.8e-33
>prophage 74
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	879999	881124	1754049		Catovirus(100.0%)	1	NA	NA
WP_002790050.1|879999_881124_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	27.9	1.4e-24
>prophage 75
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	889814	899936	1754049	tRNA	uncultured_Caudovirales_phage(25.0%)	9	NA	NA
WP_002780925.1|889814_891785_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	33.2	7.6e-18
WP_002776244.1|891784_892876_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_002786039.1|892872_894078_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	28.8	8.4e-28
WP_004284955.1|894093_896289_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	39.4	9.4e-09
WP_002776235.1|896272_896497_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002776232.1|896510_897227_-	UMP kinase	NA	NA	NA	NA	NA
WP_002811044.1|897278_898481_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_002776224.1|898477_899284_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002776215.1|899270_899936_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.1	9.1e-16
>prophage 76
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	905624	911887	1754049		Escherichia_phage(33.33%)	5	NA	NA
WP_002780905.1|905624_906998_-	replicative DNA helicase	NA	A0A077SK18	Escherichia_phage	36.9	2.9e-72
WP_002776199.1|907139_908069_+	DUF2860 domain-containing protein	NA	NA	NA	NA	NA
WP_002780904.1|908091_909423_-	multidrug transporter MatE	NA	NA	NA	NA	NA
WP_002780903.1|909648_910584_-	SidA/IucD/PvdA family monooxygenase	NA	A0A2K9L162	Tupanvirus	27.5	2.7e-05
WP_002780902.1|910654_911887_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	38.9	1.4e-73
>prophage 77
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	920343	922053	1754049	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_072237241.1|920343_922053_-|tRNA	proline--tRNA ligase	tRNA	A0A2I2L3K8	Orpheovirus	23.1	6.8e-07
>prophage 78
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	928905	930069	1754049		Tupanvirus(100.0%)	1	NA	NA
WP_002776084.1|928905_930069_-	ADP-forming succinate--CoA ligase subunit beta	NA	A0A2K9L5E9	Tupanvirus	24.3	8.8e-06
>prophage 79
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	942429	960003	1754049	tRNA	Tupanvirus(25.0%)	15	NA	NA
WP_002780860.1|942429_944259_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	31.9	5.1e-85
WP_002780858.1|944331_944700_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	36.8	6.2e-06
WP_032702479.1|944693_945386_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_002780850.1|945366_946566_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
WP_002776057.1|946562_947207_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_002776055.1|947206_947452_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002776052.1|947460_948171_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A127KMU1	Cyanophage	40.0	5.7e-40
WP_025443335.1|948173_949511_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	27.0	1.5e-22
WP_002779742.1|949654_949936_+	metal-sensing transcriptional repressor	NA	NA	NA	NA	NA
WP_002780845.1|950070_952644_+	AAA domain-containing protein	NA	K4FB40	Cronobacter_phage	34.2	1.3e-115
WP_002823720.1|952686_954618_-	penicillin-binding protein 1A	NA	NA	NA	NA	NA
WP_002779739.1|954614_955166_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_002779738.1|955169_957698_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L1X7	Tupanvirus	37.8	6.4e-78
WP_002780829.1|957814_958894_+	DegT/DnrJ/EryC1/StrS aminotransferase family protein	NA	A0A2K9L0G1	Tupanvirus	33.3	1.4e-34
WP_002780827.1|958890_960003_+	cobalamin-independent methionine synthase II family protein	NA	A0A218MNE0	uncultured_virus	40.8	3.2e-66
>prophage 80
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	964967	970441	1754049		Acinetobacter_phage(50.0%)	5	NA	NA
WP_002780808.1|964967_965744_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	38.6	7.3e-41
WP_002779477.1|965740_967018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002779476.1|966990_967365_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
WP_002779475.1|967354_968056_-	methyltransferase	NA	NA	NA	NA	NA
WP_002780804.1|968365_970441_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	26.7	1.5e-64
