The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP031700	Neisseria zalophi strain ATCC BAA-2455 chromosome, complete genome	2423693	1321643	1369647	2423693	plate,transposase	uncultured_Caudovirales_phage(70.0%)	34	NA	NA
WP_151051159.1|1321643_1321844_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	45.5	2.8e-05
WP_151051161.1|1322062_1322287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151051162.1|1322593_1323499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151051164.1|1323538_1323931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151051167.1|1324361_1324637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151051169.1|1325844_1326336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151051171.1|1326329_1330553_-	RHS repeat protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	35.4	1.2e-25
WP_151051173.1|1330832_1331420_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_151051175.1|1331428_1332496_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_151051177.1|1332556_1333075_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_151051179.1|1333116_1334613_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_151051181.1|1334688_1335171_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_151051183.1|1335302_1336118_+	ImpE protein	NA	NA	NA	NA	NA
WP_151051185.1|1336146_1336659_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_151051187.1|1336651_1338625_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_151051189.1|1338621_1339659_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_151051191.1|1339744_1342381_+	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	31.5	1.6e-79
WP_151051193.1|1342519_1343146_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_151051195.1|1343178_1344522_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_151051197.1|1344545_1345799_+	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_151051199.1|1345851_1349409_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_151051201.1|1349508_1351782_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	22.3	8.2e-24
WP_151051203.1|1351800_1352967_+	DUF2169 domain-containing protein	NA	NA	NA	NA	NA
WP_151051205.1|1353018_1357311_+	DUF4150 domain-containing protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	37.1	1.4e-27
WP_151051206.1|1357953_1362105_+	DUF4150 domain-containing protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	35.3	1.6e-25
WP_151051208.1|1362121_1362562_+	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_151051210.1|1362610_1363606_+	RHS repeat protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	46.0	2.0e-27
WP_151051212.1|1363626_1363950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053002.1|1364020_1365388_+	hypothetical protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	37.1	7.3e-28
WP_151051214.1|1366091_1367210_+	hypothetical protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	36.9	9.3e-29
WP_151053003.1|1367276_1367450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053004.1|1367472_1367967_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_151053005.1|1368230_1368596_+	RHS repeat protein	NA	NA	NA	NA	NA
WP_151049983.1|1368639_1369647_+|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	27.8	1.7e-18
>prophage 2
NZ_CP031700	Neisseria zalophi strain ATCC BAA-2455 chromosome, complete genome	2423693	1566548	1613236	2423693	protease,transposase	Agrobacterium_phage(15.38%)	46	NA	NA
WP_151053018.1|1566548_1566647_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_151051557.1|1566618_1566795_-|transposase	transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	57.8	2.6e-07
WP_151051559.1|1566954_1567797_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_151053019.1|1568127_1570698_+	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_151051561.1|1570966_1571968_+	bile acid:sodium symporter family protein	NA	NA	NA	NA	NA
WP_151051563.1|1572190_1573537_+	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	37.3	1.3e-29
WP_151051565.1|1573526_1573790_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_151051567.1|1573827_1574742_-	DMT family transporter	NA	NA	NA	NA	NA
WP_151051569.1|1574839_1575745_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_151051570.1|1575805_1576642_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_151051572.1|1577009_1577918_+	recombination-associated protein RdgC	NA	L7TP07	Pseudomonas_virus	35.8	6.8e-46
WP_151051575.1|1578022_1578589_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	72.0	7.4e-75
WP_151051577.1|1578727_1579498_+	J domain-containing protein	NA	NA	NA	NA	NA
WP_151051579.1|1579666_1583656_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_151051581.1|1583652_1585671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151051583.1|1585663_1586188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151051585.1|1586211_1587342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151051587.1|1587358_1589182_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2L0V0F4	Agrobacterium_phage	36.0	2.2e-40
WP_151051589.1|1589191_1589776_+	radical SAM protein	NA	A0A1Z1LYX8	Serratia_phage	30.1	1.5e-06
WP_151051591.1|1589884_1590394_-	single-stranded DNA-binding protein	NA	F8TUL2	EBPR_podovirus	63.0	2.0e-39
WP_151051593.1|1590377_1591778_-	MFS transporter	NA	NA	NA	NA	NA
WP_151051595.1|1591902_1592532_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_151051597.1|1592658_1595961_-	cell division protein FtsK	NA	G1FGP1	Mycobacterium_phage	49.1	2.1e-84
WP_151051599.1|1596268_1597147_+	cupin-like domain-containing protein	NA	NA	NA	NA	NA
WP_151051601.1|1597255_1598002_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	31.8	2.7e-24
WP_151051604.1|1598008_1598563_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_151051606.1|1598567_1598765_-	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA	NA
WP_151053020.1|1598821_1599145_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
WP_151051608.1|1599275_1599599_-	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA	NA
WP_151051610.1|1599696_1600101_-	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
WP_151051612.1|1600256_1601015_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_151051614.1|1601048_1601594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151051616.1|1601643_1602411_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA	NA
WP_151051618.1|1602521_1602839_-	multidrug transporter MatE	NA	NA	NA	NA	NA
WP_151051620.1|1602958_1603708_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA	NA
WP_151051622.1|1603810_1604455_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
WP_151051624.1|1604658_1605852_+	succinyldiaminopimelate transaminase	NA	NA	NA	NA	NA
WP_151051626.1|1606097_1606880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151051628.1|1606899_1608465_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	1.1e-22
WP_151053021.1|1608603_1608942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151051630.1|1609059_1609506_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	50.0	4.1e-28
WP_151051632.1|1609571_1609790_-	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_151051634.1|1609824_1610034_-	branched-chain amino acid ABC transporter	NA	NA	NA	NA	NA
WP_003682902.1|1610181_1610385_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	78.8	2.6e-22
WP_151051636.1|1610626_1610941_+|protease	ATP-dependent Clp protease adapter ClpS	protease	NA	NA	NA	NA
WP_151051638.1|1610941_1613236_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	2.4e-164
>prophage 3
NZ_CP031700	Neisseria zalophi strain ATCC BAA-2455 chromosome, complete genome	2423693	1656374	1664385	2423693		Indivirus(16.67%)	8	NA	NA
WP_151051714.1|1656374_1657169_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	3.2e-07
WP_151051716.1|1657165_1658071_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_151051718.1|1658210_1659212_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_151051720.1|1659505_1660138_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1V0DYC7	Dinoroseobacter_phage	34.0	4.3e-15
WP_151051722.1|1660177_1660489_-	2Fe-2S ferredoxin-like protein	NA	G9IAA2	Pseudomonas_phage	57.6	6.8e-14
WP_151053024.1|1660680_1661814_-	ribonucleotide-diphosphate reductase subunit beta	NA	W6AT53	Erwinia_phage	74.5	1.4e-162
WP_151051723.1|1661859_1662087_-	DUF2188 domain-containing protein	NA	E8ZD70	Streptococcus_phage	54.8	1.3e-14
WP_151051724.1|1662105_1664385_-	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	67.2	2.4e-302
>prophage 4
NZ_CP031700	Neisseria zalophi strain ATCC BAA-2455 chromosome, complete genome	2423693	2392226	2400250	2423693	tRNA,transposase	Erwinia_phage(16.67%)	7	NA	NA
WP_151052888.1|2392226_2392679_+	dUTP diphosphatase	NA	G0YQD9	Erwinia_phage	70.6	1.2e-48
WP_151052889.1|2392865_2393693_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	A0A127AWE5	Bacillus_phage	25.3	3.9e-16
WP_151052890.1|2393833_2395132_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1L2CUL7	Pectobacterium_phage	42.9	7.3e-86
WP_151052891.1|2395351_2397214_-	acyltransferase	NA	W6MVL2	Pseudomonas_phage	29.5	7.3e-55
WP_151052892.1|2397491_2398499_+|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	27.8	8.6e-18
WP_151052893.1|2398676_2398949_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_151052894.1|2398963_2400250_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	62.1	1.4e-145
