The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	327896	336272	5500376		Synechococcus_phage(33.33%)	8	NA	NA
WP_000625687.1|327896_329204_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.3	1.1e-20
WP_001170545.1|329292_330012_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	4.0e-49
WP_000278823.1|330004_330259_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666782.1|330255_330939_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000055594.1|330922_333142_+	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	41.2	3.3e-163
WP_000879034.1|333126_334542_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.0	7.3e-55
WP_001262424.1|334647_335688_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	46.3	5.5e-68
WP_000088579.1|335684_336272_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	9.1e-28
>prophage 2
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	674857	683015	5500376		Bacillus_phage(66.67%)	8	NA	NA
WP_114365429.1|674857_675844_-	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	29.4	4.2e-17
WP_000085772.1|675919_676441_+	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_000822548.1|676606_677998_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	29.8	2.6e-33
WP_000565487.1|678009_678687_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.6	2.9e-33
WP_000738865.1|678862_680110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000277057.1|680243_680774_+	DUF4352 domain-containing protein	NA	A0A0S2MVG4	Bacillus_phage	34.3	8.6e-17
WP_000831286.1|680786_681131_+	DUF4064 domain-containing protein	NA	A0A0S2MVJ2	Bacillus_phage	78.1	8.5e-42
WP_000487912.1|681563_683015_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	54.2	1.7e-139
>prophage 3
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	1864578	1873433	5500376		Bacillus_phage(71.43%)	8	NA	NA
WP_000755524.1|1864578_1865871_+	NlpC/P60 family protein	NA	A0A1V0DZX6	Clostridioides_phage	30.3	2.9e-10
WP_001194308.1|1865970_1866735_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000453881.1|1866971_1868732_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	99.2	1.5e-275
WP_000612415.1|1868772_1869450_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	99.6	3.0e-123
WP_001231613.1|1869446_1870520_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	99.7	3.7e-192
WP_000818985.1|1870747_1871467_+	3-ketoacyl-ACP reductase	NA	W8CYX9	Bacillus_phage	100.0	5.9e-61
WP_002083265.1|1872179_1872434_+	hypothetical protein	NA	W8CYN0	Bacillus_phage	100.0	4.5e-40
WP_001258546.1|1872563_1873433_+	aminoglycoside 6-adenylyltransferase	NA	E4ZFP8	Streptococcus_phage	44.6	5.6e-66
>prophage 4
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	2059943	2066853	5500376		Bacillus_phage(33.33%)	9	NA	NA
WP_000427801.1|2059943_2060219_+	stage V sporulation protein S	NA	J9PTX7	Bacillus_phage	41.2	2.9e-08
WP_000478848.1|2060417_2060681_+	hypothetical protein	NA	A0A218KBU4	Bacillus_phage	38.9	3.4e-06
WP_074789606.1|2060864_2061068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000541075.1|2061327_2061675_-	YolD-like family protein	NA	A0A2H4JEH6	uncultured_Caudovirales_phage	27.1	2.5e-09
WP_000109862.1|2061861_2062935_+	tetratricopeptide repeat protein	NA	A0A2H4J8G3	uncultured_Caudovirales_phage	42.0	6.9e-74
WP_000709202.1|2062931_2063057_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000499713.1|2063376_2064204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000165966.1|2064313_2064961_+	HD domain-containing protein	NA	S4W232	Pandoravirus	28.3	2.5e-10
WP_000783172.1|2064957_2066853_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2H4UUX5	Bodo_saltans_virus	25.5	2.8e-46
>prophage 5
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	3360614	3452358	5500376	holin,integrase,capsid,terminase,coat,portal,tail,protease,head	Bacillus_phage(81.82%)	88	3440459:3440476	3463296:3463313
WP_000679359.1|3360614_3361610_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_000251480.1|3361610_3362816_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	A0A2P1ELT3	Moumouvirus	34.5	1.6e-47
WP_000699376.1|3362815_3363778_-	NAD-dependent epimerase/dehydratase family protein	NA	M1IGU2	Acanthocystis_turfacea_Chlorella_virus	31.8	7.7e-32
WP_000465155.1|3363774_3364800_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	34.2	1.3e-37
WP_001280560.1|3365013_3366417_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_001124407.1|3366421_3367189_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.8	1.1e-07
WP_001183018.1|3367472_3368759_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000782791.1|3369511_3370081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001033598.1|3370495_3371911_+	phosphatidylinositol-specific phospholipase C	NA	NA	NA	NA	NA
WP_000769023.1|3372183_3373560_-	chitin-binding protein	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	36.2	1.3e-21
WP_001204206.1|3374872_3375916_+	cell filamentation protein Fic	NA	NA	NA	NA	NA
WP_000055704.1|3376735_3378229_+	spore germination protein	NA	NA	NA	NA	NA
WP_000527367.1|3378230_3379334_+	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA	NA
WP_000619983.1|3379330_3380458_+	Ger(x)C family spore germination protein	NA	NA	NA	NA	NA
WP_001046794.1|3380868_3381543_+	papain-like cysteine peptidase	NA	NA	NA	NA	NA
WP_000864426.1|3382106_3382856_+	NTP transferase domain-containing protein	NA	NA	NA	NA	NA
WP_001087534.1|3382876_3384946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000633065.1|3385000_3385960_+	NAD(P)-dependent oxidoreductase	NA	A0A2K9L0I7	Tupanvirus	26.2	3.3e-19
WP_000934343.1|3385988_3387077_+	CDP-glucose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	27.9	3.3e-15
WP_000116956.1|3388239_3389355_+	tetratricopeptide repeat protein	NA	A0A2H4J8G3	uncultured_Caudovirales_phage	56.1	1.3e-112
WP_000481863.1|3389666_3391649_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	36.7	7.9e-15
WP_000088964.1|3392669_3393044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000524430.1|3393301_3393637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000819434.1|3395176_3395725_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000527920.1|3396050_3398258_-	S-layer protein	NA	NA	NA	NA	NA
WP_033795298.1|3398717_3399986_-	cellulase family glycosylhydrolase	NA	NA	NA	NA	NA
WP_002162674.1|3400498_3400729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025989074.1|3400880_3403610_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	26.6	8.6e-12
WP_003310157.1|3404635_3405982_+	ABC-F type ribosomal protection protein	NA	Q6DMX7	Streptococcus_phage	23.8	1.9e-20
WP_000520485.1|3406262_3406868_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_080548767.1|3407375_3407990_-	alpha-hemolysin	NA	NA	NA	NA	NA
WP_000745810.1|3408342_3409173_+	hypothetical protein	NA	A0A2H4J6G7	uncultured_Caudovirales_phage	69.6	6.7e-101
WP_000548071.1|3409182_3409803_-	hypothetical protein	NA	H0USY2	Bacillus_phage	100.0	6.5e-117
WP_014895307.1|3409744_3410926_-	cell division protein FtsK	NA	H0USY1	Bacillus_phage	100.0	7.3e-226
WP_000170782.1|3411041_3411224_-	hypothetical protein	NA	Q2I8E2	Bacillus_phage	88.3	3.0e-22
WP_001257567.1|3411220_3411538_-	hypothetical protein	NA	H0USY0	Bacillus_phage	100.0	9.9e-53
WP_000834294.1|3411711_3411912_+	helix-turn-helix transcriptional regulator	NA	A0A288WG80	Bacillus_phage	47.7	1.0e-07
WP_001033468.1|3411908_3412127_+	hypothetical protein	NA	A0A288WFV9	Bacillus_phage	48.3	5.6e-07
WP_000043393.1|3412096_3412675_+	hypothetical protein	NA	H0USX9	Bacillus_phage	100.0	2.6e-107
WP_000924202.1|3412963_3413545_+	hypothetical protein	NA	H0USX8	Bacillus_phage	100.0	1.8e-100
WP_001068398.1|3414155_3414797_-	N-acetylmuramoyl-L-alanine amidase	NA	W8CZ46	Bacillus_phage	88.9	2.3e-109
WP_014895309.1|3414855_3415281_-|holin	phage holin family protein	holin	H0USX7	Bacillus_phage	100.0	5.7e-72
WP_000389535.1|3415356_3415581_-	hypothetical protein	NA	H0USX6	Bacillus_phage	100.0	8.3e-30
