The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP042530	Klebsiella aerogenes strain C9 chromosome, complete genome	5034705	2065087	2115307	5034705	integrase,lysis,bacteriocin,terminase,tail	Salmonella_phage(23.81%)	67	2066267:2066283	2110803:2110819
WP_015366242.1|2065087_2065897_-	peptide ABC transporter ATP-binding protein SapF	NA	G3M9Y6	Bacillus_virus	27.0	6.1e-14
WP_015366243.1|2065898_2066891_-	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	26.1	1.6e-08
2066267:2066283	attL	TGTTATTCTGGTTGAGC	NA	NA	NA	NA
WP_058675498.1|2066890_2067781_-	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
WP_072205591.1|2067957_2069145_+|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	52.4	2.7e-119
WP_072057790.1|2069041_2069338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059304758.1|2069482_2069695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584710.1|2069767_2070415_-	hypothetical protein	NA	M1F3E2	Salmonella_phage	59.1	3.2e-66
WP_151584713.1|2070626_2071748_-	site-specific DNA-methyltransferase	NA	A0A1P8DTZ3	Salmonella_phage	51.8	3.1e-101
WP_151584716.1|2071761_2072046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151584718.1|2072060_2072576_-	single-stranded DNA-binding protein	NA	C6ZR36	Salmonella_phage	68.4	2.0e-63
WP_151584721.1|2072572_2073445_-	AAA family ATPase	NA	A0A1B1P9H8	Acinetobacter_phage	50.6	3.0e-59
WP_015705910.1|2073935_2074250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584724.1|2074218_2074461_-	cell division inhibitor protein	NA	K7P6H3	Enterobacteria_phage	77.9	1.0e-25
WP_142689011.1|2075256_2076084_-	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
WP_142689012.1|2076080_2076830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142689013.1|2076927_2077047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063414861.1|2077095_2077791_-	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	67.4	2.4e-83
WP_015705720.1|2077895_2078126_+	helix-turn-helix domain-containing protein	NA	A0A2H4FNF3	Salmonella_phage	68.9	4.5e-23
WP_151584727.1|2078220_2078763_+	regulator	NA	M9NZI6	Enterobacteria_phage	73.3	1.9e-67
WP_151584730.1|2078947_2079880_+	replication protein	NA	A0A077KB11	Edwardsiella_phage	79.5	1.3e-55
WP_151584733.1|2079876_2080578_+	Replication protein P	NA	A0A0M3ULE2	Salmonella_phage	79.6	1.1e-101
WP_151584736.1|2080574_2080868_+	protein ren	NA	M1FPD5	Enterobacteria_phage	59.1	9.8e-23
WP_151584739.1|2080864_2081548_+	hypothetical protein	NA	Q858D1	Salmonella_phage	76.1	1.0e-30
WP_151584742.1|2081544_2081781_+	hypothetical protein	NA	S4TVX5	Salmonella_phage	50.0	1.9e-13
WP_151584745.1|2081773_2081959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584748.1|2081951_2082194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584751.1|2082397_2083543_+|tail	tail fiber domain-containing protein	tail	A0A1Z1LXX7	Serratia_phage	27.8	3.2e-16
WP_151585728.1|2083829_2085947_+	colicin-D	NA	NA	NA	NA	NA
WP_047037020.1|2085943_2086216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584754.1|2086436_2086694_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_151584757.1|2087143_2087692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584760.1|2087717_2088851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151584763.1|2089759_2089930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584766.1|2089922_2090504_+	recombination protein NinG	NA	E7C9S3	Salmonella_phage	42.8	3.3e-38
WP_047075685.1|2090500_2090641_+	YlcG family protein	NA	NA	NA	NA	NA
WP_151584769.1|2090637_2091327_+	antiterminator	NA	I6PDF8	Cronobacter_phage	54.9	1.5e-61