>prophage 81
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	980750	989430	1754049		Vibrio_phage(50.0%)	2	NA	NA
WP_002806552.1|980750_985301_-	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	26.0	1.1e-67
WP_072212059.1|985293_989430_-	DNA-directed RNA polymerase subunit beta	NA	F2Y186	Organic_Lake_phycodnavirus	30.2	1.0e-24
>prophage 82
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	992817	995424	1754049		Aureococcus_anophage(50.0%)	2	NA	NA
WP_002779448.1|992817_994017_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	27.4	2.3e-33
WP_002779794.1|994686_995424_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	9.7e-35
>prophage 83
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	999657	1001924	1754049		Bacillus_virus(50.0%)	2	NA	NA
WP_002778469.1|999657_1000878_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	21.5	1.3e-07
WP_002778468.1|1000877_1001924_-	dehypoxanthine futalosine cyclase	NA	A9ZMK9	Mamastrovirus	47.9	1.4e-23
>prophage 84
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1010056	1016068	1754049		Streptococcus_phage(33.33%)	7	NA	NA
WP_002780764.1|1010056_1010818_-	3'-5' exonuclease	NA	A0A1X9I5C8	Streptococcus_phage	34.0	2.8e-13
WP_002783571.1|1010814_1011462_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_002778456.1|1011600_1011795_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_002778454.1|1011991_1012207_+	YdcH family protein	NA	NA	NA	NA	NA
WP_069284852.1|1012218_1013313_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	69.1	2.9e-11
WP_002782203.1|1013333_1013927_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002782201.1|1014004_1016068_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	33.1	1.5e-11
>prophage 85
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1024596	1025340	1754049		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_002800110.1|1024596_1025340_-	3-oxoacyl-ACP reductase FabG	NA	F2NZ40	Diadromus_pulchellus_ascovirus	30.6	9.2e-17
>prophage 86
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1036598	1038236	1754049		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_002780752.1|1036598_1038236_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	25.5	1.2e-11
>prophage 87
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1042203	1045150	1754049		Streptococcus_phage(50.0%)	4	NA	NA
WP_002778421.1|1042203_1042788_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	37.4	1.2e-19
WP_002778419.1|1042819_1043197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004284883.1|1043247_1043583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002780746.1|1043572_1045150_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	27.1	3.2e-51
>prophage 88
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1055326	1057318	1754049		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002780726.1|1055326_1057318_-	fumarate reductase flavoprotein subunit	NA	M1HTN0	Paramecium_bursaria_Chlorella_virus	26.2	8.5e-17
>prophage 89
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1062208	1064958	1754049	tRNA	Aeromonas_phage(50.0%)	2	NA	NA
WP_002778360.1|1062208_1063453_-	serine hydroxymethyltransferase	NA	A0A219YB23	Aeromonas_phage	51.7	2.0e-101
WP_002778358.1|1063449_1064958_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	40.2	5.7e-90
>prophage 90
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1075149	1076385	1754049	tRNA	uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_002780709.1|1075149_1076385_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.5	3.3e-88
>prophage 91
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1080261	1081540	1754049		Cafeteria_roenbergensis_virus(50.0%)	2	NA	NA
WP_002778320.1|1080261_1081074_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	43.0	5.5e-47
WP_002778318.1|1081075_1081540_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	45.3	7.7e-30
>prophage 92
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1088554	1090662	1754049		Streptococcus_phage(50.0%)	2	NA	NA
WP_002780698.1|1088554_1089490_-	D-2-hydroxyacid dehydrogenase	NA	M1NSB9	Streptococcus_phage	25.6	2.1e-18
WP_002778292.1|1089492_1090662_-	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	33.9	5.8e-42
>prophage 93
