assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008727575.1_ASM872757v1	NZ_CP044203	Salmonella enterica subsp. enterica serovar Senftenberg strain AR-0405 chromosome, complete genome	1	2376403-2378871	1,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,DEDDh,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CCGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,30,29	0	0	NA	NA	I-E:I-E:I-E:I-E	40,40,22,22	40	TypeI-E	DinG,DEDDh,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	NA,NA	NA|254aa|up_9|NZ_CP044203.1_2368269_2369031_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP044203.1_2369011_2370061_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP044203.1_2370057_2370537_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP044203.1_2370536_2371247_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP044203.1_2371265_2371577_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|119aa|up_4|NZ_CP044203.1_2371767_2372124_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP044203.1_2372141_2372747_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NZ_CP044203.1_2372733_2374173_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP044203.1_2374182_2375091_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|NZ_CP044203.1_2375341_2376388_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP044203.1_2378955_2379249_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|NZ_CP044203.1_2379251_2380169_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|235aa|down_2|NZ_CP044203.1_2380168_2380873_-	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|242aa|down_3|NZ_CP044203.1_2380872_2381598_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|355aa|down_4|NZ_CP044203.1_2381607_2382672_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|201aa|down_5|NZ_CP044203.1_2382688_2383291_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|512aa|down_6|NZ_CP044203.1_2383307_2384843_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP044203.1_2385200_2387900_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|318aa|down_8|NZ_CP044203.1_2388283_2389237_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_9|NZ_CP044203.1_2389324_2390059_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_008727575.1_ASM872757v1	NZ_CP044203	Salmonella enterica subsp. enterica serovar Senftenberg strain AR-0405 chromosome, complete genome	2	2395416-2398048	2,2,3,3,3	CRISPRCasFinder,CRT,PILER-CR,CRT,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,DEDDh,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29,29,29	4	4	2396842-2396873|2397879-2397910|2396829-2396860|2397866-2397897	NZ_CP044203.1_2866578-2866547|NZ_CP044203.1_1943846-1943815|NZ_CP044203.1_2866578-2866547|NZ_CP044203.1_1943846-1943815	I-E:I-E:I-E:I-E:I-E	41,42,32,42,41	42	TypeI-E	DinG,DEDDh,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	NA|64aa|up_4|NZ_CP044203.1_2389985_2390177_+,NA	cse2gr11|201aa|up_9|NZ_CP044203.1_2382688_2383291_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|512aa|up_8|NZ_CP044203.1_2383307_2384843_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|up_7|NZ_CP044203.1_2385200_2387900_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|318aa|up_6|NZ_CP044203.1_2388283_2389237_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|up_5|NZ_CP044203.1_2389324_2390059_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|64aa|up_4|NZ_CP044203.1_2389985_2390177_+	NA	NA|571aa|up_3|NZ_CP044203.1_2390133_2391846_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_2|NZ_CP044203.1_2391845_2393645_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|up_1|NZ_CP044203.1_2394068_2394431_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|266aa|up_0|NZ_CP044203.1_2394520_2395318_-	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|224aa|down_0|NZ_CP044203.1_2398344_2399016_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|433aa|down_1|NZ_CP044203.1_2399151_2400450_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_2|NZ_CP044203.1_2400532_2402170_-	PRK05380, pyrG, CTP synthetase; Validated	NA|267aa|down_3|NZ_CP044203.1_2402397_2403198_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|196aa|down_4|NZ_CP044203.1_2403802_2404390_+	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|900aa|down_5|NZ_CP044203.1_2404469_2407169_+	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|258aa|down_6|NZ_CP044203.1_2407181_2407955_+	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|169aa|down_7|NZ_CP044203.1_2407974_2408481_+	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|157aa|down_8|NZ_CP044203.1_2408495_2408966_+	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|179aa|down_9|NZ_CP044203.1_2408962_2409499_+	PRK15260, PRK15260, fimbrial protein SteF; Provisional
