The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044543	Bradyrhizobium betae strain PL7HG1 chromosome, complete genome	7150095	1112145	1121736	7150095		Escherichia_phage(42.86%)	8	NA	NA
WP_151642758.1|1112145_1114242_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	54.5	4.6e-13
WP_151642759.1|1114499_1116191_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	56.3	1.5e-14
WP_151642760.1|1116355_1117645_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	40.2	1.5e-67
WP_151642761.1|1117641_1118424_-	TIM barrel protein	NA	NA	NA	NA	NA
WP_151642762.1|1118438_1119356_-	NAD-binding protein	NA	A0A077SLF7	Escherichia_phage	49.3	1.4e-67
WP_162005882.1|1119459_1120134_+	aldolase	NA	A0A077SK32	Escherichia_phage	48.3	1.0e-46
WP_151642764.1|1120316_1121021_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	26.5	1.9e-11
WP_151642765.1|1121004_1121736_-	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	28.2	4.4e-11
>prophage 2
NZ_CP044543	Bradyrhizobium betae strain PL7HG1 chromosome, complete genome	7150095	1312338	1379574	7150095	protease,holin,bacteriocin	Bacillus_phage(37.5%)	58	NA	NA
WP_151642931.1|1312338_1313358_-|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.8	1.1e-17
WP_151642933.1|1313451_1313901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151642935.1|1313908_1315507_-|holin	choline dehydrogenase	holin	NA	NA	NA	NA
WP_151642937.1|1315710_1316499_+	thermonuclease family protein	NA	NA	NA	NA	NA
WP_151642939.1|1316854_1317667_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_151642941.1|1317680_1318235_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_151642943.1|1318236_1319037_+	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.2	1.1e-10
WP_151642945.1|1319227_1320559_-	sorbosone dehydrogenase family protein	NA	NA	NA	NA	NA
WP_151642947.1|1322148_1323006_+	VOC family protein	NA	NA	NA	NA	NA
WP_143843915.1|1323084_1323360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151642949.1|1323576_1324524_+	transglycosylase SLT domain-containing protein	NA	A0A0S2SXN2	Bacillus_phage	32.9	6.0e-13
WP_151642951.1|1324528_1324912_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_151642953.1|1324923_1325628_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_151642955.1|1325674_1327474_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_151642957.1|1327698_1328610_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_151642959.1|1328753_1329998_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_151642961.1|1330026_1330902_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_151642963.1|1330898_1333439_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FFL6	Cedratvirus	25.9	3.3e-05
WP_151642965.1|1333442_1334426_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_151642967.1|1334464_1334647_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151642969.1|1334877_1335477_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167527512.1|1335500_1335737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151642973.1|1335997_1337242_+	MFS transporter	NA	NA	NA	NA	NA
WP_151642975.1|1337299_1338505_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_151642977.1|1338683_1339772_+	uroporphyrinogen decarboxylase	NA	Q6A202	Oenococcus_phage	27.1	2.4e-29
WP_151642979.1|1339962_1341111_+	amidohydrolase	NA	NA	NA	NA	NA
WP_151642981.1|1341112_1341301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151642983.1|1341390_1341906_+	DUF892 family protein	NA	NA	NA	NA	NA
WP_151642985.1|1341972_1343160_-	CoA transferase	NA	NA	NA	NA	NA
WP_151642987.1|1343326_1344214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015687775.1|1344371_1344611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151642989.1|1344720_1347603_-|bacteriocin	NHLP bacteriocin export ABC transporter permease/ATPase subunit	bacteriocin	W8CYL7	Bacillus_phage	25.8	7.2e-25
WP_151642991.1|1347599_1349765_-|bacteriocin	NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit	bacteriocin	W8CYL7	Bacillus_phage	26.3	1.5e-30
WP_151642993.1|1349757_1351023_-|bacteriocin	NHLP bacteriocin system secretion protein	bacteriocin	NA	NA	NA	NA
WP_151642995.1|1351134_1351674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151642997.1|1351897_1352155_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151642998.1|1353259_1355038_+	caspase family protein	NA	NA	NA	NA	NA
WP_151643000.1|1355244_1357107_+	caspase family protein	NA	NA	NA	NA	NA
WP_162005901.1|1357408_1358761_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_151643004.1|1359008_1359284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151643006.1|1359775_1361554_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_151643008.1|1361719_1362955_-	MFS transporter	NA	NA	NA	NA	NA
WP_151643010.1|1363233_1363992_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_151643012.1|1364194_1365856_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_151643014.1|1365990_1366920_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	32.6	7.6e-45
WP_008132970.1|1366992_1367244_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_162005902.1|1367851_1369780_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_151643018.1|1369971_1370526_+	nucleoside 2-deoxyribosyltransferase	NA	NA	NA	NA	NA