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1095046	1098169	1754049		Leptospira_phage(100.0%)	1	NA	NA
WP_151061356.1|1095046_1098169_+	multidrug efflux RND transporter permease subunit CmeB	NA	S5VTK5	Leptospira_phage	22.3	8.5e-64
>prophage 94
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1112498	1124389	1754049		Acinetobacter_phage(33.33%)	9	NA	NA
WP_002778234.1|1112498_1114091_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	31.6	2.4e-38
WP_002778232.1|1114092_1115334_-	anthranilate synthase component I family protein	NA	NA	NA	NA	NA
WP_002778230.1|1115717_1116503_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_002778228.1|1116590_1119413_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	49.8	1.6e-250
WP_002778227.1|1119414_1119948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002778226.1|1119969_1120647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002778225.1|1120659_1121250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002778224.1|1121242_1121686_+	DedA family protein	NA	NA	NA	NA	NA
WP_002780668.1|1121749_1124389_+	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	29.6	8.8e-62
>prophage 95
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1128376	1133758	1754049		Anguillid_herpesvirus(33.33%)	7	NA	NA
WP_002778209.1|1128376_1128790_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.4	2.4e-22
WP_002778207.1|1128789_1129149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002778205.1|1129172_1129319_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_002786211.1|1129324_1130311_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_002778202.1|1130303_1131281_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_002778200.1|1131508_1132585_-	phosphoserine transaminase	NA	M1Q1P2	Streptococcus_phage	40.2	1.6e-70
WP_002778198.1|1132594_1133758_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SIT1	Klosneuvirus	37.4	4.9e-41
>prophage 96
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1144842	1148971	1754049		Faustovirus(50.0%)	4	NA	NA
WP_002818357.1|1144842_1145937_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	25.8	1.7e-14
WP_002818360.1|1145923_1147006_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_004285064.1|1146993_1147761_-	HAD-IIA family hydrolase	NA	NA	NA	NA	NA
WP_004285063.1|1147762_1148971_-	diaminopimelate decarboxylase	NA	A0A060D2X4	Bovine_gammaherpesvirus	26.2	1.3e-20
>prophage 97
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1154577	1167190	1754049	tRNA	Emiliania_huxleyi_virus(14.29%)	20	NA	NA
WP_002827180.1|1154577_1155720_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	25.9	3.6e-28
WP_002778143.1|1155716_1156328_+	DUF452 family protein	NA	NA	NA	NA	NA
WP_002778141.1|1156324_1157011_+	malonyl-ACP O-methyltransferase BioC	NA	NA	NA	NA	NA
WP_002785356.1|1157064_1157814_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002812369.1|1157810_1158212_+	molybdenum-pterin-binding protein	NA	NA	NA	NA	NA
WP_002778136.1|1158204_1158873_+	molybdate ABC transporter permease subunit	NA	Q6GZ02	Mycoplasma_phage	31.4	4.3e-05
WP_002778133.1|1158882_1159767_+	sulfate/molybdate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.2	2.3e-22
WP_002812372.1|1159851_1160625_-	OXA-61 family class D beta-lactamase OXA-578	NA	NA	NA	NA	NA
WP_002783229.1|1160844_1161669_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	39.5	1.6e-49
WP_002812374.1|1161679_1162528_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_002778106.1|1162524_1162905_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_002783237.1|1163015_1163474_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_072212055.1|1163457_1164117_-|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	29.4	6.0e-12
WP_002781752.1|1164106_1164883_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	33.7	8.7e-34
WP_052793404.1|1165120_1165336_+	glycerol-3-phosphate ABC transporter	NA	NA	NA	NA	NA
WP_002788016.1|1165332_1165536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100219628.1|1165685_1165853_+	phosphoglycerate transporter	NA	NA	NA	NA	NA
WP_004284786.1|1165856_1165985_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072232225.1|1166048_1166426_+	phosphoglycerate transporter	NA	NA	NA	NA	NA