WP_001260181.1|3415704_3419730_-	hypothetical protein	NA	H0USX5	Bacillus_phage	100.0	0.0e+00
WP_000900857.1|3419726_3421211_-	hypothetical protein	NA	H0USX4	Bacillus_phage	100.0	2.2e-296
WP_001262739.1|3421222_3425254_-|tail	phage tail tape measure protein	tail	H0USX3	Bacillus_phage	100.0	0.0e+00
WP_000779154.1|3425474_3425792_-	hypothetical protein	NA	H0USX2	Bacillus_phage	100.0	1.1e-54
WP_000896770.1|3425840_3426449_-|tail	tail protein	tail	W8CYT6	Bacillus_phage	100.0	5.8e-102
WP_000609192.1|3426449_3426809_-	DUF3168 domain-containing protein	NA	H0USX0	Bacillus_phage	100.0	4.5e-62
WP_000763219.1|3426805_3427240_-	HK97 gp10 family phage protein	NA	H0USW9	Bacillus_phage	100.0	1.8e-76
WP_001068030.1|3427232_3427556_-|head	phage head closure protein	head	H0USW8	Bacillus_phage	100.0	1.1e-56
WP_000244597.1|3427542_3427830_-|head,tail	phage gp6-like head-tail connector protein	head,tail	H0USW7	Bacillus_phage	100.0	1.8e-45
WP_003263053.1|3427850_3429017_-|capsid	phage major capsid protein	capsid	H0USW6	Bacillus_phage	100.0	3.3e-210
WP_001259161.1|3429054_3429765_-|protease	Clp protease ClpP	protease	H0USW5	Bacillus_phage	100.0	3.2e-128
WP_000577485.1|3429751_3431005_-|portal	phage portal protein	portal	H0USW4	Bacillus_phage	100.0	1.2e-242
WP_000621122.1|3431193_3432888_-|terminase	terminase large subunit	terminase	H0USW3	Bacillus_phage	99.6	0.0e+00
WP_000940125.1|3432889_3433393_-|terminase	phage terminase small subunit P27 family	terminase	H0USW2	Bacillus_phage	100.0	8.0e-89
WP_001139462.1|3433521_3433899_-	HNH endonuclease	NA	H0USW1	Bacillus_phage	100.0	4.0e-69
WP_001198488.1|3433888_3434143_-	hypothetical protein	NA	H0USW0	Bacillus_phage	100.0	1.1e-43
WP_000778970.1|3434276_3434489_-	hypothetical protein	NA	H0USV9	Bacillus_phage	100.0	7.1e-31
WP_000002724.1|3434485_3434764_-	hypothetical protein	NA	H0USV8	Bacillus_phage	100.0	1.2e-41
WP_000443967.1|3434756_3434978_-	hypothetical protein	NA	H0USV7	Bacillus_phage	100.0	1.9e-31
WP_000017441.1|3435012_3435300_-	hypothetical protein	NA	H0USV6	Bacillus_phage	100.0	8.6e-48
WP_000930963.1|3435729_3435954_-	hypothetical protein	NA	H0USV5	Bacillus_phage	100.0	1.5e-34
WP_001012129.1|3436169_3436712_-|integrase	site-specific integrase	integrase	H0USV4	Bacillus_phage	100.0	1.9e-96
WP_000166145.1|3436708_3437194_-	ArpU family transcriptional regulator	NA	H0USV3	Bacillus_phage	100.0	6.1e-86
WP_000965619.1|3437553_3437835_-	hypothetical protein	NA	A0A0S2GLD3	Bacillus_phage	100.0	8.7e-45
WP_000074683.1|3438770_3438965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000055205.1|3439164_3439428_-	hypothetical protein	NA	H0USV0	Bacillus_phage	100.0	1.0e-42
WP_000362234.1|3439795_3439999_-	hypothetical protein	NA	A0A1B1P8C8	Bacillus_phage	55.2	7.5e-14
WP_001270306.1|3440039_3440432_-	hypothetical protein	NA	H0USU9	Bacillus_phage	100.0	2.1e-76
3440459:3440476	attL	ACTATTTTGTTTGATTTC	NA	NA	NA	NA
WP_001092479.1|3440459_3440768_-	hypothetical protein	NA	H0USU8	Bacillus_phage	100.0	5.1e-54
WP_003259886.1|3440929_3441127_-	hypothetical protein	NA	H0USU7	Bacillus_phage	100.0	6.6e-31
WP_000705117.1|3441499_3441799_+	hypothetical protein	NA	H0USU6	Bacillus_phage	100.0	3.3e-50
WP_001025406.1|3441795_3442011_-	hypothetical protein	NA	A0A0S2GLC6	Bacillus_phage	100.0	8.7e-37
WP_000817807.1|3442028_3442193_-	DUF3954 domain-containing protein	NA	A0A0S2GLF5	Bacillus_phage	100.0	1.0e-24
WP_000436950.1|3442264_3442531_-	hypothetical protein	NA	W8CYZ5	Bacillus_phage	100.0	2.7e-43
WP_000705175.1|3442572_3443385_-	hypothetical protein	NA	W8CZ50	Bacillus_phage	100.0	1.6e-155
WP_014895311.1|3443347_3444352_-	hypothetical protein	NA	H0USU2	Bacillus_phage	100.0	4.6e-189
WP_000123129.1|3444596_3445244_-	sigma-70 family RNA polymerase sigma factor	NA	H0USU1	Bacillus_phage	100.0	5.2e-117
WP_000176229.1|3445517_3445832_-	hypothetical protein	NA	H0USU0	Bacillus_phage	100.0	2.4e-51
WP_000348892.1|3445994_3446774_-	phage regulatory protein	NA	H0UST9	Bacillus_phage	100.0	6.2e-141
WP_000277643.1|3446991_3447180_-	helix-turn-helix domain-containing protein	NA	A0A1B2APY7	Phage_Wrath	80.6	2.6e-21
WP_000368958.1|3447324_3447570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000005254.1|3447816_3448146_+	helix-turn-helix transcriptional regulator	NA	H0UST7	Bacillus_phage	100.0	1.3e-52
WP_000466635.1|3448566_3449820_-	hypothetical protein	NA	H0UST6	Bacillus_phage	100.0	1.9e-216
WP_042992861.1|3449961_3450192_-	hypothetical protein	NA	H0UST5	Bacillus_phage	100.0	7.9e-36
WP_000237490.1|3451296_3452358_+|integrase	site-specific integrase	integrase	H0UST3	Bacillus_phage	100.0	7.6e-198
3463296:3463313	attR	GAAATCAAACAAAATAGT	NA	NA	NA	NA
>prophage 6
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	3511864	3522213	5500376	bacteriocin	Bacillus_phage(100.0%)	11	NA	NA
WP_000730121.1|3511864_3512848_+	helix-turn-helix domain-containing protein	NA	A0A0S2MVF4	Bacillus_phage	74.9	1.1e-134
WP_003262705.1|3512873_3513494_-	hypothetical protein	NA	H0USY2	Bacillus_phage	95.6	1.1e-111
WP_014895314.1|3513435_3514617_-	cell division protein FtsK	NA	H0USY1	Bacillus_phage	95.7	1.2e-217
WP_000170774.1|3514732_3514915_-	hypothetical protein	NA	Q2I8E2	Bacillus_phage	90.0	1.0e-22
WP_001256514.1|3514911_3515229_-	hypothetical protein	NA	H0USY0	Bacillus_phage	97.1	3.2e-51
WP_001009469.1|3515434_3515638_+	helix-turn-helix transcriptional regulator	NA	Q2I8E4	Bacillus_phage	56.1	2.2e-13
WP_001171598.1|3515642_3516227_+	hypothetical protein	NA	A0A288WFT6	Bacillus_phage	74.3	1.1e-81
WP_000405770.1|3516616_3517321_-	N-acetylmuramoyl-L-alanine amidase	NA	W8CZ46	Bacillus_phage	84.4	2.9e-113
WP_000392441.1|3517320_3517551_-|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A1B1P7Q9	Bacillus_phage	87.8	1.6e-28
WP_003261708.1|3517617_3517842_-	hypothetical protein	NA	A0A1B1P780	Bacillus_phage	75.0	5.9e-20
WP_014895315.1|3517941_3522213_-	hypothetical protein	NA	A0A0A0RPU4	Bacillus_phage	37.2	4.2e-138
>prophage 7
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	3526653	3552394	5500376	terminase,integrase,capsid	Bacillus_phage(56.52%)	36	3516169:3516187	3563340:3563358
3516169:3516187	attL	AAGAACAAGTAGATAAGAT	NA	NA	NA	NA
WP_014895319.1|3526653_3527844_-|capsid	phage major capsid protein	capsid	A0A1B1IV93	uncultured_Mediterranean_phage	28.2	2.3e-33
WP_000917220.1|3527859_3528708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000791086.1|3528791_3529046_-	hypothetical protein	NA	A0A1B1P7N4	Bacillus_phage	86.6	6.5e-39
WP_000668389.1|3529045_3529306_-	DUF2829 domain-containing protein	NA	S5MAK7	Bacillus_phage	70.6	4.3e-30
WP_003269488.1|3529305_3529557_-	DUF2829 domain-containing protein	NA	A0A1B0VMG3	Pseudomonas_phage	54.2	3.3e-19
WP_000366285.1|3529556_3529832_-	DUF2829 domain-containing protein	NA	A0A0A7AQX0	Bacillus_phage	59.0	9.2e-23
WP_000467413.1|3529832_3531956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000124815.1|3532013_3532214_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000222862.1|3532227_3532458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014895320.1|3532454_3533870_-|terminase	phage terminase large subunit	terminase	U5PVG8	Bacillus_phage	69.3	9.1e-191
WP_000515245.1|3533883_3534420_-	hypothetical protein	NA	A5GYP7	Lactococcus_phage	56.3	9.5e-40
WP_003259446.1|3534462_3535035_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	48.1	4.9e-42
WP_003309811.1|3535187_3535370_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000248554.1|3535455_3535611_-	BC1881 family protein	NA	NA	NA	NA	NA
WP_000876114.1|3535895_3536111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001072816.1|3536472_3536847_-	ArpU family transcriptional regulator	NA	Q9ZXB9	Bacillus_phage	40.7	6.0e-17
WP_000164426.1|3537516_3538314_-	phage antirepressor KilAC domain-containing protein	NA	A0A1Q1PVZ8	Staphylococcus_phage	52.1	1.5e-73
WP_000520931.1|3538348_3538531_-	hypothetical protein	NA	A0A1B1P7L7	Bacillus_phage	58.5	2.9e-09
WP_000973815.1|3539106_3539841_-	sigma-70 family RNA polymerase sigma factor	NA	C7DTL2	Bacillus_phage	51.2	2.1e-58