WP_151643020.1|1370551_1371286_+	TlyA family rRNA (cytidine-2'-O)-methyltransferase	NA	NA	NA	NA	NA
WP_151643022.1|1371278_1372526_+	methyltransferase	NA	NA	NA	NA	NA
WP_151643024.1|1372616_1373696_+	Tat pathway signal protein	NA	NA	NA	NA	NA
WP_151643026.1|1373692_1374295_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162006353.1|1374495_1375137_+	carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_151643028.1|1375344_1375977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151643030.1|1376156_1377035_-	DUF1194 domain-containing protein	NA	NA	NA	NA	NA
WP_162006354.1|1377481_1378714_+	MFS transporter	NA	NA	NA	NA	NA
WP_151643032.1|1378745_1379129_+	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_151643034.1|1379268_1379574_+|protease	ATP-dependent Clp protease adapter ClpS	protease	NA	NA	NA	NA
>prophage 3
NZ_CP044543	Bradyrhizobium betae strain PL7HG1 chromosome, complete genome	7150095	6625392	6635459	7150095	tRNA	uncultured_Mediterranean_phage(88.89%)	12	NA	NA
WP_151650049.1|6625392_6626421_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	42.0	5.9e-22
WP_094890436.1|6626417_6627257_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.7	3.3e-31
WP_162006300.1|6627278_6628031_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	49.7	8.9e-44
WP_143845580.1|6628197_6628431_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	63.6	5.4e-08
WP_151650051.1|6628516_6629020_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_151650052.1|6629016_6629829_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	48.0	1.9e-55
WP_151650053.1|6630026_6631358_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.2	1.6e-99
WP_151650054.1|6631451_6631814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162006301.1|6631940_6632708_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	37.6	1.4e-36
WP_151650055.1|6632711_6633083_-	response regulator	NA	NA	NA	NA	NA
WP_162006435.1|6633343_6633961_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.4	1.6e-27
WP_151650057.1|6634070_6635459_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	40.9	2.4e-18
>prophage 4
NZ_CP044543	Bradyrhizobium betae strain PL7HG1 chromosome, complete genome	7150095	6844088	6852602	7150095	tail,tRNA	Arthrobacter_phage(33.33%)	9	NA	NA
WP_151650225.1|6844088_6844634_+|tail	phage tail protein	tail	A0A222ZFV4	Arthrobacter_phage	32.4	1.4e-14
WP_151650226.1|6844750_6845278_+|tail	phage tail protein	tail	A0A222ZG41	Arthrobacter_phage	35.3	1.9e-16
WP_151650227.1|6845341_6845887_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_151650228.1|6845908_6846424_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_151650229.1|6846420_6847377_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_167527525.1|6847578_6848793_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	34.6	3.0e-49
WP_151650231.1|6848795_6849482_+	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	38.2	4.8e-28
WP_151650232.1|6849478_6850525_+	DNA polymerase III subunit delta'	NA	S5WKH4	Pseudomonas_phage	28.7	9.6e-12
WP_151650233.1|6850634_6852602_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	38.7	1.3e-97
>prophage 1
NZ_CP044544	Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence	269307	80773	125137	269307	integrase,transposase	Burkholderia_virus(20.0%)	41	120050:120065	131980:131995
WP_012092607.1|80773_82213_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_040308433.1|82658_83585_+	DUF3991 domain-containing protein	NA	NA	NA	NA	NA
WP_002718983.1|83717_84110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002718985.1|85129_85735_+	DUF1419 domain-containing protein	NA	NA	NA	NA	NA
WP_002718986.1|85902_90999_+	DEAD/DEAH box helicase family protein	NA	I6NW45	Burkholderia_virus	41.2	0.0e+00
WP_002718987.1|91004_91508_-	RES domain-containing protein	NA	NA	NA	NA	NA
WP_002718988.1|91510_91861_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_002718989.1|92177_93863_+	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_002718990.1|93952_94420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002718991.1|94416_95310_+	hypothetical protein	NA	A0A1X9SH15	Bradyrhizobium_phage	33.5	5.0e-17
WP_002718992.1|95306_95720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002718993.1|96117_96705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002718994.1|97345_98278_+	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	39.4	1.9e-51
WP_002718995.1|98321_98750_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_040308436.1|98832_99258_+	mercury transporter MerT	NA	NA	NA	NA	NA
WP_002718997.1|99279_99573_+	mercuric transporter periplasmic component	NA	NA	NA	NA	NA
WP_040308437.1|99574_99820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002718999.1|99816_102078_+	bifunctional organomercurial lyase/mercury(II) reductase MerBA	NA	A0A2K5B2C5	Erysipelothrix_phage	30.1	1.2e-38