WP_002782080.1|1166413_1167190_+	cytolethal distending toxin subunit Cc-CdtA	NA	A5LH52	Enterobacteria_phage	35.6	7.1e-20
>prophage 98
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1172030	1179210	1754049		Bacillus_thuringiensis_phage(75.0%)	8	NA	NA
WP_002778075.1|1172030_1172987_+	chemotaxis protein CheV	NA	Q56AR1	Bacillus_thuringiensis_phage	31.0	1.9e-38
WP_002782069.1|1172990_1175285_+	hybrid sensor histidine kinase/response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	26.7	2.0e-14
WP_002778071.1|1175289_1175811_+	purine-binding chemotaxis protein CheW	NA	Q56AR1	Bacillus_thuringiensis_phage	22.5	2.5e-05
WP_002778068.1|1175810_1176434_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_002778066.1|1176435_1177422_+	transaldolase	NA	NA	NA	NA	NA
WP_002778064.1|1177418_1177841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002782066.1|1177840_1178362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002782064.1|1178358_1179210_-	site-specific DNA-methyltransferase	NA	A0A1W6JJW1	Lactococcus_phage	32.2	1.8e-24
>prophage 99
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1188875	1194965	1754049	protease	Tupanvirus(50.0%)	5	NA	NA
WP_002778051.1|1188875_1190783_-	propionyl-CoA synthetase	NA	A0A2K9L3I8	Tupanvirus	19.9	1.6e-12
WP_002782477.1|1191030_1191954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002778048.1|1191948_1192698_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_002782475.1|1192687_1193728_-	rod shape-determining protein	NA	NA	NA	NA	NA
WP_002782474.1|1193741_1194965_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	54.0	8.1e-119
>prophage 100
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1201568	1203686	1754049		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_115596128.1|1201568_1203686_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	82.9	7.7e-08
>prophage 101
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1208440	1209199	1754049		Cafeteria_roenbergensis_virus(100.0%)	1	NA	NA
WP_002778010.1|1208440_1209199_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	35.1	3.6e-32
>prophage 102
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1216388	1235038	1754049	tRNA	uncultured_Mediterranean_phage(20.0%)	20	NA	NA
WP_002781886.1|1216388_1217570_+	cysteine desulfurase, NifS family	NA	H7BUW1	unidentified_phage	37.1	1.5e-32
WP_002777977.1|1217581_1218553_+	iron-sulfur cluster assembly scaffold protein NifU	NA	A0A1B1IT19	uncultured_Mediterranean_phage	37.6	1.6e-13
WP_151061363.1|1218575_1220420_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_002781884.1|1220454_1221090_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_002777968.1|1221248_1221944_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	31.1	8.9e-14
WP_002777966.1|1222050_1222407_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_002777964.1|1222423_1222981_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002777962.1|1222983_1223592_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_002777961.1|1223592_1224003_+	RDD family protein	NA	NA	NA	NA	NA
WP_002777960.1|1224017_1225040_+	ribonucleotide-diphosphate reductase subunit beta	NA	A2PYN0	Cyanophage	33.4	6.4e-45
WP_002781883.1|1225061_1226450_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	40.4	1.5e-89
WP_002781878.1|1226543_1227083_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_002781876.1|1227201_1227831_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	37.0	2.0e-20
WP_004284757.1|1227850_1229041_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	30.1	9.2e-35
WP_002781872.1|1229044_1229884_-	acetylglutamate kinase	NA	NA	NA	NA	NA
WP_002781870.1|1229893_1230340_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002781868.1|1230350_1231379_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_002777944.1|1231571_1232675_-	restriction endonuclease subunit M	NA	E4WLV9	Ostreococcus_tauri_virus	40.2	2.5e-63
WP_002781867.1|1232714_1233233_-	translation initiation factor IF-3	NA	K4F6Y6	Cronobacter_phage	30.0	6.9e-11
WP_002781865.1|1233229_1235038_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.7	2.2e-112
>prophage 103
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1247624	1253801	1754049	protease	Bacillus_phage(33.33%)	5	NA	NA
WP_002781850.1|1247624_1248806_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	36.1	3.6e-55
