The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	0	4785	4639229		Staphylococcus_phage(50.0%)	4	NA	NA
WP_001301979.1|967_1387_+	D-ribose pyranase	NA	NA	NA	NA	NA
WP_000387770.1|1394_2900_+	ribose ABC transporter ATP-binding protein RbsA	NA	A0A2H4PQG7	Staphylococcus_phage	27.1	6.0e-15
WP_000211858.1|2904_3870_+	ribose ABC transporter permease	NA	NA	NA	NA	NA
WP_001056271.1|3894_4785_+	ribose ABC transporter substrate-binding protein RbsB	NA	C6ZCU4	Enterobacteria_phage	23.4	2.5e-05
>prophage 2
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	28293	33707	4639229		Bacillus_phage(33.33%)	4	NA	NA
WP_001238899.1|28293_30315_+	DNA helicase Rep	NA	A7KV33	Bacillus_phage	37.6	2.2e-113
WP_001295254.1|30361_31846_-	guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA	NA	NA	NA	NA
WP_000047499.1|31981_33247_-	ATP-dependent RNA helicase RhlB	NA	E3T5E1	Cafeteria_roenbergensis_virus	31.2	3.1e-41
WP_001280776.1|33377_33707_+	thioredoxin TrxA	NA	A0A1V0SD63	Indivirus	38.5	4.2e-14
>prophage 3
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	37749	43893	4639229		Enterobacteria_phage(40.0%)	6	NA	NA
WP_001340422.1|37749_38880_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	32.8	3.9e-27
WP_000006621.1|38876_40139_+	UDP-N-acetyl-D-mannosamine dehydrogenase	NA	M1HNJ7	Paramecium_bursaria_Chlorella_virus	27.0	1.0e-23
WP_001226601.1|40138_41206_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.4	2.3e-101
WP_000676056.1|41224_42106_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	66.3	8.7e-107
WP_001145183.1|42083_42758_+	dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase	NA	NA	NA	NA	NA
WP_000612043.1|42762_43893_+	dTDP-4-amino-4,6-dideoxygalactose transaminase	NA	A0A0F7LAY0	uncultured_marine_virus	41.7	2.0e-18
>prophage 4
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	51968	53624	4639229		Tetraselmis_virus(100.0%)	1	NA	NA
WP_000395863.1|51968_53624_-	arylsulfatase AslA	NA	A0A2P0VMN7	Tetraselmis_virus	29.7	2.3e-44
>prophage 5
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	63903	67762	4639229		Bacillus_phage(100.0%)	3	NA	NA
WP_000130691.1|63903_64800_+	tyrosine recombinase XerC	NA	A0A142F1N9	Bacillus_phage	29.6	3.8e-25
WP_001213584.1|64799_65516_+	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB	NA	NA	NA	NA	NA
WP_000383406.1|65599_67762_+	DNA helicase II	NA	A7KV33	Bacillus_phage	37.2	4.6e-117
>prophage 6
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	73480	75310	4639229		Catovirus(100.0%)	1	NA	NA
WP_000035581.1|73480_75310_+	ATP-dependent DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	37.8	7.4e-84
>prophage 7
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	87842	91129	4639229		Ostreococcus_lucimarinus_virus(50.0%)	4	NA	NA
WP_000187530.1|87842_89483_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	M4R0M8	Ostreococcus_lucimarinus_virus	29.0	8.2e-42
WP_001295260.1|89561_89831_+	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA	NA
WP_000459594.1|89834_90350_+	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA	NA
WP_000109943.1|90352_91129_+	Sec-independent protein translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	32.6	5.1e-26
>prophage 8
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	100108	100723	4639229		Streptococcus_phage(100.0%)	1	NA	NA
WP_001308167.1|100108_100723_+	IMPACT family protein	NA	A0A1X9I5T8	Streptococcus_phage	33.0	2.8e-19
>prophage 9
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	114582	117369	4639229		uncultured_virus(100.0%)	1	NA	NA
WP_000250006.1|114582_117369_+	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	32.1	1.7e-71
>prophage 10
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	121485	123956	4639229		Bacillus_thuringiensis_phage(50.0%)	2	NA	NA
WP_001188777.1|121485_122895_-	nitrogen regulation protein NR(I)	NA	Q56AR1	Bacillus_thuringiensis_phage	28.7	2.4e-05
WP_000190577.1|122906_123956_-	nitrogen regulation protein NR(II)	NA	Q8QKV7	Ectocarpus_siliculosus_virus	26.1	2.5e-07
>prophage 11
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	140291	143071	4639229		Staphylococcus_phage(50.0%)	3	NA	NA
WP_000718893.1|140291_141188_-	sulfolactaldehyde 3-reductase	NA	D2K0C8	Staphylococcus_phage	90.7	1.3e-60
WP_000621656.1|141355_142252_+	sulfofructose kinase	NA	NA	NA	NA	NA
WP_000059678.1|142285_143071_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.9	8.2e-24
>prophage 12
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	150388	153439	4639229		Escherichia_phage(100.0%)	1	NA	NA
WP_010723259.1|150388_153439_-	formate dehydrogenase-N subunit alpha	NA	A0A077SK27	Escherichia_phage	23.8	1.1e-07
>prophage 13
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	164994	169855	4639229		Bacillus_thuringiensis_phage(33.33%)	5	NA	NA
WP_000122641.1|164994_165615_+	superoxide dismutase [Mn]	NA	Q56AR7	Bacillus_thuringiensis_phage	59.3	8.4e-64
WP_001166063.1|165874_166858_+	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA	NA
WP_001270260.1|167006_167681_+	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA	NA
WP_000580417.1|167786_169160_-	envelope stress sensor histidine kinase CpxA	NA	W8CYF6	Bacillus_phage	25.9	3.8e-16
WP_001033722.1|169156_169855_-	envelope stress response regulator transcription factor CpxR	NA	Q6XM27	Feldmannia_irregularis_virus	30.3	5.3e-06
>prophage 14
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	181429	185932	4639229		Paramecium_bursaria_Chlorella_virus(50.0%)	5	NA	NA
WP_000084268.1|181429_182275_-	glycerol uptake facilitator protein GlpF	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	28.0	4.4e-15
WP_001296623.1|182699_182945_+	septal ring assembly protein ZapB	NA	NA	NA	NA	NA
WP_000872908.1|183029_183515_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA	NA
WP_000139496.1|183607_184534_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_001293341.1|184600_185932_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.9	1.7e-45
>prophage 15
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	203230	210477	4639229		Synechococcus_phage(33.33%)	5	NA	NA
WP_000424840.1|203230_203893_-	fructose-6-phosphate aldolase	NA	A0A0E3F0E2	Synechococcus_phage	34.6	5.5e-29
WP_001174077.1|203904_206406_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	26.9	1.0e-11
WP_001004446.1|206714_207794_+	PTS fructose transporter subunit EIIC	NA	NA	NA	NA	NA
WP_000161265.1|207808_208129_+	PTS fructose-like transporter subunit IIB	NA	NA	NA	NA	NA
WP_000184811.1|208179_210477_+	formate C-acetyltransferase	NA	A0A1S6UAD4	Serratia_phage	48.1	4.6e-06
>prophage 16
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	227823	229668	4639229		Acinetobacter_phage(100.0%)	1	NA	NA
WP_000591375.1|227823_229668_+	TonB-dependent vitamin B12 receptor BtuB	NA	A0A0P0I887	Acinetobacter_phage	32.0	7.1e-10
>prophage 17
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	238260	241313	4639229		uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_000023081.1|238260_239211_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	32.0	8.7e-28
WP_000031784.1|240128_241313_+	elongation factor Tu	NA	A0A2K9L516	Tupanvirus	26.1	4.4e-13
>prophage 18
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	245429	253758	4639229		Chrysochromulina_ericina_virus(50.0%)	2	NA	NA
WP_000263098.1|245429_249458_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	29.0	9.4e-23
WP_000653944.1|249534_253758_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	26.5	2.5e-66
>prophage 19
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	262974	264738	4639229		Klosneuvirus(50.0%)	3	NA	NA
WP_000362388.1|262974_263646_+	deoxyribonuclease V	NA	A0A1V0SJW5	Klosneuvirus	28.7	6.1e-20
WP_000940106.1|263688_264279_+	YjaG family protein	NA	NA	NA	NA	NA
WP_001044513.1|264465_264738_+	DNA-binding protein HU-alpha	NA	A7KV42	Bacillus_phage	58.9	3.2e-20
>prophage 20
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	270127	271717	4639229		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_001187559.1|270127_271717_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.7	2.9e-68
>prophage 21
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	288012	291696	4639229		Dickeya_phage(100.0%)	1	NA	NA
WP_000096011.1|288012_291696_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	90.2	1.3e-26
>prophage 22
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	310968	312084	4639229		Mycoplasma_phage(100.0%)	1	NA	NA
WP_000179165.1|310968_312084_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	31.7	4.3e-18
>prophage 23
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	321299	321908	4639229		Lactococcus_phage(100.0%)	1	NA	NA
WP_000646078.1|321299_321908_+	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
>prophage 24
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	328498	331046	4639229		Escherichia_phage(50.0%)	2	NA	NA
WP_000918363.1|328498_329914_+	replicative DNA helicase	NA	O80281	Escherichia_phage	78.3	4.8e-200
WP_001147328.1|329966_331046_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	27.9	5.2e-29
>prophage 25
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	335233	338846	4639229		uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_000357740.1|335233_338056_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.1	0.0e+00
WP_000168305.1|338309_338846_+	single-stranded DNA-binding protein SSB1	NA	A0A0A0P1Q9	Enterobacteria_phage	78.7	1.1e-56
>prophage 26
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	342663	344013	4639229		Moraxella_phage(100.0%)	1	NA	NA
WP_000106882.1|342663_344013_+	guanine/hypoxanthine transporter GhxP	NA	A0A0R6PHV4	Moraxella_phage	71.6	1.8e-159
>prophage 27
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	349597	351556	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078239.1|349597_351556_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	40.4	1.9e-90
>prophage 28
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	361292	363440	4639229		Escherichia_phage(100.0%)	1	NA	NA
WP_001300547.1|361292_363440_-	formate dehydrogenase subunit alpha	NA	A0A077SK27	Escherichia_phage	23.9	7.0e-33
>prophage 29
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	368685	375054	4639229		Tetraselmis_virus(50.0%)	5	NA	NA
WP_001066019.1|368685_370671_-	alkyl sulfatase YjcS	NA	A0A2P0VMX1	Tetraselmis_virus	44.3	4.2e-149
WP_001171687.1|370943_371873_-	allose kinase	NA	NA	NA	NA	NA
WP_001311314.1|371856_372552_-	D-allulose-6-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_000507106.1|372562_373543_-	D-allose ABC transporter permease	NA	NA	NA	NA	NA
WP_000235257.1|373521_375054_-	D-allose ABC transporter ATP-binding protein AlsA	NA	A0A2H4PQG7	Staphylococcus_phage	31.6	4.8e-20
>prophage 30
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	381288	382838	4639229		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000611405.1|381288_381969_-	phosphonate C-P lyase system protein PhnL	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.5	7.1e-08
WP_001075514.1|382079_382838_-	phosphonate C-P lyase system protein PhnK	NA	G3M9Y6	Bacillus_virus	28.2	3.6e-16
>prophage 31
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	388450	389239	4639229		Cedratvirus(100.0%)	1	NA	NA
WP_001193409.1|388450_389239_-	phosphonate ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	30.1	6.5e-13
>prophage 32
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	394575	396078	4639229		Burkholderia_virus(100.0%)	1	NA	NA
WP_001298520.1|394575_396078_+	glycine betaine/L-proline transporter ProP	NA	Q6JIH2	Burkholderia_virus	31.2	2.4e-56
>prophage 33
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	417273	420485	4639229	tRNA	Catovirus(50.0%)	2	NA	NA
WP_001295074.1|417273_418791_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	38.0	2.7e-87
WP_000856829.1|419027_420485_-	dipeptide/tripeptide permease DtpC	NA	A0A0P0IY73	Acinetobacter_phage	29.4	6.8e-48
>prophage 34
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	434761	436745	4639229		Cronobacter_phage(50.0%)	2	NA	NA
WP_001026276.1|434761_435055_+	co-chaperone GroES	NA	K4F9I2	Cronobacter_phage	45.4	9.2e-13
WP_000729117.1|435098_436745_+	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	68.9	5.3e-190
>prophage 35
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	441262	441796	4639229		Morganella_phage(100.0%)	1	NA	NA
WP_001238378.1|441262_441796_-	lipocalin Blc	NA	A0A1W6JNX6	Morganella_phage	55.0	2.7e-47
>prophage 36
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	446716	447694	4639229		Tupanvirus(100.0%)	1	NA	NA
WP_000004771.1|446716_447694_+	elongation factor P--(R)-beta-lysine ligase	NA	A0A2K9KZX5	Tupanvirus	28.2	6.8e-28
>prophage 37
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	455677	456223	4639229		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001295188.1|455677_456223_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	40.4	2.2e-28
>prophage 38
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	460138	473169	4639229	tRNA,protease	Vibrio_phage(20.0%)	11	NA	NA
WP_000990333.1|460138_461476_+	N-acetylmuramoyl-L-alanine amidase AmiB	NA	A0A067ZJB6	Vibrio_phage	31.0	8.8e-18
WP_001122505.1|461485_463333_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	41.3	4.4e-60
WP_001280345.1|463325_464276_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_001051883.1|464361_464670_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_000460362.1|464745_466026_+	GTPase HflX	NA	NA	NA	NA	NA
WP_000312488.1|466111_467371_+|protease	FtsH protease activity modulator HflK	protease	A0A1L2CVV0	Pectobacterium_phage	25.5	3.6e-05
WP_001232412.1|467373_468378_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_001089295.1|468459_468657_+	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_000527955.1|468760_470059_+	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	35.9	2.2e-66
WP_001177639.1|470263_470689_+	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA	NA
WP_000076332.1|470727_473169_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.1	3.8e-67
>prophage 39
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	477101	478265	4639229		Ralstonia_phage(100.0%)	1	NA	NA
WP_000943959.1|477101_478265_+	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	43.5	6.4e-81
>prophage 40
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	513195	519683	4639229		uncultured_Caudovirales_phage(33.33%)	6	NA	NA
WP_000055075.1|513195_513726_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	63.3	1.2e-55
WP_000265913.1|514035_514992_+	galactofuranose ABC transporter substrate-binding protein YtfQ	NA	NA	NA	NA	NA
WP_000205805.1|515131_516634_+	sugar ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.3	1.8e-11
WP_001313531.1|516647_517670_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000596014.1|517656_518652_+	sugar ABC transporter permease YjfF	NA	NA	NA	NA	NA
WP_000853753.1|518684_519683_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	42.7	5.7e-70
>prophage 41
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	523973	526734	4639229		Cronobacter_phage(50.0%)	2	NA	NA
WP_001106233.1|523973_524438_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	NA	K4F9T1	Cronobacter_phage	57.7	3.8e-53
WP_000187778.1|524595_526734_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	64.5	1.5e-266
>prophage 42
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	531698	536469	4639229		Paramecium_bursaria_Chlorella_virus(100.0%)	4	NA	NA
WP_000471889.1|531698_534395_+	magnesium-translocating P-type ATPase	NA	M1HLC0	Paramecium_bursaria_Chlorella_virus	27.4	9.0e-46
WP_000047539.1|534600_534987_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
WP_000148581.1|535059_535521_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_000013046.1|535533_536469_-	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	40.2	2.9e-52
>prophage 43
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	545055	554137	4639229	tRNA	Klosneuvirus(33.33%)	6	NA	NA
WP_000416392.1|545055_547911_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	36.7	1.8e-140
WP_000786400.1|547910_548354_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_000397144.1|548513_550025_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	38.0	6.0e-47
WP_000584114.1|550291_551392_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_001295681.1|551391_552474_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_001294573.1|552634_554137_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.2	4.6e-84
>prophage 44
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	559263	563573	4639229	transposase	Acanthamoeba_polyphaga_mimivirus(50.0%)	2	NA	NA
WP_001309160.1|559263_560283_-	NADPH-dependent aldehyde reductase Ahr	NA	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	30.7	1.1e-44
WP_085947917.1|562300_563573_+|transposase	IS3-like element IS2 family transposase	transposase	Q9ZXG3	Shigella_phage	99.3	1.4e-177
>prophage 45
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	571539	576488	4639229	transposase	Staphylococcus_phage(33.33%)	4	NA	NA
WP_001254932.1|571539_572691_-|transposase	IS30-like element IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	2.0e-42
WP_000177057.1|573949_574207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000175457.1|574763_575531_-	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	NA	G3M9Y6	Bacillus_virus	24.8	6.4e-13
WP_000684852.1|575531_576488_-	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.1	8.2e-18
>prophage 46
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	600687	601668	4639229		Stx2-converting_phage(100.0%)	1	NA	NA
WP_000991438.1|600687_601668_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	Q08JA2	Stx2-converting_phage	56.6	4.7e-101
>prophage 47
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	605030	606707	4639229		Escherichia_phage(100.0%)	2	NA	NA
WP_000790583.1|605030_605633_+	type 1 fimbria regulatory protein FimB	NA	A0A2L1IV36	Escherichia_phage	52.3	3.1e-55
WP_000044711.1|606110_606707_+	type 1 fimbria regulatory protein FimE	NA	A0A2L1IV36	Escherichia_phage	53.4	3.9e-50
>prophage 48
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	616974	618435	4639229		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_000208205.1|616974_618435_+	fructuronate reductase	NA	H8ZJP8	Ostreococcus_tauri_virus	31.9	4.7e-49
>prophage 49
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	625003	625558	4639229		Clostridioides_phage(100.0%)	1	NA	NA
WP_001151855.1|625003_625558_+	RNA 2'-phosphotransferase	NA	A0A2R2ZGT8	Clostridioides_phage	45.6	2.7e-37
>prophage 50
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	655730	661086	4639229		uncultured_Caudovirales_phage(50.0%)	4	NA	NA
WP_000919536.1|655730_657386_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	39.6	6.2e-13
WP_000410113.1|657434_658796_-	MFS transporter	NA	NA	NA	NA	NA
WP_000091570.1|659010_659925_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000106030.1|660063_661086_+	L-galactonate oxidoreductase	NA	A0A2K9L7I1	Tupanvirus	26.3	2.7e-11
>prophage 51
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	664311	665591	4639229		Shigella_phage(50.0%)	2	NA	NA
WP_000799911.1|664311_665049_-	DNA replication protein DnaC	NA	V5UQI5	Shigella_phage	50.8	7.6e-64
WP_000098818.1|665051_665591_-	primosomal protein DnaT	NA	T1SA92	Salmonella_phage	62.8	2.9e-28
>prophage 52
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	673487	676363	4639229		Streptococcus_phage(50.0%)	3	NA	NA
WP_000175940.1|673487_675077_+	peptide chain release factor 3	NA	D0R0F5	Streptococcus_phage	25.2	2.4e-30
WP_001295748.1|675469_676075_+	molecular chaperone OsmY	NA	NA	NA	NA	NA
WP_000490275.1|676201_676363_+	DUF1328 domain-containing protein	NA	A0A0N7CBR2	Salmonella_phage	64.2	1.8e-10
>prophage 53
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	682302	683625	4639229		Geobacillus_virus(100.0%)	1	NA	NA
WP_000477807.1|682302_683625_+	thymidine phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	39.8	1.4e-79
>prophage 54
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	691388	696744	4639229		Enterococcus_phage(33.33%)	3	NA	NA
WP_000093814.1|691388_692621_+	multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	NA	A0A0C5K935	Enterococcus_phage	42.6	3.6e-82
WP_000046749.1|692928_694596_-	energy-dependent translational throttle protein EttA	NA	A0A1V0SKJ1	Klosneuvirus	26.4	3.7e-42
WP_000409451.1|694806_696744_+	murein transglycosylase	NA	A0A1P8CWQ1	Bacillus_phage	34.8	4.0e-11
>prophage 55
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	700080	702194	4639229		Bacillus_phage(50.0%)	2	NA	NA
WP_001188654.1|700080_700770_+	two-component system response regulator CreB	NA	W8CYM9	Bacillus_phage	34.8	3.3e-29
WP_001219577.1|700769_702194_+	two-component system sensor histidine kinase CreC	NA	Q8QKV7	Ectocarpus_siliculosus_virus	20.9	1.2e-09
>prophage 56
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	713963	724381	4639229	transposase	Cyanophage(20.0%)	10	NA	NA
WP_000130185.1|713963_714917_+	transaldolase	NA	A0A127KNC6	Cyanophage	31.5	1.7e-10
WP_001295414.1|715031_715619_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_000528538.1|715653_716220_-	acetate uptake transporter	NA	NA	NA	NA	NA
WP_001102367.1|716368_717082_-	acidic protein MsyB	NA	NA	NA	NA	NA
WP_000843565.1|717107_717512_-	DUF2541 family protein	NA	NA	NA	NA	NA
WP_000516135.1|717888_719805_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	51.1	6.9e-149
WP_001118476.1|719893_721024_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	37.1	1.4e-27
WP_001300563.1|721170_722283_+|transposase	IS4-like element IS421 family transposase	transposase	NA	NA	NA	NA
WP_000935262.1|722476_722686_-	type I toxin-antitoxin system toxin MokC	NA	A0A0P0ZAX5	Stx2-converting_phage	73.9	8.0e-19
WP_000681354.1|723214_724381_+	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	50.5	3.4e-90
>prophage 57