WP_043854945.1|103444_104605_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_052506852.1|104591_106418_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_043854944.1|106420_108307_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_063928869.1|108275_108752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043854942.1|109230_109527_+	DUF736 domain-containing protein	NA	NA	NA	NA	NA
WP_151650805.1|109673_109946_+	DUF736 family protein	NA	NA	NA	NA	NA
WP_002719001.1|110011_110281_+	DUF4326 domain-containing protein	NA	Q6UYH1	Burkholderia_phage	66.2	8.4e-21
WP_002719002.1|110281_110470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151650806.1|110490_111249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002719004.1|111280_111784_-	type II toxin-antitoxin system YhaV family toxin	NA	NA	NA	NA	NA
WP_002719005.1|111780_112116_-	type II toxin-antitoxin system PrlF family antitoxin	NA	NA	NA	NA	NA
WP_002719007.1|112559_113273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002719008.1|113269_116368_-	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_151650807.1|117161_118055_-	DUF1612 domain-containing protein	NA	NA	NA	NA	NA
WP_151650808.1|118141_119092_-	DUF1612 domain-containing protein	NA	NA	NA	NA	NA
WP_151650809.1|119202_120846_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
120050:120065	attL	ACCGGCCGATCGGCAA	NA	NA	NA	NA
WP_162006441.1|120826_121705_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_151650811.1|122153_122453_-	prevent-host-death protein	NA	NA	NA	NA	NA
WP_151650812.1|122574_122853_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_151650813.1|122849_123269_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_048758120.1|123351_123585_+	DUF433 domain-containing protein	NA	NA	NA	NA	NA
WP_048758121.1|123584_123953_+	DUF5615 family PIN-like protein	NA	NA	NA	NA	NA
WP_151650814.1|123952_125137_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
131980:131995	attR	TTGCCGATCGGCCGGT	NA	NA	NA	NA
>prophage 2
NZ_CP044544	Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence	269307	140777	187513	269307	transposase	Leptospira_phage(28.57%)	38	NA	NA
WP_167527529.1|140777_142442_-|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	39.5	4.6e-93
WP_100957201.1|142463_143602_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	34.8	7.7e-31
WP_151650822.1|144833_145034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100951630.1|145014_147084_+	recombinase family protein	NA	R4TNI9	Mycobacterium_phage	23.5	2.2e-12
WP_100957199.1|147456_148995_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	45.3	1.5e-125
WP_157817368.1|149206_149869_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	28.7	3.2e-05
WP_051404400.1|150617_150857_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_024585202.1|150937_152050_+	3-carboxy-cis,cis-muconate cycloisomerase	NA	NA	NA	NA	NA
WP_024585203.1|152136_153315_-	4-hydroxybenzoate 3-monooxygenase	NA	NA	NA	NA	NA
WP_024585204.1|153400_154027_-	protocatechuate 3,4-dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_024585205.1|154023_154752_-	protocatechuate 3,4-dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_029880289.1|154802_155843_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_024585207.1|155883_157212_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_024585208.1|157208_157760_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_157817367.1|157779_158625_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_024585210.1|158760_159339_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024585211.1|159352_160423_+	maleylacetate reductase	NA	NA	NA	NA	NA
WP_157817366.1|160828_161680_+	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA	NA
WP_024585213.1|161820_162093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145987137.1|162199_162730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151650824.1|162681_163809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100957191.1|165002_166238_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_080890817.1|166924_167506_+	ParA family protein	NA	NA	NA	NA	NA
WP_019200219.1|167629_168838_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019200218.1|169008_169875_+	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA	NA
WP_019200217.1|169896_170397_+	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	36.7	6.2e-17
WP_024585215.1|170393_172823_+	carbon-monoxide dehydrogenase large subunit	NA	NA	NA	NA	NA
WP_019200215.1|172974_173862_+	MoxR family ATPase	NA	NA	NA	NA	NA
WP_019200214.1|173863_175069_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_019200213.1|175073_175916_+	XdhC family protein	NA	NA	NA	NA	NA
WP_019200212.1|175915_176545_+	carbon monoxide dehydrogenase subunit G	NA	NA	NA	NA	NA
WP_024585216.1|177421_178246_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_043854939.1|179015_179651_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_080890809.1|179746_180898_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_100957189.1|180901_184057_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_100957187.1|184064_184712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100554963.1|184782_185622_+	universal stress protein	NA	NA	NA	NA	NA
WP_100554962.1|186372_187513_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	37.6	6.5e-38