WP_151584772.1|2091400_2091688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015705891.1|2091865_2091961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015705890.1|2092107_2092332_+|lysis	lysis S family protein	lysis	M9NZI9	Enterobacteria_phage	89.2	5.7e-31
WP_063402620.1|2092309_2092804_+	lysozyme	NA	M9P0E5	Enterobacteria_phage	93.9	7.3e-87
WP_151584777.1|2092800_2093262_+|lysis	lysis protein	lysis	M9NYX9	Enterobacteria_phage	68.0	4.8e-48
WP_151584780.1|2094208_2094508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114268417.1|2094991_2095249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584783.1|2095315_2096308_+|terminase	terminase small subunit	terminase	A0A0U2RXW9	Escherichia_phage	34.5	1.1e-28
WP_151584786.1|2096285_2097593_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	58.9	6.1e-149
WP_151584789.1|2097592_2098993_+	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	53.0	1.6e-126
WP_151584792.1|2098976_2100089_+	hypothetical protein	NA	I6PD76	Cronobacter_phage	54.4	1.8e-109
WP_151584795.1|2100174_2100960_+	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	64.8	1.7e-69
WP_151584798.1|2100970_2101924_+	hypothetical protein	NA	A0A1B0VMF8	Pseudomonas_phage	73.7	1.9e-131
WP_151584801.1|2101932_2102205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047052256.1|2102245_2102641_+	hypothetical protein	NA	A0A0S2SYB7	Pseudomonas_phage	43.3	7.3e-13
WP_042896379.1|2102642_2102897_+	hypothetical protein	NA	J9Q7U0	Salmonella_phage	54.8	5.5e-22
WP_058674196.1|2102906_2103140_+	hypothetical protein	NA	A0A2H4J0Y9	uncultured_Caudovirales_phage	48.5	2.6e-10
WP_151584804.1|2103126_2103510_+	glutamate 5-kinase	NA	A0A0S2SYG4	Pseudomonas_phage	43.7	6.0e-20
WP_151584807.1|2103511_2104063_+	hypothetical protein	NA	G8C7Q1	Escherichia_phage	39.1	3.3e-27
WP_151584810.1|2104059_2104452_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_151584813.1|2104475_2105648_+	Ig domain-containing protein	NA	A0A0D4DBN5	Acinetobacter_phage	27.9	1.9e-24
WP_032712206.1|2105702_2106185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151585731.1|2106322_2106520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151584816.1|2107015_2107231_+	hypothetical protein	NA	W6AT49	Erwinia_phage	56.1	3.0e-13
WP_047053439.1|2107319_2107676_+	hypothetical protein	NA	A0A1V0E5P9	Salmonella_phage	75.0	2.5e-44
WP_151585734.1|2107786_2108155_+	zinc ribbon domain-containing protein	NA	I6PDJ9	Cronobacter_phage	53.8	1.1e-15
WP_151584819.1|2108226_2110929_+|tail	phage tail protein	tail	A0A192Y7S1	Enterobacteria_phage	33.5	5.4e-83
2110803:2110819	attR	GCTCAACCAGAATAACA	NA	NA	NA	NA
WP_151584822.1|2110930_2111404_+	hypothetical protein	NA	A0A286S298	Klebsiella_phage	66.4	2.0e-57
WP_151584825.1|2111390_2111873_+	DUF1833 domain-containing protein	NA	A0A286S2B1	Klebsiella_phage	72.5	3.9e-61
WP_151584828.1|2111882_2112263_+	nitrite transporter	NA	A0A286S2A6	Klebsiella_phage	81.0	7.9e-57
WP_151585737.1|2112760_2115307_+	kinase	NA	A0A286S259	Klebsiella_phage	70.1	0.0e+00
>prophage 1
NZ_CP042532	Klebsiella aerogenes strain C9 plasmid pC9_002, complete sequence	88956	2110	36530	88956	protease,transposase,integrase	Escherichia_phage(37.5%)	39	1913:1972	22534:23488
1913:1972	attL	GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC	NA	NA	NA	NA
WP_001067834.1|2110_2815_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	3.1e-139
WP_014344500.1|2848_3121_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000845039.1|3089_4103_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_015060105.1|4255_4996_+	subclass B1 metallo-beta-lactamase IMP-4	NA	NA	NA	NA	NA
WP_015063357.1|5227_5560_+	quaternary ammonium compound efflux SMR transporter QacG2	NA	NA	NA	NA	NA
WP_003159191.1|5686_6241_+	aminoglycoside N-acetyltransferase AAC(6')-Ib4	NA	NA	NA	NA	NA
