assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008728215.1_ASM872821v1	NZ_CP031695	Erwinia billingiae strain TH88 chromosome, complete genome	1	1834267-1834406	1	CRISPRCasFinder	no	csa3	csa3,cas3,DEDDh,DinG	Type I-A	GGATTCACGGCGACTTTGCGTTCAACGCGCCCTCCCTGACCCGTCA	46	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG	NA,NA|254aa|down_3|NZ_CP031695.1_1837712_1838474_-	NA|229aa|up_9|NZ_CP031695.1_1823833_1824520_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|199aa|up_8|NZ_CP031695.1_1824563_1825160_+	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain	NA|193aa|up_7|NZ_CP031695.1_1825508_1826087_+	pfam04264, YceI, YceI-like domain	NA|182aa|up_6|NZ_CP031695.1_1826540_1827086_+	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases	NA|401aa|up_5|NZ_CP031695.1_1827371_1828574_-	PRK10213, nepI, purine ribonucleoside efflux pump NepI	NA|335aa|up_4|NZ_CP031695.1_1828637_1829642_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|77aa|up_3|NZ_CP031695.1_1830535_1830766_-	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein	NA|325aa|up_2|NZ_CP031695.1_1831494_1832469_-	cd07585, nitrilase_7, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|297aa|up_1|NZ_CP031695.1_1832569_1833460_+	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold	NA|161aa|up_0|NZ_CP031695.1_1833456_1833939_-	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|274aa|down_0|NZ_CP031695.1_1834456_1835278_-	cd02537, GT8_Glycogenin, Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	NA|460aa|down_1|NZ_CP031695.1_1835295_1836675_-	pfam04030, ALO, D-arabinono-1,4-lactone oxidase	NA|212aa|down_2|NZ_CP031695.1_1836844_1837480_-	pfam17938, TetR_C_29, Tetracyclin repressor-like, C-terminal domain	NA|254aa|down_3|NZ_CP031695.1_1837712_1838474_-	NA	NA|312aa|down_4|NZ_CP031695.1_1838674_1839610_-	cd13651, PBP2_ThiY, Substrate binding domain of ABC-type transporters for thiamin biosynthetic pathway intermediates; a member of the type 2 periplasmic binding fold superfamily	NA|256aa|down_5|NZ_CP031695.1_1839635_1840403_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|245aa|down_6|NZ_CP031695.1_1840399_1841134_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_7|NZ_CP031695.1_1841145_1841841_-	cd19367, TenA_C_ScTHI20-like, TenA_C family similar to the C-terminal TenA_C domain of Saccharomyces cerevisiae THI20 protein	NA|425aa|down_8|NZ_CP031695.1_1842129_1843404_-	pfam03573, OprD, outer membrane porin, OprD family	NA|467aa|down_9|NZ_CP031695.1_1843556_1844957_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]
GCF_008728215.1_ASM872821v1	NZ_CP031695	Erwinia billingiae strain TH88 chromosome, complete genome	2	3264778-3264896	2	CRISPRCasFinder	no	DinG	csa3,cas3,DEDDh,DinG	Type IV-A	GTTGTTGTGGAGCTGGGTGGCTGCACAGGTCAAAACC	37	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG	NA,NA	NA|172aa|up_9|NZ_CP031695.1_3254989_3255505_-	PRK09408, ompX, outer membrane protein OmpX	NA|298aa|up_8|NZ_CP031695.1_3255870_3256764_+	PRK10532, PRK10532, threonine and homoserine efflux system; Provisional	NA|168aa|up_7|NZ_CP031695.1_3257150_3257654_+	PRK09448, PRK09448, DNA starvation/stationary phase protection protein Dps; Provisional	NA|88aa|up_6|NZ_CP031695.1_3257742_3258006_+	PRK11019, PRK11019, DksA/TraR family C4-type zinc finger protein	NA|249aa|up_5|NZ_CP031695.1_3258303_3259050_+	PRK09495, glnH, glutamine ABC transporter periplasmic protein; Reviewed	NA|220aa|up_4|NZ_CP031695.1_3259139_3259799_+	PRK09494, glnP, glutamine ABC transporter permease protein; Reviewed	NA|241aa|up_3|NZ_CP031695.1_3259795_3260518_+	PRK09493, glnQ, glutamine ABC transporter ATP-binding protein GlnQ	NA|756aa|up_2|NZ_CP031695.1_3260651_3262919_+	PRK11465, PRK11465, putative mechanosensitive channel protein; Provisional	NA|311aa|up_1|NZ_CP031695.1_3262915_3263848_-	PRK11727, PRK11727, 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF	NA|210aa|up_0|NZ_CP031695.1_3263974_3264604_+	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|501aa|down_0|NZ_CP031695.1_3264955_3266458_-	COG2986, HutH, Histidine ammonia-lyase [Amino acid transport and metabolism]	NA|261aa|down_1|NZ_CP031695.1_3266460_3267243_-	COG4598, HisP, ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]	NA|248aa|down_2|NZ_CP031695.1_3267235_3267979_-	COG4160, ArtM, ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism]	NA|239aa|down_3|NZ_CP031695.1_3267991_3268708_-	COG4215, ArtQ, ABC-type arginine transport system, permease component [Amino acid transport and metabolism]	NA|286aa|down_4|NZ_CP031695.1_3268724_3269582_-	cd13699, PBP2_OccT_like, Substrate binding domain of ABC-type octopine transporter-like; the type 2 periplasmic-binding protein fold	NA|252aa|down_5|NZ_CP031695.1_3270016_3270772_+	TIGR02018, Histidine_utilization_repressor, histidine utilization repressor, proteobacterial	NA|260aa|down_6|NZ_CP031695.1_3270811_3271591_-	TIGR02017, hutG_amidohyd, N-formylglutamate amidohydrolase	NA|407aa|down_7|NZ_CP031695.1_3271587_3272808_-	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|452aa|down_8|NZ_CP031695.1_3272884_3274240_+	PRK09229, PRK09229, N-formimino-L-glutamate deiminase; Validated	NA|183aa|down_9|NZ_CP031695.1_3274236_3274785_+	pfam05962, HutD, HutD
