assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008761635.1_ASM876163v1	NZ_CP044344	Nocardioides sp. SB3-45 chromosome, complete genome	1	77226-77314	1	CRISPRCasFinder	no	DEDDh	DEDDh,WYL,cas4,casR,cas3,DinG,csa3	Unclear	GGTCGAGTGACCATCTCGGTGGTCGAGCGA	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,casR,cas3,DinG,csa3	NA,NA	NA|409aa|up_9|NZ_CP044344.1_67696_68923_+	TIGR01263, 4-hydroxyphenylpyruvate_dioxygenase, 4-hydroxyphenylpyruvate dioxygenase	NA|603aa|up_8|NZ_CP044344.1_69406_71215_+	PRK09420, cpdB, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA|177aa|up_7|NZ_CP044344.1_71690_72221_+	pfam08002, DUF1697, Protein of unknown function (DUF1697)	NA|258aa|up_6|NZ_CP044344.1_72217_72991_+	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|134aa|up_5|NZ_CP044344.1_72990_73392_+	pfam12680, SnoaL_2, SnoaL-like domain	NA|192aa|up_4|NZ_CP044344.1_73378_73954_-	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase)	NA|428aa|up_3|NZ_CP044344.1_74030_75314_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|98aa|up_2|NZ_CP044344.1_75364_75658_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|194aa|up_1|NZ_CP044344.1_75707_76289_+	pfam09438, DUF2017, Domain of unknown function (DUF2017)	NA|283aa|up_0|NZ_CP044344.1_76366_77215_+	pfam03767, Acid_phosphat_B, HAD superfamily, subfamily IIIB (Acid phosphatase)	NA|156aa|down_0|NZ_CP044344.1_77394_77862_+	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding)	NA|100aa|down_1|NZ_CP044344.1_77851_78151_+	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins	NA|185aa|down_2|NZ_CP044344.1_78147_78702_+	pfam01936, NYN, NYN domain	NA|316aa|down_3|NZ_CP044344.1_78723_79671_+	TIGR01136, Cysteine_synthase, cysteine synthase	NA|328aa|down_4|NZ_CP044344.1_79737_80721_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|271aa|down_5|NZ_CP044344.1_80842_81655_+	PRK00865, PRK00865, glutamate racemase; Provisional	NA|260aa|down_6|NZ_CP044344.1_81651_82431_+	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|311aa|down_7|NZ_CP044344.1_82475_83408_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|268aa|down_8|NZ_CP044344.1_83404_84208_+	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only]	NA|248aa|down_9|NZ_CP044344.1_84227_84971_+	PRK00173, rph, ribonuclease PH; Reviewed
GCF_008761635.1_ASM876163v1	NZ_CP044344	Nocardioides sp. SB3-45 chromosome, complete genome	2	454050-454144	2	CRISPRCasFinder	no		DEDDh,WYL,cas4,casR,cas3,DinG,csa3	Orphan	CCGAAACCGGTCCTGGCTCACCGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,casR,cas3,DinG,csa3	NA|491aa|up_5|NZ_CP044344.1_447406_448879_-,NA|142aa|down_8|NZ_CP044344.1_461133_461559_-	NA|217aa|up_9|NZ_CP044344.1_444247_444898_-	COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion]	NA|324aa|up_8|NZ_CP044344.1_444979_445951_+	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)	NA|149aa|up_7|NZ_CP044344.1_445937_446384_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|343aa|up_6|NZ_CP044344.1_446389_447418_+	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|491aa|up_5|NZ_CP044344.1_447406_448879_-	NA	NA|287aa|up_4|NZ_CP044344.1_448902_449763_-	pfam11296, DUF3097, Protein of unknown function (DUF3097)	NA|337aa|up_3|NZ_CP044344.1_450143_451154_-	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|340aa|up_2|NZ_CP044344.1_451069_452089_+	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|391aa|up_1|NZ_CP044344.1_452093_453266_+	PRK14278, PRK14278, chaperone protein DnaJ; Provisional	NA|247aa|up_0|NZ_CP044344.1_453271_454012_+	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional	NA|351aa|down_0|NZ_CP044344.1_454149_455202_-	pfam10648, Gmad2, Immunoglobulin-like domain of bacterial spore germination	NA|177aa|down_1|NZ_CP044344.1_455198_455729_-	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|117aa|down_2|NZ_CP044344.1_455820_456171_+	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides	NA|392aa|down_3|NZ_CP044344.1_456167_457343_+	pfam01082, Cu2_monooxygen, Copper type II ascorbate-dependent monooxygenase, N-terminal domain	NA|338aa|down_4|NZ_CP044344.1_457405_458419_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|151aa|down_5|NZ_CP044344.1_458433_458886_+	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|430aa|down_6|NZ_CP044344.1_458894_460184_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|297aa|down_7|NZ_CP044344.1_460221_461112_-	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|142aa|down_8|NZ_CP044344.1_461133_461559_-	NA	NA|100aa|down_9|NZ_CP044344.1_461594_461894_-	pfam13769, Virulence_fact, Virulence factor