WP_002800288.1|1248875_1249604_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_002800289.1|1249605_1250943_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.4	1.9e-57
WP_002800290.1|1250946_1251759_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_107127954.1|1252061_1253801_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	80.9	3.9e-10
>prophage 104
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1270270	1271639	1754049		Anomala_cuprea_entomopoxvirus(100.0%)	2	NA	NA
WP_002781479.1|1270270_1270936_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.8	1.5e-10
WP_002781477.1|1270928_1271639_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.9	2.2e-12
>prophage 105
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1278388	1280020	1754049		Aureococcus_anophage(100.0%)	1	NA	NA
WP_002781464.1|1278388_1280020_-	multidrug ABC transporter permease/ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	25.4	6.7e-12
>prophage 106
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1286189	1287050	1754049		Moraxella_phage(100.0%)	1	NA	NA
WP_002781437.1|1286189_1287050_+	YafY family transcriptional regulator	NA	A0A0R6PH67	Moraxella_phage	30.8	5.3e-32
>prophage 107
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1290645	1295209	1754049		Cellulophaga_phage(50.0%)	5	NA	NA
WP_002781426.1|1290645_1291545_+	ATP phosphoribosyltransferase	NA	A0A0F7Q4B0	Cellulophaga_phage	67.6	7.5e-05
WP_002781425.1|1291552_1292839_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
WP_002781423.1|1292835_1293897_+	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
WP_002781421.1|1293893_1294481_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
WP_151061368.1|1294477_1295209_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	A0A2H4UVM0	Bodo_saltans_virus	27.0	5.9e-08
>prophage 108
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1306637	1313572	1754049		Acinetobacter_phage(33.33%)	6	NA	NA
WP_002812984.1|1306637_1308746_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	29.0	1.7e-07
WP_002779522.1|1308720_1309707_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_025431480.1|1309706_1310483_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	29.1	4.0e-15
WP_002786540.1|1310479_1311286_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002781398.1|1311282_1312140_-	radical SAM protein	NA	NA	NA	NA	NA
WP_002793433.1|1312309_1313572_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	27.3	1.0e-31
>prophage 109
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1319629	1320610	1754049		Indivirus(100.0%)	1	NA	NA
WP_002782427.1|1319629_1320610_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.5	4.0e-28
>prophage 110
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1335518	1338521	1754049		Moraxella_phage(25.0%)	4	NA	NA
WP_002778876.1|1335518_1336067_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	43.6	9.8e-16
WP_002821835.1|1336328_1337420_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	40.7	1.5e-63
WP_002778874.1|1337419_1338094_-	ribonuclease III	NA	A0A2K9L8W0	Tupanvirus	33.7	6.4e-25
WP_002778873.1|1338080_1338521_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	40.0	1.9e-25
>prophage 111
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1348821	1349544	1754049		Planktothrix_phage(100.0%)	1	NA	NA
WP_002781968.1|1348821_1349544_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.6	3.3e-19
>prophage 112
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1353427	1356215	1754049		uncultured_Caudovirales_phage(66.67%)	3	NA	NA
WP_002778850.1|1353427_1353892_-	hypothetical protein	NA	A0A2H5BM69	Streptomyces_phage	42.1	4.4e-17
WP_002783063.1|1353900_1355070_-	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	43.0	7.6e-66
WP_002778847.1|1355066_1356215_-	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	46.4	1.2e-76
>prophage 113
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1363183	1363831	1754049		Planktothrix_phage(100.0%)	1	NA	NA
WP_002781337.1|1363183_1363831_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	1.1e-29
>prophage 114
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1372799	1373495	1754049		Sphenicid_alphaherpesvirus(100.0%)	1	NA	NA
WP_002778786.1|1372799_1373495_+	uracil-DNA glycosylase	NA	A0A1R3T3N6	Sphenicid_alphaherpesvirus	43.2	3.6e-47
>prophage 115
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1386285	1387182	1754049		Citrobacter_phage(100.0%)	1	NA	NA
WP_002778765.1|1386285_1387182_-	signal peptide peptidase SppA	NA	A0A0A0RQ86	Citrobacter_phage	36.4	9.7e-21
>prophage 116
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1409553	1411362	1754049		Tupanvirus(100.0%)	1	NA	NA
WP_002807565.1|1409553_1411362_+	translational GTPase TypA	NA	A0A2K9L2P9	Tupanvirus	37.1	7.0e-26
>prophage 117
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1419421	1423234	1754049		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_151061375.1|1419421_1423234_-	class I SAM-dependent DNA methyltransferase	NA	A0A1B1IUC6	uncultured_Mediterranean_phage	25.2	3.5e-11
>prophage 118
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1434781	1443957	1754049		Moraxella_phage(20.0%)	6	NA	NA
WP_002812203.1|1434781_1436353_-	single-stranded-DNA-specific exonuclease RecJ	NA	A0A0R6PDC6	Moraxella_phage	47.4	1.4e-54
WP_151061377.1|1436339_1437974_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	51.9	2.6e-144
WP_002779278.1|1438086_1438710_+	FAD-dependent thymidylate synthase	NA	A0A1B0XW95	Campylobacter_phage	51.2	1.4e-47
WP_057993505.1|1438827_1440213_+	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA	NA
WP_057993506.1|1440244_1442614_-	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	38.0	2.0e-142
WP_002779897.1|1442628_1443957_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	8.4e-21
>prophage 119
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1447687	1448362	1754049		Streptococcus_virus(100.0%)	1	NA	NA
WP_002779909.1|1447687_1448362_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A1U9WRB5	Streptococcus_virus	36.5	6.2e-28
>prophage 120
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1452569	1453145	1754049		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_002818690.1|1452569_1453145_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	39.7	5.8e-19
>prophage 121
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1467252	1472151	1754049		Bacillus_virus(33.33%)	3	NA	NA
WP_002779380.1|1467252_1469565_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	38.5	1.2e-126
WP_002779930.1|1469596_1470664_-	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	22.0	8.3e-11
WP_002779932.1|1470828_1472151_-	chromosomal replication initiator protein DnaA	NA	A0A1B1INM7	uncultured_Mediterranean_phage	29.9	1.2e-06
>prophage 122
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1479324	1480468	1754049		Tupanvirus(50.0%)	2	NA	NA
WP_002779369.1|1479324_1479924_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K9L162	Tupanvirus	31.2	1.7e-08
WP_002779368.1|1480084_1480468_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	R4T9S8	Halovirus	35.9	7.6e-07
>prophage 123
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1507281	1509384	1754049		Catovirus(100.0%)	1	NA	NA
WP_002780003.1|1507281_1509384_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.0	3.4e-101
>prophage 124
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1516726	1520762	1754049		Bacillus_phage(33.33%)	5	NA	NA
WP_002779414.1|1516726_1517758_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	63.1	3.3e-113
WP_002779413.1|1517757_1519002_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	53.3	2.2e-111
WP_002779412.1|1519067_1519271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002780014.1|1519260_1519923_+	AMIN domain-containing protein	NA	NA	NA	NA	NA
WP_002779410.1|1519922_1520762_+	DNA ligase	NA	A0A1X9VNY8	Mimivirus	33.6	7.2e-26
>prophage 125
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1531079	1536435	1754049	tRNA	Streptococcus_phage(25.0%)	7	NA	NA
WP_002779409.1|1531079_1531835_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	38.9	2.1e-37
WP_002779407.1|1532101_1532830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002779406.1|1532744_1533137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002779405.1|1533278_1534196_+|tRNA	methionyl-tRNA formyltransferase	tRNA	M4QRX9	Synechococcus_phage	26.4	9.0e-06
WP_002779404.1|1534158_1534812_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_002779403.1|1534808_1535594_+	ParA family protein	NA	H7BUL8	unidentified_phage	33.0	1.0e-18