WP_003269482.1|3539824_3540091_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000762586.1|3540256_3540979_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000323349.1|3540968_3541637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000049838.1|3541652_3542078_-	DUF1064 domain-containing protein	NA	A0A2P1JTY5	Anoxybacillus_phage	51.9	4.1e-30
WP_000049348.1|3542090_3542570_-	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000611881.1|3542575_3543208_-	DNA replication protein	NA	S6B1M2	Thermus_phage	52.5	2.7e-57
WP_000224585.1|3544356_3545163_-	recombination protein RecT	NA	S6AVW6	Thermus_phage	67.1	1.1e-95
WP_000543065.1|3545184_3546120_-	hypothetical protein	NA	S6C475	Thermus_phage	58.5	2.2e-100
WP_000572113.1|3546198_3546393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000866208.1|3546385_3546649_-	hypothetical protein	NA	A0A2H4J4P5	uncultured_Caudovirales_phage	52.5	7.2e-17
WP_000167563.1|3546649_3546952_-	hypothetical protein	NA	H0USU0	Bacillus_phage	66.7	9.5e-29
WP_000187073.1|3547229_3547877_-	sigma-70 family RNA polymerase sigma factor	NA	W8CYN8	Bacillus_phage	89.3	6.0e-105
WP_000549470.1|3547897_3548086_-	helix-turn-helix transcriptional regulator	NA	A0A0S2GLE9	Bacillus_phage	74.2	1.4e-17
WP_000819158.1|3548151_3548358_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003259427.1|3548527_3548872_+	helix-turn-helix transcriptional regulator	NA	H0UST7	Bacillus_phage	40.6	1.4e-15
WP_000947503.1|3549274_3550495_-	hypothetical protein	NA	A0A0U3TNF6	Bacillus_phage	50.9	1.1e-112
WP_000237495.1|3551302_3552394_+|integrase	site-specific integrase	integrase	A0A0S2GLI2	Bacillus_phage	79.8	2.5e-164
3563340:3563358	attR	ATCTTATCTACTTGTTCTT	NA	NA	NA	NA
>prophage 8
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	3667716	3676972	5500376		Bacillus_phage(40.0%)	13	NA	NA
WP_000413739.1|3667716_3668337_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.2	8.2e-19
WP_000976234.1|3668427_3669231_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_000031383.1|3669231_3669774_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_001102628.1|3669766_3670090_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_151874106.1|3670454_3670700_-	hypothetical protein	NA	A0A1C8E996	Bacillus_phage	58.9	3.9e-09
WP_001051376.1|3670752_3671595_-	M23 family metallopeptidase	NA	A0A218KCJ1	Bacillus_phage	47.7	1.4e-32
WP_000981476.1|3671718_3672708_-	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	43.3	7.6e-35
WP_000464432.1|3672942_3673329_-	hypothetical protein	NA	A0A288WG73	Bacillus_phage	68.3	5.4e-45
WP_000511422.1|3673737_3674625_-	DnaD domain protein	NA	A0A2H4J394	uncultured_Caudovirales_phage	64.6	1.0e-94
WP_001189066.1|3674777_3674972_-	hypothetical protein	NA	A0A2H4J4V8	uncultured_Caudovirales_phage	72.6	2.6e-16
WP_000531298.1|3674983_3675742_-	phage regulatory protein	NA	A0A2H4JBC7	uncultured_Caudovirales_phage	70.2	4.1e-97
WP_000283161.1|3675938_3676151_-	hypothetical protein	NA	A6M975	Geobacillus_virus	63.0	1.3e-11
WP_000708856.1|3676312_3676972_+	helix-turn-helix domain-containing protein	NA	A0A2H4J441	uncultured_Caudovirales_phage	41.0	8.7e-35
>prophage 9
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	3731067	3861210	5500376	holin,integrase,bacteriocin,capsid,terminase,coat,portal,head,tail,protease,tRNA	Bacillus_phage(43.4%)	118	3752033:3752050	3860445:3860462
WP_000878483.1|3731067_3731424_-|holin	CidA/LrgA family holin-like protein	holin	NA	NA	NA	NA
WP_000454959.1|3731457_3732891_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_000006462.1|3733077_3733269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000351405.1|3733284_3733494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000008148.1|3733782_3735498_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	47.2	2.5e-09
WP_001244684.1|3735697_3736678_-	phosphatidylinositol diacylglycerol-lyase	NA	NA	NA	NA	NA
WP_000689209.1|3736857_3738699_-	peptidase	NA	NA	NA	NA	NA
WP_000771008.1|3738993_3739791_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A172JHR8	Bacillus_phage	39.4	2.8e-35
WP_000272409.1|3740056_3741394_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_000791034.1|3741898_3743818_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	36.8	4.4e-95
WP_001235297.1|3743915_3746699_-	HSR1-like GTP-binding protein	NA	NA	NA	NA	NA
WP_000461138.1|3747203_3747389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000516485.1|3747666_3749631_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.7	1.5e-61
WP_000195994.1|3749639_3752318_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	24.5	1.8e-33
3752033:3752050	attL	CTGTTTTTGGATCTTCCA	NA	NA	NA	NA
WP_001288799.1|3752498_3753041_-|coat	outer spore coat protein CotE	coat	NA	NA	NA	NA
WP_000870460.1|3753167_3753599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001005392.1|3753602_3755132_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_000190155.1|3755560_3756427_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA	NA
WP_000625417.1|3756413_3758171_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA	NA
WP_003309838.1|3758396_3759356_-	membrane dipeptidase	NA	NA	NA	NA	NA
WP_000404341.1|3759378_3759639_-	stage V sporulation protein SpoVS	NA	J9PTX7	Bacillus_phage	43.8	8.4e-10
WP_001221092.1|3759788_3760583_-	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA	NA
WP_000099770.1|3760741_3762307_-	ribonuclease Y	NA	NA	NA	NA	NA
WP_001283853.1|3762790_3763822_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	71.5	3.2e-137
WP_000990684.1|3763966_3765205_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_001052967.1|3765225_3765804_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000137465.1|3765869_3766784_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000574107.1|3766805_3767591_-	DUF3388 domain-containing protein	NA	NA	NA	NA	NA
WP_000114444.1|3767729_3767978_-	DUF3243 domain-containing protein	NA	NA	NA	NA	NA
WP_000759625.1|3768053_3768767_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_000411971.1|3768867_3770154_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	28.4	3.8e-10
WP_000772416.1|3770154_3771429_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	30.3	1.6e-56
WP_000008857.1|3771638_3772598_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_001085255.1|3772598_3773657_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000456929.1|3773649_3775182_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	1.1e-11
WP_000725767.1|3775299_3776376_-	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	33.6	5.6e-47
WP_000114182.1|3776468_3777194_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001118795.1|3777731_3780113_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	51.4	2.0e-89
WP_000605020.1|3780325_3780529_-	ribonuclease	NA	NA	NA	NA	NA
WP_000139825.1|3780525_3781275_-	translocation-enhancing protein TepA	NA	NA	NA	NA	NA
WP_000823089.1|3781379_3783050_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000564763.1|3783976_3784855_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_000692456.1|3784866_3786099_-	aspartate kinase	NA	NA	NA	NA	NA
WP_000414846.1|3786122_3787169_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_085960240.1|3787319_3787556_-	dipicolinate synthase	NA	NA	NA	NA	NA
WP_002000636.1|3787758_3789465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000050864.1|3789479_3789968_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000722940.1|3790651_3791158_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000540632.1|3791359_3792169_-	N-acetylmuramoyl-L-alanine amidase	NA	D2XR33	Bacillus_phage	83.3	2.0e-134
WP_001261076.1|3792168_3792405_-|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A2H4JGN9	uncultured_Caudovirales_phage	100.0	1.7e-25
WP_001075307.1|3792435_3792801_-	hypothetical protein	NA	A0A0S2MVE0	Bacillus_phage	69.7	2.8e-43
WP_001260218.1|3792822_3797142_-	hypothetical protein	NA	A0A0S2MVB4	Bacillus_phage	62.6	0.0e+00
WP_000094137.1|3797138_3798608_-|tail	phage tail protein	tail	A0A0S2MV63	Bacillus_phage	78.3	2.3e-229
WP_000415912.1|3802508_3802871_-	hypothetical protein	NA	A0A2H4JAG8	uncultured_Caudovirales_phage	70.8	2.4e-42
WP_001004907.1|3802875_3803463_-|tail	phage tail protein	tail	A0A2H4JDV4	uncultured_Caudovirales_phage	82.1	5.1e-87
WP_000176454.1|3803463_3803799_-	hypothetical protein	NA	D2XR22	Bacillus_phage	90.8	2.0e-51
WP_000997535.1|3803795_3804140_-	HK97 gp10 family phage protein	NA	A0A2H4JAH8	uncultured_Caudovirales_phage	79.6	6.3e-45
WP_003310446.1|3804141_3804492_-|head	phage head closure protein	head	D2XR20	Bacillus_phage	86.2	2.1e-51
WP_001243202.1|3804493_3804790_-	hypothetical protein	NA	D2XR19	Bacillus_phage	90.6	2.3e-43
WP_000152777.1|3804802_3805966_-|capsid	phage major capsid protein	capsid	A0A2H4JH29	uncultured_Caudovirales_phage	95.9	2.7e-209
WP_000216398.1|3805985_3806759_-|protease	Clp protease ClpP	protease	R9TLM7	Paenibacillus_phage	54.1	7.0e-60
WP_043333521.1|3806742_3807849_-|portal	phage portal protein	portal	A0A2H4JAJ1	uncultured_Caudovirales_phage	89.9	3.1e-186
WP_000635288.1|3807914_3809570_-|terminase	terminase large subunit	terminase	A0A2H4JI41	uncultured_Caudovirales_phage	95.5	6.1e-311
WP_000763336.1|3809566_3809923_-	hypothetical protein	NA	A0A2H4JBV9	uncultured_Caudovirales_phage	100.0	3.6e-59
WP_001209624.1|3810073_3810409_-	HNH endonuclease	NA	D2XR61	Bacillus_phage	91.0	4.7e-53
WP_000877970.1|3810374_3810647_-	hypothetical protein	NA	A0A1B1P7D2	Bacillus_phage	47.8	1.8e-07
WP_000778987.1|3810643_3810865_-	hypothetical protein	NA	B5LPQ8	Bacillus_virus	75.7	1.9e-23
WP_001099642.1|3811143_3811584_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_000434817.1|3813108_3813309_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	72.7	6.3e-21
WP_001012125.1|3813431_3813974_-|integrase	site-specific integrase	integrase	W8CYP1	Bacillus_phage	91.7	8.6e-89
WP_000192854.1|3813973_3814438_-	ArpU family transcriptional regulator	NA	D2XR57	Bacillus_phage	92.2	1.1e-73
WP_000032820.1|3816026_3817343_+	collagen-like protein	NA	A0A285PWR0	Cedratvirus	62.6	4.4e-38
WP_000512856.1|3818383_3818575_-	DUF3954 domain-containing protein	NA	D2XR48	Bacillus_phage	63.5	6.4e-15
WP_001126004.1|3818648_3819011_-	hypothetical protein	NA	D2XR47	Bacillus_phage	88.3	1.6e-54
WP_000926798.1|3818985_3819174_-	hypothetical protein	NA	D2XR45	Bacillus_phage	85.5	9.7e-16
WP_000063910.1|3819176_3820499_-	replicative DNA helicase	NA	D2XR44	Bacillus_phage	95.0	5.1e-236
WP_000312141.1|3820495_3821446_-	DnaD domain protein	NA	D2XR43	Bacillus_phage	61.2	7.7e-85
WP_000998369.1|3821725_3822010_-	hypothetical protein	NA	D2XR42	Bacillus_phage	55.3	1.9e-23
WP_000782004.1|3822193_3822493_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000354295.1|3822489_3822705_-	hypothetical protein	NA	A0A0S2GLC6	Bacillus_phage	69.0	1.0e-24
WP_000215309.1|3822888_3823110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000537277.1|3823123_3823711_-	hypothetical protein	NA	D2XR41	Bacillus_phage	69.7	2.2e-74
WP_001141265.1|3823801_3824050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001060851.1|3824084_3824276_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000900757.1|3824449_3824887_+	helix-turn-helix domain-containing protein	NA	A0A2P1JU09	Anoxybacillus_phage	55.2	7.5e-35
WP_000351864.1|3824900_3825335_+	ImmA/IrrE family metallo-endopeptidase	NA	D2XR38	Bacillus_phage	79.0	5.1e-60
WP_001046154.1|3825490_3826294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000844788.1|3826566_3828114_+	recombinase family protein	NA	I3VYZ3	Thermoanaerobacterium_phage	54.0	1.8e-144
WP_000954735.1|3828568_3829471_-	dipicolinic acid synthetase subunit A	NA	NA	NA	NA	NA
WP_001239759.1|3829641_3829893_-	YlmC/YmxH family sporulation protein	NA	NA	NA	NA	NA
WP_000593001.1|3830028_3831270_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	34.5	4.4e-56
WP_000868223.1|3831357_3832257_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_000076743.1|3832409_3834548_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_001229392.1|3834708_3834978_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_000766703.1|3835078_3836050_-	bifunctional riboflavin kinase/FAD synthetase	NA	A0A1V0SD03	Indivirus	31.8	2.1e-05
WP_000399363.1|3836093_3837017_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000776437.1|3837103_3837460_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000634349.1|3837475_3837757_-	DUF503 family protein	NA	NA	NA	NA	NA
WP_000036346.1|3837753_3839820_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	25.9	1.9e-19
WP_001286522.1|3839824_3840136_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000071123.1|3840136_3840409_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000102611.1|3840420_3841527_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000359095.1|3841544_3842015_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_000059996.1|3842348_3846650_-	PolC-type DNA polymerase III	NA	A0A0A8WJ41	Clostridium_phage	39.6	4.1e-24
WP_000814295.1|3846774_3848475_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_001090241.1|3848584_3849841_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_000790358.1|3849858_3851001_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_000813589.1|3851024_3851816_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000971296.1|3851833_3852610_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.5	9.0e-23
WP_000531505.1|3852695_3853253_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_000042669.1|3853255_3853978_-	UMP kinase	NA	NA	NA	NA	NA
WP_001018576.1|3854044_3854932_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_000111485.1|3855035_3855737_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_000421290.1|3856084_3856864_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_000550084.1|3856941_3858333_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	29.9	1.1e-47
WP_000526274.1|3858355_3858898_-|protease	ATP-dependent protease proteolytic subunit HslV	protease	NA	NA	NA	NA
WP_001101244.1|3858940_3859840_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.8	3.1e-35
WP_000213007.1|3859905_3861210_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
3860445:3860462	attR	CTGTTTTTGGATCTTCCA	NA	NA	NA	NA
>prophage 10
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	4279373	4290616	5500376	bacteriocin	Bacillus_phage(100.0%)	11	NA	NA
WP_000730122.1|4279373_4280357_+	helix-turn-helix domain-containing protein	NA	A0A0S2MVF4	Bacillus_phage	75.8	4.5e-136
WP_001025806.1|4280382_4281003_-	hypothetical protein	NA	H0USY2	Bacillus_phage	83.5	2.8e-99
WP_000891527.1|4280944_4282126_-	cell division protein FtsK	NA	H0USY1	Bacillus_phage	80.9	6.3e-185
WP_000170776.1|4282241_4282424_-	hypothetical protein	NA	Q2I8E2	Bacillus_phage	88.3	2.3e-22
WP_003256223.1|4282420_4282726_-	hypothetical protein	NA	A0A288WG38	Bacillus_phage	46.9	2.5e-21
WP_000403528.1|4282911_4283133_+	helix-turn-helix transcriptional regulator	NA	A0A0S2SXH7	Bacillus_phage	35.9	2.3e-08
WP_000110514.1|4283129_4283723_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_000405774.1|4284636_4285341_-	N-acetylmuramoyl-L-alanine amidase	NA	W8CZ46	Bacillus_phage	86.1	2.0e-114
WP_000392441.1|4285340_4285571_-|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A1B1P7Q9	Bacillus_phage	87.8	1.6e-28
WP_000389432.1|4285637_4285862_-	hypothetical protein	NA	A0A1B1P780	Bacillus_phage	76.4	2.7e-20
WP_151874108.1|4285960_4290616_-	4'-phosphopantetheinyl transferase	NA	A0A0A0RPU4	Bacillus_phage	32.8	8.0e-159
>prophage 11
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	4297445	4319935	5500376	terminase,integrase	Bacillus_phage(75.0%)	25	4311975:4311990	4325606:4325621
WP_014895339.1|4297445_4297697_-	DUF2829 domain-containing protein	NA	A0A1B0VMG3	Pseudomonas_phage	56.6	2.3e-20
WP_001009041.1|4297696_4297909_-	hypothetical protein	NA	A0A1C8E971	Bacillus_phage	94.3	5.2e-34