GCF_008728215.1_ASM872821v1	NZ_CP031695	Erwinia billingiae strain TH88 chromosome, complete genome	3	3385746-3385866	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG	Orphan	AATCGCAGAAAGCAAAAAGGCGCCTTTAGGGCGCCTTC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG	NA,NA	NA|251aa|up_9|NZ_CP031695.1_3373900_3374653_+	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA|352aa|up_8|NZ_CP031695.1_3374791_3375847_-	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated	NA|116aa|up_7|NZ_CP031695.1_3376139_3376487_+	pfam13985, YbgS, YbgS-like protein	NA|197aa|up_6|NZ_CP031695.1_3376611_3377202_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|1041aa|up_5|NZ_CP031695.1_3377198_3380321_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|310aa|up_4|NZ_CP031695.1_3380301_3381231_+	PRK03557, PRK03557, CDF family zinc transporter ZitB	NA|240aa|up_3|NZ_CP031695.1_3381227_3381947_-	PRK15397, PRK15397, nicotinamide riboside transporter PnuC; Provisional	NA|348aa|up_2|NZ_CP031695.1_3381981_3383025_-	PRK09375, PRK09375, quinolinate synthase NadA	NA|170aa|up_1|NZ_CP031695.1_3383180_3383690_-	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional	NA|487aa|up_0|NZ_CP031695.1_3383868_3385329_+	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|273aa|down_0|NZ_CP031695.1_3386620_3387439_-	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional	NA|173aa|down_1|NZ_CP031695.1_3387448_3387967_-	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal	NA|431aa|down_2|NZ_CP031695.1_3388011_3389304_-	PRK03629, tolB, Tol-Pal system protein TolB	NA|424aa|down_3|NZ_CP031695.1_3389425_3390697_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|144aa|down_4|NZ_CP031695.1_3390726_3391158_-	PRK11024, PRK11024, colicin uptake protein TolR; Provisional	NA|229aa|down_5|NZ_CP031695.1_3391172_3391859_-	PRK10801, PRK10801, Tol-Pal system protein TolQ	NA|135aa|down_6|NZ_CP031695.1_3391855_3392260_-	PRK10800, PRK10800, acyl-CoA thioesterase YbgC; Provisional	NA|98aa|down_7|NZ_CP031695.1_3392473_3392767_-	PRK10588, PRK10588, hypothetical protein; Provisional	NA|37aa|down_8|NZ_CP031695.1_3392766_3392877_-	COG4890, COG4890, Predicted outer membrane lipoprotein [Function unknown]	NA|380aa|down_9|NZ_CP031695.1_3392892_3394032_-	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II
GCF_008728215.1_ASM872821v1	NZ_CP031695	Erwinia billingiae strain TH88 chromosome, complete genome	4	4089135-4089246	4	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG	Orphan	TCCGGGACGCCGTAAATCCATCCCTGGAGG	30	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG	NA,NA	NA|264aa|up_9|NZ_CP031695.1_4075258_4076050_+	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD	NA|233aa|up_8|NZ_CP031695.1_4076051_4076750_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|1316aa|up_7|NZ_CP031695.1_4077071_4081019_+	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF	NA|652aa|up_6|NZ_CP031695.1_4080993_4082949_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|260aa|up_5|NZ_CP031695.1_4083148_4083928_+	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]	NA|308aa|up_4|NZ_CP031695.1_4083979_4084903_+	cd06301, PBP1_rhizopine_binding-like, periplasmic binding proteins specific to rhizopines	NA|317aa|up_3|NZ_CP031695.1_4084943_4085894_-	cd08479, PBP2_CrgA_like_9, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|305aa|up_2|NZ_CP031695.1_4085925_4086840_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|214aa|up_1|NZ_CP031695.1_4086836_4087478_-	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|479aa|up_0|NZ_CP031695.1_4087464_4088901_-	PRK12466, PRK12466, 3-isopropylmalate dehydratase large subunit	NA|341aa|down_0|NZ_CP031695.1_4089776_4090799_-	cd09269, deoxyribose_mutarotase, deoxyribose mutarotase_like	NA|442aa|down_1|NZ_CP031695.1_4090795_4092121_-	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|305aa|down_2|NZ_CP031695.1_4092134_4093049_-	TIGR02152, Putative_ribokinase, ribokinase	NA|221aa|down_3|NZ_CP031695.1_4093246_4093909_+	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|259aa|down_4|NZ_CP031695.1_4093933_4094710_+	PRK10681, PRK10681, DNA-binding transcriptional repressor DeoR; Provisional	NA|316aa|down_5|NZ_CP031695.1_4094719_4095667_-	cd12175, 2-Hacid_dh_11, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains	NA|556aa|down_6|NZ_CP031695.1_4095927_4097595_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|299aa|down_7|NZ_CP031695.1_4097671_4098568_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|334aa|down_8|NZ_CP031695.1_4098665_4099667_+	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|409aa|down_9|NZ_CP031695.1_4099778_4101005_-	PRK08099, PRK08099, multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR
