The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP032672	Listeria monocytogenes strain 52854 chromosome, complete genome	2915525	123380	129907	2915525	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003728215.1|123380_123833_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|123838_124174_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003724946.1|124390_124819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003724947.1|124830_125247_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	1.3e-20
WP_003728212.1|125526_125916_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003721744.1|125928_126441_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|126488_126791_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003740367.1|126832_127237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003731178.1|127223_129092_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003724951.1|129088_129907_+|tail	phage tail family protein	tail	A0A2H4JAE4	uncultured_Caudovirales_phage	34.9	1.7e-40
>prophage 2
NZ_CP032672	Listeria monocytogenes strain 52854 chromosome, complete genome	2915525	1272689	1329541	2915525	protease,tRNA	Bacillus_virus(16.67%)	57	NA	NA
WP_003734523.1|1272689_1273829_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1273908_1274304_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1274454_1274670_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003727523.1|1274793_1275327_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003731300.1|1275342_1276008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003727521.1|1276269_1277208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1277322_1278606_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1278790_1280050_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003726393.1|1280168_1280735_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003726394.1|1280769_1281339_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003727520.1|1281440_1281983_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003726396.1|1281992_1282856_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003727519.1|1282852_1283638_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
WP_012681270.1|1283771_1284632_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003727517.1|1284904_1286983_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
WP_003726401.1|1287045_1288350_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_003731303.1|1288632_1289535_+	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
WP_003724001.1|1289555_1290095_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003727514.1|1290108_1291518_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.8	7.5e-44
WP_003726695.1|1291538_1292318_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003727512.1|1292294_1292489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003726696.1|1292420_1292840_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1292862_1293174_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003726697.1|1293176_1294049_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003726698.1|1294090_1294687_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003727511.1|1294844_1295252_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003727510.1|1295432_1297400_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
WP_003727509.1|1297396_1299856_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.8	1.1e-101
WP_003726814.1|1299938_1300406_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_009917681.1|1301033_1302854_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003727507.1|1302886_1304773_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.2	3.8e-43
WP_003726657.1|1304985_1305684_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
WP_003723738.1|1305916_1307593_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_003726658.1|1307719_1308637_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1308758_1308992_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_012681271.1|1309102_1310326_+	GTPase HflX	NA	NA	NA	NA	NA
WP_003727505.1|1310318_1311545_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1311746_1312115_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1312185_1313520_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_003726564.1|1313663_1314959_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	2.5e-147
WP_003726565.1|1314992_1315517_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1315547_1316162_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003726566.1|1316318_1316648_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003726567.1|1316741_1316969_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003734516.1|1317115_1319110_+	transketolase	NA	NA	NA	NA	NA
WP_003726667.1|1319330_1319570_+	YneF family protein	NA	NA	NA	NA	NA
WP_003726668.1|1319618_1320350_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
WP_003726669.1|1320371_1320878_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
WP_003727499.1|1320887_1322192_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	1.2e-133
WP_012681273.1|1322181_1323387_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	7.0e-91
WP_003727498.1|1323364_1323739_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1324031_1324760_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1324759_1325317_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003727497.1|1325547_1326306_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003727496.1|1326319_1327108_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003726414.1|1327122_1328265_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003726415.1|1328278_1329541_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 3
NZ_CP032672	Listeria monocytogenes strain 52854 chromosome, complete genome	2915525	1823951	1832237	2915525		Synechococcus_phage(33.33%)	8	NA	NA
WP_003726209.1|1823951_1824518_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	8.3e-26
WP_003726210.1|1824514_1825564_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
WP_003722245.1|1825582_1827010_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_003731570.1|1826994_1829214_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.8	6.5e-159
WP_003726212.1|1829206_1829890_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1829893_1830139_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003726214.1|1830150_1830864_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	2.0e-40
WP_003729814.1|1830944_1832237_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 4
NZ_CP032672	Listeria monocytogenes strain 52854 chromosome, complete genome	2915525	2514833	2522678	2915525		Streptococcus_phage(50.0%)	7	NA	NA
WP_003725407.1|2514833_2515805_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_070287176.1|2515812_2516781_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.6	2.3e-68
WP_003722606.1|2516782_2517658_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003725409.1|2517765_2519496_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.1	9.5e-174
WP_003741152.1|2519537_2520599_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_003725411.1|2520615_2521599_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
WP_003722610.1|2521718_2522678_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