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	728116	730933	4639229	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_001286857.1|728116_730933_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2K9L260	Tupanvirus	26.1	2.7e-77
>prophage 58
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	735376	736525	4639229		Halovirus(100.0%)	1	NA	NA
WP_000597260.1|735376_736525_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	32.6	1.7e-49
>prophage 59
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	741996	747657	4639229		Hepacivirus(50.0%)	4	NA	NA
WP_001350478.1|741996_743550_-	crotonobetaine/carnitine-CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	2.1e-31
WP_000349936.1|743623_744841_-	L-carnitine CoA-transferase	NA	NA	NA	NA	NA
WP_000347117.1|744969_746112_-	crotonobetainyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_000787103.1|746142_747657_-	L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA	A0A2I7QNT1	Vibrio_phage	21.1	3.5e-07
>prophage 60
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	755548	756948	4639229		Bacillus_phage(50.0%)	2	NA	NA
WP_000624375.1|755548_756028_+	type 3 dihydrofolate reductase	NA	A0A219UQN5	Bacillus_phage	46.4	1.0e-29
WP_000257192.1|756105_756948_-	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA	A0A075BTY6	Microcystis_phage	42.0	1.0e-08
>prophage 61
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	766083	775140	4639229		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_001117011.1|766083_768990_-	RNA polymerase-associated protein RapA	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	37.9	5.7e-22
WP_000035670.1|769154_771506_-	DNA polymerase II	NA	A0A0P0YM26	Yellowstone_lake_phycodnavirus	25.5	1.3e-37
WP_051983899.1|771580_772300_-	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA	NA
WP_001300811.1|772599_773478_+	arabinose operon transcriptional regulator AraC	NA	NA	NA	NA	NA
WP_001148390.1|773563_774328_+	DedA family protein	NA	NA	NA	NA	NA
WP_000916281.1|774441_775140_-	thiamine ABC transporter ATP-binding protein ThiQ	NA	G9BWD6	Planktothrix_phage	37.2	3.6e-23
>prophage 62
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	787842	789567	4639229		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_001295534.1|787842_789567_+	acetolactate synthase 3 large subunit	NA	E5ERI2	Ostreococcus_lucimarinus_virus	26.9	1.4e-36
>prophage 63
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	815656	816700	4639229		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_001217338.1|815656_816700_+	GMP reductase	NA	A0A0N9Q9A5	Chrysochromulina_ericina_virus	56.3	6.3e-104
>prophage 64
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	820945	821497	4639229		Sphingobium_phage(100.0%)	1	NA	NA
WP_000923721.1|820945_821497_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	32.3	3.0e-12
>prophage 65
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	830124	831549	4639229		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000102485.1|830124_831549_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.8	4.2e-42
>prophage 66
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	839295	845918	4639229		Mamastrovirus(33.33%)	5	NA	NA
WP_001189647.1|839295_840846_+	multicopper oxidase CueO	NA	A0A0C6DWA2	Mamastrovirus	55.4	2.7e-18
WP_001306211.1|841047_843438_-	quinoprotein glucose dehydrogenase	NA	NA	NA	NA	NA
WP_000683335.1|843643_844180_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	33.1	5.1e-17
WP_000651599.1|844220_844883_-	carbonate dehydratase	NA	NA	NA	NA	NA
WP_000150637.1|844991_845918_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	34.0	1.2e-21
>prophage 67
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	849180	850083	4639229		Sodalis_phage(100.0%)	1	NA	NA
WP_000339954.1|849180_850083_+	recombination-promoting nuclease RpnC	NA	Q2A0A7	Sodalis_phage	49.2	7.4e-61
>prophage 68
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	859941	866747	4639229	tRNA	unidentified_phage(50.0%)	6	NA	NA
WP_000174643.1|859941_861360_-	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	37.9	3.2e-26
WP_000937424.1|861398_862325_-|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
WP_001155227.1|862361_862817_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_000396036.1|862994_863699_-	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_001294700.1|863713_864244_-	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA	NA
WP_001350480.1|864317_866747_+	ATP-dependent helicase HrpB	NA	A0A0G2Y9F4	Acanthamoeba_polyphaga_mimivirus	30.1	1.3e-38
>prophage 69
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	871990	872788	4639229		Planktothrix_phage(100.0%)	1	NA	NA
WP_001158931.1|871990_872788_+	Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC	NA	G9BWD6	Planktothrix_phage	26.9	2.7e-14
>prophage 70
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	878822	879167	4639229		Lake_Baikal_phage(100.0%)	1	NA	NA
WP_001295564.1|878822_879167_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	51.4	4.5e-27
>prophage 71
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	883096	884521	4639229	protease	uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000753946.1|883096_884521_+|protease	serine endoprotease DegP	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.8	1.9e-26
>prophage 72
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	897118	897877	4639229		Flavobacterium_phage(100.0%)	1	NA	NA
WP_001295562.1|897118_897877_+	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	NA	R9W0U9	Flavobacterium_phage	44.4	7.7e-27
>prophage 73
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	906705	910821	4639229		Emiliania_huxleyi_virus(50.0%)	2	NA	NA
WP_000569430.1|906705_907302_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.0	1.0e-26
WP_001294757.1|907338_910821_+	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.9	2.2e-209
>prophage 74
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	923826	924858	4639229		Planktothrix_phage(100.0%)	1	NA	NA
WP_000594006.1|923826_924858_-	methionine ABC transporter ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	39.7	9.4e-36
>prophage 75
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	931379	939011	4639229		Indivirus(25.0%)	9	NA	NA
WP_000997010.1|931379_932183_+	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	36.2	2.4e-39
WP_000648572.1|932179_933094_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001230983.1|933334_934135_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_000016007.1|934138_934762_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_000644685.1|934809_936168_-	murein transglycosylase D	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	36.0	5.8e-09
WP_001052715.1|936239_936995_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_001326702.1|937028_937751_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000917883.1|937747_938215_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.7	1.0e-50
WP_001340895.1|938279_939011_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.0	4.5e-40
>prophage 76
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	945755	1002371	4639229	transposase,integrase	Streptococcus_phage(15.38%)	58	964335:964394	998643:998702
WP_000284050.1|945755_946334_+	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	32.0	1.1e-14
WP_000333380.1|946539_947307_+	class II glutamine amidotransferase	NA	NA	NA	NA	NA
WP_001225679.1|947277_948018_-	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000615983.1|948173_948452_-	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA	NA
WP_000729703.1|948454_948715_-	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA	NA
WP_000056849.1|948924_949674_+	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	38.5	9.0e-20
WP_000006255.1|949849_950347_+|transposase	REP-associated tyrosine transposase RayT	transposase	NA	NA	NA	NA
WP_001334802.1|950570_952310_-	flagellar type III secretion system protein FlhA	NA	NA	NA	NA	NA
WP_001333407.1|952269_953040_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA	NA
WP_001226164.1|953110_954166_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000554758.1|954217_954511_+	type I toxin-antitoxin system antitoxin YafN	NA	NA	NA	NA	NA
WP_001263489.1|954513_954912_+	type II toxin-antitoxin system mRNA interferase toxin YafO	NA	NA	NA	NA	NA
WP_001059892.1|954921_955374_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001295202.1|955679_955946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001326471.1|955878_956415_+	peptide chain release factor H	NA	NA	NA	NA	NA
WP_001292994.1|956471_957929_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA	NA
WP_001291990.1|958189_958648_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000189532.1|958739_959984_+	esterase FrsA	NA	NA	NA	NA	NA
WP_000174689.1|960041_960443_+	sigma factor-binding protein Crl	NA	NA	NA	NA	NA
WP_000749863.1|960481_961537_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	61.1	9.1e-119
WP_001285288.1|961824_962928_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.1e-61
WP_000893278.1|962939_964193_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.2	9.8e-96
964335:964394	attL	CGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAA	NA	NA	NA	NA
WP_000854672.1|964764_965106_-	type IV toxin-antitoxin system toxin YkfI	NA	NA	NA	NA	NA
WP_000070395.1|965126_965444_-	type IV toxin-antitoxin system antitoxin YafW	NA	NA	NA	NA	NA
WP_000691994.1|965462_965684_-	DUF987 domain-containing protein	NA	NA	NA	NA	NA
WP_000811693.1|965692_966169_-	RadC family protein	NA	NA	NA	NA	NA
WP_000211838.1|966184_966643_-	antirestriction protein	NA	A9J566	Pseudomonas_phage	32.8	2.0e-14
WP_000194654.1|966740_966980_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
WP_001547765.1|967056_967524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000824223.1|967546_967990_-	lipoprotein, inner membrane; degP regulator; CP4-6 prophage	NA	NA	NA	NA	NA
WP_001548158.1|967989_968217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000197389.1|968620_969442_-	DUF945 domain-containing protein	NA	A0A2C9CX26	Yersinia_phage	39.4	7.2e-47
WP_001065553.1|969533_970397_-	GTPase family protein	NA	NA	NA	NA	NA
WP_000770246.1|970725_971619_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001254938.1|972039_973191_+|transposase	IS30-like element IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.9	8.9e-43
WP_010723085.1|975537_976554_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
WP_001393629.1|976761_978165_+	S-methylmethionine permease	NA	NA	NA	NA	NA
WP_000081352.1|978151_979084_+	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_000192349.1|979192_980239_-	ferric ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.7	1.5e-33
WP_000015532.1|981460_981799_-|transposase	transposase	transposase	U5P4I9	Shigella_phage	91.2	2.7e-32
WP_001030800.1|981821_982172_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA	NA
WP_010723086.1|982265_983420_-|transposase	IS481-like element ISEc19 family transposase	transposase	NA	NA	NA	NA
WP_001136613.1|983714_984623_+	2-keto-3-deoxygluconate aldolase	NA	NA	NA	NA	NA
WP_000151261.1|984637_986605_+	xylonate dehydratase YagF	NA	NA	NA	NA	NA
WP_000192863.1|986831_988214_+	MFS transporter	NA	NA	NA	NA	NA
WP_000406871.1|988225_989836_+	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
WP_001121657.1|989840_990599_-	DNA-binding transcriptional repressor XynR	NA	NA	NA	NA	NA
WP_001281825.1|990737_991742_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000388269.1|992936_993668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000860996.1|993758_994385_-	inovirus Gp2 family protein	NA	NA	NA	NA	NA
WP_151576321.1|994656_995355_-	recombinase family protein	NA	NA	NA	NA	NA
WP_000072039.1|995381_996236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001272156.1|996354_996579_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000224818.1|996575_997016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001407714.1|997132_998533_-|integrase	integrase family protein	integrase	A0A221SAN4	Ralstonia_phage	28.4	9.5e-07
WP_001111342.1|998817_999228_-	hypothetical protein	NA	NA	NA	NA	NA
998643:998702	attR	CGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAA	NA	NA	NA	NA
WP_000121359.1|999206_1000163_-	molybdenum cofactor insertion chaperone PaoD	NA	NA	NA	NA	NA
WP_000667026.1|1000172_1002371_-	aldehyde oxidoreductase molybdenum-binding subunit PaoC	NA	A0A0P0I429	Acinetobacter_phage	25.8	2.5e-38
>prophage 77
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1016727	1021438	4639229	transposase	Acinetobacter_phage(50.0%)	4	NA	NA
WP_085947771.1|1016727_1017889_+|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
WP_001299021.1|1019162_1019756_-	reactive chlorine species resistance protein RclC	NA	NA	NA	NA	NA
WP_000474084.1|1019767_1020004_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_001046307.1|1020112_1021438_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.6	2.5e-113
>prophage 78
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1027013	1032933	4639229	holin	Catovirus(50.0%)	4	NA	NA
WP_001159094.1|1027013_1028684_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	31.2	4.7e-61
WP_000089110.1|1028697_1030170_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001335745.1|1030183_1030771_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_000131044.1|1030899_1032933_+|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	27.4	3.4e-21
>prophage 79
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1044320	1045370	4639229		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_000692754.1|1044320_1045370_+	NADPH-dependent aldehyde reductase YahK	NA	A0A0G2YAX3	Acanthamoeba_polyphaga_mimivirus	42.6	2.8e-72
>prophage 80
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1054142	1056029	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000010288.1|1054142_1056029_+	propionate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	29.4	7.0e-53
>prophage 81
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1059227	1060127	4639229		Lactobacillus_phage(100.0%)	1	NA	NA
WP_000952503.1|1059227_1060127_-	transcriptional regulator CynR	NA	A0A2P0ZL89	Lactobacillus_phage	27.3	4.2e-16
>prophage 82
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1066386	1067469	4639229		Enterobacteria_phage(100.0%)	1	NA	NA
WP_071843335.1|1066386_1067469_-	DNA-binding transcriptional repressor LacI	NA	C6ZCU4	Enterobacteria_phage	99.7	2.2e-192
>prophage 83
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1071780	1076063	4639229	transposase	Staphylococcus_phage(33.33%)	4	NA	NA
WP_001254932.1|1071780_1072932_+|transposase	IS30-like element IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	2.0e-42
WP_000160710.1|1073296_1074106_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
WP_000044314.1|1074102_1075053_+	acetaldehyde dehydrogenase	NA	G9E526	Ostreococcus_lucimarinus_virus	35.2	8.7e-36
WP_001013499.1|1075049_1076063_+	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	31.1	1.2e-43
>prophage 84
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1079643	1083760	4639229	transposase	Prochlorococcus_phage(50.0%)	5	NA	NA
WP_000842106.1|1079643_1080753_-	S-(hydroxymethyl)glutathione dehydrogenase	NA	A0A0K0KVL7	Prochlorococcus_phage	28.6	8.9e-32
WP_001141271.1|1080787_1081063_-	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA	NA
WP_000596084.1|1081250_1082024_-	YaiO family outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_000012218.1|1082025_1082469_-	transferase	NA	NA	NA	NA	NA
WP_085947917.1|1082487_1083760_+|transposase	IS3-like element IS2 family transposase	transposase	Q9ZXG3	Shigella_phage	99.3	1.4e-177
>prophage 85
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1087388	1088156	4639229		Planktothrix_phage(100.0%)	1	NA	NA
WP_000939375.1|1087388_1088156_+	taurine ABC transporter ATP-binding subunit	NA	G9BWD6	Planktothrix_phage	40.3	8.6e-26
>prophage 86
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1092920	1097469	4639229	transposase	Acinetobacter_phage(50.0%)	3	NA	NA
WP_085947771.1|1092920_1094083_-|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
WP_001295335.1|1095687_1096311_+	hydrogen peroxide resistance inhibitor IprA	NA	NA	NA	NA	NA
WP_000830741.1|1096311_1097469_-	OXA-12 family class D beta-lactamase AmpH	NA	A0A2H4JAN9	uncultured_Caudovirales_phage	22.1	5.1e-06
>prophage 87
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1104884	1106000	4639229		Bacillus_phage(100.0%)	1	NA	NA
WP_000484048.1|1104884_1106000_+	diguanylate cyclase AdrA	NA	A0A127AWB9	Bacillus_phage	34.5	1.1e-18
>prophage 88
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1110289	1120366	4639229		Bacillus_phage(60.0%)	7	NA	NA
WP_001298537.1|1110289_1111201_-	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	63.6	2.7e-103
WP_001219309.1|1111325_1112234_+	fructokinase	NA	NA	NA	NA	NA
WP_001326926.1|1112478_1113663_-	MFS transporter AraJ	NA	NA	NA	NA	NA
WP_000698951.1|1113788_1116935_-	exonuclease subunit SbcC	NA	G3MAB6	Bacillus_virus	26.9	5.8e-12
WP_001221319.1|1116931_1118134_-	exonuclease subunit SbcD	NA	R4JGS2	Bacillus_phage	32.4	2.4e-06
WP_000113933.1|1118323_1119013_+	phosphate response regulator transcription factor PhoB	NA	W8CYM9	Bacillus_phage	38.0	4.4e-37
WP_000893623.1|1119070_1120366_+	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	30.8	1.7e-26
>prophage 89
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1127318	1136299	4639229	tRNA	uncultured_Mediterranean_phage(60.0%)	10	NA	NA
WP_000667319.1|1127318_1128446_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	46.1	2.1e-89
WP_000007629.1|1128468_1128801_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	33.0	2.8e-10
WP_000934822.1|1128828_1130676_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_000046637.1|1130686_1131658_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	37.9	1.0e-44
WP_000974813.1|1131786_1132134_+	HNH nuclease family protein	NA	NA	NA	NA	NA
WP_001295328.1|1132310_1133195_-	nucleoside-specific channel-forming protein Tsx	NA	NA	NA	NA	NA
WP_001326929.1|1133493_1134033_-	DUF3251 domain-containing protein	NA	NA	NA	NA	NA
WP_000543535.1|1134183_1134633_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_001150457.1|1134636_1135740_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.8	2.8e-54
WP_001021161.1|1135828_1136299_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	47.4	1.3e-29
>prophage 90
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1157858	1162905	4639229	protease	Agrobacterium_phage(25.0%)	4	NA	NA
WP_000122253.1|1157858_1158482_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	63.9	2.9e-64
WP_000130305.1|1158607_1159882_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.4	8.7e-132
WP_001295325.1|1160069_1162424_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.4	1.6e-224
WP_001043542.1|1162632_1162905_+	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.1e-20
>prophage 91
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1166033	1166729	4639229		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000817220.1|1166033_1166729_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	67.6	5.5e-88
>prophage 92
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1170052	1173599	4639229		Bacillus_phage(100.0%)	2	NA	NA
WP_001235649.1|1170052_1171825_+	SmdA family multidrug ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.1	3.4e-49
WP_001256201.1|1171817_1173599_+	SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.1	2.3e-42
>prophage 93
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1182435	1185585	4639229		Leptospira_phage(100.0%)	1	NA	NA
WP_001132469.1|1182435_1185585_-	multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.9	6.2e-54
>prophage 94
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1192593	1201155	4639229		Klosneuvirus(25.0%)	8	NA	NA
WP_000127356.1|1192593_1193145_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	47.3	3.7e-31
WP_000122013.1|1193273_1195205_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	41.5	5.1e-43
WP_000467098.1|1195257_1195587_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_001195025.1|1195586_1196192_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_000678201.1|1196301_1198176_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	38.0	1.0e-117
WP_001220233.1|1198356_1199001_+	adenylate kinase	NA	NA	NA	NA	NA
WP_001250103.1|1199236_1200199_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000801813.1|1200195_1201155_-	acetyl esterase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	24.3	3.8e-15
>prophage 95
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1209399	1212561	4639229		Escherichia_phage(50.0%)	2	NA	NA
WP_000806442.1|1209399_1209741_+	HigA family addiction module antidote protein	NA	A0A222YWD7	Escherichia_phage	75.5	3.2e-41
WP_000083955.1|1210056_1212561_-	copper-exporting P-type ATPase CopA	NA	A0A218MNH6	uncultured_virus	38.4	2.9e-115
>prophage 96
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1217100	1283279	4639229	lysis,integrase,tRNA,terminase,transposase,protease	Enterobacteria_phage(48.28%)	69	1265937:1265983	1290730:1290776
WP_001157540.1|1217100_1217778_+	iron ABC transporter ATP-binding protein FetA	NA	G3M9Y6	Bacillus_virus	34.3	1.4e-27
WP_001295323.1|1217764_1218544_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_001300573.1|1218606_1219461_-	chaperedoxin	NA	NA	NA	NA	NA
WP_000148959.1|1219521_1220331_-	NADP(+)-dependent aldehyde reductase	NA	NA	NA	NA	NA
WP_001295836.1|1220320_1220944_-|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	protease	NA	NA	NA	NA
WP_001110573.1|1220914_1221601_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.6	2.9e-33
WP_000561872.1|1221597_1224012_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000014739.1|1224442_1228723_+	rhs element protein RhsD	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	32.1	1.7e-22
WP_000877768.1|1228762_1229131_+	immunity protein	NA	NA	NA	NA	NA