WP_000467411.1|4297909_4300033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000124816.1|4300091_4300292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000222861.1|4300305_4300536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042992865.1|4300532_4301948_-|terminase	phage terminase large subunit	terminase	U5PVG8	Bacillus_phage	70.2	9.8e-193
WP_000161455.1|4301991_4302498_-	hypothetical protein	NA	A0A090DCM3	Clostridium_phage	51.6	2.9e-38
WP_042992867.1|4302539_4303112_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	48.1	1.7e-42
WP_000483565.1|4304163_4304559_-	hypothetical protein	NA	A0A1C8E9D1	Bacillus_phage	66.4	5.7e-42
WP_000276479.1|4305004_4306870_-	DNA primase	NA	A0A1B1P7L5	Bacillus_phage	91.0	0.0e+00
WP_000417045.1|4307077_4307329_-	hypothetical protein	NA	A0A0A7AQI9	Bacillus_phage	38.7	7.1e-06
WP_014895342.1|4307330_4309019_-	hypothetical protein	NA	A0A1B1P7M5	Bacillus_phage	87.5	3.4e-301
WP_000818339.1|4309082_4309574_-	DUF669 domain-containing protein	NA	A0A1B1P7N3	Bacillus_phage	93.9	2.8e-86
WP_000268681.1|4309573_4309891_-	hypothetical protein	NA	A0A1B1P7N6	Bacillus_phage	75.2	5.1e-33
WP_000195964.1|4309914_4311834_-	AAA family ATPase	NA	A0A1B1P7N0	Bacillus_phage	83.0	3.4e-281
WP_000665151.1|4311833_4312112_-	nuclease	NA	A0A1B1P7M6	Bacillus_phage	87.0	2.1e-43
4311975:4311990	attL	AAACATTCCACCAATA	NA	NA	NA	NA
WP_001132421.1|4312112_4312430_-	hypothetical protein	NA	A0A1B1P7L0	Bacillus_phage	43.7	1.1e-11
WP_001175895.1|4312419_4313655_-	DEAD/DEAH box helicase	NA	A0A1B1P7L4	Bacillus_phage	86.5	8.2e-212
WP_000801520.1|4313702_4314347_-	sigma-70 family RNA polymerase sigma factor	NA	H0USU1	Bacillus_phage	64.2	4.9e-75
WP_000277639.1|4314367_4314556_-	helix-turn-helix domain-containing protein	NA	A0A1B2APY7	Phage_Wrath	75.8	9.4e-19
WP_001025461.1|4314567_4314765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000817630.1|4314960_4315281_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000351012.1|4315459_4315798_+	helix-turn-helix transcriptional regulator	NA	E9LUL4	Lactobacillus_phage	35.2	1.4e-09
WP_000466631.1|4316279_4317533_-	hypothetical protein	NA	H0UST6	Bacillus_phage	80.2	2.6e-173
WP_000237492.1|4318873_4319935_+|integrase	site-specific integrase	integrase	H0UST3	Bacillus_phage	81.9	6.5e-165
4325606:4325621	attR	AAACATTCCACCAATA	NA	NA	NA	NA
>prophage 12
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	4454933	4518062	5500376	protease,coat,transposase,tRNA	Klosneuvirus(20.0%)	60	NA	NA
WP_000125365.1|4454933_4456073_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	42.3	1.1e-82
WP_000354035.1|4456085_4457138_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_000138162.1|4457157_4457358_-	DUF2905 domain-containing protein	NA	NA	NA	NA	NA
WP_000344464.1|4457354_4458356_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	26.3	6.8e-07
WP_000464512.1|4458361_4458979_-	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
WP_000823610.1|4459167_4460112_+	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000871202.1|4460123_4460654_-	BofC protein	NA	NA	NA	NA	NA
WP_000874881.1|4461135_4461516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093530.1|4461549_4462197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151874109.1|4462375_4464241_-|coat	spore coat assembly protein ExsA	coat	NA	NA	NA	NA
WP_000025282.1|4464467_4465574_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_001092241.1|4465604_4466438_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_001138541.1|4466457_4467987_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_000973781.1|4468139_4469282_+	aminotransferase class V-fold PLP-dependent enzyme	NA	A0A1X7QGF3	Faustovirus	29.2	8.5e-30
WP_000812273.1|4469281_4469824_+	transcription repressor NadR	NA	NA	NA	NA	NA
WP_000511662.1|4469905_4470553_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_000796367.1|4470744_4471215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000621701.1|4471392_4472244_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001026364.1|4472340_4474251_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_001011408.1|4474300_4476223_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000114530.1|4476197_4476974_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	31.0	1.6e-19
WP_000865417.1|4477067_4478150_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_002082113.1|4478139_4478847_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000497121.1|4479035_4480322_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_001003585.1|4480326_4480869_-	sporulation protein	NA	NA	NA	NA	NA
WP_000944957.1|4480932_4481223_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_002082112.1|4481226_4481571_-|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_000270907.1|4481582_4481891_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_000855475.1|4482056_4483448_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_000599047.1|4483515_4484376_-	stage IV sporulation protein FB	NA	NA	NA	NA	NA
WP_000797477.1|4484368_4485115_-	stage IV sporulation protein SpoIVFA	NA	NA	NA	NA	NA
WP_000503309.1|4485248_4486046_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_000391514.1|4486048_4486735_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_000975762.1|4486770_4487316_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_001135484.1|4487330_4488182_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_000466736.1|4488223_4489243_-	rod shape-determining protein MreB	NA	NA	NA	NA	NA
WP_001013396.1|4489400_4490078_-	JAB domain-containing protein	NA	NA	NA	NA	NA
WP_000720491.1|4490124_4490700_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_000360995.1|4490932_4491883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000582072.1|4492047_4493349_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000072243.1|4493442_4496088_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	43.0	5.5e-165
WP_000350651.1|4496571_4497597_-|coat	spore coat protein YsxE	coat	NA	NA	NA	NA
WP_003256548.1|4497631_4498633_-	stage VI sporulation protein D	NA	NA	NA	NA	NA
WP_000712938.1|4498713_4500000_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	A0A1V0SKB7	Klosneuvirus	34.1	1.7e-05
WP_001087080.1|4499999_4500989_-	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_000992324.1|4501009_4501762_-	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_001226404.1|4501764_4502694_-	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_000009002.1|4502709_4503543_-	cytochrome c assembly protein	NA	NA	NA	NA	NA
WP_000547856.1|4503560_4504895_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_000133913.1|4505311_4505764_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000359773.1|4505766_4506183_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000869118.1|4506217_4506814_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA	NA
WP_000097281.1|4506810_4509141_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	43.7	7.3e-177
WP_000119171.1|4509323_4510994_-|protease	ATP-dependent protease LonB	protease	E3T4F6	Cafeteria_roenbergensis_virus	33.5	8.7e-15
WP_000472289.1|4511100_4512360_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	66.3	1.0e-148
WP_000105215.1|4512623_4513901_-	trigger factor	NA	NA	NA	NA	NA
WP_000358275.1|4514210_4515209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001983650.1|4515406_4515655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000475213.1|4516174_4516789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085960238.1|4516906_4518062_+|transposase	IS3-like element ISBt2 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	43.1	4.9e-33
>prophage 13
NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	5500376	4560264	4567952	5500376		Staphylococcus_phage(16.67%)	9	NA	NA
WP_000221121.1|4560264_4561188_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.5	2.6e-45
WP_000247674.1|4561313_4562249_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	26.6	3.4e-24