WP_000186237.1|6335_6968_+	type B-3 chloramphenicol O-acetyltransferase CatB3	NA	A0A2R8FE91	Brazilian_cedratvirus	41.2	4.1e-26
WP_000679427.1|7124_7472_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_000259031.1|7465_8305_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000050481.1|8709_10251_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_003833285.1|11557_12010_+	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA	NA
WP_012695489.1|12051_12696_-	quinolone resistance pentapeptide repeat protein QnrB2	NA	NA	NA	NA	NA
WP_000259031.1|13186_14026_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_001993321.1|13955_14135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004883563.1|14153_14426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000427614.1|14607_15612_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
WP_000184001.1|15839_17045_+	chromate efflux transporter	NA	NA	NA	NA	NA
WP_000130000.1|17055_17361_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_024143553.1|17376_17559_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001389365.1|17587_18352_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_001336397.1|18542_18899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001137892.1|18844_19429_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000004159.1|19428_20667_-	MFS transporter	NA	NA	NA	NA	NA
WP_000219391.1|20663_21569_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
WP_001067834.1|21690_22395_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	3.1e-139
WP_000557454.1|22627_23488_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA	NA
22534:23488	attR	GATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTATAGTGTTTTGCAGTTTAGAGGAGATATCGCGATGCATACGCGGAAGGCAATAACGGAGGCGCTTCAAAAACTCGGAGTCCAAACCGGTGACCTCTTGATGGTGCATGCCTCACTTAAAGCGATTGGTCCGGTCGAAGGAGGAGCGGAGACGGTCGTTGCCGCGTTACGCTCCGCGGTTGGGCCGACTGGCACTGTGATGGGATACGCGTCGTGGGACCGATCACCCTACGAGGAGACTCTGAATGGCGCTCGGCTGGATGACGAAGCCCGCCGTACCTGGCTGCCGTTCGATCCCGCAACAGCCGGGACTTACCGTGGGTTCGGCCTGCTGAATCAATTTCTGGTTCAAGCCCCCGGCGCGCGGCGCAGCGCGCACCCCGATGCATCGATGGTCGCGGTTGGTCCGCTGGCTGAAACGCTGACGGAGCCTCACGAACTCGGTCACGCCTTGGGGGAAGGATCGCCCGTCGAGCGGTTCGTTCGCCTTGGCGGGAAGGCCCTGCTGTTGGGTGCGCCGCTAAACTCCGTTACCGCATTGCACTACGCCGAGGCGGTTGCCGATATCCCCAACAAACGGTGGGTGACGTATGAGATGCCGATGCTTGGAAGAGACGGTGAAGTCGCCTGGAAAACGGCATCGGATTACGATTCAAACGGCATTCTCGATTGCTTTGCTATCGAAGGAAAGCCGGATGCGGTTGAAACTATAGCAAATGCTTACGTGAAGCTCGGTCGCCATCGAGAAGGTGTCGTGGGCTTTGCTCAGTGCTACCTGTTCGACGCGCAGGACATCGTGACGTTCGGCGTCACCTATCTTGAGAAGCATTTCGGAACCACTCCGATCGTGCCTCCGCACGAGGCCGTCGAGCGCTCTTGCGAGCCTTCAGGTTAG	NA	NA	NA	NA
WP_000587837.1|23500_24043_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_000951934.1|24524_24716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001330846.1|24721_24967_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000080861.1|25017_26154_+	DUF3883 domain-containing protein	NA	NA	NA	NA	NA
WP_000971921.1|26268_27639_+|transposase	IS1182-like element ISCfr1 family transposase	transposase	NA	NA	NA	NA
WP_000027057.1|28459_29320_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_011091091.1|29988_30498_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_011091092.1|30545_32633_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012579091.1|32645_33596_-	DsbC family protein	NA	NA	NA	NA	NA
WP_045626305.1|33606_34869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077256341.1|34913_35189_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_045626302.1|35413_35797_-	DUF1496 domain-containing protein	NA	NA	NA	NA	NA
WP_011091025.1|35876_36530_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