WP_002779402.1|1535598_1536435_+	ParB/RepB/Spo0J family partition protein	NA	S5VSZ7	Leptospira_phage	31.6	1.1e-15
>prophage 126
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1548877	1549639	1754049	tRNA	Escherichia_phage(100.0%)	1	NA	NA
WP_002782366.1|1548877_1549639_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	32.5	2.4e-28
>prophage 127
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1564663	1576603	1754049		Cafeteria_roenbergensis_virus(20.0%)	13	NA	NA
WP_002780115.1|1564663_1567234_+	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	27.5	1.6e-28
WP_002778650.1|1567230_1567593_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_002778643.1|1567582_1568026_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_002780112.1|1568099_1568387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002780108.1|1568585_1569041_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_002778637.1|1569283_1570090_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002780105.1|1570082_1570937_-	metal ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	32.7	8.1e-17
WP_002820886.1|1570949_1571804_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002780097.1|1572114_1573446_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_072217786.1|1573445_1574048_-	GTP cyclohydrolase I FolE	NA	A0A0P0HSD2	Acinetobacter_phage	55.7	8.7e-50
WP_151061384.1|1574138_1575464_+	trigger factor	NA	NA	NA	NA	NA
WP_002783575.1|1575463_1576048_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	59.8	1.2e-56
WP_002778535.1|1576075_1576603_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.1	7.2e-16
>prophage 128
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1580149	1584316	1754049		Prochlorococcus_phage(33.33%)	5	NA	NA
WP_002778539.1|1580149_1580725_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	39.9	1.1e-25
WP_002806314.1|1581267_1581984_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_002778542.1|1582124_1582865_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	46.5	4.1e-41
WP_002806318.1|1582914_1583124_+	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_151061385.1|1583185_1584316_+	serine/threonine protein phosphatase	NA	A0A220BYT7	Staphylococcus_phage	31.6	8.4e-46
>prophage 129
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1596206	1599045	1754049		Bacillus_virus(50.0%)	3	NA	NA
WP_072217785.1|1596206_1597115_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.4	8.3e-20
WP_002778575.1|1597150_1598356_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_002778576.1|1598382_1599045_-	superoxide dismutase [Fe]	NA	Q56AR7	Bacillus_thuringiensis_phage	33.5	1.3e-25
>prophage 130
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1604745	1608657	1754049		Cellulophaga_phage(50.0%)	7	NA	NA
WP_002781502.1|1604745_1605489_+	7-carboxy-7-deazaguanine synthase QueE	NA	M1PXL8	Cellulophaga_phage	32.4	6.2e-21
WP_002778599.1|1605485_1606067_+	6-carboxytetrahydropterin synthase	NA	NA	NA	NA	NA
WP_002778601.1|1606066_1606489_+	cytochrome c	NA	NA	NA	NA	NA
WP_002778609.1|1606489_1606897_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002781505.1|1606897_1607551_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_002778612.1|1607629_1607830_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_002778615.1|1607832_1608657_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	39.0	1.3e-35
>prophage 131
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1613955	1615344	1754049		Staphylococcus_phage(50.0%)	2	NA	NA
WP_002778629.1|1613955_1614270_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	48.9	1.5e-21
WP_002785476.1|1614405_1615344_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	42.2	5.5e-59
>prophage 132
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1621088	1621825	1754049		Staphylococcus_phage(50.0%)	2	NA	NA
WP_002781069.1|1621088_1621511_-	low molecular weight phosphatase family protein	NA	A0A2H4PQT9	Staphylococcus_phage	40.9	4.7e-10
WP_002778517.1|1621507_1621825_-	helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	29.6	1.0e-04
>prophage 133
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1626860	1634869	1754049	transposase	Streptococcus_phage(50.0%)	7	NA	NA