WP_000018046.1|4562250_4562943_-	response regulator transcription factor	NA	B5LWA6	Feldmannia_species_virus	26.9	6.8e-06
WP_001014310.1|4563287_4563482_+	YwbE family protein	NA	NA	NA	NA	NA
WP_001255945.1|4563521_4564721_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	41.0	6.1e-71
WP_000587818.1|4565015_4565339_+	heme oxygenase	NA	NA	NA	NA	NA
WP_002162479.1|4565411_4566176_-	class B sortase	NA	NA	NA	NA	NA
WP_000403765.1|4566208_4566979_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.6	1.7e-13
WP_001036830.1|4566968_4567952_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.2	4.2e-17
>prophage 1
NZ_CP045023	Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence	359606	29852	83627	359606	protease,transposase	Bacillus_phage(33.33%)	38	NA	NA
WP_000762743.1|29852_30251_+|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	68.2	2.6e-50
WP_000166246.1|30262_31375_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A286QQB7	Streptococcus_phage	45.5	5.1e-80
WP_001188811.1|31860_32607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001231608.1|32789_33722_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000893014.1|34350_35199_+	formate/nitrite transporter family protein	NA	NA	NA	NA	NA
WP_001038827.1|35986_36931_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_001243463.1|37485_38538_+	cell filamentation protein Fic	NA	NA	NA	NA	NA
WP_000082758.1|38713_40069_-	amino acid permease	NA	NA	NA	NA	NA
WP_000690460.1|40732_41845_+	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_000628924.1|41841_42843_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA	NA
WP_001284904.1|42937_44320_+	amino acid permease	NA	NA	NA	NA	NA
WP_000700712.1|44753_45779_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003256157.1|46338_48579_+	hypothetical protein	NA	G1FGA4	Mycobacterium_phage	47.3	1.2e-11
WP_080548774.1|48827_49013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043333206.1|49106_51473_+	DUF3472 domain-containing protein	NA	NA	NA	NA	NA
WP_043333208.1|51577_54313_+	S8 family serine peptidase	NA	Q2A0D0	Sodalis_phage	25.9	4.4e-16
WP_000821353.1|54935_55097_+	six-cysteine peptide SCIFF	NA	NA	NA	NA	NA
WP_000581828.1|55157_56564_+	thioether cross-link-forming SCIFF peptide maturase	NA	A0A1L7N0Q5	Ralstonia_phage	23.0	1.9e-10
WP_000491774.1|56708_57104_-	DUF3221 domain-containing protein	NA	NA	NA	NA	NA
WP_000167466.1|57417_58323_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_085960238.1|58384_59541_-|transposase	IS3-like element ISBt2 family transposase	transposase	A0A1B1P773	Bacillus_phage	42.7	3.5e-47
WP_000871007.1|59752_60727_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_000467334.1|61169_61400_-	helix-turn-helix transcriptional regulator	NA	S5MBY6	Brevibacillus_phage	43.2	9.4e-13
WP_043320231.1|62224_63682_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	30.2	4.4e-23
WP_000800736.1|63695_64361_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	5.1e-35
WP_000494781.1|65300_66494_+	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	32.3	5.1e-25
WP_001009326.1|66977_68408_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000447831.1|68419_69106_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	1.1e-24
WP_001043921.1|69258_69531_-	HU family DNA-binding protein	NA	A0A1P8CWT5	Bacillus_phage	60.0	3.5e-22
WP_000853266.1|69920_70163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000723694.1|70881_71226_+	BlaI/MecI/CopY family transcriptional regulator	NA	A0A0A8WJP7	Clostridium_phage	34.2	7.0e-12
WP_003255930.1|71285_72764_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_000721293.1|73348_74659_-	phosphatidylinositol-specific phospholipase C	NA	NA	NA	NA	NA
WP_000726947.1|75375_75939_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000686199.1|77481_78132_+	sugar phosphate isomerase	NA	NA	NA	NA	NA
WP_001194338.1|78505_79501_-	DUF4046 domain-containing protein	NA	NA	NA	NA	NA
WP_000619726.1|79767_81771_-	endochitinase	NA	M1H4X6	Acanthocystis_turfacea_Chlorella_virus	40.0	6.9e-43
WP_000586190.1|82505_83627_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	S6AND0	Bacillus_phage	81.8	5.6e-175
>prophage 2
NZ_CP045023	Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence	359606	97737	161500	359606	protease,transposase	Bacillus_phage(70.59%)	55	NA	NA
WP_001053998.1|97737_99171_+|transposase	IS4-like element IS231F family transposase	transposase	NA	NA	NA	NA
WP_001086889.1|99890_100292_+	BlaI/MecI/CopY family transcriptional regulator	NA	A0A0A8WJP7	Clostridium_phage	30.4	5.0e-09
WP_000468909.1|100294_101431_+	peptidase M56	NA	NA	NA	NA	NA
WP_003254688.1|101977_103156_+	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	34.9	7.7e-58
WP_003310472.1|103216_103936_+	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_043333210.1|104569_105124_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003254694.1|105513_105792_+	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA	NA
WP_000805735.1|105830_106337_+	DUF3902 family protein	NA	NA	NA	NA	NA
WP_000053755.1|107138_107732_-|protease	cell envelope-bound metalloprotease (camelysin)	protease	NA	NA	NA	NA
WP_085961348.1|108996_110338_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.1	5.7e-33
WP_043320313.1|110708_110891_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	A0A1B1P7U8	Bacillus_phage	88.3	2.6e-21
WP_080548811.1|111001_111409_-	DUF4870 domain-containing protein	NA	NA	NA	NA	NA
WP_000141883.1|111597_111846_-	hypothetical protein	NA	A0A288WFY7	Bacillus_phage	92.7	1.1e-35
WP_000981141.1|112509_113598_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	S6AND0	Bacillus_phage	78.8	3.3e-164
WP_000196759.1|113855_114248_-	DUF393 domain-containing protein	NA	NA	NA	NA	NA
WP_043320300.1|114385_114583_+	hypothetical protein	NA	A0A0A0RMG9	Bacillus_phage	45.5	5.6e-06
WP_000059259.1|116084_116492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000389273.1|117039_117288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001079532.1|117663_118017_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA	NA
WP_000151822.1|118446_118665_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001080993.1|118657_119131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001262251.1|119178_119718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001214614.1|119804_121568_-	sulfate permease	NA	A0A2H4J153	uncultured_Caudovirales_phage	24.4	5.5e-36
WP_000064032.1|121668_122109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000536399.1|122110_122461_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000864837.1|124244_124646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000954710.1|124979_125786_+	N-hydroxyarylamine O-acetyltransferase	NA	NA	NA	NA	NA
WP_000483139.1|126118_128098_+	DUF3472 domain-containing protein	NA	G1FGA4	Mycobacterium_phage	40.2	9.3e-08
WP_000424048.1|128819_129056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000264559.1|129178_129409_-	XRE family transcriptional regulator	NA	A0A1B1P883	Bacillus_phage	41.5	5.9e-07
WP_000958230.1|129628_129823_+	hypothetical protein	NA	W8CYN5	Bacillus_phage	56.2	2.7e-13
WP_000511835.1|129835_131002_+	DNA translocase FtsK	NA	W8CYG2	Bacillus_phage	83.2	3.7e-190
WP_001245886.1|130991_131603_+	hypothetical protein	NA	W8CZ47	Bacillus_phage	74.3	8.5e-85
WP_114365442.1|131688_131850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043333212.1|132023_133136_+	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_000064087.1|133132_134134_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA	NA
WP_001293931.1|134481_136971_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_001033628.1|138203_139187_-	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_001224400.1|139534_139984_+	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001097425.1|140548_142495_+	BglG family transcription antiterminator	NA	NA	NA	NA	NA
WP_000770306.1|142643_144599_+	PTS mannose transporter subunit IIABC	NA	NA	NA	NA	NA