WP_001320180.1|1229821_1230082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001157938.1|1231313_1232408_-|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
WP_000460145.1|1232476_1233403_-	HTH-type transcriptional activator AllS	NA	NA	NA	NA	NA
WP_000776377.1|1233632_1234115_+	ureidoglycolate lyase	NA	NA	NA	NA	NA
WP_000141275.1|1234192_1235008_+	HTH-type transcriptional repressor AllR	NA	NA	NA	NA	NA
WP_001096881.1|1235097_1236879_+	glyoxylate carboligase	NA	E4WLQ6	Ostreococcus_tauri_virus	27.0	3.5e-38
WP_000943544.1|1236891_1237668_+	hydroxypyruvate isomerase	NA	NA	NA	NA	NA
WP_000765839.1|1237767_1238646_+	2-hydroxy-3-oxopropionate reductase	NA	NA	NA	NA	NA
WP_000401100.1|1238814_1240269_+	putative allantoin permease	NA	NA	NA	NA	NA
WP_000006900.1|1240328_1241690_+	allantoinase AllB	NA	NA	NA	NA	NA
WP_001302767.1|1241746_1243048_+	uracil/xanthine transporter	NA	NA	NA	NA	NA
WP_001333621.1|1243069_1244215_+	glycerate 3-kinase	NA	W6LM47	Streptococcus_phage	41.6	9.1e-48
WP_000540997.1|1244442_1245228_-	(S)-ureidoglycine aminohydrolase	NA	NA	NA	NA	NA
WP_001310618.1|1245238_1246474_-	allantoate deiminase	NA	NA	NA	NA	NA
WP_000703900.1|1246495_1247545_-	ureidoglycolate dehydrogenase	NA	NA	NA	NA	NA
WP_000580829.1|1247861_1249529_+	acyl-CoA synthetase FdrA	NA	NA	NA	NA	NA
WP_000495367.1|1249538_1250798_+	DUF1116 domain-containing protein	NA	NA	NA	NA	NA
WP_000152519.1|1250808_1251624_+	DUF2877 domain-containing protein	NA	NA	NA	NA	NA
WP_000855379.1|1251620_1252514_+	carbamate kinase	NA	NA	NA	NA	NA
WP_000815571.1|1252708_1253776_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_001295318.1|1253772_1254282_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA	NA
WP_000212247.1|1254399_1255122_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_000255997.1|1255124_1255619_-	peptidylprolyl isomerase B	NA	NA	NA	NA	NA
WP_000912385.1|1255792_1257178_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.5	6.7e-45
WP_001143542.1|1257213_1257735_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_000190288.1|1257842_1258055_-	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_000729160.1|1258056_1258923_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	37.5	1.7e-30
WP_000776555.1|1259393_1259936_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA	NA
WP_000988364.1|1260155_1260848_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA	NA
WP_001333622.1|1260878_1263482_+	fimbrial biogenesis usher protein	NA	NA	NA	NA	NA
WP_001350487.1|1263460_1264501_+	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA	NA
WP_001255230.1|1264511_1265027_+	fimbria assembly protein	NA	NA	NA	NA	NA
WP_000805428.1|1265029_1265662_-	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA	NA
1265937:1265983	attL	CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATT	NA	NA	NA	NA
WP_001350488.1|1265996_1267160_-|integrase	site-specific integrase	integrase	A0A088CD23	Shigella_phage	86.6	8.9e-200
WP_000672150.1|1267279_1267543_-	exonuclease	NA	B6DZ61	Enterobacteria_phage	97.7	1.8e-44
WP_000145909.1|1267865_1267961_+	hypothetical protein	NA	M1FPD5	Enterobacteria_phage	100.0	1.5e-09
WP_085947771.1|1268023_1269185_+|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
WP_001070439.1|1269496_1269829_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA	NA
WP_001372443.1|1269876_1270026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000709082.1|1270083_1271610_+	recombinase family protein	NA	Q3HQV4	Burkholderia_phage	27.8	7.9e-31
WP_001306955.1|1272074_1272626_+	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA	NA
WP_000881075.1|1272635_1273433_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001303586.1|1273549_1273651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001054340.1|1273647_1274103_+	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	66.9	4.1e-60
WP_000224915.1|1274102_1274273_+	protein NinE from lambdoid prophage DLP12	NA	K7P7K0	Enterobacteria_phage	69.8	2.4e-13
WP_000774486.1|1274265_1274556_+	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	93.8	3.3e-47
WP_001099712.1|1274552_1274915_+	crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	96.5	4.3e-60
WP_000971055.1|1274911_1275052_+	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	69.8	1.1e-08
WP_001204791.1|1275137_1275521_+	antitermination protein QuuD	NA	A0A088CD47	Shigella_phage	83.3	4.4e-55
WP_010723085.1|1275918_1276935_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
WP_000737282.1|1276939_1278007_-	porin	NA	Q1MVN1	Enterobacteria_phage	77.9	2.0e-150
WP_000839596.1|1278579_1278795_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_001135281.1|1278794_1279292_+	lysozyme RrrD	NA	M1FJA0	Enterobacteria_phage	98.2	1.1e-90
WP_001228697.1|1279508_1279691_+|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	78.3	1.4e-16
WP_000738500.1|1279781_1280075_-	serum resistance lipoprotein Bor	NA	A0A2R2X2B2	Escherichia_phage	97.9	5.7e-47
WP_000079503.1|1280365_1280776_-	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	98.5	1.2e-71
WP_001031427.1|1281061_1281268_+	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	100.0	5.8e-30
WP_001421937.1|1281432_1281627_-	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	100.0	8.7e-28
WP_000453566.1|1282015_1282561_+	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	4.0e-94
WP_001027248.1|1282535_1283279_+|terminase	phage terminase large subunit family protein	terminase	K7PMH7	Enterobacteria_phage	93.1	4.1e-73
1290730:1290776	attR	CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATT	NA	NA	NA	NA
>prophage 97
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1298000	1300116	4639229		Hokovirus(50.0%)	2	NA	NA
WP_000253839.1|1298000_1299443_-	Cu(+)/Ag(+) sensor histidine kinase CusS	NA	A0A1V0SGX0	Hokovirus	26.2	3.0e-11
WP_000770953.1|1299432_1300116_-	copper response regulator transcription factor CusR	NA	W8CYM9	Bacillus_phage	35.1	1.0e-30
>prophage 98
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1303386	1306530	4639229		Leptospira_phage(100.0%)	1	NA	NA
WP_000573945.1|1303386_1306530_+	Cu(+)/Ag(+) efflux RND transporter permease subunit CusA	NA	S5VTK5	Leptospira_phage	22.1	2.2e-59
>prophage 99
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1318829	1324872	4639229		Tupanvirus(50.0%)	3	NA	NA
WP_000077805.1|1318829_1322711_+	enterobactin non-ribosomal peptide synthetase EntF	NA	A0A2K9KZV5	Tupanvirus	29.0	1.6e-59
WP_000096692.1|1322926_1324060_+	LPS O-antigen length regulator	NA	NA	NA	NA	NA
WP_000140647.1|1324056_1324872_-	iron-enterobactin ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	22.0	7.3e-07
>prophage 100
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1339419	1341242	4639229		uncultured_marine_virus(50.0%)	2	NA	NA
WP_000502945.1|1339419_1340049_-	ParB-like nuclease domain-containing protein	NA	A0A0F7L444	uncultured_marine_virus	52.8	2.9e-56
WP_000029814.1|1340021_1341242_-	phosphoadenosine phosphosulfate reductase	NA	A0A220GKF8	Streptococcus_phage	32.8	3.6e-58
>prophage 101
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1344425	1346540	4639229		Bacillus_virus(50.0%)	2	NA	NA
WP_000887629.1|1344425_1345991_+	alkyl hydroperoxide reductase subunit F	NA	G3MA85	Bacillus_virus	34.3	2.2e-44
WP_000278509.1|1346111_1346540_-	universal stress protein UspG	NA	A0A1W6JNV4	Morganella_phage	39.2	1.1e-19
>prophage 102
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1361964	1362611	4639229		Morganella_phage(50.0%)	2	NA	NA
WP_000034825.1|1361964_1362174_+	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	78.1	2.7e-22
WP_000939747.1|1362227_1362611_-	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	53.6	6.8e-24
>prophage 103
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1367424	1369863	4639229		Stx2-converting_phage(50.0%)	2	NA	NA
WP_001092082.1|1367424_1368636_-	D-alanyl-D-alanine carboxypeptidase DacA	NA	B6DZZ7	Stx2-converting_phage	47.4	1.2e-101
WP_001231430.1|1368774_1369863_-	endolytic peptidoglycan transglycosylase RlpA	NA	F5B3X9	Synechococcus_phage	53.2	3.6e-09
>prophage 104
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1376873	1379456	4639229	tRNA	Staphylococcus_phage(100.0%)	1	NA	NA
WP_001340834.1|1376873_1379456_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	42.5	1.0e-184
>prophage 105
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1386395	1393686	4639229	transposase	Bathycoccus_sp._RCC1105_virus(33.33%)	7	NA	NA
WP_000367875.1|1386395_1388066_-	molecular chaperone HscC	NA	E5ESM6	Bathycoccus_sp._RCC1105_virus	32.6	4.0e-76
WP_001207520.1|1388149_1389085_-	pyrimidine-specific ribonucleoside hydrolase RihA	NA	NA	NA	NA	NA
WP_000631384.1|1389202_1389928_-	glutamate/aspartate ABC transporter ATP binding protein GltL	NA	G9BWD6	Planktothrix_phage	38.6	7.6e-32
WP_000272824.1|1389927_1390602_-	glutamate/aspartate ABC transporter permease GltK	NA	NA	NA	NA	NA
WP_000020941.1|1390601_1391342_-	glutamate/aspartate ABC transporter permease GltJ	NA	NA	NA	NA	NA
WP_001177086.1|1391511_1392420_-	glutamate/aspartate ABC transporter substrate-binding protein GltI	NA	NA	NA	NA	NA
WP_010723085.1|1392669_1393686_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
>prophage 106
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1397010	1398090	4639229		Pseudomonas_phage(100.0%)	1	NA	NA
WP_000490838.1|1397010_1398090_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	46.6	4.3e-47
>prophage 107
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1402185	1403850	4639229		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_000337077.1|1402185_1403850_-	asparagine synthase B	NA	A9YVS6	Ostreococcus_tauri_virus	39.5	6.1e-85
>prophage 108
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1408616	1412430	4639229	tRNA	Vibrio_phage(50.0%)	2	NA	NA
WP_038432907.1|1408616_1410563_+	PTS N-acetyl glucosamine transporter subunit IIABC	NA	A0A2I7SAJ6	Vibrio_phage	47.3	1.6e-07
WP_001287154.1|1410765_1412430_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	99.1	0.0e+00
>prophage 109
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1425728	1438449	4639229		Bacillus_phage(25.0%)	8	NA	NA
WP_000186076.1|1425728_1426406_-	two-component system response regulator KdpE	NA	W8CYM9	Bacillus_phage	30.6	2.0e-26
WP_001310640.1|1426402_1429087_-	two-component system sensor histidine kinase KdbD	NA	A0A1V0SGX0	Hokovirus	26.8	5.0e-12
WP_001300431.1|1429079_1429652_-	K(+)-transporting ATPase subunit C	NA	NA	NA	NA	NA
WP_000087939.1|1429660_1431709_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.0	2.4e-27
WP_000741129.1|1431731_1433405_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_001272653.1|1433404_1433494_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_000424924.1|1433806_1434013_+	YbfA family protein	NA	NA	NA	NA	NA
WP_000015200.1|1434255_1438449_+	rhs element protein RhsC	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	32.9	5.5e-26
>prophage 110
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1444179	1447229	4639229		Hokovirus(50.0%)	2	NA	NA
WP_000207142.1|1444179_1445598_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SGL1	Hokovirus	32.4	3.1e-61
WP_001032689.1|1445747_1447229_-	dipeptide permease DtpD	NA	A0A0P0IY73	Acinetobacter_phage	28.2	2.5e-45
>prophage 111
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1450607	1451399	4639229		Kaumoebavirus(100.0%)	1	NA	NA
WP_001113989.1|1450607_1451399_+	endonuclease VIII	NA	A0A1V0CNR6	Kaumoebavirus	27.5	7.5e-09
>prophage 112
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1487838	1491358	4639229		Vibrio_phage(33.33%)	4	NA	NA
WP_000345410.1|1487838_1488558_+	nicotinamide riboside transporter PnuC	NA	A0A126HGA3	Vibrio_phage	32.7	9.2e-22
WP_000951292.1|1488554_1489496_-	CDF family zinc transporter ZitB	NA	A0A1V0SED0	Indivirus	28.2	2.2e-23
WP_000784351.1|1489609_1489990_-	periplasmic protein	NA	NA	NA	NA	NA
WP_001109196.1|1490305_1491358_+	3-deoxy-7-phosphoheptulonate synthase AroG	NA	A0A2I6UFP9	Klebsiella_phage	49.4	3.4e-81
>prophage 113
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1495711	1502285	4639229		Tupanvirus(33.33%)	7	NA	NA
WP_001265438.1|1495711_1496728_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	46.0	6.1e-80
WP_000096869.1|1496988_1498461_-	molybdate ABC transporter ATP-binding protein ModF	NA	A0A1M7XV31	Cedratvirus	28.3	7.2e-13
WP_001147439.1|1498528_1499317_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_000891515.1|1499445_1499595_+	multidrug efflux pump accessory protein AcrZ	NA	NA	NA	NA	NA
WP_000101984.1|1499761_1500535_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000604034.1|1500534_1501224_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_000891692.1|1501226_1502285_+	molybdenum ABC transporter ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	35.9	1.5e-20
>prophage 114
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1512640	1513930	4639229		Klosneuvirus(100.0%)	1	NA	NA
WP_001295303.1|1512640_1513930_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.5	5.3e-20
>prophage 115
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1520411	1521320	4639229		Streptococcus_phage(100.0%)	1	NA	NA
WP_001295302.1|1520411_1521320_-	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	NA	A1IMD5	Streptococcus_phage	31.1	1.4e-27
>prophage 116
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1531917	1546729	4639229		Anomala_cuprea_entomopoxvirus(14.29%)	13	NA	NA
WP_000996107.1|1531917_1533654_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.8	2.3e-18
WP_001393495.1|1533646_1534642_-	secretion protein HlyD	NA	NA	NA	NA	NA
WP_001296991.1|1534644_1535316_-	DNA-binding transcriptional regulator CecR	NA	NA	NA	NA	NA
WP_000007101.1|1535544_1536909_+	ATP-dependent RNA helicase RhlE	NA	A0A1V0SBR7	Catovirus	31.8	1.5e-52
WP_001145126.1|1537140_1537623_-	N-glycosidase YbiA	NA	A0A0H3TLU0	Faustovirus	52.0	9.8e-36
WP_001340191.1|1537742_1539893_+	ATP-dependent DNA helicase DinG	NA	A0A127AW80	Bacillus_phage	26.1	3.7e-42
WP_000386551.1|1539920_1540883_+	DNA-binding protein YbiB	NA	NA	NA	NA	NA
WP_000443530.1|1541023_1542109_+	malate/lactate/ureidoglycolate dehydrogenase	NA	NA	NA	NA	NA
WP_000849301.1|1542337_1542598_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_000146343.1|1542862_1543129_-	C4-type zinc finger protein YbiI	NA	E5G6L7	Salmonella_phage	45.6	6.9e-07
WP_000990177.1|1543202_1543880_-	PKHD-type hydroxylase YbiX	NA	Q5GQB0	Synechococcus_phage	30.1	1.2e-18
WP_000430057.1|1543921_1546204_-	catecholate siderophore receptor Fiu	NA	NA	NA	NA	NA
WP_000710619.1|1546468_1546729_-	DUF1471 domain-containing protein	NA	A0A1B2ICL8	Erwinia_phage	51.0	1.6e-05
>prophage 117
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1550413	1555638	4639229		Planktothrix_phage(33.33%)	7	NA	NA
WP_000569083.1|1550413_1551136_-	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	42.7	5.6e-35
WP_001159065.1|1551132_1551792_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_000843866.1|1551930_1552677_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_000100800.1|1553080_1553584_-	DNA starvation/stationary phase protection protein Dps	NA	A0A222YYG6	Streptomyces_phage	29.0	4.9e-06
WP_001295297.1|1553882_1554770_-	threonine/homoserine exporter RhtA	NA	NA	NA	NA	NA
WP_120795379.1|1555004_1555070_+	protein YliM	NA	NA	NA	NA	NA
WP_001295296.1|1555122_1555638_+	outer membrane protein OmpX	NA	H6WZM8	Escherichia_phage	33.8	1.1e-16
>prophage 118
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1560635	1568977	4639229		Tupanvirus(33.33%)	6	NA	NA
WP_000961458.1|1560635_1562228_+	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	28.7	6.9e-62
WP_000168797.1|1562468_1563734_-	DUF1479 domain-containing protein	NA	NA	NA	NA	NA
WP_000114272.1|1563885_1564701_-	sugar-phosphatase YbiV	NA	NA	NA	NA	NA
WP_000209309.1|1564846_1567279_-	glycyl radical protein	NA	A0A076YHZ7	Citrobacter_phage	44.9	1.6e-09
WP_001295295.1|1567284_1568184_-	glycyl-radical enzyme activating protein	NA	NA	NA	NA	NA
WP_001336208.1|1568314_1568977_+	fructose-6-phosphate aldolase	NA	C7BV14	Synechococcus_phage	32.5	2.8e-25
>prophage 119
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1572192	1574064	4639229		Planktothrix_phage(100.0%)	1	NA	NA
WP_001301279.1|1572192_1574064_+	glutathione ABC transporter ATP-binding protein GsiA	NA	G9BWD6	Planktothrix_phage	29.7	5.2e-16
>prophage 120
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1585399	1586602	4639229		Stx2-converting_phage(100.0%)	1	NA	NA
WP_001300708.1|1585399_1586602_+	serine-type D-Ala-D-Ala carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	48.0	1.1e-99
>prophage 121
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1595168	1604318	4639229		Vibrio_phage(25.0%)	11	NA	NA
WP_001195240.1|1595168_1595426_-	glutaredoxin 1	NA	A0A2I7SAE2	Vibrio_phage	61.9	8.6e-23
WP_001201560.1|1595585_1595873_+	DUF1418 family protein	NA	NA	NA	NA	NA
WP_000189159.1|1595856_1596579_+	nitroreductase NfsA	NA	NA	NA	NA	NA
WP_000684321.1|1596639_1597542_+	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	34.4	2.6e-37
WP_000203025.1|1597629_1598106_+	YbjN domain-containing protein	NA	NA	NA	NA	NA
WP_000126072.1|1598456_1599569_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
WP_000996005.1|1599663_1600797_+	putrescine ABC transporter ATP-binding subunit PotG	NA	G3M9Y6	Bacillus_virus	34.0	1.4e-29
WP_000105430.1|1600806_1601760_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
WP_001061658.1|1601756_1602602_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
WP_000389260.1|1602661_1603150_+	YbjO family protein	NA	NA	NA	NA	NA
WP_001149682.1|1603190_1604318_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A1X9I6F4	Streptococcus_phage	27.3	1.0e-27
>prophage 122
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1607678	1610416	4639229		Planktothrix_phage(50.0%)	4	NA	NA
WP_000027205.1|1607678_1608407_-	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	36.7	6.0e-29
WP_001270734.1|1608624_1609140_-	lipoprotein	NA	NA	NA	NA	NA
WP_001160737.1|1609265_1609589_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001252135.1|1609585_1610416_+	N-acetylmuramoyl-L-alanine amidase AmiD	NA	A0A1B0UZW5	Roseobacter_phage	30.0	5.7e-07
>prophage 123
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1614003	1615722	4639229		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
WP_000815337.1|1614003_1615722_-	ubiquinone-dependent pyruvate dehydrogenase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.0	2.3e-31
>prophage 124
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1625019	1648704	4639229	tRNA,protease	uncultured_Mediterranean_phage(16.67%)	16	NA	NA
WP_000188144.1|1625019_1626966_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.1	1.1e-37
WP_000410785.1|1627038_1627263_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	2.3e-16
WP_000520781.1|1627585_1627906_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.6e-13
WP_000934041.1|1627936_1630213_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.5	1.9e-166
WP_001040187.1|1630897_1631116_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_001241678.1|1631400_1632105_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001202177.1|1632146_1633868_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	25.2	4.9e-21
WP_001043598.1|1633868_1635635_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	24.3	7.0e-23
WP_000537418.1|1635757_1636723_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.6	8.5e-63
WP_000228473.1|1637267_1637762_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_000076967.1|1637896_1641886_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.7	1.2e-86
WP_001295343.1|1642044_1642656_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_000067755.1|1642666_1644010_+	replication-associated recombination protein RarA	NA	G3MBE0	Bacillus_virus	40.8	2.1e-80
WP_000886683.1|1644100_1645393_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.2	1.5e-94
WP_000850303.1|1645631_1648076_+	dimethylsulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.8	6.6e-221
WP_000213098.1|1648086_1648704_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	60.6	5.0e-77
>prophage 125
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1655012	1655753	4639229		Tetraselmis_virus(100.0%)	1	NA	NA
WP_000111043.1|1655012_1655753_-	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	26.5	8.0e-21
>prophage 126
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1664766	1665855	4639229		Streptococcus_phage(100.0%)	1	NA	NA
WP_000057138.1|1664766_1665855_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	46.8	3.5e-81
>prophage 127
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1670941	1675483	4639229		Bacillus_phage(100.0%)	3	NA	NA
WP_000167336.1|1670941_1671226_+	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	3.2e-10
WP_000705764.1|1671433_1673698_+	ComEC family protein	NA	NA	NA	NA	NA
WP_000551270.1|1673734_1675483_+	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	29.8	2.5e-57
>prophage 128
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1690188	1701158	4639229	tRNA	Rhodobacter_phage(20.0%)	8	NA	NA
WP_001295932.1|1690188_1690737_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	7.0e-06
WP_001109486.1|1690763_1691411_+	hydroxyacylglutathione hydrolase GloC	NA	NA	NA	NA	NA
WP_000462687.1|1691632_1692823_-	aspartate transaminase	NA	NA	NA	NA	NA
WP_000977920.1|1693007_1694096_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	54.3	1.8e-98
WP_000117881.1|1694698_1696099_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	36.1	5.3e-82
WP_001307697.1|1696267_1697470_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000193841.1|1697735_1700348_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	7.0e-19
WP_001090506.1|1700390_1701158_-	aliphatic sulfonates ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.0	5.7e-30
>prophage 129
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1715770	1717678	4639229		Tupanvirus(100.0%)	1	NA	NA
