assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009025915.1_ASM902591v1	NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	1	652257-652332	1	CRISPRCasFinder	no	csa3	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh	Type I-A	ATCATCATCATGGAGGACACAATCA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh,RT,cas4	NA,NA	NA|335aa|up_9|NZ_CP045030.1_640978_641983_+	pfam01032, FecCD, FecCD transport family	NA|353aa|up_8|NZ_CP045030.1_641979_643038_+	pfam01032, FecCD, FecCD transport family	NA|274aa|up_7|NZ_CP045030.1_643050_643872_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|244aa|up_6|NZ_CP045030.1_643903_644635_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|397aa|up_5|NZ_CP045030.1_644848_646039_+	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|322aa|up_4|NZ_CP045030.1_646083_647049_+	cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs	NA|141aa|up_3|NZ_CP045030.1_647108_647531_+	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|628aa|up_2|NZ_CP045030.1_647568_649452_-	COG4548, NorD, Nitric oxide reductase activation protein [Inorganic ion transport and metabolism]	NA|298aa|up_1|NZ_CP045030.1_649455_650349_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|510aa|up_0|NZ_CP045030.1_650476_652006_-	PRK12452, PRK12452, cardiolipin synthase	NA|568aa|down_0|NZ_CP045030.1_653055_654759_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|466aa|down_1|NZ_CP045030.1_654790_656188_-	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family	NA|237aa|down_2|NZ_CP045030.1_656640_657351_+	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|476aa|down_3|NZ_CP045030.1_657493_658921_+	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component	NA|554aa|down_4|NZ_CP045030.1_658934_660596_+	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|369aa|down_5|NZ_CP045030.1_661733_662840_-	pfam03845, Spore_permease, Spore germination protein	NA|501aa|down_6|NZ_CP045030.1_662820_664323_-	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein	NA|274aa|down_7|NZ_CP045030.1_664511_665333_+	COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only]	NA|487aa|down_8|NZ_CP045030.1_665642_667103_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|244aa|down_9|NZ_CP045030.1_667234_667966_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
GCF_009025915.1_ASM902591v1	NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	2	1232164-1232291	2	CRISPRCasFinder	no		cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh	Orphan	AACAAGAACAACAAGAACAACAAGAACAA	29	1	7	1232244-1232262|1232244-1232262|1232244-1232262|1232244-1232262|1232244-1232262|1232244-1232262|1232244-1232262	NZ_CP045030.1_1232280-1232298|NZ_CP045030.1_1232289-1232307|NZ_CP045030.1_1232298-1232316|NZ_CP045030.1_259994-260012|NZ_CP045030.1_2063838-2063820|NZ_CP045030.1_2063928-2063910|NZ_CP045025.1_175527-175545	NA	2	2	Orphan	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh,RT,cas4	NA,NA|62aa|down_2|NZ_CP045030.1_1233669_1233855_+,NA|168aa|down_3|NZ_CP045030.1_1233932_1234436_-	NA|282aa|up_9|NZ_CP045030.1_1222388_1223234_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|297aa|up_8|NZ_CP045030.1_1223356_1224247_-	pfam18573, BclA_C, BclA C-terminal domain	NA|230aa|up_7|NZ_CP045030.1_1225719_1226409_+	pfam08242, Methyltransf_12, Methyltransferase domain	NA|229aa|up_6|NZ_CP045030.1_1226405_1227092_+	pfam13712, Glyco_tranf_2_5, Glycosyltransferase like family	NA|227aa|up_5|NZ_CP045030.1_1227106_1227787_+	pfam13712, Glyco_tranf_2_5, Glycosyltransferase like family	NA|246aa|up_4|NZ_CP045030.1_1227801_1228539_+	cd02538, G1P_TT_short, G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase	NA|182aa|up_3|NZ_CP045030.1_1228547_1229093_+	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|324aa|up_2|NZ_CP045030.1_1229108_1230080_+	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs	NA|285aa|up_1|NZ_CP045030.1_1230092_1230947_+	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|257aa|up_0|NZ_CP045030.1_1231055_1231826_+	PRK08594, PRK08594, enoyl-[acyl-carrier-protein] reductase FabI	NA|155aa|down_0|NZ_CP045030.1_1232618_1233083_-	pfam10612, Spore-coat_CotZ, Spore coat protein Z	NA|120aa|down_1|NZ_CP045030.1_1233208_1233568_+	pfam07098, DUF1360, Protein of unknown function (DUF1360)	NA|62aa|down_2|NZ_CP045030.1_1233669_1233855_+	NA	NA|168aa|down_3|NZ_CP045030.1_1233932_1234436_-	NA	NA|157aa|down_4|NZ_CP045030.1_1234603_1235074_-	pfam10612, Spore-coat_CotZ, Spore coat protein Z	NA|689aa|down_5|NZ_CP045030.1_1235216_1237283_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|141aa|down_6|NZ_CP045030.1_1237383_1237806_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|173aa|down_7|NZ_CP045030.1_1237807_1238326_-	PRK13679, PRK13679, hypothetical protein; Provisional	NA|244aa|down_8|NZ_CP045030.1_1238419_1239151_-	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]	NA|304aa|down_9|NZ_CP045030.1_1239355_1240267_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
GCF_009025915.1_ASM902591v1	NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	3	4984198-4984314	3	CRISPRCasFinder	no		cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh	Orphan	CTTAAACAAGCGTTTGATTAATTCTCCATTTTTCTT	36	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh,RT,cas4	NA|115aa|up_4|NZ_CP045030.1_4981327_4981672_-,NA|176aa|down_0|NZ_CP045030.1_4984413_4984941_-,NA|62aa|down_5|NZ_CP045030.1_4988286_4988472_-	NA|262aa|up_9|NZ_CP045030.1_4976492_4977278_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|269aa|up_8|NZ_CP045030.1_4977516_4978323_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|271aa|up_7|NZ_CP045030.1_4978394_4979207_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|222aa|up_6|NZ_CP045030.1_4979230_4979896_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|342aa|up_5|NZ_CP045030.1_4979888_4980914_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|115aa|up_4|NZ_CP045030.1_4981327_4981672_-	NA	NA|100aa|up_3|NZ_CP045030.1_4981824_4982124_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|115aa|up_2|NZ_CP045030.1_4982136_4982481_-	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|128aa|up_1|NZ_CP045030.1_4983211_4983595_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|122aa|up_0|NZ_CP045030.1_4983636_4984002_-	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|176aa|down_0|NZ_CP045030.1_4984413_4984941_-	NA	NA|216aa|down_1|NZ_CP045030.1_4985085_4985733_+	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily	NA|338aa|down_2|NZ_CP045030.1_4985792_4986806_-	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC	NA|390aa|down_3|NZ_CP045030.1_4986828_4987998_-	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	NA|83aa|down_4|NZ_CP045030.1_4988024_4988273_-	pfam07875, Coat_F, Coat F domain	NA|62aa|down_5|NZ_CP045030.1_4988286_4988472_-	NA	NA|240aa|down_6|NZ_CP045030.1_4988585_4989305_-	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain	NA|601aa|down_7|NZ_CP045030.1_4989420_4991223_-	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|391aa|down_8|NZ_CP045030.1_4991593_4992766_-	PRK07661, PRK07661, acetyl-CoA C-acetyltransferase	NA|794aa|down_9|NZ_CP045030.1_4992787_4995169_-	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
GCF_009025915.1_ASM902591v1	NZ_CP045030	Bacillus thuringiensis strain JW-1 chromosome, complete genome	4	5239636-5239769	4	CRISPRCasFinder	no		cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh	Orphan	GTTGATTTCTCTTCTTTTTGAGA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh,RT,cas4	NA|45aa|up_0|NZ_CP045030.1_5239313_5239448_-,NA	NA|220aa|up_9|NZ_CP045030.1_5231315_5231975_-	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase	NA|293aa|up_8|NZ_CP045030.1_5231993_5232872_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|256aa|up_7|NZ_CP045030.1_5233111_5233879_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|234aa|up_6|NZ_CP045030.1_5233990_5234692_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|248aa|up_5|NZ_CP045030.1_5234681_5235425_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]	NA|226aa|up_4|NZ_CP045030.1_5235688_5236366_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|145aa|up_3|NZ_CP045030.1_5236707_5237142_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|334aa|up_2|NZ_CP045030.1_5237570_5238572_-	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional	NA|91aa|up_1|NZ_CP045030.1_5238732_5239005_-	pfam12116, SpoIIID, Stage III sporulation protein D	NA|45aa|up_0|NZ_CP045030.1_5239313_5239448_-	NA	NA|236aa|down_0|NZ_CP045030.1_5240657_5241365_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|281aa|down_1|NZ_CP045030.1_5241364_5242207_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|336aa|down_2|NZ_CP045030.1_5242388_5243396_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|340aa|down_3|NZ_CP045030.1_5243494_5244514_-	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D	NA|435aa|down_4|NZ_CP045030.1_5244722_5246027_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|237aa|down_5|NZ_CP045030.1_5246066_5246777_-	pfam08680, DUF1779, TATA-box binding	NA|79aa|down_6|NZ_CP045030.1_5246822_5247059_-	COG4836, COG4836, Predicted membrane protein [Function unknown]	NA|507aa|down_7|NZ_CP045030.1_5247261_5248782_-	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|501aa|down_8|NZ_CP045030.1_5248783_5250286_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|621aa|down_9|NZ_CP045030.1_5250282_5252145_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed
GCF_009025915.1_ASM902591v1	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	1	132396-132856	1	CRISPRCasFinder	no			Orphan	GATATCATTGAAGACGAAGATGA	23	3	5	132554-132572|132554-132572|132596-132614|132815-132833|132815-132833	NZ_CP045024.1_321934-321952|NZ_CP045030.1_4548305-4548287|NZ_CP045024.1_321934-321952|NZ_CP045030.1_922271-922289|NZ_CP045030.1_275949-275967	NA	9	9	Orphan	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh,RT,cas4	NA|172aa|up_9|NZ_CP045024.1_125604_126120_+,NA|69aa|up_8|NZ_CP045024.1_126132_126339_+,NA|62aa|up_7|NZ_CP045024.1_126325_126511_+,NA|65aa|up_6|NZ_CP045024.1_126713_126908_+,NA|339aa|up_5|NZ_CP045024.1_126939_127956_+,NA|120aa|up_2|NZ_CP045024.1_130007_130367_+,NA|178aa|down_0|NZ_CP045024.1_132987_133521_+,NA|186aa|down_1|NZ_CP045024.1_133636_134194_+,NA|164aa|down_2|NZ_CP045024.1_134197_134689_+,NA|226aa|down_3|NZ_CP045024.1_134706_135384_+,NA|207aa|down_4|NZ_CP045024.1_135406_136027_+,NA|161aa|down_5|NZ_CP045024.1_136050_136533_+,NA|160aa|down_6|NZ_CP045024.1_136555_137035_+,NA|173aa|down_7|NZ_CP045024.1_137335_137854_+,NA|187aa|down_8|NZ_CP045024.1_137855_138416_+,NA|246aa|down_9|NZ_CP045024.1_138458_139196_+	NA|172aa|up_9|NZ_CP045024.1_125604_126120_+	NA	NA|69aa|up_8|NZ_CP045024.1_126132_126339_+	NA	NA|62aa|up_7|NZ_CP045024.1_126325_126511_+	NA	NA|65aa|up_6|NZ_CP045024.1_126713_126908_+	NA	NA|339aa|up_5|NZ_CP045024.1_126939_127956_+	NA	NA|418aa|up_4|NZ_CP045024.1_127943_129197_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|263aa|up_3|NZ_CP045024.1_129203_129992_+	cd17792, CtkA, serine/threonine-protein kinase CtkA and similar proteins	NA|120aa|up_2|NZ_CP045024.1_130007_130367_+	NA	NA|242aa|up_1|NZ_CP045024.1_130397_131123_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|316aa|up_0|NZ_CP045024.1_131221_132169_+	PRK13480, PRK13480, 3'-5' exoribonuclease YhaM; Provisional	NA|178aa|down_0|NZ_CP045024.1_132987_133521_+	NA	NA|186aa|down_1|NZ_CP045024.1_133636_134194_+	NA	NA|164aa|down_2|NZ_CP045024.1_134197_134689_+	NA	NA|226aa|down_3|NZ_CP045024.1_134706_135384_+	NA	NA|207aa|down_4|NZ_CP045024.1_135406_136027_+	NA	NA|161aa|down_5|NZ_CP045024.1_136050_136533_+	NA	NA|160aa|down_6|NZ_CP045024.1_136555_137035_+	NA	NA|173aa|down_7|NZ_CP045024.1_137335_137854_+	NA	NA|187aa|down_8|NZ_CP045024.1_137855_138416_+	NA	NA|246aa|down_9|NZ_CP045024.1_138458_139196_+	NA
GCF_009025915.1_ASM902591v1	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	2	288933-289070	2	CRISPRCasFinder	no			Orphan	CTAAACCTGTACAAAAGCAAGAAG	24	0	0	NA	NA	NA	2	2	Orphan	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh,RT,cas4	NA|137aa|up_9|NZ_CP045024.1_259769_260180_+,NA|194aa|up_3|NZ_CP045024.1_274129_274711_+,NA|139aa|up_2|NZ_CP045024.1_274790_275207_+,NA|133aa|down_1|NZ_CP045024.1_290599_290998_+,NA|204aa|down_2|NZ_CP045024.1_291075_291687_+,NA|247aa|down_3|NZ_CP045024.1_291794_292535_+,NA|139aa|down_4|NZ_CP045024.1_292554_292971_+,NA|127aa|down_5|NZ_CP045024.1_292976_293357_+,NA|120aa|down_6|NZ_CP045024.1_293375_293735_+,NA|237aa|down_7|NZ_CP045024.1_293746_294457_+,NA|86aa|down_8|NZ_CP045024.1_294781_295039_+,NA|108aa|down_9|NZ_CP045024.1_295059_295383_+	NA|137aa|up_9|NZ_CP045024.1_259769_260180_+	NA	NA|396aa|up_8|NZ_CP045024.1_260416_261604_+	smart00475, 53EXOc, 5'-3' exonuclease	NA|423aa|up_7|NZ_CP045024.1_261813_263082_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|2561aa|up_6|NZ_CP045024.1_263721_271404_+	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|471aa|up_5|NZ_CP045024.1_271826_273239_+	COG4990, COG4990, Uncharacterized protein conserved in bacteria [Function unknown]	NA|237aa|up_4|NZ_CP045024.1_273399_274110_+	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|194aa|up_3|NZ_CP045024.1_274129_274711_+	NA	NA|139aa|up_2|NZ_CP045024.1_274790_275207_+	NA	NA|353aa|up_1|NZ_CP045024.1_275459_276518_+	pfam16403, DUF5011, Domain of unknown function (DUF5011)	NA|3527aa|up_0|NZ_CP045024.1_277096_287677_+	TIGR04226, Fimbrial_subunit_type_2, fimbrial isopeptide formation D2 domain	NA|283aa|down_0|NZ_CP045024.1_289584_290433_+	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|133aa|down_1|NZ_CP045024.1_290599_290998_+	NA	NA|204aa|down_2|NZ_CP045024.1_291075_291687_+	NA	NA|247aa|down_3|NZ_CP045024.1_291794_292535_+	NA	NA|139aa|down_4|NZ_CP045024.1_292554_292971_+	NA	NA|127aa|down_5|NZ_CP045024.1_292976_293357_+	NA	NA|120aa|down_6|NZ_CP045024.1_293375_293735_+	NA	NA|237aa|down_7|NZ_CP045024.1_293746_294457_+	NA	NA|86aa|down_8|NZ_CP045024.1_294781_295039_+	NA	NA|108aa|down_9|NZ_CP045024.1_295059_295383_+	NA
GCF_009025915.1_ASM902591v1	NZ_CP045026	Bacillus thuringiensis strain JW-1 plasmid p4, complete sequence	1	8339-8480	1	CRISPRCasFinder	no		csa3	Orphan	AATAGGTACGCAACTTGGGAAAAACGTTGCTT	32	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh,RT,cas4	NA|105aa|up_4|NZ_CP045026.1_2104_2419_+,NA|570aa|up_0|NZ_CP045026.1_6450_8160_-,NA|565aa|down_0|NZ_CP045026.1_8958_10653_+,NA|80aa|down_1|NZ_CP045026.1_11172_11412_+,NA|162aa|down_2|NZ_CP045026.1_11503_11989_+,NA|144aa|down_5|NZ_CP045026.1_15600_16032_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|309aa|up_5|NZ_CP045026.1_1162_2089_+	pfam01978, TrmB, Sugar-specific transcriptional regulator TrmB	NA|105aa|up_4|NZ_CP045026.1_2104_2419_+	NA	NA|236aa|up_3|NZ_CP045026.1_2336_3044_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|236aa|up_2|NZ_CP045026.1_3611_4319_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|53aa|up_1|NZ_CP045026.1_4341_4500_+	pfam00665, rve, Integrase core domain	NA|570aa|up_0|NZ_CP045026.1_6450_8160_-	NA	NA|565aa|down_0|NZ_CP045026.1_8958_10653_+	NA	NA|80aa|down_1|NZ_CP045026.1_11172_11412_+	NA	NA|162aa|down_2|NZ_CP045026.1_11503_11989_+	NA	NA|206aa|down_3|NZ_CP045026.1_14206_14824_+	pfam13814, Replic_Relax, Replication-relaxation	NA|125aa|down_4|NZ_CP045026.1_14971_15346_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|144aa|down_5|NZ_CP045026.1_15600_16032_-	NA	NA|250aa|down_6|NZ_CP045026.1_17371_18121_-	pfam01338, Bac_thur_toxin, Bacillus thuringiensis toxin	NA|180aa|down_7|NZ_CP045026.1_19149_19689_+	pfam07029, CryBP1, CryBP1 protein	NA|644aa|down_8|NZ_CP045026.1_19787_21719_+	pfam03945, Endotoxin_N, delta endotoxin, N-terminal domain	NA|183aa|down_9|NZ_CP045026.1_21999_22548_+	pfam05560, Bt_P21, Bacillus thuringiensis P21 molecular chaperone protein
GCF_009025915.1_ASM902591v1	NZ_CP045026	Bacillus thuringiensis strain JW-1 plasmid p4, complete sequence	2	8599-8714	2	CRISPRCasFinder	no		csa3	Orphan	AATAGGTACGCAACTTGGGAAAAACGTTGCTT	32	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14k,csa3,WYL,c2c9_V-U4,cas14j,DinG,DEDDh,RT,cas4	NA|105aa|up_4|NZ_CP045026.1_2104_2419_+,NA|570aa|up_0|NZ_CP045026.1_6450_8160_-,NA|565aa|down_0|NZ_CP045026.1_8958_10653_+,NA|80aa|down_1|NZ_CP045026.1_11172_11412_+,NA|162aa|down_2|NZ_CP045026.1_11503_11989_+,NA|144aa|down_5|NZ_CP045026.1_15600_16032_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|309aa|up_5|NZ_CP045026.1_1162_2089_+	pfam01978, TrmB, Sugar-specific transcriptional regulator TrmB	NA|105aa|up_4|NZ_CP045026.1_2104_2419_+	NA	NA|236aa|up_3|NZ_CP045026.1_2336_3044_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|236aa|up_2|NZ_CP045026.1_3611_4319_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|53aa|up_1|NZ_CP045026.1_4341_4500_+	pfam00665, rve, Integrase core domain	NA|570aa|up_0|NZ_CP045026.1_6450_8160_-	NA	NA|565aa|down_0|NZ_CP045026.1_8958_10653_+	NA	NA|80aa|down_1|NZ_CP045026.1_11172_11412_+	NA	NA|162aa|down_2|NZ_CP045026.1_11503_11989_+	NA	NA|206aa|down_3|NZ_CP045026.1_14206_14824_+	pfam13814, Replic_Relax, Replication-relaxation	NA|125aa|down_4|NZ_CP045026.1_14971_15346_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|144aa|down_5|NZ_CP045026.1_15600_16032_-	NA	NA|250aa|down_6|NZ_CP045026.1_17371_18121_-	pfam01338, Bac_thur_toxin, Bacillus thuringiensis toxin	NA|180aa|down_7|NZ_CP045026.1_19149_19689_+	pfam07029, CryBP1, CryBP1 protein	NA|644aa|down_8|NZ_CP045026.1_19787_21719_+	pfam03945, Endotoxin_N, delta endotoxin, N-terminal domain	NA|183aa|down_9|NZ_CP045026.1_21999_22548_+	pfam05560, Bt_P21, Bacillus thuringiensis P21 molecular chaperone protein