WP_000138688.1|144616_145564_+	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA	NA
WP_000610358.1|146025_147258_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	26.1	1.0e-20
WP_000362061.1|147262_147955_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000454406.1|149472_150186_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	7.9e-34
WP_000581945.1|150182_152651_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001110937.1|152686_152848_+	S-layer protein	NA	NA	NA	NA	NA
WP_000428522.1|154013_155423_+	S-methylmethionine permease	NA	NA	NA	NA	NA
WP_000066234.1|155397_156375_+	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_000204906.1|157338_157632_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_043333216.1|158220_158775_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_114365441.1|159329_159662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000805753.1|159700_160207_+	DUF3902 family protein	NA	NA	NA	NA	NA
WP_080789126.1|160616_161078_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	67.9	3.6e-35
WP_000160158.1|161203_161500_-|transposase	IS3 family transposase	transposase	A0A1B1P776	Bacillus_phage	32.0	1.5e-07
>prophage 1
NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	349211	116711	126511	349211		Bacillus_phage(83.33%)	16	NA	NA
WP_003298979.1|116711_120005_+	DNA polymerase I	NA	S4U8J4	Listeria_phage	23.2	1.7e-25
WP_001198496.1|120052_120433_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000565922.1|120784_121003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000727297.1|121189_122275_+	DUF1002 domain-containing protein	NA	NA	NA	NA	NA
WP_003298982.1|122363_122684_+	hypothetical protein	NA	R4JDU4	Bacillus_phage	40.0	4.0e-09
WP_000071512.1|122717_122903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000442474.1|122927_123326_+	hypothetical protein	NA	U5J9G1	Bacillus_phage	39.3	2.4e-16
WP_000032377.1|123343_123541_+	hypothetical protein	NA	A0A218KBS9	Bacillus_phage	40.7	3.0e-07
WP_000085609.1|123547_124111_+	hypothetical protein	NA	A0A218KBS9	Bacillus_phage	48.2	2.0e-11
WP_003298987.1|124236_124716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000257080.1|124732_125077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000834751.1|125092_125392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000033408.1|125405_125594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000404429.1|125604_126120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001135708.1|126132_126339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001004734.1|126325_126511_+	hypothetical protein	NA	F8WPL1	Bacillus_phage	60.3	3.6e-15
>prophage 1
NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	235425	169981	180958	235425		Bacillus_phage(55.56%)	14	NA	NA
WP_001031181.1|169981_171598_+	hypothetical protein	NA	A0A0K2FMB2	Brevibacillus_phage	41.0	1.4e-131
WP_000691718.1|171709_172789_+	ATP-binding protein	NA	A0A0E3D9S6	Bacillus_phage	77.4	2.9e-160
WP_000398537.1|172838_173228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001173852.1|173296_174157_+	thymidylate synthase	NA	A0A0H3V0R8	Geobacillus_virus	47.7	1.3e-75
WP_000624473.1|174153_174672_+	dihydrofolate reductase	NA	A0A0E3D9G3	Bacillus_phage	40.4	1.5e-21
WP_000945823.1|174674_174884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000487831.1|174977_175868_+	DUF1071 domain-containing protein	NA	A0A1B1P7F0	Bacillus_phage	48.1	1.8e-30
WP_003254307.1|175997_176195_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000881565.1|176344_178306_+	AAA family ATPase	NA	A7KV33	Bacillus_phage	36.4	9.6e-106
WP_001023489.1|178336_178819_+	dUTP diphosphatase	NA	Q332E8	Clostridium_botulinum_C_phage	43.0	2.4e-26
WP_000583728.1|178815_179430_+	dTMP kinase	NA	A0A1V0QGB5	Shearwaterpox_virus	29.9	6.0e-14
WP_001068334.1|179433_179913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000156298.1|179937_180216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000548555.1|180208_180958_+	hypothetical protein	NA	A7KV01	Bacillus_phage	40.7	1.6e-16
>prophage 2
NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	235425	198935	234649	235425	tRNA	Bacillus_phage(60.71%)	52	NA	NA
WP_000180796.1|198935_199751_+	phage repressor protein/antirepressor Ant	NA	A0A2D1GQG9	Lysinibacillus_phage	58.1	2.0e-20
WP_003254024.1|199826_200438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003254025.1|200681_200954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001146641.1|200979_201615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000477626.1|201627_201951_+	hypothetical protein	NA	A0A1I9S626	Bacillus_phage	61.9	1.7e-20
WP_000642957.1|201925_202159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000500661.1|202158_202413_+	hypothetical protein	NA	A0A076G7F3	Bacillus_phage	67.5	2.1e-29
WP_001208820.1|202755_203190_+	hypothetical protein	NA	A0A127AXQ6	Bacillus_phage	46.2	1.1e-17
WP_000504037.1|203230_203422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000483063.1|203532_203820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001284343.1|203881_204310_+	nucleoside deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	38.1	3.1e-17
WP_000342987.1|204360_204570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000687311.1|204592_205420_+	metallophosphoesterase	NA	O64184	Bacillus_phage	66.9	4.2e-119
WP_001053438.1|205530_205722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000186693.1|205760_206186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000161131.1|206211_207015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000568325.1|207259_207514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000386129.1|207850_208291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001064689.1|208411_209134_+	hypothetical protein	NA	A7KUV4	Bacillus_phage	33.3	9.9e-16
WP_000499887.1|209108_210224_+	hypothetical protein	NA	A7XX66	Thermus_virus	28.9	9.3e-13
WP_003310329.1|210250_211456_+	AAA family ATPase	NA	A7KUV6	Bacillus_phage	44.7	1.9e-67
WP_000733263.1|211473_211722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000427813.1|211724_212162_+	hypothetical protein	NA	A7KV30	Bacillus_phage	39.4	2.3e-23
WP_000209660.1|212183_212618_+|tRNA	aspartyl-tRNA amidotransferase subunit B	tRNA	NA	NA	NA	NA
WP_000593824.1|212672_213638_+	hypothetical protein	NA	A0A173GBG1	Bacillus_phage	46.1	6.9e-57
WP_000220506.1|213664_215200_+	nicotinate phosphoribosyltransferase	NA	A0A218KC49	Bacillus_phage	67.8	4.0e-192
WP_014895378.1|215307_216189_+	nucleotide excision repair endonuclease	NA	A0A218KC00	Bacillus_phage	41.7	9.9e-18
WP_003254066.1|216319_216781_+	hypothetical protein	NA	A0A1I9S5V4	Bacillus_phage	67.1	3.4e-54
WP_001008937.1|216777_216987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000996769.1|217002_217653_+	tellurium resistance protein TerE	NA	S5M8H7	Bacillus_phage	38.2	1.4e-29
WP_000290289.1|217704_218307_+	TerD family protein	NA	A0A2I7QY15	Vibrio_phage	40.6	7.4e-25
WP_001207091.1|218311_218539_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000429546.1|218672_219422_+	hypothetical protein	NA	S5MAL1	Bacillus_phage	42.0	1.6e-40
WP_003310334.1|219441_220512_+	phosphoesterase	NA	NA	NA	NA	NA
WP_000886924.1|220531_221257_+	NAD-dependent protein deacylase	NA	A0A068EPD4	Bacillus_phage	32.5	1.7e-31
WP_000260123.1|221466_221988_+	hypothetical protein	NA	G3MBS8	Bacillus_virus	33.8	3.0e-14
WP_000145790.1|222073_223258_+	NupC family nucleoside transporter	NA	NA	NA	NA	NA
WP_000394584.1|223491_224388_+	S8 family peptidase	NA	A0A127AWU5	Bacillus_phage	46.6	1.1e-61
WP_000013355.1|224517_225156_+	sigma-70 family RNA polymerase sigma factor	NA	Q0SPI3	Clostridium_phage	35.9	9.3e-10
WP_000393454.1|225484_225871_+	Replication termination protein	NA	NA	NA	NA	NA
WP_000469986.1|225888_226167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001235407.1|226205_227303_-	tyrosine recombinase XerS	NA	A0A166YH27	Gordonia_phage	30.8	2.0e-07
WP_000634706.1|227487_227850_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	51.3	1.7e-29
WP_000019971.1|227831_229916_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	G3MBF2	Bacillus_virus	64.6	2.3e-267
WP_000626116.1|229934_230963_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	G3MBF3	Bacillus_virus	59.6	5.4e-108
WP_000404326.1|230995_231247_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_014895379.1|231246_231429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000386879.1|231694_232000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000138198.1|231992_232283_+	hypothetical protein	NA	A0A0S2SXU6	Bacillus_phage	60.2	1.5e-23
WP_000337749.1|232284_232539_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000130747.1|232535_233297_+	hypothetical protein	NA	X2JMW4	Bacillus_phage	62.2	7.3e-86
WP_000107146.1|233416_234649_+	WXG100 family type VII secretion target	NA	A0A2H4J389	uncultured_Caudovirales_phage	58.4	2.1e-66
>prophage 1
NZ_CP045026	Bacillus thuringiensis strain JW-1 plasmid p4, complete sequence	127921	2336	86737	127921	tRNA,transposase	Streptococcus_phage(35.71%)	54	NA	NA
WP_012211086.1|2336_3044_+|transposase	IS6-like element IS240A family transposase	transposase	A0A1X9I6E7	Streptococcus_phage	46.1	4.3e-40
WP_012211087.1|3611_4319_+|transposase	IS6-like element IS240A family transposase	transposase	A0A1X9I6E7	Streptococcus_phage	45.6	1.9e-40
WP_014895385.1|4341_4500_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	55.6	1.7e-05
WP_000520211.1|6450_8160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000413207.1|8958_10653_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000379360.1|11172_11412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000609617.1|11503_11989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000946482.1|14206_14824_+	hypothetical protein	NA	A0A1B1P7T2	Bacillus_phage	44.6	1.7e-45
WP_000797242.1|14971_15346_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000662056.1|15600_16032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429377.1|17371_18121_-	type-1Aa cytolytic delta-endotoxin	NA	NA	NA	NA	NA
WP_001056902.1|19149_19689_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000390241.1|19787_21719_+	pesticidal crystal protein cry11Aa	NA	NA	NA	NA	NA
WP_000138229.1|21999_22548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012211095.1|24976_25237_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_000525745.1|25849_26155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003310630.1|26386_27208_-	N-acetylmuramoyl-L-alanine amidase	NA	A0T2N4	Geobacillus_phage	42.6	1.8e-34
WP_000512651.1|27669_27981_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000550493.1|30318_31110_-	type-2Ba cytolytic delta-endotoxin	NA	NA	NA	NA	NA
WP_012211099.1|32594_36005_+	pesticidal crystal protein cry4Ba	NA	NA	NA	NA	NA
WP_001070502.1|39058_41086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012211087.1|44011_44719_+|transposase	IS6-like element IS240A family transposase	transposase	A0A1X9I6E7	Streptococcus_phage	45.6	1.9e-40
WP_000079177.1|45794_47372_-	toxin	NA	A0A0K2CYN4	Paenibacillus_phage	30.5	6.1e-10
WP_003310456.1|48822_49236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000939067.1|49413_49671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000416119.1|52584_52797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012211103.1|53206_53563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001075555.1|53927_54833_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_001053998.1|55932_57366_-|transposase	IS4-like element IS231F family transposase	transposase	NA	NA	NA	NA
WP_080548773.1|57660_58086_-	HAD-IIIC family phosphatase	NA	NA	NA	NA	NA
WP_103656266.1|58073_58802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001064652.1|58960_60010_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_001196890.1|60085_60946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000690668.1|61246_61798_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	53.3	3.2e-43
WP_000235461.1|61810_64792_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	45.5	3.1e-257
WP_001053998.1|65014_66448_-|transposase	IS4-like element IS231F family transposase	transposase	NA	NA	NA	NA
WP_080548787.1|67167_67416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000619971.1|69156_70284_-	Ger(x)C family spore germination protein	NA	NA	NA	NA	NA
WP_042993022.1|70280_71384_-	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA	NA
WP_000052380.1|71370_72879_-	spore germination protein	NA	NA	NA	NA	NA
WP_000730171.1|75072_75645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012211108.1|76164_76851_+|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	58.0	1.0e-70
WP_000185989.1|76922_77225_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001043041.1|77379_77658_+	HU family DNA-binding protein	NA	A3E2K9	Sodalis_phage	56.2	5.6e-20
WP_000453237.1|77710_77944_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_000648285.1|77965_78247_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A2I7SC16	Paenibacillus_phage	62.3	1.5e-12
WP_012211111.1|78368_78635_+	aspartyl-phosphate phosphatase Spo0E family protein	NA	NA	NA	NA	NA
WP_000620811.1|78787_79687_-	EamA family transporter	NA	NA	NA	NA	NA
WP_000762455.1|80049_81213_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_000943138.1|81247_82285_-	cysteine synthase family protein	NA	A0A1W6JHY1	Lactococcus_phage	35.4	1.2e-38
WP_000251827.1|82592_83300_-|tRNA	alanyl-tRNA editing protein	tRNA	NA	NA	NA	NA
WP_000637313.1|83347_84247_-	kinase	NA	NA	NA	NA	NA
WP_000454884.1|84372_85815_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_012211113.1|86029_86737_+|transposase	IS6-like element IS240A family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	44.1	7.4e-40
>prophage 1
NZ_CP045027	Bacillus thuringiensis strain JW-1 plasmid p5, complete sequence	14935	113	14576	14935		Bacillus_phage(100.0%)	22	NA	NA
WP_000538150.1|113_911_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A160LKP9	Bacillus_phage	100.0	1.5e-137
WP_001173934.1|926_1808_-	hypothetical protein	NA	A0A160LKP6	Bacillus_phage	100.0	1.7e-171
WP_000159134.1|1811_2726_-	hypothetical protein	NA	A0A161JRA8	Bacillus_phage	100.0	9.9e-146
WP_000819106.1|2738_3251_-	hypothetical protein	NA	A0A160LKQ7	Bacillus_phage	100.0	1.3e-91
WP_001162469.1|3198_3951_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A160LKR7	Bacillus_phage	100.0	3.4e-136
WP_001113796.1|3950_4565_-	hypothetical protein	NA	A0A160LKP5	Bacillus_phage	100.0	7.7e-78
WP_000384937.1|4568_4844_-	hypothetical protein	NA	A0A169E435	Bacillus_phage	100.0	1.7e-48
WP_001057983.1|5171_5603_-	hypothetical protein	NA	A0A160LKQ5	Bacillus_phage	100.0	6.4e-55
WP_000339993.1|5682_5889_-	hypothetical protein	NA	A0A160LKQ4	Bacillus_phage	100.0	2.5e-12
WP_000523935.1|5892_6123_-	hypothetical protein	NA	A0A160LLA6	Bacillus_phage	100.0	7.2e-37
WP_000068587.1|6164_7235_-	hypothetical protein	NA	A0A160LKS4	Bacillus_phage	100.0	2.7e-203
WP_000558559.1|7234_7489_-	hypothetical protein	NA	A0A160LKS3	Bacillus_phage	100.0	1.9e-38
WP_001013356.1|7802_8441_-	hypothetical protein	NA	A0A161J814	Bacillus_phage	100.0	3.0e-125
WP_014905374.1|8421_8730_-	hypothetical protein	NA	A0A160LKS9	Bacillus_phage	100.0	5.8e-58
WP_003257741.1|8786_9371_-	hypothetical protein	NA	A0A160LKS6	Bacillus_phage	100.0	5.3e-76
WP_003310637.1|9358_9796_-	hypothetical protein	NA	A0A160LKS8	Bacillus_phage	100.0	1.4e-25
WP_000957403.1|10381_10582_-	LexA repressor	NA	A0A161ISH4	Bacillus_phage	100.0	1.9e-30
WP_014905375.1|10597_12802_-	hypothetical protein	NA	A0A160LKS5	Bacillus_phage	100.0	0.0e+00
WP_001284666.1|12788_13526_-	hypothetical protein	NA	A0A160LKS7	Bacillus_phage	100.0	1.1e-131
WP_000991481.1|13584_13809_-	hypothetical protein	NA	A0A160LLB3	Bacillus_phage	100.0	4.0e-32
WP_000430104.1|13880_14384_-	hypothetical protein	NA	A0A160LKT4	Bacillus_phage	100.0	2.4e-85
WP_000040626.1|14399_14576_-	helix-turn-helix domain-containing protein	NA	Q7WSG8	Bacillus_phage	100.0	1.5e-23