WP_000053099.1|1715770_1717678_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.9e-54
>prophage 130
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1730277	1732332	4639229		Bacillus_phage(100.0%)	1	NA	NA
WP_001295354.1|1730277_1732332_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.9	5.9e-21
>prophage 131
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1736565	1737225	4639229	protease	uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000375136.1|1736565_1737225_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	55.3	4.0e-48
>prophage 132
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1757267	1769582	4639229		Morganella_phage(20.0%)	13	NA	NA
WP_000066490.1|1757267_1757480_+	cold shock protein CspG	NA	A0A1W6JNX5	Morganella_phage	71.4	7.8e-22
WP_071524879.1|1757490_1757679_+	cold-shock protein	NA	NA	NA	NA	NA
WP_001309400.1|1757653_1757884_+	protein YmcE	NA	NA	NA	NA	NA
WP_001019197.1|1757873_1758047_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_000829662.1|1758095_1759169_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_001300633.1|1759240_1761985_-	TMAO reductase system sensor histidine kinase/response regulator TorS	NA	A0A1V0SGX0	Hokovirus	32.2	2.7e-37
WP_001264933.1|1762067_1763096_+	TMAO reductase system periplasmic protein TorT	NA	NA	NA	NA	NA
WP_001120125.1|1763068_1763761_-	two-component system response regulator TorR	NA	W8CYM9	Bacillus_phage	28.0	4.5e-18
WP_001230242.1|1763890_1765063_+	pentaheme c-type cytochrome TorC	NA	NA	NA	NA	NA
WP_001062091.1|1765062_1767609_+	trimethylamine-N-oxide reductase TorA	NA	A0A077SK27	Escherichia_phage	29.3	1.2e-71
WP_000209894.1|1767605_1768205_+	molecular chaperone TorD	NA	NA	NA	NA	NA
WP_000024560.1|1768356_1768662_-	chaperone modulator CbpM	NA	NA	NA	NA	NA
WP_000420621.1|1768661_1769582_-	curved DNA-binding protein	NA	A0A1V0SIM1	Klosneuvirus	43.0	4.2e-11
>prophage 133
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1773887	1776161	4639229		Enterobacteria_phage(100.0%)	3	NA	NA
WP_001273658.1|1773887_1774061_+	general stress protein	NA	Q9KX95	Enterobacteria_phage	96.3	4.9e-06
WP_001326838.1|1774317_1775646_-	pyrimidine utilization transport protein G	NA	Q9KX94	Enterobacteria_phage	99.1	3.7e-234
WP_001028083.1|1775666_1776161_-	pyrimidine utilization flavin reductase protein F	NA	Q9KX93	Enterobacteria_phage	96.9	1.1e-50
>prophage 134
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1790798	1791863	4639229		Cronobacter_phage(100.0%)	1	NA	NA
WP_000258765.1|1790798_1791863_+	phosphate starvation-inducible protein PhoH	NA	R4II13	Cronobacter_phage	76.7	1.1e-90
>prophage 135
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1798682	1801244	4639229	transposase	Bacillus_phage(50.0%)	2	NA	NA
WP_000409873.1|1798682_1800041_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.2	1.9e-20
WP_085947771.1|1800081_1801244_-|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
>prophage 136
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1806657	1807491	4639229		Pelagibacter_phage(100.0%)	1	NA	NA
WP_001189321.1|1806657_1807491_-	curli production assembly/transport protein CsgG	NA	M1ICK2	Pelagibacter_phage	40.1	5.1e-40
>prophage 137
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1811626	1812160	4639229		Red_sea_bream_iridovirus(100.0%)	1	NA	NA
WP_000857405.1|1811626_1812160_+	O-acetyl-ADP-ribose deacetylase	NA	Q71G61	Red_sea_bream_iridovirus	40.2	5.9e-26
>prophage 138
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1821468	1822389	4639229		Morganella_phage(100.0%)	1	NA	NA
WP_000183364.1|1821468_1822389_-	kdo(2)-lipid IV(A) lauroyltransferase	NA	A0A1W6JP29	Morganella_phage	41.5	8.6e-57
>prophage 139
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1827048	1827294	4639229		Salmonella_phage(100.0%)	1	NA	NA
WP_001217754.1|1827048_1827294_-	DNA damage-inducible protein I	NA	H6WRY5	Salmonella_phage	48.7	7.7e-13
>prophage 140
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1843177	1844119	4639229		Brevibacillus_phage(100.0%)	1	NA	NA
WP_001295441.1|1843177_1844119_+	flagellar assembly peptidoglycan hydrolase FlgJ	NA	S5M633	Brevibacillus_phage	31.3	3.6e-10
>prophage 141
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1856476	1857658	4639229		Trichoplusia_ni_ascovirus(50.0%)	2	NA	NA
WP_001008535.1|1856476_1857211_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	34.1	1.3e-15
WP_000103754.1|1857421_1857658_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	45.2	1.5e-10
>prophage 142
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1860930	1862573	4639229		Pseudomonas_phage(50.0%)	2	NA	NA
WP_001257000.1|1860930_1861572_+	dTMP kinase	NA	Q2Z0N0	Pseudomonas_phage	36.9	4.5e-28
WP_001267956.1|1861568_1862573_+	DNA polymerase III subunit delta'	NA	A0A1U9WR94	Streptococcus_virus	31.8	6.4e-05
>prophage 143
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1874879	1875137	4639229		Erwinia_phage(100.0%)	1	NA	NA
WP_000800153.1|1874879_1875137_+	multiple stress resistance protein BhsA	NA	A0A1B2IFR9	Erwinia_phage	37.1	9.6e-06
>prophage 144
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1882425	1886166	4639229		Planktothrix_phage(50.0%)	4	NA	NA
WP_001033694.1|1882425_1883127_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	40.3	1.1e-35
WP_001251348.1|1883126_1884371_+	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA	NA
WP_000291270.1|1884399_1885311_+	N-acetylglucosamine kinase	NA	NA	NA	NA	NA
WP_000952737.1|1885326_1886166_+	NAD-dependent protein deacylase	NA	A0A2I7S9Y2	Vibrio_phage	35.6	5.7e-23
>prophage 145
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1889423	1891401	4639229		Mycoplasma_phage(100.0%)	2	NA	NA
WP_000799401.1|1889423_1890281_-	spermidine/putrescine ABC transporter permease PotB	NA	Q6GZ02	Mycoplasma_phage	28.7	6.7e-11
WP_000531594.1|1890264_1891401_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	NA	Q6GZ03	Mycoplasma_phage	39.8	5.5e-29
>prophage 146
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1896422	1919866	4639229	integrase,portal,tRNA,plate,tail	Shigella_phage(23.81%)	34	1890468:1890482	1926569:1926583
1890468:1890482	attL	CTTCAGCGTGGTTGT	NA	NA	NA	NA
WP_000423742.1|1896422_1897793_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	44.9	1.2e-107
WP_001297479.1|1897796_1898438_-	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_001297484.1|1898473_1899580_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000476093.1|1899633_1900095_-	phosphatase NudJ	NA	NA	NA	NA	NA
WP_001248691.1|1900104_1900758_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_000444484.1|1900929_1902180_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	96.3	1.9e-22
WP_000241967.1|1902673_1903339_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010723094.1|1903339_1904044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001257372.1|1904501_1905395_+	cell death peptidase Lit	NA	NA	NA	NA	NA
WP_000741310.1|1905485_1906613_-|integrase	tyrosine-type recombinase/integrase	integrase	O21925	Phage_21	61.5	7.2e-122
WP_000939945.1|1906593_1906839_-	excisionase-like protein from lambdoid prophage 14	NA	NA	NA	NA	NA
WP_011443584.1|1906875_1907187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010723095.1|1907303_1907645_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001005353.1|1907582_1907891_-	hypothetical protein	NA	I6PDF6	Cronobacter_phage	80.0	3.8e-09
WP_000848748.1|1908065_1908740_-	LexA family transcriptional repressor	NA	U5P0T5	Shigella_phage	100.0	1.2e-132
WP_000649480.1|1908830_1909031_+	transcriptional regulator	NA	U5P445	Shigella_phage	98.5	1.9e-30
WP_000515837.1|1909074_1909632_+	protein YmfL	NA	S5FXP0	Shigella_phage	95.7	7.4e-96
WP_001250269.1|1909807_1909987_+	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	68.5	7.8e-15
WP_000104929.1|1909976_1911344_+	GntR family transcriptional regulator	NA	A0A1C9IIA1	Salmonella_phage	99.2	5.1e-223
WP_000605606.1|1911355_1911538_+	hypothetical protein	NA	S5FXQ9	Shigella_phage	100.0	1.7e-25
WP_001350502.1|1911537_1912011_+|portal	phage portal protein	portal	A0A1B5FP95	Escherichia_phage	100.0	3.6e-75
WP_001350503.1|1911937_1912729_+|plate	baseplate J/gp47 family protein	plate	M1FQW3	Enterobacteria_phage	97.3	4.7e-144
WP_000383574.1|1912719_1913304_+	YmfQ family protein	NA	O22003	Shigella_phage	98.5	2.0e-112
WP_000554703.1|1913307_1913937_+	hypothetical protein	NA	M1FN94	Enterobacteria_phage	95.4	1.1e-52
WP_010723096.1|1913938_1914352_+|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	53.6	7.1e-27
WP_000548498.1|1914323_1914926_-|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	83.5	9.2e-92
WP_024184299.1|1914925_1915420_-|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	57.0	3.7e-46
WP_000905001.1|1915491_1916046_+	site-specific DNA recombinase	NA	A0A1S6L009	Salmonella_phage	88.3	2.8e-87
WP_000557907.1|1916152_1916986_+	5-methylcytosine-specific endonuclease McrA	NA	NA	NA	NA	NA
WP_000943927.1|1917219_1917384_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	96.3	4.2e-23
WP_001295666.1|1917486_1917810_-	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	65.4	3.0e-41
WP_032082692.1|1918346_1918457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000373101.1|1918509_1918914_-	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
WP_000332303.1|1919134_1919866_-	DNA-binding transcriptional repressor BluR	NA	Q9EYF2	Enterobacteria_phage	50.5	2.7e-53
1926569:1926583	attR	ACAACCACGCTGAAG	NA	NA	NA	NA
>prophage 147
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1926940	1928029	4639229		Escherichia_phage(100.0%)	1	NA	NA
WP_071524883.1|1926940_1928029_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	41.9	8.3e-75
>prophage 148
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1936573	1938261	4639229		Morganella_phage(50.0%)	2	NA	NA
WP_000897378.1|1936573_1936993_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	62.1	6.9e-38
WP_000457616.1|1936992_1938261_+	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	83.4	7.9e-210
>prophage 149
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1964930	1967682	4639229		uncultured_Caudovirales_phage(50.0%)	2	NA	NA
WP_001033352.1|1964930_1966610_-	C4-dicarboxylic acid transporter DauA	NA	A0A2H4J153	uncultured_Caudovirales_phage	23.6	1.3e-23
WP_001298109.1|1966734_1967682_-	ribose-phosphate diphosphokinase	NA	A0A2K9L2G2	Tupanvirus	37.8	3.9e-44
>prophage 150
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1970818	1974826	4639229		Pseudomonas_phage(50.0%)	5	NA	NA
WP_000804726.1|1970818_1971901_+	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	41.6	1.5e-07
WP_000456467.1|1971900_1972734_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_000200374.1|1972730_1973123_+	SirB family protein	NA	NA	NA	NA	NA
WP_001257044.1|1973126_1973936_+	tetratricopeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_000811065.1|1973971_1974826_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	39.0	8.3e-46
>prophage 151
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1977925	1978156	4639229		Spodoptera_litura_granulovirus(100.0%)	1	NA	NA
WP_001146444.1|1977925_1978156_+	putative cation transport regulator ChaB	NA	A5IZT6	Spodoptera_litura_granulovirus	40.0	8.5e-06
>prophage 152
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	1989410	1999951	4639229		Escherichia_phage(25.0%)	10	NA	NA
WP_000702650.1|1989410_1990949_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	40.8	6.3e-20
WP_000571681.1|1990945_1991656_+	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA	NA
WP_001160108.1|1991655_1992333_+	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA	NA
WP_000555857.1|1993588_1994431_-	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	47.6	1.1e-13
WP_001307143.1|1994480_1994939_-	YchJ family protein	NA	NA	NA	NA	NA
WP_001295622.1|1995051_1995957_+	patatin-like phospholipase RssA	NA	NA	NA	NA	NA
WP_000193447.1|1996048_1997062_+	two-component system response regulator RssB	NA	NA	NA	NA	NA
WP_000718995.1|1997263_1998172_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	46.8	1.4e-59
WP_001287378.1|1998315_1998729_-	DNA-binding transcriptional regulator H-NS	NA	NA	NA	NA	NA
WP_000068077.1|1999333_1999951_+	thymidine kinase	NA	A0A0A0YP64	Citrobacter_phage	53.6	1.3e-53
>prophage 153
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2009361	2011376	4639229		Planktothrix_phage(50.0%)	2	NA	NA
WP_000110948.1|2009361_2010375_+	murein tripeptide/oligopeptide ABC transporter ATP binding protein OppD	NA	G9BWD6	Planktothrix_phage	31.7	5.8e-14
WP_000994906.1|2010371_2011376_+	murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF	NA	G3M9Y6	Bacillus_virus	30.7	2.3e-15
>prophage 154
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2023034	2025992	4639229		Acinetobacter_phage(100.0%)	2	NA	NA
WP_001340286.1|2023034_2024393_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	A0A0P0IR83	Acinetobacter_phage	40.7	3.3e-36
WP_000763511.1|2024396_2025992_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	NA	A0A0N7IRD9	Acinetobacter_phage	38.5	3.8e-52
>prophage 155
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2032961	2038253	4639229	protease	Chrysochromulina_ericina_virus(33.33%)	4	NA	NA
WP_000559286.1|2032961_2033720_-	YciK family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	23.9	4.4e-06
WP_000422045.1|2033939_2034989_+|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	31.5	1.3e-21
WP_001031530.1|2035024_2035276_-	YciN family protein	NA	NA	NA	NA	NA
WP_001297122.1|2035655_2038253_+	type I DNA topoisomerase	NA	A0A2K9L1Q2	Tupanvirus	34.7	1.7e-86
>prophage 156
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2043177	2043768	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001176295.1|2043177_2043768_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.9	7.7e-43
>prophage 157
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2051585	2057242	4639229		Lactococcus_phage(50.0%)	5	NA	NA
WP_000484984.1|2051585_2053520_-	exoribonuclease II	NA	Q0GXV6	Lactococcus_phage	27.9	3.1e-32
WP_001335988.1|2053587_2054715_-	CMD domain-containing protein	NA	NA	NA	NA	NA
WP_000506490.1|2054858_2055647_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000565727.1|2056014_2056368_-	DUF559 domain-containing protein	NA	NA	NA	NA	NA
WP_000573407.1|2056435_2057242_-	peptide ABC transporter ATP-binding protein SapF	NA	G3M9Y6	Bacillus_virus	28.6	7.2e-15
>prophage 158
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2070157	2071423	4639229		Klosneuvirus(100.0%)	1	NA	NA
WP_000069229.1|2070157_2071423_+	4-aminobutyrate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.0	2.0e-24
>prophage 159
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2100683	2141501	4639229	lysis,integrase,tRNA,transposase,tail	Escherichia_phage(45.16%)	43	2101830:2101848	2132205:2132223
WP_010723085.1|2100683_2101700_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
2101830:2101848	attL	GCTTATTCGCACCTTCCCT	NA	NA	NA	NA
WP_000605090.1|2101972_2102230_+	DUF2534 family protein	NA	NA	NA	NA	NA
WP_001262123.1|2102279_2103230_-	universal stress protein UspE	NA	NA	NA	NA	NA
WP_000611911.1|2103381_2104134_-	fumarate/nitrate reduction transcriptional regulator Fnr	NA	NA	NA	NA	NA
WP_000945011.1|2104328_2104844_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.8	1.1e-24
WP_000062973.1|2104854_2106381_-	p-aminobenzoyl-glutamate transporter	NA	NA	NA	NA	NA
WP_001156451.1|2106417_2107863_-	p-aminobenzoyl-glutamate hydrolase subunit AbgB	NA	NA	NA	NA	NA
WP_000444929.1|2107862_2109173_-	p-aminobenzoyl-glutamate hydrolase subunit AbgA	NA	NA	NA	NA	NA
WP_000885458.1|2109348_2110257_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001046829.1|2110586_2111150_+	DNA endonuclease SmrA	NA	NA	NA	NA	NA
WP_000628058.1|2111170_2112403_-	diguanylate cyclase DgcM	NA	A0A127AWB9	Bacillus_phage	39.5	3.1e-17
WP_000387388.1|2112657_2113641_+	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_000123737.1|2114118_2115492_+	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
WP_001157406.1|2115620_2116556_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	98.8	5.9e-146
WP_000040852.1|2116607_2117843_-|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	98.8	5.5e-240
WP_000079604.1|2117844_2118060_-	excisionase XisR	NA	A0A0U2RY08	Escherichia_phage	100.0	1.8e-37
WP_000276809.1|2118138_2118348_-	double-strand break reduction protein RcbA	NA	A0A0U2QL97	Escherichia_phage	98.4	6.1e-27
WP_001317028.1|2118340_2118535_-	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	NA	A0A0U2QQP4	Escherichia_phage	96.9	5.8e-32
WP_000166319.1|2118591_2119401_-	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.5	8.8e-106
WP_000105143.1|2119393_2121994_-	exodeoxyribonuclease VIII	NA	A0A0U2I1R6	Escherichia_phage	63.5	5.1e-248
WP_000632297.1|2122095_2122371_-	protein RacC	NA	A0A0U2QW85	Escherichia_phage	96.7	1.4e-42
WP_001352098.1|2122445_2122616_-	conserved protein, Rac prophage	NA	A0A0U2SHB5	Escherichia_phage	71.4	3.6e-17
WP_000560225.1|2122615_2122837_-	killing protein KilR	NA	A0A0U2RTC4	Escherichia_phage	97.3	4.9e-35
WP_001312793.1|2123278_2123767_+	superinfection exclusion protein B	NA	NA	NA	NA	NA
WP_001169151.1|2123763_2123919_-	YdaF family protein	NA	M4QQ57	Salicola_phage	55.3	6.1e-08
WP_000948459.1|2124372_2124849_-	DNA-binding transcriptional repressor RacR	NA	A0A2D1GNH0	Pseudomonas_phage	53.4	2.2e-11
WP_000712069.1|2124972_2125269_+	toxin YdaS	NA	A0A0R6PH31	Moraxella_phage	44.9	9.6e-10
WP_000693797.1|2125291_2125714_+	phage protein	NA	A0A0U2RXZ9	Escherichia_phage	95.0	1.5e-69
WP_000899748.1|2125726_2126584_+	DUF1376 domain-containing protein	NA	A0A0U2RT81	Escherichia_phage	84.5	8.3e-70
WP_000788970.1|2126590_2127337_+	ATP-binding protein	NA	V5UQI5	Shigella_phage	78.9	3.8e-111
WP_000450663.1|2127359_2127920_+	DUF1627 domain-containing protein	NA	A0A0U2SAW4	Escherichia_phage	88.1	1.9e-67
WP_001228696.1|2128007_2128193_+|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.2	2.8e-15
WP_001097895.1|2128389_2129847_+	Trk system potassium uptake protein TrkG	NA	NA	NA	NA	NA
WP_001350510.1|2129984_2130248_+	ParB N-terminal domain-containing protein	NA	A0A0R6PD10	Moraxella_phage	56.1	6.3e-21
WP_000091628.1|2130228_2130588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000019448.1|2132353_2133334_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.1	8.9e-185
2132205:2132223	attR	AGGGAAGGTGCGAATAAGC	NA	NA	NA	NA
WP_000279097.1|2133656_2137019_+|tail	side tail fiber protein	tail	X2KTY7	Enterobacteria_phage	36.4	8.1e-12
WP_001698950.1|2137018_2137594_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	94.8	2.5e-102
WP_000086527.1|2137691_2138282_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000836770.1|2138598_2138832_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	87.0	5.4e-32
WP_120795384.1|2138900_2139014_-	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_001300461.1|2139792_2140227_-	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.8	1.8e-28
WP_000837921.1|2140367_2141501_-	porin OmpN	NA	Q1MVN1	Enterobacteria_phage	58.5	1.1e-117
>prophage 160
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2146461	2147451	4639229		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000762236.1|2146461_2147451_-	D-lactate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	44.0	1.5e-70
>prophage 161
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2172528	2175117	4639229	transposase	Shigella_phage(50.0%)	2	NA	NA
WP_085947917.1|2172528_2173802_-|transposase	IS3-like element IS2 family transposase	transposase	Q9ZXG3	Shigella_phage	99.3	1.4e-177
WP_001254932.1|2173965_2175117_+|transposase	IS30-like element IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	2.0e-42
>prophage 162
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2187668	2191571	4639229		Klosneuvirus(100.0%)	1	NA	NA
WP_000139543.1|2187668_2191571_+	ATP-dependent RNA helicase HrpA	NA	A0A1V0SIV3	Klosneuvirus	29.5	2.2e-53
>prophage 163
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2195509	2196458	4639229		Escherichia_phage(50.0%)	2	NA	NA
WP_000428998.1|2195509_2196040_+	cytochrome b561	NA	A0A0U2QLA7	Escherichia_phage	44.9	3.1e-19
WP_000731833.1|2196284_2196458_+	periplasmic protein	NA	A0A0R6PKG1	Moraxella_phage	67.4	4.4e-07
>prophage 164
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2208264	2218438	4639229	transposase	Escherichia_phage(20.0%)	10	NA	NA
WP_000826416.1|2208264_2209473_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	93.0	1.7e-206
WP_001326689.1|2209512_2210727_-	BenE family transporter YdcO	NA	NA	NA	NA	NA
WP_000429155.1|2210779_2211316_+	DNA-binding transcriptional regulator SutR	NA	NA	NA	NA	NA
WP_001303492.1|2211388_2213350_+	23S rRNA 5-hydroxycytidine C2501 synthase	NA	Q6DW11	Phage_TP	28.3	3.5e-23
WP_000494244.1|2213441_2213672_-	YncJ family protein	NA	NA	NA	NA	NA
WP_000813794.1|2213893_2214070_+	type II toxin-antitoxin system mRNA interferase toxin HicA	NA	A0A0M3LQ86	Mannheimia_phage	57.9	3.6e-12
WP_001270286.1|2214115_2214532_+	type II toxin-antitoxin system antitoxin HicB	NA	F1C593	Cronobacter_phage	57.8	6.3e-31
WP_000760626.1|2214610_2216017_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_000047424.1|2216261_2217407_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000220396.1|2217424_2218438_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	37.9	2.1e-27
>prophage 165
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2225570	2227673	4639229		Salmonella_phage(100.0%)	1	NA	NA
WP_000689363.1|2225570_2227673_-	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	65.3	5.3e-134
>prophage 166
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2241916	2243461	4639229		Escherichia_phage(100.0%)	1	NA	NA
WP_000702535.1|2241916_2243461_-	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	39.2	6.4e-20
>prophage 167
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2250345	2250636	4639229		Enterobacteria_phage(100.0%)	1	NA	NA