WP_052779075.1|1626860_1628348_-	type I restriction-modification system subunit M	NA	J7I0U9	Acinetobacter_phage	34.0	9.4e-37
WP_151061397.1|1628475_1629744_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RFS3	Helicobacter_phage	62.2	3.0e-140
WP_002782963.1|1629754_1630393_-|transposase	IS607-like element ISChh1 family transposase	transposase	A0A1S5RGS9	Helicobacter_phage	86.8	1.6e-97
WP_002860780.1|1631237_1631585_+	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA	NA
WP_001129922.1|1631983_1632358_+	TnpV protein	NA	D0R0F4	Streptococcus_phage	96.8	6.6e-64
WP_002779752.1|1632724_1634644_+	tetracycline resistance ribosomal protection protein Tet(O)	NA	A0A1B0RXH7	Streptococcus_phage	98.3	0.0e+00
WP_002779755.1|1634695_1634869_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	100.0	4.6e-28
>prophage 134
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1639724	1646762	1754049	transposase	Helicobacter_phage(40.0%)	6	NA	NA
WP_002798739.1|1639724_1642043_-	DEAD/DEAH box helicase	NA	Q5YA94	Bacillus_phage	29.2	5.8e-25
WP_002784160.1|1642176_1643256_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	41.1	1.1e-71
WP_002778497.1|1643256_1643709_-	biotin transporter BioY	NA	A0A167RLA9	Powai_lake_megavirus	35.2	5.2e-15
WP_002785819.1|1643832_1645023_+	MFS transporter	NA	NA	NA	NA	NA
WP_002781049.1|1645072_1645501_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RG71	Helicobacter_phage	76.8	2.3e-57
WP_002781047.1|1645562_1646762_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RG77	Helicobacter_phage	54.7	4.6e-111
>prophage 135
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1654583	1658625	1754049		Bacillus_virus(33.33%)	3	NA	NA
WP_002781015.1|1654583_1655579_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.4	1.8e-12
WP_002779507.1|1655719_1657693_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	36.4	4.2e-77
WP_057043854.1|1657800_1658625_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	45.9	4.5e-57
>prophage 136
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1662377	1665485	1754049		uncultured_virus(50.0%)	4	NA	NA
WP_002780999.1|1662377_1663109_-	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	NA	A0A218MMX0	uncultured_virus	42.2	4.6e-13
WP_002807154.1|1663083_1663833_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_002780995.1|1663829_1664435_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_002780994.1|1664495_1665485_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SQF5	Cyanophage	43.5	9.0e-60
>prophage 137
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1696668	1700602	1754049		Megavirus(50.0%)	5	NA	NA
WP_002781189.1|1696668_1697919_+	adenylosuccinate synthase	NA	A0A2P1EKE7	Megavirus	37.8	3.4e-72
WP_002779340.1|1697915_1698344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002781188.1|1698336_1698855_+	MotE family protein	NA	NA	NA	NA	NA
WP_002781187.1|1698928_1699480_+	DUF507 family protein	NA	NA	NA	NA	NA
WP_002781186.1|1699483_1700602_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	A0A0P0IKJ1	Acinetobacter_phage	28.6	1.3e-06
>prophage 138
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1710343	1713106	1754049		Bacillus_phage(100.0%)	1	NA	NA
WP_002781175.1|1710343_1713106_+	RecB-like helicase	NA	A0A068EQC7	Bacillus_phage	22.6	2.5e-06
>prophage 139
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1721289	1722708	1754049		Vibrio_phage(100.0%)	1	NA	NA
WP_002779315.1|1721289_1722708_+	pilus (MSHA type) biogenesis protein MshL	NA	O80264	Vibrio_phage	25.6	1.8e-16
>prophage 140
NZ_CP044175	Campylobacter coli strain AR-0411 chromosome, complete genome	1754049	1743065	1749876	1754049		Amsacta_moorei_entomopoxvirus(25.0%)	6	NA	NA
WP_002781126.1|1743065_1743728_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	21.1	6.5e-06
WP_002781123.1|1743727_1744846_+	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_002781121.1|1744847_1746506_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002781119.1|1746515_1747463_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	33.4	2.2e-39
WP_032702487.1|1747517_1748666_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	K7YFA0	Megavirus	30.5	1.2e-31
WP_002781110.1|1748652_1749876_+	UDP-N-acetyl-D-mannosamine dehydrogenase	NA	A0A127AXI2	Bacillus_phage	26.5	1.1e-27