GCF_008761635.1_ASM876163v1	NZ_CP044344	Nocardioides sp. SB3-45 chromosome, complete genome	3	2431952-2432034	3	CRISPRCasFinder	no		DEDDh,WYL,cas4,casR,cas3,DinG,csa3	Orphan	CCGCTCGACCACCGAGGGCCGCTCGACCA	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,casR,cas3,DinG,csa3	NA|165aa|up_9|NZ_CP044344.1_2420343_2420838_+,NA|323aa|up_7|NZ_CP044344.1_2422821_2423790_+,NA|154aa|up_0|NZ_CP044344.1_2430836_2431298_+,NA|95aa|down_1|NZ_CP044344.1_2435173_2435458_+,NA|80aa|down_4|NZ_CP044344.1_2436237_2436477_+,NA|106aa|down_5|NZ_CP044344.1_2436473_2436791_+	NA|165aa|up_9|NZ_CP044344.1_2420343_2420838_+	NA	NA|442aa|up_8|NZ_CP044344.1_2420961_2422287_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|323aa|up_7|NZ_CP044344.1_2422821_2423790_+	NA	NA|825aa|up_6|NZ_CP044344.1_2423878_2426353_+	COG0404, GcvT, Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]	NA|307aa|up_5|NZ_CP044344.1_2426413_2427334_-	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|259aa|up_4|NZ_CP044344.1_2427398_2428175_-	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs	NA|217aa|up_3|NZ_CP044344.1_2428205_2428856_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|491aa|up_2|NZ_CP044344.1_2428874_2430347_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|134aa|up_1|NZ_CP044344.1_2430379_2430781_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|154aa|up_0|NZ_CP044344.1_2430836_2431298_+	NA	NA|309aa|down_0|NZ_CP044344.1_2434199_2435126_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|95aa|down_1|NZ_CP044344.1_2435173_2435458_+	NA	NA|60aa|down_2|NZ_CP044344.1_2435557_2435737_+	pfam14013, MT0933_antitox, MT0933-like antitoxin protein	NA|152aa|down_3|NZ_CP044344.1_2435748_2436204_+	cd04683, Nudix_Hydrolase_24, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|80aa|down_4|NZ_CP044344.1_2436237_2436477_+	NA	NA|106aa|down_5|NZ_CP044344.1_2436473_2436791_+	NA	NA|496aa|down_6|NZ_CP044344.1_2436923_2438411_-	PRK14326, PRK14326, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|510aa|down_7|NZ_CP044344.1_2438444_2439974_+	cd07432, PHP_HisPPase, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase	NA|158aa|down_8|NZ_CP044344.1_2440057_2440531_-	pfam14539, DUF4442, Domain of unknown function (DUF4442)	NA|124aa|down_9|NZ_CP044344.1_2440579_2440951_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains
GCF_008761635.1_ASM876163v1	NZ_CP044344	Nocardioides sp. SB3-45 chromosome, complete genome	4	3893508-3893623	4	CRISPRCasFinder	no		DEDDh,WYL,cas4,casR,cas3,DinG,csa3	Orphan	GACCGACGCGCGCTCTCGCTTCGCTCACGG	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,casR,cas3,DinG,csa3	NA,NA|214aa|down_0|NZ_CP044344.1_3894827_3895469_+,NA|222aa|down_1|NZ_CP044344.1_3895524_3896190_+,NA|143aa|down_5|NZ_CP044344.1_3898638_3899067_+,NA|123aa|down_6|NZ_CP044344.1_3899045_3899414_-,NA|254aa|down_9|NZ_CP044344.1_3901248_3902010_+	NA|279aa|up_9|NZ_CP044344.1_3885271_3886108_-	TIGR02141, modB_ABC, molybdate ABC transporter, permease protein	NA|250aa|up_8|NZ_CP044344.1_3886104_3886854_-	cd13538, PBP2_ModA_like_1, Substrate binding domain of putative molybdate-binding protein;the type 2 periplasmic binding protein fold	NA|131aa|up_7|NZ_CP044344.1_3886850_3887243_-	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins	NA|412aa|up_6|NZ_CP044344.1_3887310_3888546_-	cd01118, ArsB_permease, Anion permease ArsB	NA|198aa|up_5|NZ_CP044344.1_3888572_3889166_+	pfam14030, DUF4245, Protein of unknown function (DUF4245)	NA|68aa|up_4|NZ_CP044344.1_3889172_3889376_-	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional	NA|415aa|up_3|NZ_CP044344.1_3889372_3890617_-	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit	NA|329aa|up_2|NZ_CP044344.1_3890660_3891647_+	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|207aa|up_1|NZ_CP044344.1_3891747_3892368_-	pfam04138, GtrA, GtrA-like protein	NA|208aa|up_0|NZ_CP044344.1_3892452_3893076_+	PRK11630, PRK11630, threonylcarbamoyl-AMP synthase	NA|214aa|down_0|NZ_CP044344.1_3894827_3895469_+	NA	NA|222aa|down_1|NZ_CP044344.1_3895524_3896190_+	NA	NA|257aa|down_2|NZ_CP044344.1_3896196_3896967_-	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|266aa|down_3|NZ_CP044344.1_3897005_3897803_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|184aa|down_4|NZ_CP044344.1_3897912_3898464_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|143aa|down_5|NZ_CP044344.1_3898638_3899067_+	NA	NA|123aa|down_6|NZ_CP044344.1_3899045_3899414_-	NA	NA|359aa|down_7|NZ_CP044344.1_3899492_3900569_+	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|163aa|down_8|NZ_CP044344.1_3900679_3901168_+	cd09170, PLDc_Nuc, Catalytic domain of EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins	NA|254aa|down_9|NZ_CP044344.1_3901248_3902010_+	NA