WP_000768384.1|2250345_2250636_-	lipoprotein	NA	Q1MVN1	Enterobacteria_phage	65.1	2.1e-25
>prophage 168
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2257005	2258446	4639229		Escherichia_phage(50.0%)	2	NA	NA
WP_000781370.1|2257005_2257290_-	HigA family addiction module antidote protein	NA	A0A2L1IV52	Escherichia_phage	51.1	1.2e-20
WP_000642433.1|2257435_2258446_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	25.3	9.6e-25
>prophage 169
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2261719	2263625	4639229		Planktothrix_phage(100.0%)	2	NA	NA
WP_001285536.1|2261719_2262646_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.6	4.1e-14
WP_000193547.1|2262638_2263625_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.7	1.4e-17
>prophage 170
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2267941	2271748	4639229		Klosneuvirus(50.0%)	2	NA	NA
WP_001360132.1|2267941_2270341_-	oxygen-sensing cyclic-di-GMP phosphodiesterase	NA	A0A1V0SL97	Klosneuvirus	22.0	1.6e-09
WP_000426292.1|2270365_2271748_-	diguanylate cyclase DosC	NA	G3MA91	Bacillus_virus	31.5	2.0e-17
>prophage 171
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2277014	2283950	4639229		Powai_lake_megavirus(50.0%)	3	NA	NA
WP_010723101.1|2277014_2279810_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	24.0	5.7e-19
WP_000832437.1|2279854_2282227_-	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA	NA
WP_000628576.1|2282264_2283950_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	23.3	2.2e-10
>prophage 172
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2297272	2298673	4639229		Escherichia_phage(100.0%)	1	NA	NA
WP_001083595.1|2297272_2298673_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	49.2	4.0e-106
>prophage 173
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2306097	2307633	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001194860.1|2306097_2307633_+	autoinducer 2 ABC transporter ATP-binding protein LsrA	NA	A0A2H4PQG7	Staphylococcus_phage	30.4	4.4e-21
>prophage 174
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2315514	2316462	4639229		Bacillus_virus(100.0%)	1	NA	NA
WP_000878968.1|2315514_2316462_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	29.6	7.3e-19
>prophage 175
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2324181	2324565	4639229		Streptococcus_phage(100.0%)	1	NA	NA
WP_000091199.1|2324181_2324565_+	MDR efflux pump AcrAB transcriptional activator MarA	NA	D0R0F8	Streptococcus_phage	32.3	4.7e-09
>prophage 176
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2327567	2328458	4639229		Bacillus_phage(100.0%)	1	NA	NA
WP_000592814.1|2327567_2328458_-	diguanylate cyclase DgcZ	NA	A0A127AWB9	Bacillus_phage	37.7	8.2e-20
>prophage 177
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2333822	2353271	4639229	lysis,tail	Enterobacteria_phage(39.13%)	36	NA	NA
WP_000214712.1|2333822_2334026_+	putative selenium delivery protein YdfZ	NA	J9Q802	Salmonella_phage	55.2	1.6e-11
WP_000527743.1|2334060_2335521_-	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	29.6	4.3e-42
WP_000347482.1|2335609_2336893_-	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_120795384.1|2337497_2337611_+	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000836768.1|2337679_2337913_+	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_000078177.1|2338229_2338820_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000885611.1|2338917_2339493_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	95.3	6.5e-103
WP_001027733.1|2339492_2340455_-|tail	tail fiber protein	tail	K7PHC9	Enterobacteria_phage	70.9	4.1e-41
WP_000453612.1|2340405_2340975_-	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	1.5e-91
WP_001368374.1|2341363_2341597_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	84.1	2.5e-21
WP_000373090.1|2341654_2342065_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	79.4	2.5e-56
WP_001019606.1|2342216_2342390_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_001309517.1|2342561_2342717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120795388.1|2342795_2342861_-	Qin prophage; protein YnfR	NA	NA	NA	NA	NA
WP_071524604.1|2342863_2343052_-	cold-shock protein	NA	NA	NA	NA	NA
WP_000066495.1|2343062_2343275_-	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_001071769.1|2343637_2344135_-	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	29.5	2.9e-06
WP_001092971.1|2344131_2344665_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	93.2	6.4e-97
WP_000189916.1|2344661_2344973_-	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	64.6	2.0e-26
WP_000839590.1|2344977_2345193_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	94.4	1.1e-31
WP_000066484.1|2345946_2346162_-	cold shock-like protein CspB	NA	A0A1W6JNX5	Morganella_phage	76.5	3.4e-25
WP_000087756.1|2346462_2346675_+	cold shock-like protein CspF	NA	NA	NA	NA	NA
WP_120795389.1|2346729_2346819_+	Qin prophage; protein YnfS	NA	NA	NA	NA	NA
WP_001047135.1|2347096_2347849_-	antitermination protein	NA	A0A192Y5X6	Salmonella_phage	92.8	7.1e-134
WP_001393597.1|2347862_2348912_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	57.3	5.7e-113
WP_012304870.1|2348913_2349192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000980994.1|2349258_2349510_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813254.1|2349726_2349882_-	type I toxin-antitoxin system toxin HokD	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
WP_000323025.1|2349953_2350241_-	type II toxin-antitoxin system mRNA interferase RelE	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
WP_000534858.1|2350240_2350480_-	type II toxin-antitoxin system antitoxin RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
WP_001326990.1|2350504_2350810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001301033.1|2351012_2351345_+	protein FlxA	NA	NA	NA	NA	NA
WP_011443592.1|2351781_2351931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000920568.1|2352227_2352458_-	dicB transcriptional regulator DicC	NA	NA	NA	NA	NA
WP_000448564.1|2352541_2352949_+	DNA-binding transcriptional dual regulator DicA	NA	K7PM82	Enterobacteria_phage	54.7	4.4e-13
WP_000379575.1|2353115_2353271_+	DUF1391 family protein	NA	M4QQ57	Salicola_phage	53.2	3.0e-07
>prophage 178
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2357503	2369728	4639229		Escherichia_phage(57.14%)	12	NA	NA
WP_000836066.1|2357503_2358523_-	Zn-dependent oxidoreductase	NA	E3SJ82	Synechococcus_phage	26.2	4.3e-17
WP_001295394.1|2358534_2359749_-	starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.0	1.4e-46
WP_000598292.1|2359954_2360281_-	YnfA family protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
WP_000705211.1|2360415_2360757_+	DUF1283 family protein	NA	NA	NA	NA	NA
WP_001138581.1|2360791_2361352_+	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
WP_001321287.1|2361354_2362065_-	YnfC family lipoprotein	NA	NA	NA	NA	NA
WP_001300836.1|2362172_2362478_+	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
WP_000041675.1|2362676_2365103_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.2	7.7e-214
WP_001340362.1|2365163_2367587_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	48.6	1.7e-208
WP_000213028.1|2367597_2368215_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
WP_000526503.1|2368216_2369071_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000148710.1|2369113_2369728_+	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	36.3	8.7e-29
>prophage 179
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2387489	2388791	4639229		Bacillus_phage(100.0%)	1	NA	NA
WP_000732512.1|2387489_2388791_+	two-component system sensor histidine kinase RstB	NA	W8CYF6	Bacillus_phage	24.2	3.2e-17
>prophage 180
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2398867	2400679	4639229		Vaccinia_virus(100.0%)	1	NA	NA
WP_000945878.1|2398867_2400679_-	beta-glucuronidase	NA	B9U1V4	Vaccinia_virus	100.0	0.0e+00
>prophage 181
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2420555	2421830	4639229	tRNA	Cronobacter_phage(100.0%)	1	NA	NA
WP_001295400.1|2420555_2421830_-|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	41.4	8.8e-84
>prophage 182
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2428741	2430240	4639229		Salmonella_phage(50.0%)	2	NA	NA
WP_001296937.1|2428741_2429263_-	superoxide dismutase [Cu-Zn] SodC2	NA	Q9MC02	Salmonella_phage	55.7	7.8e-47
WP_000250656.1|2429343_2430240_-	aldo/keto reductase family oxidoreductase	NA	A0A1V0SDE7	Indivirus	30.8	4.7e-07
>prophage 183
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2439042	2447850	4639229		Streptomyces_phage(20.0%)	9	NA	NA
WP_000101193.1|2439042_2439858_+	peptidoglycan DD-endopeptidase MepH	NA	A0A2H5BM69	Streptomyces_phage	42.7	1.7e-19
WP_000007283.1|2439985_2440567_+	superoxide dismutase [Fe]	NA	Q56AR7	Bacillus_thuringiensis_phage	46.0	2.6e-43
WP_000701040.1|2440728_2441898_-	MFS transporter	NA	NA	NA	NA	NA
WP_000102278.1|2442063_2442153_-	stress response protein YnhF	NA	NA	NA	NA	NA
WP_000190982.1|2442451_2443477_+	HTH-type transcriptional repressor PurR	NA	C6ZCU4	Enterobacteria_phage	31.6	3.7e-32
WP_000269501.1|2443473_2444406_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001182347.1|2444518_2445730_+	Bcr/CflA family multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_000098896.1|2446020_2447169_+	cyclopropane fatty acyl phospholipid synthase	NA	A0A2K9L4K8	Tupanvirus	45.4	9.3e-85
WP_000493947.1|2447208_2447850_-	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	35.2	7.4e-23
>prophage 184
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2453354	2455621	4639229		Edwardsiella_phage(50.0%)	3	NA	NA
WP_000587525.1|2453354_2454167_-	hypothetical protein	NA	A0A077K9W7	Edwardsiella_phage	35.9	5.0e-08
WP_001069979.1|2454170_2454956_-	thiosulfate reductase cytochrome B subunit	NA	NA	NA	NA	NA
WP_001310861.1|2454952_2455621_-	4Fe-4S dicluster domain-containing protein	NA	A0A077SL61	Escherichia_phage	37.2	1.0e-22
>prophage 185
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2463910	2468994	4639229		environmental_halophage(33.33%)	5	NA	NA
WP_000577988.1|2463910_2465131_-	cysteine desulfurase SufS	NA	Q2XUY6	environmental_halophage	41.4	4.4e-93
WP_000907979.1|2465127_2466399_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000948863.1|2466373_2467120_-	Fe-S cluster assembly ATPase SufC	NA	A0A285PWH2	Cedratvirus	31.4	8.4e-10
WP_000089364.1|2467129_2468617_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_000367160.1|2468625_2468994_-	Fe-S cluster assembly scaffold SufA	NA	A0A2H4N7N5	Lake_Baikal_phage	39.4	4.3e-15
>prophage 186
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2487584	2507178	4639229	tRNA	Tupanvirus(22.22%)	19	NA	NA
WP_000553704.1|2487584_2489285_+	medium-chain fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.3	3.0e-31
WP_000069375.1|2489341_2491720_-	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	36.7	9.4e-172
WP_000368046.1|2492052_2492886_+	posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR	NA	NA	NA	NA	NA
WP_001082229.1|2493042_2494089_+	3-deoxy-7-phosphoheptulonate synthase AroH	NA	S4W5F1	Pandoravirus	47.7	3.2e-84
WP_001270809.1|2494220_2494412_+	hemin uptake protein HemP	NA	NA	NA	NA	NA
WP_000175703.1|2494415_2495852_-	YdiU family protein	NA	NA	NA	NA	NA
WP_001300634.1|2495914_2496628_-	anti-FlhDC factor	NA	NA	NA	NA	NA
WP_001209795.1|2496874_2497339_-	endopeptidase	NA	S5MM68	Bacillus_phage	36.9	2.1e-11
WP_000029474.1|2497416_2498166_-	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	A0A2R8FG22	Brazilian_cedratvirus	28.2	9.3e-09
WP_001154168.1|2498165_2498717_-	bifunctional thioredoxin/glutathione peroxidase	NA	NA	NA	NA	NA
WP_000956528.1|2498779_2499760_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
WP_001229265.1|2499860_2500160_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.2e-13
WP_000672380.1|2500164_2502552_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000018596.1|2502566_2503550_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	38.5	1.4e-33
WP_001386830.1|2503833_2503878_-	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_000124850.1|2504000_2504357_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_001124225.1|2504409_2504607_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001700733.1|2504703_2505246_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.9	6.3e-15
WP_001144202.1|2505249_2507178_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.3	9.4e-130
>prophage 187
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2518474	2520736	4639229		Tupanvirus(100.0%)	1	NA	NA
WP_000077872.1|2518474_2520736_+	catalase HPII	NA	A0A2K9L572	Tupanvirus	48.5	1.3e-143
>prophage 188
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2527065	2527893	4639229		Bacillus_virus(100.0%)	1	NA	NA
WP_000175026.1|2527065_2527893_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	54.9	1.7e-72
>prophage 189
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2535369	2536590	4639229		Klosneuvirus(100.0%)	1	NA	NA
WP_000081983.1|2535369_2536590_-	succinylornithine/acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.1	5.5e-27
>prophage 190
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2543354	2544008	4639229		Planktothrix_phage(100.0%)	1	NA	NA
WP_001300558.1|2543354_2544008_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	29.2	1.2e-12
>prophage 191
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2549606	2551568	4639229		Streptococcus_phage(100.0%)	1	NA	NA
WP_001235800.1|2549606_2551568_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	29.2	3.2e-40
>prophage 192
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2556494	2560579	4639229		Tupanvirus(50.0%)	4	NA	NA
WP_001135066.1|2556494_2557136_+	bifunctional pyrazinamidase/nicotinamidase	NA	A0A2K9L2K0	Tupanvirus	34.9	2.2e-19
WP_000438807.1|2557228_2558587_-	MFS transporter	NA	NA	NA	NA	NA
WP_000719096.1|2558703_2559462_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_000723710.1|2559598_2560579_-	NADH-dependent methylglyoxal reductase	NA	A0A2H4PQR8	Staphylococcus_phage	21.5	2.3e-07
>prophage 193
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2569389	2570244	4639229		Indivirus(100.0%)	1	NA	NA
WP_001186371.1|2569389_2570244_-	methylglyoxal reductase YeaE	NA	A0A1V0SDE7	Indivirus	24.6	2.5e-10
>prophage 194
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2573562	2578139	4639229		Bacillus_phage(100.0%)	3	NA	NA
WP_000219687.1|2573562_2574846_+	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	36.3	7.6e-11
WP_000616433.1|2574992_2576468_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_000766132.1|2576648_2578139_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	30.6	6.4e-09
>prophage 195
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2592668	2600774	4639229	tRNA	Staphylococcus_phage(33.33%)	8	NA	NA
WP_000758422.1|2592668_2594354_-	long-chain-fatty-acid--CoA ligase FadD	NA	A0A2H4PQM9	Staphylococcus_phage	26.0	1.5e-35
WP_000290576.1|2594558_2595140_-	Slp family lipoprotein YeaY	NA	NA	NA	NA	NA
WP_001220966.1|2595179_2595875_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_000128841.1|2595932_2597843_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	31.7	6.5e-91
WP_001295493.1|2597974_2598319_+	RidA family protein	NA	NA	NA	NA	NA
WP_001307845.1|2598680_2599040_+	DUF1889 family protein	NA	NA	NA	NA	NA
WP_000457334.1|2599159_2599339_-	YoaH family protein	NA	NA	NA	NA	NA
WP_000854958.1|2599412_2600774_+	aminodeoxychorismate synthase component 1	NA	S4VT78	Pandoravirus	33.4	2.0e-41
>prophage 196
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2604636	2606193	4639229		Moraxella_phage(100.0%)	1	NA	NA
WP_000394983.1|2604636_2606193_-	CNNM family cation transport protein YoaE	NA	A0A0R6PEZ3	Moraxella_phage	45.4	1.7e-41
>prophage 197
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2611833	2612043	4639229		Morganella_phage(100.0%)	1	NA	NA
WP_001062678.1|2611833_2612043_-	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	78.1	1.6e-22
>prophage 198
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2617375	2619424	4639229		Moraxella_phage(100.0%)	1	NA	NA
WP_001055791.1|2617375_2619424_-	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	33.5	6.8e-86
>prophage 199
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2626920	2631390	4639229		Escherichia_phage(33.33%)	7	NA	NA
WP_000812724.1|2626920_2627577_-	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	50.2	3.1e-56
WP_000976476.1|2627972_2628314_-	YebY family protein	NA	NA	NA	NA	NA
WP_000879289.1|2628326_2629199_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA	NA
WP_000168747.1|2629202_2629577_-	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
WP_000916763.1|2629715_2629946_+	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	61.8	1.3e-14
WP_000011658.1|2630047_2630704_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_000944256.1|2630727_2631390_+	exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	41.6	2.0e-07
>prophage 200
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2639446	2640922	4639229		Cyanophage(100.0%)	1	NA	NA
WP_000301727.1|2639446_2640922_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	37.5	4.4e-79
>prophage 201
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2644920	2651984	4639229		Bacillus_virus(50.0%)	9	NA	NA
WP_001184045.1|2644920_2646243_-	murein DD-endopeptidase MepM	NA	A8ATH6	Listeria_phage	40.9	1.2e-14
WP_001300644.1|2646258_2647191_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA	NA
WP_000202996.1|2647269_2648025_+	zinc ABC transporter ATP-binding protein ZnuC	NA	G3M9Y6	Bacillus_virus	28.3	1.3e-18
WP_000571480.1|2648021_2648807_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
WP_000568519.1|2648953_2649964_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.5	5.6e-09
WP_000580323.1|2649972_2650584_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010723105.1|2650722_2650788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001024932.1|2650858_2651461_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_001295503.1|2651462_2651984_-	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	35.1	2.0e-10
>prophage 202
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2656002	2658053	4639229		Escherichia_coli_phage(50.0%)	3	NA	NA
WP_000639274.1|2656002_2656821_+	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	99.2	6.5e-72
WP_000252980.1|2656873_2657269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000019590.1|2657309_2658053_+	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.0	3.5e-24
>prophage 203
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2664669	2666403	4639229	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_001025322.1|2664669_2666403_+|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L6Z2	Tupanvirus	33.5	3.4e-86
>prophage 204
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2671655	2677299	4639229		uncultured_Caudovirales_phage(50.0%)	5	NA	NA
WP_000763867.1|2671655_2672045_-	chemotaxis protein CheY	NA	A0A2K9L4R0	Tupanvirus	32.0	1.3e-06
WP_000036361.1|2672059_2673109_-	protein-glutamate methylesterase/protein glutamine deamidase	NA	Q56AR1	Bacillus_thuringiensis_phage	32.8	7.9e-06
WP_000204337.1|2673111_2673972_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA	NA
WP_000483239.1|2673990_2675592_-	methyl-accepting chemotaxis protein IV	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.7	6.4e-15
WP_001297437.1|2675637_2677299_-	methyl-accepting chemotaxis protein II	NA	A0A2H4J162	uncultured_Caudovirales_phage	40.3	1.7e-10
>prophage 205
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2687386	2688901	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001187819.1|2687386_2688901_-	arabinose ABC transporter ATP binding protein AraG	NA	A0A2H4PQG7	Staphylococcus_phage	27.1	4.3e-13
>prophage 206
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2700893	2701646	4639229		Bacillus_virus(100.0%)	1	NA	NA
WP_001272991.1|2700893_2701646_-	L-cystine ABC transporter ATP-binding protein YecC	NA	G3M9Y6	Bacillus_virus	34.9	3.8e-26
>prophage 207
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2713652	2714321	4639229		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000334583.1|2713652_2714321_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.3	7.3e-82
>prophage 208
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2730154	2736911	4639229		Burkholderia_phage(50.0%)	7	NA	NA
WP_001350521.1|2730154_2731849_-	cellulose biosynthesis regulator YedQ	NA	A0A127AWB9	Bacillus_phage	35.6	1.3e-18
WP_000009307.1|2732019_2732202_-	DUF2158 domain-containing protein	NA	NA	NA	NA	NA
WP_000922686.1|2732280_2733198_-	DUF808 domain-containing protein	NA	NA	NA	NA	NA
WP_001212226.1|2733370_2734291_+	drug/metabolite exporter YedA	NA	NA	NA	NA	NA
WP_000786005.1|2734279_2734750_-	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	47.6	2.0e-33
WP_001157239.1|2734730_2736149_-	DNA-cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	54.8	3.0e-101
WP_000365562.1|2736215_2736911_-	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	28.0	2.8e-07
>prophage 209
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2741983	2742655	4639229		Bacillus_phage(100.0%)	1	NA	NA
WP_001395354.1|2741983_2742655_-	response regulator transcription factor HprR	NA	W8CYM9	Bacillus_phage	35.2	2.4e-32
>prophage 210
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2746199	2746730	4639229		Escherichia_phage(100.0%)	1	NA	NA
WP_001079074.1|2746199_2746730_+	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	100.0	1.9e-56
>prophage 211
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2770136	2774057	4639229	transposase	Escherichia_phage(50.0%)	2	NA	NA
WP_001310555.1|2770136_2771153_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.7	9.8e-187
WP_085947917.1|2772783_2774057_-|transposase	IS3-like element IS2 family transposase	transposase	Q9ZXG3	Shigella_phage	99.3	1.4e-177
>prophage 212
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2780648	2780870	4639229		Klebsiella_phage(100.0%)	1	NA	NA
WP_000692323.1|2780648_2780870_+	DUF987 domain-containing protein	NA	A0A142F0X9	Klebsiella_phage	45.8	1.4e-10
>prophage 213
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2785212	2786379	4639229		Stx2-converting_phage(100.0%)	1	NA	NA
WP_000830156.1|2785212_2786379_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	NA	B6DZZ7	Stx2-converting_phage	99.2	2.9e-227
>prophage 214
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2794023	2794923	4639229		Cellulophaga_phage(100.0%)	1	NA	NA
WP_000131782.1|2794023_2794923_+	ATP phosphoribosyltransferase	NA	A0A0F7Q4B0	Cellulophaga_phage	94.7	1.8e-11
>prophage 215
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2802278	2819728	4639229	transposase	Escherichia_phage(27.27%)	15	NA	NA
WP_000704857.1|2802278_2803445_-	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	52.2	1.0e-110
WP_000043484.1|2803693_2805100_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.3	1.4e-37
WP_010723085.1|2805726_2806743_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
WP_000520320.1|2807222_2808341_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_000601187.1|2808325_2808916_-	LPS biosynthesis protein	NA	A0A1V0SJ47	Klosneuvirus	32.6	2.6e-06
WP_001407542.1|2808896_2809889_-	beta-1,6-galactofuranosyltransferase	NA	NA	NA	NA	NA
WP_000639866.1|2809891_2811058_-	O16 family O-antigen polymerase	NA	NA	NA	NA	NA
WP_000272486.1|2811057_2812161_-	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	59.5	1.0e-133
WP_001393538.1|2812168_2813416_-	O16 family O-antigen flippase	NA	NA	NA	NA	NA
WP_001100981.1|2813412_2813970_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.5	7.8e-53
WP_000783975.1|2813969_2814851_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	63.8	1.9e-106
WP_001023610.1|2814908_2815808_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.2	1.5e-29
WP_000699460.1|2815807_2816893_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	5.2e-101
WP_000183060.1|2817265_2818159_-	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	42.0	1.0e-46
WP_001116026.1|2818333_2819728_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	31.9	4.9e-19
>prophage 216
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2825440	2832146	4639229		Bacillus_phage(25.0%)	6	NA	NA
WP_001350528.1|2825440_2826811_-	phosphomannomutase CpsG	NA	A0A127AWJ1	Bacillus_phage	27.7	1.7e-32
WP_000079274.1|2826915_2828352_-	mannose-1-phosphate guanyltransferase	NA	A0A1V0SH58	Hokovirus	29.2	9.7e-47
WP_000699693.1|2828354_2829578_-	colanic acid biosynthesis fucosyltransferase WcaI	NA	NA	NA	NA	NA
WP_001393539.1|2829574_2830054_-	GDP-mannose mannosyl hydrolase	NA	NA	NA	NA	NA
WP_000043654.1|2830056_2831022_-	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	51.1	1.3e-87
WP_000048190.1|2831024_2832146_-	GDP-mannose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	64.9	1.5e-132
>prophage 217
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2836389	2846780	4639229		uncultured_marine_virus(20.0%)	8	NA	NA
WP_000794699.1|2836389_2837229_-	colanic acid biosynthesis glycosyltransferase WcaA	NA	A0A0F7L2F7	uncultured_marine_virus	34.8	9.7e-07
WP_000137196.1|2837321_2839484_-	tyrosine-protein kinase Wzc	NA	A0A1X9I5D6	Streptococcus_phage	30.3	2.4e-17
WP_000482901.1|2839486_2839930_-	low molecular weight protein-tyrosine-phosphatase Wzb	NA	NA	NA	NA	NA
WP_000978094.1|2839935_2841075_-	polysaccharide export protein	NA	NA	NA	NA	NA
WP_000454701.1|2841733_2843317_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	42.6	7.2e-35
WP_001252331.1|2843590_2845444_-	outer membrane assembly protein AsmA	NA	NA	NA	NA	NA
WP_001234768.1|2845465_2846047_-	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	42.1	1.0e-31
WP_001295424.1|2846138_2846780_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	36.9	3.2e-34
>prophage 218
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2851505	2852858	4639229		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_000469708.1|2851505_2852858_+	molecular chaperone	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	20.6	2.7e-06
>prophage 219
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2866707	2875229	4639229	tRNA,transposase	Bacillus_phage(33.33%)	9	NA	NA
WP_000675150.1|2866707_2868111_+	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	29.0	3.0e-32
WP_000137877.1|2868107_2868830_+	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.6	3.7e-31
WP_001350529.1|2869020_2869353_+	YegP family protein	NA	NA	NA	NA	NA
WP_000476011.1|2869499_2870861_+|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	100.0	1.1e-217
WP_000468310.1|2871133_2871352_-	prophage transcriptional regulator OgrK	NA	Q6DW12	Phage_TP	100.0	4.7e-38
WP_001318299.1|2871820_2872138_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000807348.1|2872543_2873443_+	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.0	2.8e-12
WP_000903596.1|2873524_2873971_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_085947771.1|2874067_2875229_+|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
>prophage 220
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2883924	2887481	4639229		Serratia_phage(50.0%)	4	NA	NA
WP_000846217.1|2883924_2884929_+	ADP-ribosylglycohydrolase family protein	NA	A0A1S6UB21	Serratia_phage	29.4	7.5e-14
WP_000012001.1|2884925_2885891_+	kinase	NA	NA	NA	NA	NA
WP_000434038.1|2885864_2886611_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001351783.1|2886662_2887481_-	glycoside hydrolase family 25 protein	NA	D0R7H8	Paenibacillus_phage	38.0	1.9e-23
>prophage 221
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2898129	2900163	4639229	tRNA	Indivirus(100.0%)	1	NA	NA
WP_001350533.1|2898129_2900163_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.8e-54
>prophage 222
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2911796	2921237	4639229		Enterobacteria_phage(83.33%)	9	NA	NA
WP_001333512.1|2911796_2912933_+	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.7	1.9e-162
WP_001295429.1|2915054_2915516_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
WP_000950409.1|2915555_2916026_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	5.2e-82
WP_000598641.1|2916072_2916792_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001295431.1|2916788_2918474_-	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_001240401.1|2918695_2919427_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
WP_001216963.1|2919486_2919594_+	protein YohO	NA	NA	NA	NA	NA
WP_000783123.1|2919574_2920306_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_000569315.1|2920310_2921237_-	glycine betaine ABC transporter ATP binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	2.8e-23
>prophage 223
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2941598	2943119	4639229		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_000255039.1|2941598_2943119_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	NA	F2Y2R6	Organic_Lake_phycodnavirus	33.0	2.6e-10
>prophage 224
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2946813	2950599	4639229		Cellulophaga_phage(50.0%)	3	NA	NA
WP_001139613.1|2946813_2947482_-	GTP cyclohydrolase I FolE	NA	M1Q6X8	Cellulophaga_phage	56.3	9.0e-56
WP_000425438.1|2947739_2948576_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000489247.1|2948607_2950599_-	catecholate siderophore receptor CirA	NA	A0A0P0I887	Acinetobacter_phage	36.6	2.0e-13
>prophage 225
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2954669	2955527	4639229		Catovirus(100.0%)	1	NA	NA
WP_000873894.1|2954669_2955527_+	deoxyribonuclease IV	NA	A0A1V0SBL9	Catovirus	34.0	4.0e-24
>prophage 226
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2970074	2974375	4639229		Ostreococcus_tauri_virus(50.0%)	4	NA	NA
WP_001091940.1|2970074_2971541_+	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	29.4	2.3e-43
WP_000198828.1|2971658_2972645_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_000594599.1|2972683_2973397_+	Kdo(2)-lipid A phosphotransferase	NA	NA	NA	NA	NA
WP_000241011.1|2973808_2974375_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	NA	A0A1V0DZX6	Clostridioides_phage	40.7	4.2e-14
>prophage 227
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2980129	2987777	4639229		Vibrio_phage(50.0%)	7	NA	NA
WP_000194927.1|2980129_2981719_+	microcin C ABC transporter ATP-binding protein YejF	NA	G9BWD6	Planktothrix_phage	34.0	1.1e-19
WP_000202798.1|2981722_2982067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000213361.1|2982399_2983590_-	multidrug efflux MFS transporter Bcr	NA	S4TR35	Salmonella_phage	23.7	2.2e-20
WP_001234850.1|2983617_2984313_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA	NA
WP_000578061.1|2984461_2986222_+	DEAD/DEAH box helicase	NA	M4Q3N1	Vibrio_phage	41.8	2.4e-100
WP_000494183.1|2986346_2986631_+	50S ribosomal protein L25	NA	NA	NA	NA	NA
WP_000050793.1|2986769_2987777_-	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	48.6	4.1e-84
>prophage 228
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	2992894	2993911	4639229	transposase	Escherichia_phage(100.0%)	1	NA	NA
WP_010723085.1|2992894_2993911_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
>prophage 229
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3000850	3001468	4639229		Bacillus_virus(100.0%)	1	NA	NA
WP_000888560.1|3000850_3001468_-	cytochrome c biogenesis heme-transporting ATPase CcmA	NA	G3M9Y6	Bacillus_virus	25.5	1.9e-12
>prophage 230
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3010801	3016579	4639229		Bacillus_phage(25.0%)	5	NA	NA
WP_000422182.1|3010801_3012445_-	microcin J25 efflux ABC transporter YojI	NA	W8CYL7	Bacillus_phage	24.0	1.2e-13
WP_000884971.1|3012520_3013171_-	DNA oxidative demethylase AlkB	NA	A0A2K9L3R7	Tupanvirus	33.0	8.3e-06
WP_000710375.1|3013170_3014235_-	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	50.5	1.8e-18
WP_000406064.1|3014308_3015364_-	FAD:protein FMN transferase ApbE	NA	NA	NA	NA	NA
WP_000865568.1|3015475_3016579_-	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	59.3	5.2e-117
>prophage 231
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3020856	3025699	4639229		Hokovirus(50.0%)	2	NA	NA
WP_000876011.1|3020856_3023706_-	two-component system sensor histidine kinase RcsC	NA	A0A1V0SGX0	Hokovirus	27.2	1.4e-41
WP_000559125.1|3023872_3025699_+	two-component system sensor histidine kinase AtoS	NA	W8CYF6	Bacillus_phage	27.3	1.5e-20
>prophage 232
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3040622	3043250	4639229		Bacillus_virus(100.0%)	1	NA	NA
WP_001281242.1|3040622_3043250_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	NA	G3M9Z5	Bacillus_virus	30.4	8.1e-92
>prophage 233
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3048694	3054841	4639229		Pseudomonas_phage(50.0%)	5	NA	NA
WP_001075164.1|3048694_3050980_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2D1GNB1	Pseudoalteromonas_phage	63.6	2.5e-283
WP_000332037.1|3051213_3052344_+	ribonucleotide-diphosphate reductase subunit beta	NA	G9IAA3	Pseudomonas_phage	79.1	1.5e-175
WP_000135040.1|3052343_3052598_+	ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE	NA	G9IAA2	Pseudomonas_phage	73.1	2.6e-24
WP_000301050.1|3052651_3053302_-	lipopolysaccharide kinase InaA	NA	NA	NA	NA	NA
WP_000779105.1|3053764_3054841_-	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	46.0	3.0e-08
>prophage 234
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3060733	3065244	4639229	transposase	Sodalis_phage(50.0%)	5	NA	NA
WP_000140592.1|3060733_3061633_+|transposase	ISNCY family transposase	transposase	Q2A0A7	Sodalis_phage	54.0	2.4e-67
WP_000150333.1|3061645_3061831_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000992954.1|3061871_3062675_-	2-keto-3-deoxy-L-rhamnonate aldolase	NA	NA	NA	NA	NA
WP_000100890.1|3062692_3063982_-	MFS transporter	NA	NA	NA	NA	NA
WP_001319848.1|3064038_3065244_-	L-rhamnonate dehydratase	NA	Q6A202	Oenococcus_phage	28.3	1.2e-26
>prophage 235
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3068847	3073851	4639229		Tupanvirus(50.0%)	4	NA	NA
WP_000879112.1|3068847_3069450_-	histidine phosphatase family protein	NA	A0A2L1IV13	Escherichia_phage	42.9	4.4e-09
WP_001295286.1|3069757_3070897_+	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	NA	A0A2K9L470	Tupanvirus	29.8	1.5e-29
WP_000461657.1|3070900_3071869_+	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	NA	F1C5B0	Cronobacter_phage	31.5	8.8e-36
WP_000860273.1|3071868_3073851_+	bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	NA	A0A2K9KZK0	Tupanvirus	25.8	1.8e-19
>prophage 236
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3112691	3115919	4639229		Salmonella_phage(50.0%)	3	NA	NA
WP_000813859.1|3112691_3113291_+	5'-deoxynucleotidase	NA	A0A2L0V156	Salmonella_phage	38.6	7.0e-07
WP_001012899.1|3113349_3115182_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_001203392.1|3115268_3115919_-	hexitol phosphatase HpxA	NA	M1IMD4	Acanthocystis_turfacea_Chlorella_virus	35.4	3.1e-08
>prophage 237
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3126478	3128339	4639229		Sodalis_phage(50.0%)	2	NA	NA
WP_000156149.1|3126478_3127369_-	recombination-promoting nuclease RpnB	NA	Q2A0A7	Sodalis_phage	43.9	8.9e-67
WP_001293613.1|3127565_3128339_-	histidine ABC transporter ATP-binding protein HisP	NA	M1I0T9	Acanthocystis_turfacea_Chlorella_virus	28.2	2.1e-08
>prophage 238
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3132550	3134068	4639229		Mollivirus(100.0%)	1	NA	NA
WP_000334220.1|3132550_3134068_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	44.0	5.9e-87
>prophage 239
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3140544	3141681	4639229		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000699148.1|3140544_3141681_-	4-phosphoerythronate dehydrogenase PdxB	NA	A0A2R8FDS8	Brazilian_cedratvirus	28.5	6.5e-22
>prophage 240
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3150217	3151303	4639229		Pandoravirus(100.0%)	1	NA	NA
WP_001333535.1|3150217_3151303_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	47.8	9.1e-90
>prophage 241
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3169130	3180340	4639229	integrase,tail	Enterobacteria_phage(50.0%)	17	3167105:3167121	3184015:3184031
3167105:3167121	attL	TATTGGTATCGACAACC	NA	NA	NA	NA
WP_000368140.1|3169130_3170063_+	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	99.0	2.5e-165
WP_000958671.1|3170374_3171532_+|integrase	prophage integrase IntS	integrase	A5VW56	Enterobacteria_phage	100.0	5.7e-223
WP_000915541.1|3171684_3172047_+	GtrA family protein	NA	U5P0S6	Shigella_phage	88.3	1.0e-53
WP_000703651.1|3172043_3172964_+	glycosyltransferase family 2 protein	NA	M1FQW5	Enterobacteria_phage	89.9	4.2e-160
WP_001030215.1|3172960_3174292_+	hypothetical protein	NA	U5P0I5	Shigella_phage	36.7	6.8e-63
WP_047792215.1|3174326_3174608_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001106835.1|3174906_3175347_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	70.1	9.5e-54
WP_011443597.1|3175373_3175892_-	hypothetical protein	NA	M1FN94	Enterobacteria_phage	68.8	4.6e-39
WP_000066913.1|3175941_3176217_-	phage N-6-adenine-methyltransferase	NA	Q8SBE9	Shigella_phage	100.0	2.6e-49
WP_001393497.1|3176216_3176711_-	PerC family transcriptional regulator	NA	A0A0P0ZCF0	Stx2-converting_phage	98.1	1.2e-86
WP_000128175.1|3176707_3177076_-	hypothetical protein	NA	U5P0A0	Shigella_phage	99.2	1.3e-69
WP_000135673.1|3177433_3177796_+	hypothetical protein	NA	Q8SBF8	Shigella_phage	99.2	1.9e-60
WP_000081278.1|3177861_3178686_+	YfdQ family protein	NA	K7PJQ6	Enterobacteria_phage	99.3	7.8e-150
WP_000008183.1|3178813_3179350_+	5'-deoxynucleotidase	NA	K7PKJ9	Enterobacteria_phage	98.9	3.7e-100
WP_001242717.1|3179340_3179703_+	phage protein	NA	K7PH61	Enterobacteria_phage	99.1	2.0e-65
WP_000206809.1|3179702_3180008_+	hypothetical protein	NA	U5P0J0	Shigella_phage	96.0	2.2e-49
WP_001163428.1|3180139_3180340_+	response regulator inhibitor TorI	NA	K7P7V0	Enterobacteria_phage	100.0	2.4e-33
3184015:3184031	attR	TATTGGTATCGACAACC	NA	NA	NA	NA
>prophage 242
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3188203	3195780	4639229		Bacillus_phage(50.0%)	4	NA	NA
WP_001326970.1|3188203_3191797_+	acid-sensing system histidine kinase EvgS	NA	W8CYM9	Bacillus_phage	40.0	1.1e-09
WP_001296867.1|3191852_3192998_-	CoA:oxalate CoA-transferase	NA	NA	NA	NA	NA
WP_000955028.1|3193071_3194016_-	transporter YfdV	NA	NA	NA	NA	NA
WP_001283490.1|3194085_3195780_-	oxalyl-CoA decarboxylase	NA	E5ERI2	Ostreococcus_lucimarinus_virus	23.6	1.4e-23
>prophage 243
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3199474	3200395	4639229		Morganella_phage(100.0%)	1	NA	NA
WP_000484404.1|3199474_3200395_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	54.8	4.9e-76
>prophage 244
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3204212	3204947	4639229		Clostridioides_phage(100.0%)	1	NA	NA
WP_001295458.1|3204212_3204947_+	response regulator transcription factor	NA	A0A2R2ZGH8	Clostridioides_phage	25.4	3.6e-13
>prophage 245
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3231870	3244524	4639229		Streptococcus_phage(40.0%)	12	NA	NA
WP_000443661.1|3231870_3233886_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	43.5	1.7e-150
WP_001300494.1|3233956_3234943_-	cell division protein ZipA	NA	NA	NA	NA	NA
WP_000254839.1|3235172_3235934_+	sulfate transporter CysZ	NA	NA	NA	NA	NA
WP_000034402.1|3236118_3237090_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	51.0	2.8e-74
WP_000487600.1|3237473_3237731_+	phosphocarrier protein Hpr	NA	NA	NA	NA	NA
WP_000623140.1|3237775_3239503_+	phosphoenolpyruvate-protein phosphotransferase PtsI	NA	A0A1V0SGR7	Hokovirus	31.1	1.3e-16
WP_000522247.1|3239543_3240053_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000096674.1|3240095_3240947_-	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_000719962.1|3241051_3241426_+	YfeK family protein	NA	NA	NA	NA	NA
WP_000745534.1|3241458_3242193_+	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_001336044.1|3242381_3243293_-	cysteine synthase B	NA	A0A1X9I5F1	Streptococcus_phage	41.3	3.8e-57
WP_000021036.1|3243426_3244524_-	sulfate/thiosulfate ABC transporter ATP-binding protein CysA	NA	G3M9Y6	Bacillus_virus	34.1	4.2e-26
>prophage 246
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3247541	3248333	4639229		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_000517431.1|3247541_3248333_-	SDR family oxidoreductase UcpA	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.0	8.9e-18
>prophage 247
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3251811	3256931	4639229		Mycobacterium_phage(33.33%)	6	NA	NA
WP_001327042.1|3251811_3253116_+	penicillin binding protein PBP4B	NA	A0A0B5A438	Mycobacterium_phage	26.2	1.6e-08
WP_001350538.1|3253355_3254255_-	porphyrinogen peroxidase	NA	S4VVJ7	Pandoravirus	33.1	1.6e-26
WP_000838944.1|3254350_3254926_-	RpoE-regulated lipoprotein	NA	NA	NA	NA	NA
WP_001350539.1|3254986_3255436_-	DUF2919 domain-containing protein	NA	NA	NA	NA	NA
WP_000405996.1|3255422_3255848_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
WP_000102886.1|3256061_3256931_+	N-acetylmuramoyl-L-alanine amidase AmiA	NA	E5DV68	Deep-sea_thermophilic_phage	27.4	4.2e-13
>prophage 248
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3262567	3263776	4639229	integrase	Enterobacteria_phage(100.0%)	1	3256696:3256709	3266475:3266488
3256696:3256709	attL	TTAAGCCGGTGCAT	NA	NA	NA	NA
WP_000047773.1|3262567_3263776_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q7M297	Enterobacteria_phage	39.1	1.9e-75
WP_000047773.1|3262567_3263776_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q7M297	Enterobacteria_phage	39.1	1.9e-75
3266475:3266488	attR	TTAAGCCGGTGCAT	NA	NA	NA	NA
>prophage 249
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3282375	3283326	4639229		Cyanophage(100.0%)	1	NA	NA
WP_001003709.1|3282375_3283326_+	transaldolase	NA	A0A127KNC6	Cyanophage	31.3	5.7e-11
>prophage 250
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3300614	3301328	4639229		Synechococcus_phage(100.0%)	1	NA	NA
WP_001295467.1|3300614_3301328_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3FGF0	Synechococcus_phage	36.1	6.9e-38
>prophage 251
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3322580	3326582	4639229		Enterobacteria_phage(33.33%)	4	NA	NA
WP_000198328.1|3322580_3323870_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	37.4	5.1e-63
WP_001295473.1|3323955_3324582_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001336050.1|3324906_3325944_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.3	1.4e-71
WP_001028612.1|3325943_3326582_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	42.9	1.8e-29
>prophage 252
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3333017	3339312	4639229		Escherichia_phage(60.0%)	6	NA	NA
WP_001344399.1|3333017_3333191_+	DUF2633 family protein	NA	G9L6F2	Escherichia_phage	100.0	6.8e-24
WP_000669402.1|3333504_3334020_+	glycine zipper 2TM domain-containing protein	NA	G9L6F1	Escherichia_phage	100.0	1.0e-62
WP_000755173.1|3334035_3334575_+	DUF5384 family protein	NA	G9L6F0	Escherichia_phage	100.0	3.4e-45
WP_000138270.1|3334667_3336245_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
WP_001299507.1|3336313_3337780_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	39.1	2.3e-88
WP_000937912.1|3337941_3339312_+	exodeoxyribonuclease VII large subunit	NA	A0A2H4UVM9	Bodo_saltans_virus	35.3	2.4e-42
>prophage 253
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3348142	3348574	4639229		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000963837.1|3348142_3348574_-	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	37.9	3.7e-18
>prophage 254
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3358784	3365241	4639229		Mycoplasma_phage(20.0%)	8	NA	NA
WP_000133592.1|3358784_3360068_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	37.8	3.8e-34
WP_000523616.1|3360245_3360446_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_001124469.1|3360457_3360793_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_001196613.1|3360794_3362645_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.6	5.5e-103
WP_000384413.1|3362661_3363177_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_000028953.1|3363272_3363596_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	48.6	5.4e-22
WP_000331707.1|3363612_3363999_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.9	1.4e-53
WP_001295373.1|3364026_3365241_-	cysteine desulfurase	NA	A0A1X7C038	Faustovirus	31.8	8.8e-33
>prophage 255
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3380559	3382071	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000493470.1|3380559_3382071_-	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.3	3.3e-13
>prophage 256
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3387963	3399253	4639229		Bacillus_phage(50.0%)	7	NA	NA
WP_000919159.1|3387963_3389217_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.7	7.8e-101
WP_000883122.1|3389544_3390735_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_000717694.1|3390779_3391118_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
WP_001295369.1|3391178_3392513_-	two-component system response regulator GlrR	NA	W8CYM9	Bacillus_phage	37.3	3.9e-10
WP_001215861.1|3392502_3393216_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA	NA
WP_001311037.1|3393380_3394808_-	two component system sensor histidine kinase QseE/GlrK	NA	W8CYF6	Bacillus_phage	24.9	3.0e-16
WP_000970102.1|3395365_3399253_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	58.9	1.3e-130
>prophage 257
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3403372	3403633	4639229		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_001196283.1|3403372_3403633_+	4Fe-4S dicluster ferredoxin YfhL	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	52.3	1.1e-17
>prophage 258
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3407092	3410834	4639229		Tetraselmis_virus(50.0%)	3	NA	NA
WP_001068343.1|3407092_3407773_-	ribonuclease III	NA	A0A2P0VNZ5	Tetraselmis_virus	39.6	5.6e-21
WP_000002541.1|3408044_3409019_-	signal peptidase I	NA	NA	NA	NA	NA
WP_000790168.1|3409034_3410834_-	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	41.9	4.2e-23
>prophage 259
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3416605	3422864	4639229	tRNA	Cafeteria_roenbergensis_virus(25.0%)	7	NA	NA
WP_000219203.1|3416605_3417940_+	ATP-dependent RNA helicase SrmB	NA	E3T5E1	Cafeteria_roenbergensis_virus	30.8	2.9e-45
WP_001300638.1|3418148_3419030_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000189207.1|3419132_3419720_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627807.1|3419775_3420159_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	72.0	1.4e-32
WP_001262716.1|3420463_3421153_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	48.8	7.1e-56
WP_000997403.1|3421200_3422238_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098726.1|3422444_3422864_+	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	38.5	2.8e-15
>prophage 260
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3428157	3429456	4639229		Burkholderia_virus(100.0%)	1	NA	NA
WP_000841103.1|3428157_3429456_-	alpha-ketoglutarate permease	NA	Q6JIH2	Burkholderia_virus	32.2	1.3e-45
>prophage 261
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3435309	3437883	4639229		Enterobacteria_phage(100.0%)	1	NA	NA
WP_001235102.1|3435309_3437883_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.3	2.6e-127
>prophage 262
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3443789	3444860	4639229		Escherichia_coli_O157_typing_phage(100.0%)	1	NA	NA
WP_001168037.1|3443789_3444860_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.2	4.0e-90
>prophage 263
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3458605	3461110	4639229	integrase	Staphylococcus_phage(50.0%)	2	3454339:3454351	3461824:3461836
3454339:3454351	attL	GCCTCAATCTCTT	NA	NA	NA	NA
WP_000162574.1|3458605_3459088_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	46.8	4.0e-29
WP_000101723.1|3459868_3461110_+|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	48.0	4.8e-103
3461824:3461836	attR	AAGAGATTGAGGC	NA	NA	NA	NA
>prophage 264
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3472374	3475864	4639229		Yersinia_phage(50.0%)	6	NA	NA
WP_000197391.1|3472374_3473196_+	DUF945 domain-containing protein	NA	A0A2C9CX26	Yersinia_phage	38.7	1.4e-45
WP_000189409.1|3473412_3474114_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_001144029.1|3474154_3474391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000824222.1|3474390_3474834_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000702495.1|3474857_3475325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000065803.1|3475549_3475864_-	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	64.7	3.8e-12
>prophage 265
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3479628	3480087	4639229		Bordetella_phage(100.0%)	1	NA	NA
WP_000211841.1|3479628_3480087_+	antirestriction protein	NA	A0A2D0W9W4	Bordetella_phage	34.1	5.0e-13
>prophage 266
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3486774	3486993	4639229		Salmonella_phage(100.0%)	1	NA	NA
WP_071524906.1|3486774_3486993_-	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	70.0	4.1e-10
>prophage 267
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3496444	3500496	4639229		Klosneuvirus(50.0%)	4	NA	NA
WP_001087611.1|3496444_3497725_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	30.1	1.9e-33
WP_001295173.1|3497962_3499363_+	GABA permease	NA	NA	NA	NA	NA
WP_000156811.1|3499383_3500046_+	DNA-binding transcriptional regulator CsiR	NA	NA	NA	NA	NA
WP_000522415.1|3500046_3500496_-	potassium binding protein Kbp	NA	A0A090DBR9	Clostridium_phage	39.5	2.0e-06
>prophage 268
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3504432	3509727	4639229		Oenococcus_phage(20.0%)	5	NA	NA
WP_001223227.1|3504432_3504678_+	glutaredoxin-like protein NrdH	NA	Q5K5J3	Oenococcus_phage	35.3	1.8e-06
WP_000080947.1|3504674_3505085_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	44.4	4.6e-18
WP_000246534.1|3505057_3507202_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	48.5	1.7e-196
WP_000777969.1|3507211_3508171_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	71.8	3.5e-133
WP_000985494.1|3508524_3509727_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	NA	G3M9Y6	Bacillus_virus	39.4	4.9e-28
>prophage 269
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3522670	3528056	4639229	tRNA	Vibrio_phage(25.0%)	5	NA	NA
WP_000906486.1|3522670_3522856_-	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	66.7	4.9e-12
WP_000047184.1|3523090_3525721_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L1X7	Tupanvirus	38.6	5.5e-80
WP_000140508.1|3525848_3526349_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_000963143.1|3526417_3527479_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	63.4	1.2e-113
WP_000132231.1|3527558_3528056_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	49.7	4.4e-31
>prophage 270
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3533522	3534488	4639229		Tetraselmis_virus(100.0%)	1	NA	NA
WP_001287420.1|3533522_3534488_+	arabinose-5-phosphate isomerase GutQ	NA	A0A2P0VNK5	Tetraselmis_virus	33.9	2.3e-36
>prophage 271
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3541963	3542977	4639229		Enterobacteria_phage(100.0%)	1	NA	NA
WP_001300815.1|3541963_3542977_-	DNA-binding transcriptional regulator AscG	NA	C6ZCU4	Enterobacteria_phage	28.4	9.3e-28
>prophage 272
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3560802	3573984	4639229		Escherichia_phage(50.0%)	12	NA	NA
WP_001272928.1|3560802_3563364_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
WP_001141337.1|3563469_3564126_+	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	46.3	4.7e-49
WP_001300386.1|3564176_3564944_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.3	7.4e-70
WP_000848004.1|3565139_3566048_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	4.3e-117
WP_001393459.1|3566044_3567211_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	60.6	1.1e-120
WP_001278994.1|3567302_3567941_+	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_001136934.1|3567945_3568722_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_000104441.1|3568810_3570175_+	GntP family transporter	NA	NA	NA	NA	NA
WP_000081588.1|3570268_3571261_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_001272592.1|3571323_3572463_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
WP_000254708.1|3572602_3573229_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
WP_001295182.1|3573222_3573984_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
>prophage 273
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3577096	3579129	4639229		Tupanvirus(50.0%)	2	NA	NA
WP_001173673.1|3577096_3577702_-	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	38.1	4.2e-28
WP_001090361.1|3577701_3579129_-	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	31.4	9.7e-31
>prophage 274
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3603197	3603983	4639229		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_000021334.1|3603197_3603983_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.7	4.2e-20
>prophage 275
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3608456	3613376	4639229		Vibrio_phage(33.33%)	5	NA	NA
WP_001199973.1|3608456_3609128_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A2I7S8X1	Vibrio_phage	25.0	1.7e-14
WP_001288228.1|3609266_3609407_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001268460.1|3609420_3610293_+	YgcG family protein	NA	NA	NA	NA	NA
WP_000036723.1|3610352_3611651_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	58.8	2.0e-131
WP_000210878.1|3611738_3613376_-	CTP synthase (glutamine hydrolyzing)	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.4	1.8e-153
>prophage 276
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3617408	3621523	4639229		Erysipelothrix_phage(50.0%)	2	NA	NA
WP_000046812.1|3617408_3618710_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	27.9	5.2e-39
WP_000186450.1|3618766_3621523_+	two-component sensor histidine kinase BarA	NA	A0A1V0SGX0	Hokovirus	30.6	6.4e-55
>prophage 277
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3629057	3629906	4639229		Vibrio_phage(100.0%)	1	NA	NA
WP_000100421.1|3629057_3629906_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.1	1.0e-40
>prophage 278
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3634764	3635520	4639229		Bacillus_phage(100.0%)	1	NA	NA
WP_000268232.1|3634764_3635520_+	flap endonuclease Xni	NA	F8WQ40	Bacillus_phage	33.5	5.0e-10
>prophage 279
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3647046	3662594	4639229	tRNA	Bacillus_phage(33.33%)	9	NA	NA
WP_001300698.1|3647046_3648252_+	cysteine desulfurase CsdA	NA	Q2XUY6	environmental_halophage	36.8	3.0e-73
WP_000184261.1|3648251_3648695_+	cysteine desulfurase sulfur acceptor subunit CsdE	NA	NA	NA	NA	NA
WP_000117728.1|3648745_3649552_-|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	33.3	2.2e-16
WP_000678646.1|3649790_3650888_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_000016907.1|3651466_3652720_-	N-acetylmuramoyl-L-alanine amidase AmiC	NA	Q5YA51	Bacillus_phage	28.6	2.2e-15
WP_000237947.1|3652951_3654283_+	amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
WP_000775955.1|3654344_3656171_-	exodeoxyribonuclease V subunit alpha	NA	A0A1P8DII4	Virus_Rctr197k	26.7	3.5e-25
WP_001285993.1|3656170_3659713_-	exodeoxyribonuclease V subunit beta	NA	A7KV33	Bacillus_phage	20.9	1.5e-08
WP_001138201.1|3659705_3662594_-	pitrilysin	NA	A0A1V0SJA4	Klosneuvirus	25.7	5.3e-68
>prophage 280
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3668070	3674843	4639229		Geobacillus_virus(33.33%)	6	NA	NA
WP_000816232.1|3668070_3668865_-	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	70.8	7.6e-118
WP_000204658.1|3668871_3669747_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_000957910.1|3669897_3672144_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	26.2	2.7e-11
WP_000564489.1|3672156_3672687_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000082201.1|3673371_3674061_+	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA	NA
WP_000895624.1|3674129_3674843_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	47.3	2.6e-45
>prophage 281
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3684473	3686968	4639229		Aichi_virus(50.0%)	2	NA	NA
WP_000256438.1|3684473_3685892_-	arabinose-proton symporter AraE	NA	O13311	Aichi_virus	26.9	1.8e-24
WP_000603502.1|3686206_3686968_-	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.7	7.7e-19
>prophage 282
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3700081	3703601	4639229	transposase	Shigella_phage(50.0%)	2	NA	NA
WP_085947917.1|3700081_3701355_-|transposase	IS3-like element IS2 family transposase	transposase	Q9ZXG3	Shigella_phage	99.3	1.4e-177
WP_001301085.1|3702845_3703601_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I2E8W3	Clostridium_phage	36.8	1.1e-12
>prophage 283
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3728060	3743453	4639229	tRNA	environmental_Halophage(14.29%)	14	NA	NA
WP_001280192.1|3728060_3729461_+	xanthine/proton symporter XanQ	NA	H9YQ34	environmental_Halophage	46.1	1.7e-19
WP_001336279.1|3729478_3730795_+	guanine deaminase	NA	NA	NA	NA	NA
WP_000012163.1|3730830_3732198_+	guanine/hypoxanthine transporter GhxQ	NA	A0A0R6PHV4	Moraxella_phage	73.1	2.1e-160
WP_000838428.1|3732233_3732722_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_001350545.1|3732721_3734641_-	formate-dependent uric acid utilization protein YgfT	NA	NA	NA	NA	NA
WP_001295374.1|3735076_3736525_+	purine permease	NA	Q9KX94	Enterobacteria_phage	26.8	7.3e-26
WP_001010156.1|3736526_3736652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_120795390.1|3736648_3736720_-	protein YqfH	NA	NA	NA	NA	NA
WP_001192820.1|3736774_3737323_+	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_000003071.1|3737366_3738884_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.7	5.9e-87
WP_010723217.1|3738893_3739992_-	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.0	1.8e-05
WP_000813200.1|3740082_3741816_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.7	1.9e-60
WP_000715214.1|3741821_3742532_-	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA	NA
WP_000806638.1|3742556_3743453_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	28.6	6.7e-30
>prophage 284
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3747377	3752751	4639229		Pandoravirus(50.0%)	3	NA	NA
WP_001336277.1|3747377_3748811_+	6-phospho-beta-glucosidase BglA	NA	A0A0B5JD41	Pandoravirus	26.3	2.0e-31
WP_000951964.1|3748867_3749611_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_000195062.1|3749877_3752751_-	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	52.1	2.2e-263
>prophage 285
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3760887	3762120	4639229		Catovirus(100.0%)	1	NA	NA
WP_001151604.1|3760887_3762120_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	48.4	1.9e-104
>prophage 286
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3790415	3791570	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001062128.1|3790415_3791570_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	63.2	4.0e-128
>prophage 287
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3833887	3834904	4639229	transposase	Escherichia_phage(100.0%)	1	NA	NA
WP_010723085.1|3833887_3834904_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
>prophage 288
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3853371	3854256	4639229		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000018760.1|3853371_3854256_+	NADP(+)-dependent aldehyde reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	47.1	1.7e-65
>prophage 289
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3860332	3869683	4639229		Staphylococcus_phage(33.33%)	7	NA	NA
WP_000013149.1|3860332_3861160_+	2,5-didehydrogluconate reductase DkgA	NA	A0A2H4PQR8	Staphylococcus_phage	45.2	7.2e-63
WP_000691619.1|3861359_3862286_+	YbjP/YqhG family protein	NA	NA	NA	NA	NA
WP_000848528.1|3862336_3862594_+	lipoprotein YqhH	NA	NA	NA	NA	NA
WP_000095187.1|3862636_3864856_-	YgiQ family radical SAM protein	NA	M1QSD9	Pseudomonas_phage	70.4	7.8e-104
WP_000059388.1|3864966_3866379_-	cell division protein FtsP	NA	NA	NA	NA	NA
WP_000965722.1|3866453_3867191_-	1-acylglycerol-3-phosphate O-acyltransferase	NA	NA	NA	NA	NA
WP_001281881.1|3867424_3869683_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	35.1	1.4e-84
>prophage 290
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3872993	3873386	4639229		Stx_converting_phage(100.0%)	1	NA	NA
WP_000712658.1|3872993_3873386_-	OB fold stress tolerance protein YgiW	NA	A0A1I9LJU6	Stx_converting_phage	49.1	9.4e-21
>prophage 291
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3877213	3891124	4639229	transposase	Bacillus_virus(16.67%)	15	NA	NA
WP_000195296.1|3877213_3879106_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	35.1	3.4e-92
WP_000105733.1|3879134_3879716_-	esterase YqiA	NA	NA	NA	NA	NA
WP_000444747.1|3879715_3880543_-	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA	NA
WP_000833393.1|3880567_3880990_-	DUF1249 family protein	NA	NA	NA	NA	NA
WP_000917117.1|3880990_3881620_-	ADP-ribose diphosphatase	NA	A0A1S6L1P8	Vibrio_phage	32.5	9.2e-18
WP_000735278.1|3881824_3883306_+	outer membrane channel protein TolC	NA	NA	NA	NA	NA
WP_000831543.1|3883453_3884125_+	DUF1190 family protein	NA	A0A173GEW8	Erwinia_phage	44.3	4.8e-33
WP_000442860.1|3884130_3885291_+	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	43.1	3.5e-87
WP_000188362.1|3885328_3886144_-	4,5-DOPA dioxygenase extradiol	NA	NA	NA	NA	NA
WP_001295627.1|3886259_3887033_+	zinc transporter ZupT	NA	NA	NA	NA	NA
WP_000469266.1|3887090_3887261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001076997.1|3887522_3888176_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	44.3	4.9e-46
WP_001295626.1|3888549_3888840_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_001272145.1|3889123_3889675_+	fimbrial-like protein	NA	NA	NA	NA	NA
WP_085947917.1|3889851_3891124_+|transposase	IS3-like element IS2 family transposase	transposase	Q9ZXG3	Shigella_phage	99.3	1.4e-177
>prophage 292
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3899029	3900463	4639229		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000869178.1|3899029_3900463_-	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	29.4	3.0e-40
>prophage 293
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3905600	3906839	4639229	tRNA	Sinorhizobium_phage(100.0%)	1	NA	NA
WP_000708487.1|3905600_3906839_+|tRNA	fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca	tRNA	A0A0F6YPT7	Sinorhizobium_phage	51.9	3.5e-93
>prophage 294
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3913239	3929435	4639229	tRNA	Moraxella_phage(16.67%)	12	NA	NA
WP_001264352.1|3913239_3914253_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	59.2	6.3e-109
WP_001144069.1|3914490_3914706_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_000918827.1|3914816_3916562_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.4	1.1e-76
WP_000437376.1|3916756_3918598_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	1.1e-34
WP_000228937.1|3918676_3919183_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
WP_001066494.1|3919436_3920201_-	NADPH-dependent ferric chelate reductase	NA	NA	NA	NA	NA
WP_000018003.1|3920488_3921112_+	DNA-binding transcriptional regulator NfeR	NA	NA	NA	NA	NA
WP_000094721.1|3921265_3922786_-	aerotaxis sensor receptor Aer	NA	A0A1B0V854	Salmonella_phage	51.5	3.1e-35
WP_000627220.1|3923092_3924583_+	putrescine aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	28.6	2.2e-33
WP_000450594.1|3924624_3924957_-|tRNA	tRNA-binding protein	tRNA	NA	NA	NA	NA
WP_000212475.1|3925175_3926159_+	transcriptional regulator EbgR	NA	NA	NA	NA	NA
WP_001082856.1|3926342_3929435_+	beta-galactosidase subunit alpha	NA	L0N6M2	Herpes_simplex_virus	34.0	2.5e-156
>prophage 295
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3942289	3943255	4639229		Escherichia_phage(100.0%)	1	NA	NA
WP_001098806.1|3942289_3943255_+	TerC family membrane protein Alx	NA	A0A291LBC5	Escherichia_phage	33.8	5.2e-36
>prophage 296
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3963833	3966128	4639229		Tetraselmis_virus(100.0%)	1	NA	NA
WP_000861734.1|3963833_3966128_-	2-ketobutyrate formate-lyase/pyruvate formate-lyase	NA	A0A2P0VNR5	Tetraselmis_virus	41.0	7.4e-158
>prophage 297
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3974334	3975480	4639229		Streptococcus_phage(100.0%)	1	NA	NA
WP_001300387.1|3974334_3975480_-	glycerate 2-kinase	NA	W6LM47	Streptococcus_phage	41.3	1.7e-49
>prophage 298
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	3996184	4003978	4639229		Streptococcus_phage(25.0%)	10	NA	NA
WP_000809262.1|3996184_3997045_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	43.6	9.5e-50
WP_000249104.1|3997109_3999146_+	penicillin-binding protein activator LpoA	NA	NA	NA	NA	NA
WP_000246830.1|3999103_3999499_+	YraN family protein	NA	NA	NA	NA	NA
WP_001158034.1|3999518_4000109_+	DnaA initiator-associating protein DiaA	NA	A0A067XQR2	Caulobacter_phage	31.1	5.4e-12
WP_000646033.1|4000118_4000694_+	divisome-associated lipoprotein YraP	NA	NA	NA	NA	NA
WP_000147574.1|4000807_4001848_-	permease	NA	NA	NA	NA	NA
WP_001300423.1|4001920_4002556_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_000037608.1|4002683_4003202_+	protein/nucleic acid deglycase	NA	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	27.0	4.4e-10
WP_000449030.1|4003181_4003625_-	YhbP family protein	NA	NA	NA	NA	NA
WP_000189333.1|4003675_4003978_+	DNA damage response exodeoxyribonuclease YhbQ	NA	F2NZ06	Diadromus_pulchellus_ascovirus	53.8	7.8e-15
>prophage 299
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4009680	4011570	4639229		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_001295553.1|4009680_4011570_-	DEAD/DEAH family ATP-dependent RNA helicase	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	30.8	2.0e-52
>prophage 300
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4017051	4023690	4639229		Cafeteria_roenbergensis_virus(50.0%)	4	NA	NA
WP_000133044.1|4017051_4019724_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	26.3	2.5e-24
WP_001031057.1|4019748_4021236_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_001300397.1|4021263_4021716_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_000207680.1|4022346_4023690_+	argininosuccinate synthase	NA	A0A140XAJ5	Dickeya_phage	92.9	1.1e-63
>prophage 301
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4027772	4030645	4639229	protease	Pandoravirus(50.0%)	2	NA	NA
WP_000764731.1|4027772_4028621_-	dihydropteroate synthase	NA	S4W084	Pandoravirus	29.9	3.4e-23
WP_001107467.1|4028710_4030645_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	G8DDJ2	Micromonas_pusilla_virus	43.6	6.3e-118
>prophage 302
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4037419	4038897	4639229		Indivirus(50.0%)	2	NA	NA
WP_001047336.1|4037419_4038391_+	octaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	25.8	6.0e-08
WP_000445413.1|4038618_4038897_+	DNA-binding transcriptional regulator SfsB	NA	A0A2I7S995	Vibrio_phage	71.4	2.6e-17
>prophage 303
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4042965	4057760	4639229		Staphylococcus_phage(25.0%)	17	NA	NA
WP_000438245.1|4042965_4043775_-	phospholipid ABC transporter ATP-binding protein MlaF	NA	G3M9Y6	Bacillus_virus	29.3	2.2e-19
WP_000922901.1|4043984_4044962_+	calcium/sodium antiporter	NA	NA	NA	NA	NA
WP_001295557.1|4044975_4045962_+	arabinose-5-phosphate isomerase KdsD	NA	A0A2P0VNK5	Tetraselmis_virus	31.5	1.9e-38
WP_000030005.1|4045982_4046549_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	75.7	1.4e-54
WP_000030537.1|4046545_4047121_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_000669785.1|4047089_4047647_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA	NA
WP_000224099.1|4047653_4048379_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	3.2e-22
WP_000809057.1|4048426_4049860_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_001176599.1|4049882_4050170_+	ribosome hibernation promoting factor	NA	A0A0M7QCF2	Escherichia_phage	44.3	2.5e-10
WP_000183676.1|4050287_4050779_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
WP_000243741.1|4050824_4051679_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.4	1.1e-05
WP_000216791.1|4051675_4051948_+	PTS phosphocarrier protein NPr	NA	NA	NA	NA	NA
WP_000620405.1|4052161_4052794_+	PhoP regulatory network protein YrbL	NA	NA	NA	NA	NA
WP_000047091.1|4052790_4053519_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_001300411.1|4053515_4054169_-	isoprenoid biosynthesis glyoxalase ElbB	NA	NA	NA	NA	NA
WP_000809774.1|4054398_4056735_-	aerobic respiration two-component sensor histidine kinase ArcB	NA	A0A1V0SGX0	Hokovirus	31.2	1.7e-40
WP_001299745.1|4056830_4057760_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	35.0	8.8e-17
>prophage 304
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4069411	4076284	4639229	transposase	Escherichia_phage(33.33%)	7	NA	NA
WP_010723085.1|4069411_4070428_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
WP_001067008.1|4070635_4071352_+	DUF1120 domain-containing protein	NA	NA	NA	NA	NA
WP_000445111.1|4071536_4072664_+	DUF1016 domain-containing protein	NA	A0A0U2BZN7	Salmonella_phage	88.5	4.7e-73
WP_000979882.1|4072723_4073188_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
WP_000209011.1|4073184_4074060_-	N-acetylmannosamine kinase	NA	NA	NA	NA	NA
WP_000054239.1|4074056_4074746_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_000108454.1|4074793_4076284_-	sialic acid transporter NanT	NA	Q6JIH2	Burkholderia_virus	23.6	6.4e-09
>prophage 305
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4079988	4080486	4639229	protease	Pseudomonas_phage(100.0%)	1	NA	NA
WP_000366129.1|4079988_4080486_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	42.9	3.3e-26
>prophage 306
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4084452	4086977	4639229	protease	uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_001295271.1|4084452_4085820_+|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.6	2.3e-21
WP_000497723.1|4085909_4086977_+	outer membrane-stress sensor serine endopeptidase DegS	NA	A0A1S5Y2X3	uncultured_archaeal_virus	24.2	6.8e-05
>prophage 307
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4103753	4104797	4639229		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_000913396.1|4103753_4104797_-	rod shape-determining protein MreB	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
>prophage 308
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4115362	4116247	4639229		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_001258895.1|4115362_4116247_+	adenine-specific DNA-methyltransferase	NA	M4QNN5	Ostreococcus_lucimarinus_virus	30.2	1.9e-24
>prophage 309
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4126145	4126904	4639229		Bacillus_virus(100.0%)	1	NA	NA
WP_000078349.1|4126145_4126904_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	9.1e-20
>prophage 310
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4137399	4138871	4639229	tRNA	Synechococcus_phage(50.0%)	2	NA	NA
WP_000114984.1|4137399_4137909_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.9	3.9e-19
WP_000004473.1|4137923_4138871_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-06
>prophage 311
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4160086	4162039	4639229		Vibrio_phage(100.0%)	1	NA	NA
WP_001326512.1|4160086_4162039_+	type II secretion system secretin GspD	NA	R9TEZ5	Vibrio_phage	30.9	9.2e-32
>prophage 312
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4176989	4182563	4639229		uncultured_Caudovirales_phage(50.0%)	7	NA	NA
WP_000031783.1|4176989_4178174_-	elongation factor Tu	NA	A0A2K9L516	Tupanvirus	26.1	4.4e-13
WP_000124700.1|4178244_4180359_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.5	5.2e-57
WP_001138045.1|4180386_4180926_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_000246815.1|4181022_4181397_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000903373.1|4181522_4181810_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_000820714.1|4181817_4182177_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	31.0	1.4e-10
WP_001209680.1|4182176_4182563_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	39.8	3.3e-18
>prophage 313
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4188133	4197674	4639229		Tupanvirus(25.0%)	9	NA	NA
WP_000634798.1|4188133_4190047_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	33.5	4.3e-74
WP_000057356.1|4190046_4191069_+	hydrolase	NA	NA	NA	NA	NA
WP_000907085.1|4191062_4191281_+	YheU family protein	NA	A0A2H4J8A7	uncultured_Caudovirales_phage	40.3	3.1e-05
WP_001274680.1|4191334_4192204_+	phosphoribulokinase	NA	NA	NA	NA	NA
WP_001148908.1|4192258_4192663_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000242755.1|4192964_4193597_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA	NA
WP_001295162.1|4193647_4195738_+	membrane protein	NA	H9YQA8	environmental_Halophage	100.0	1.7e-76
WP_000963792.1|4195804_4197025_-	bifunctional acetylornithine/succinyldiaminopimelate transaminase	NA	NA	NA	NA	NA
WP_000601847.1|4197110_4197674_-	aminodeoxychorismate synthase component 2	NA	A0A0P0IKJ1	Acinetobacter_phage	55.8	1.2e-61
>prophage 314
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4221921	4222758	4639229		Vibrio_phage(100.0%)	1	NA	NA
WP_000742143.1|4221921_4222758_-	adenine-specific DNA-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	49.1	4.9e-67
>prophage 315
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4239662	4243429	4639229		Bacillus_phage(66.67%)	3	NA	NA
WP_001265681.1|4239662_4241285_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	52.5	5.3e-142
WP_001253696.1|4241360_4242713_-	two-component system sensor histidine kinase EnvZ	NA	W8CYF6	Bacillus_phage	23.8	3.6e-11
WP_001157751.1|4242709_4243429_-	two-component system response regulator OmpR	NA	W8CYM9	Bacillus_phage	34.7	3.5e-29
>prophage 316
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4250011	4250890	4639229		Sodalis_phage(100.0%)	1	NA	NA
WP_000039062.1|4250011_4250890_+	recombination-promoting nuclease RpnA	NA	Q2A0A7	Sodalis_phage	52.8	1.9e-69
>prophage 317
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4256924	4259318	4639229		Iris_mild_mosaic_virus(100.0%)	1	NA	NA
WP_000081909.1|4256924_4259318_-	maltodextrin phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	42.5	4.3e-15
>prophage 318
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4263697	4264924	4639229		Ralstonia_phage(100.0%)	1	NA	NA
WP_001105504.1|4263697_4264924_-	RNA-splicing ligase RtcB	NA	A0A1L7N133	Ralstonia_phage	60.0	4.0e-134
>prophage 319
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4270979	4273427	4639229		Dickeya_phage(100.0%)	1	NA	NA
WP_000993449.1|4270979_4273427_-	glycogen phosphorylase	NA	A0A140XAG6	Dickeya_phage	81.0	2.1e-33
>prophage 320
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4294215	4296026	4639229		Enterococcus_phage(50.0%)	2	NA	NA
WP_000073623.1|4294215_4294959_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	24.9	9.9e-11
WP_000907792.1|4294955_4296026_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	33.7	1.7e-19
>prophage 321
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4299569	4301052	4639229		Planktothrix_phage(50.0%)	2	NA	NA
WP_000416891.1|4299569_4300283_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF	NA	G9BWD6	Planktothrix_phage	31.1	7.0e-14
WP_000082101.1|4300284_4301052_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.6	4.9e-13
>prophage 322
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4306774	4309593	4639229		Salicola_phage(50.0%)	3	NA	NA
WP_000130217.1|4306774_4307629_-	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	41.9	3.5e-44
WP_001042003.1|4307873_4308932_-	cell division protein FtsX	NA	NA	NA	NA	NA
WP_000617723.1|4308924_4309593_-	cell division ATP-binding protein FtsE	NA	A0A2H4PQG7	Staphylococcus_phage	25.1	5.0e-14
>prophage 323
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4312596	4316728	4639229		Dickeya_phage(50.0%)	4	NA	NA
WP_000964718.1|4312596_4313223_+	lysoplasmalogenase	NA	A0A140XAH6	Dickeya_phage	61.9	1.2e-30
WP_000106551.1|4313296_4315495_+	Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA	NA	E4ZFI9	Streptococcus_phage	38.4	8.5e-119
WP_000130621.1|4315596_4315842_-	sulfurtransferase TusA	NA	A0A140XB86	Dickeya_phage	83.3	8.0e-10
WP_001100469.1|4316062_4316728_+	7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter	NA	A0A2I7SAW6	Vibrio_phage	53.1	2.8e-57
>prophage 324
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4324621	4330273	4639229		Bacillus_virus(50.0%)	3	NA	NA
WP_000173631.1|4324621_4325428_+	nickel import ATP-binding protein NikE	NA	G3M9Y6	Bacillus_virus	29.1	2.6e-17
WP_001190062.1|4325433_4325835_+	nickel-responsive transcriptional regulator NikR	NA	NA	NA	NA	NA
WP_000015298.1|4326037_4330273_+	rhs element protein RhsB	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	32.3	7.3e-26
>prophage 325
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4333648	4336384	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000149156.1|4333648_4336384_-	ribosome-associated ATPase/putative transporter RbbA	NA	A0A2H4PQG7	Staphylococcus_phage	30.6	5.4e-22
>prophage 326
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4349985	4352028	4639229		Indivirus(100.0%)	1	NA	NA
WP_001298719.1|4349985_4352028_-	oligopeptidase A	NA	A0A1V0SD92	Indivirus	23.1	6.8e-46
>prophage 327
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4355373	4362748	4639229	transposase	uncultured_Caudovirales_phage(60.0%)	8	NA	NA
WP_000008957.1|4355373_4355727_+	arsenical resistance operon transcriptional regulator ArsR	NA	A0A2H4J145	uncultured_Caudovirales_phage	50.9	9.7e-25
WP_000922639.1|4355780_4357070_+	arsenite/antimonite:H(+) antiporter ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	73.5	4.6e-173
WP_000065769.1|4357082_4357508_+	glutaredoxin-dependent arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.7	1.5e-51
WP_000020601.1|4358136_4358919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010723085.1|4359027_4360044_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
WP_001350553.1|4360806_4361373_+	outer membrane lipoprotein Slp	NA	NA	NA	NA	NA
WP_000478619.1|4361528_4362059_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001296814.1|4362100_4362748_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.5	6.1e-17
>prophage 328
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4408709	4410694	4639229		Bacillus_virus(50.0%)	2	NA	NA
WP_000107012.1|4408709_4409714_-	dipeptide ABC transporter ATP binding subunit DppF	NA	G3M9Y6	Bacillus_virus	29.9	1.1e-17
WP_001196486.1|4409710_4410694_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	3.9e-15
>prophage 329
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4420906	4423240	4639229		Escherichia_phage(100.0%)	1	NA	NA
WP_000013950.1|4420906_4423240_-	biotin sulfoxide reductase	NA	A0A077SK27	Escherichia_phage	29.2	2.7e-70
>prophage 330
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4426894	4428894	4639229	transposase	Morganella_phage(50.0%)	3	NA	NA
WP_000014594.1|4426894_4427107_+	RNA chaperone/antiterminator CspA	NA	A0A1W6JNX5	Morganella_phage	72.9	2.7e-22
WP_001135732.1|4427293_4427446_-	type I toxin-antitoxin system toxin HokA	NA	NA	NA	NA	NA
WP_085947770.1|4427525_4428894_+|transposase	IS3-like element IS150 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	100.0	1.3e-112
>prophage 331
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4432732	4433728	4639229		Escherichia_coli_O157_typing_phage(100.0%)	1	NA	NA
WP_001182650.1|4432732_4433728_+	O-acetyltransferase WecH	NA	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	26.7	9.1e-12
>prophage 332
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4439046	4440588	4639229		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001146473.1|4439046_4440588_+	D-xylose ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.3	3.3e-16
>prophage 333
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4464862	4473162	4639229	tRNA	Tupanvirus(50.0%)	4	NA	NA
WP_000582468.1|4464862_4466707_-	selenocysteine-specific translation elongation factor	NA	A0A2K9KZ60	Tupanvirus	26.7	5.6e-15
WP_000206275.1|4466703_4468095_-|tRNA	L-seryl-tRNA(Sec) selenium transferase	tRNA	NA	NA	NA	NA
WP_000779792.1|4468192_4468801_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_000015300.1|4469028_4473162_+	RHS element protein RhsA	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	32.9	2.7e-25
>prophage 334
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4491036	4501765	4639229		Rhizobium_phage(16.67%)	10	NA	NA
WP_000024392.1|4491036_4491288_-	glutaredoxin 3	NA	V9QKN6	Rhizobium_phage	54.8	2.0e-16
WP_001156181.1|4491429_4491861_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_001350558.1|4492105_4493650_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_001214147.1|4493659_4494943_+	murein hydrolase activator EnvC	NA	G9BW84	Planktothrix_phage	34.3	1.0e-07
WP_000483847.1|4494946_4495906_+	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_000982115.1|4495892_4496927_-	UDP-glucuronate:LPS(HepIII) glycosyltransferase	NA	A0A1V0SAH6	Catovirus	28.7	5.8e-09
WP_000646007.1|4497165_4498191_-	L-threonine 3-dehydrogenase	NA	R9TPW0	Vibrio_phage	84.6	2.1e-19
WP_001213834.1|4498200_4499397_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	29.4	4.9e-36
WP_014639028.1|4499671_4500544_-	protein YibB	NA	NA	NA	NA	NA
WP_000587764.1|4500832_4501765_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SL51	Synechococcus_phage	39.3	1.1e-35
>prophage 335
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4516670	4521233	4639229		uncultured_Mediterranean_phage(25.0%)	7	NA	NA
WP_001171866.1|4516670_4517150_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.0	4.8e-27
WP_001114543.1|4517188_4517998_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	F8WPX6	Bacillus_phage	32.2	2.6e-25
WP_001051798.1|4518095_4518263_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000091955.1|4518283_4518520_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_001350561.1|4518736_4519405_-	RadC family protein	NA	NA	NA	NA	NA
WP_000050139.1|4519576_4520797_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	33.9	6.5e-44
WP_001393518.1|4520777_4521233_+	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	59.5	1.2e-48
>prophage 336
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4524605	4531354	4639229		Morganella_phage(25.0%)	6	NA	NA
WP_001350563.1|4524605_4525430_+	DNA damage-inducible protein D	NA	A0A1W6JPJ7	Morganella_phage	78.9	1.0e-96
WP_000924289.1|4525719_4526337_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_000870036.1|4526333_4528016_-	NAD-dependent DNA ligase LigB	NA	F8SJM3	Pseudomonas_phage	22.3	1.5e-22
WP_001295237.1|4528273_4528897_+	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	34.5	4.1e-18
WP_000135058.1|4528951_4529227_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000280488.1|4529245_4531354_+	bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	NA	A0A291L9W9	Bordetella_phage	34.5	4.8e-10
>prophage 337
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4535790	4537182	4639229		environmental_Halophage(100.0%)	1	NA	NA
WP_001295238.1|4535790_4537182_+	xanthine/proton symporter XanP	NA	H9YQ34	environmental_Halophage	100.0	1.4e-71
>prophage 338
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4549300	4550635	4639229		Moraxella_phage(100.0%)	1	NA	NA
WP_001403836.1|4549300_4550635_-	adenine permease AdeQ	NA	A0A0R6PHV4	Moraxella_phage	37.2	1.1e-65
>prophage 339
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4557941	4566962	4639229		Micromonas_sp._RCC1109_virus(25.0%)	10	NA	NA
WP_000168475.1|4557941_4559630_-	acetolactate synthase large subunit	NA	E5EQ70	Micromonas_sp._RCC1109_virus	29.7	3.2e-57
WP_001300753.1|4559735_4559834_-	ilvB operon leader peptide IvbL	NA	NA	NA	NA	NA
WP_001054909.1|4560398_4560488_+	type I toxin-antitoxin system toxin TisB	NA	NA	NA	NA	NA
WP_000828746.1|4560767_4561952_+	multidrug efflux MFS transporter EmrD	NA	S4TR35	Salmonella_phage	23.5	8.9e-14
WP_000148061.1|4561959_4562457_-	radical SAM protein	NA	NA	NA	NA	NA
WP_001113432.1|4562453_4562816_-	DUF202 domain-containing protein	NA	NA	NA	NA	NA
WP_000703959.1|4562805_4563153_-	YidH family protein	NA	NA	NA	NA	NA
WP_000511289.1|4563260_4563710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000828527.1|4563756_4565250_-	sulfatase-like hydrolase/transferase	NA	A0A2K9L1A5	Tupanvirus	25.6	2.3e-30
WP_001087145.1|4565246_4566962_-	solute:sodium symporter family transporter	NA	A0A240F3J2	Aeromonas_phage	29.6	5.6e-41
>prophage 340
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4573314	4574268	4639229		Synechococcus_phage(50.0%)	2	NA	NA
WP_001243431.1|4573314_4573743_-	heat shock chaperone IbpB	NA	A0A1D8KPX5	Synechococcus_phage	36.4	2.1e-13
WP_001243437.1|4573854_4574268_-	heat shock chaperone IbpA	NA	A0A1D7SU06	Cyanophage	36.2	1.0e-17
>prophage 341
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4578695	4579844	4639229		Oenococcus_phage(100.0%)	1	NA	NA
WP_000705001.1|4578695_4579844_-	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	32.8	3.6e-52
>prophage 342
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4584550	4591919	4639229		Bacillus_virus(33.33%)	8	NA	NA
WP_000072067.1|4584550_4586965_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.6	3.7e-115
WP_000060112.1|4586993_4588067_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000673464.1|4588066_4589167_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	35.0	4.1e-53
WP_000059111.1|4589171_4590575_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_120795392.1|4590871_4590952_+	protein YsdD	NA	NA	NA	NA	NA
WP_000831330.1|4591181_4591322_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_000239730.1|4591338_4591698_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_001307474.1|4591661_4591919_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	56.7	5.4e-17
>prophage 343
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4602117	4603455	4639229		Moraxella_phage(100.0%)	1	NA	NA
WP_000019348.1|4602117_4603455_-	adenine permease AdeP	NA	A0A0R6PHV4	Moraxella_phage	35.7	2.6e-62
>prophage 344
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4614438	4622046	4639229		Bacillus_phage(25.0%)	6	NA	NA
WP_000063125.1|4614438_4615212_-	phosphate ABC transporter ATP-binding protein PstB	NA	W8CYL7	Bacillus_phage	31.7	4.0e-15
WP_001251998.1|4615394_4616285_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_000741620.1|4616284_4617244_-	phosphate ABC transporter permease PstC	NA	NA	NA	NA	NA
WP_000867146.1|4617330_4618371_-	phosphate ABC transporter substrate-binding protein PstS	NA	A0A1D7SRJ6	Cyanophage	38.3	2.7e-51
WP_000334099.1|4618684_4620514_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	43.4	1.9e-132
WP_000933736.1|4620675_4622046_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7I9	Chrysochromulina_ericina_virus	36.7	3.1e-34
>prophage 345
NZ_CP042844	Escherichia coli strain JME66 chromosome, complete genome	4639229	4634000	4634993	4639229		Heterosigma_akashiwo_virus(100.0%)	1	NA	NA
WP_000845104.1|4634000_4634993_+	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	37.7	2.2e-50
