assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009363015.1_ASM936301v1	NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	1	145608-145952	1	PILER-CR	no		DEDDh,csa3	Orphan	ATCTTTCACCGGTGAAAG	18	0	0	NA	NA	NA	4	4	Orphan	WYL,csa3,DEDDh,DinG,cas3	NA|118aa|up_8|NZ_CP045223.1_134453_134807_-,NA|138aa|up_7|NZ_CP045223.1_134827_135241_-,NA|474aa|up_6|NZ_CP045223.1_135292_136714_-,NA|114aa|up_5|NZ_CP045223.1_136777_137119_-,NA|114aa|down_0|NZ_CP045223.1_148180_148522_+,NA|399aa|down_2|NZ_CP045223.1_149580_150777_+,NA|244aa|down_3|NZ_CP045223.1_150779_151511_+,NA|592aa|down_4|NZ_CP045223.1_151542_153318_+,NA|143aa|down_7|NZ_CP045223.1_155631_156060_+,NA|192aa|down_8|NZ_CP045223.1_156046_156622_+	NA|269aa|up_9|NZ_CP045223.1_133647_134454_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|118aa|up_8|NZ_CP045223.1_134453_134807_-	NA	NA|138aa|up_7|NZ_CP045223.1_134827_135241_-	NA	NA|474aa|up_6|NZ_CP045223.1_135292_136714_-	NA	NA|114aa|up_5|NZ_CP045223.1_136777_137119_-	NA	NA|92aa|up_4|NZ_CP045223.1_139539_139815_-	pfam13298, LigD_N, DNA polymerase Ligase (LigD)	NA|65aa|up_3|NZ_CP045223.1_139835_140030_-	pfam12244, DUF3606, Protein of unknown function (DUF3606)	NA|482aa|up_2|NZ_CP045223.1_141100_142546_-	pfam01051, Rep_3, Initiator Replication protein	NA|374aa|up_1|NZ_CP045223.1_143541_144663_-	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein	NA|244aa|up_0|NZ_CP045223.1_144663_145395_-	cd02042, ParAB_family, partition proteins ParAB family	NA|114aa|down_0|NZ_CP045223.1_148180_148522_+	NA	NA|227aa|down_1|NZ_CP045223.1_148559_149240_+	COG1896, COG1896, Predicted hydrolases of HD superfamily [General function prediction only]	NA|399aa|down_2|NZ_CP045223.1_149580_150777_+	NA	NA|244aa|down_3|NZ_CP045223.1_150779_151511_+	NA	NA|592aa|down_4|NZ_CP045223.1_151542_153318_+	NA	NA|145aa|down_5|NZ_CP045223.1_153318_153753_-	smart00528, HNS, Domain in histone-like proteins of HNS family	NA|591aa|down_6|NZ_CP045223.1_153784_155557_-	PRK05667, dnaG, DNA primase; Validated	NA|143aa|down_7|NZ_CP045223.1_155631_156060_+	NA	NA|192aa|down_8|NZ_CP045223.1_156046_156622_+	NA	NA|208aa|down_9|NZ_CP045223.1_156618_157242_+	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins
GCF_009363015.1_ASM936301v1	NZ_CP045222	Achromobacter xylosoxidans strain DN002 chromosome, complete genome	1	2726899-2727019	1	CRISPRCasFinder	no		WYL,csa3,DEDDh,DinG,cas3	Orphan	GGGGCAGCTAGCCCGCGTTAGCGGGCGCGGCGTGGGGGC	39	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,DinG,cas3	NA,NA	NA|203aa|up_9|NZ_CP045222.1_2713956_2714565_-	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|726aa|up_8|NZ_CP045222.1_2714620_2716798_-	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|593aa|up_7|NZ_CP045222.1_2716880_2718659_-	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|30aa|up_6|NZ_CP045222.1_2718658_2718748_-	pfam09604, Potass_KdpF, F subunit of K+-transporting ATPase (Potass_KdpF)	NA|93aa|up_5|NZ_CP045222.1_2719487_2719766_+	TIGR03647, Na_symport_sm, putative solute:sodium symporter small subunit	NA|697aa|up_4|NZ_CP045222.1_2719765_2721856_+	TIGR03648, Na_symport_lg, probable sodium:solute symporter, VC_2705 subfamily	NA|110aa|up_3|NZ_CP045222.1_2721890_2722220_-	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|226aa|up_2|NZ_CP045222.1_2722216_2722894_-	COG2840, COG2840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|320aa|up_1|NZ_CP045222.1_2722880_2723840_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|794aa|up_0|NZ_CP045222.1_2723882_2726264_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|491aa|down_0|NZ_CP045222.1_2727460_2728933_-	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics	NA|291aa|down_1|NZ_CP045222.1_2728946_2729819_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|333aa|down_2|NZ_CP045222.1_2729848_2730847_-	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]	NA|336aa|down_3|NZ_CP045222.1_2730843_2731851_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|290aa|down_4|NZ_CP045222.1_2731853_2732723_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|314aa|down_5|NZ_CP045222.1_2732732_2733674_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|520aa|down_6|NZ_CP045222.1_2733767_2735327_-	cd08502, PBP2_NikA_DppA_OppA_like_16, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|423aa|down_7|NZ_CP045222.1_2735439_2736708_-	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase	NA|264aa|down_8|NZ_CP045222.1_2736885_2737677_+	cd07581, nitrilase_3, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|447aa|down_9|NZ_CP045222.1_2737780_2739121_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed
GCF_009363015.1_ASM936301v1	NZ_CP045222	Achromobacter xylosoxidans strain DN002 chromosome, complete genome	2	3817953-3818078	2	CRISPRCasFinder	no		WYL,csa3,DEDDh,DinG,cas3	Orphan	CAACGGGTGTCAGACACCGGCCAGCGAAGCTCC	33	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,DinG,cas3	NA|115aa|up_8|NZ_CP045222.1_3808766_3809111_+,NA|877aa|up_7|NZ_CP045222.1_3809362_3811993_+,NA|263aa|up_5|NZ_CP045222.1_3813908_3814697_+,NA|114aa|up_4|NZ_CP045222.1_3814696_3815038_+,NA|176aa|up_2|NZ_CP045222.1_3815525_3816053_+,NA|73aa|up_1|NZ_CP045222.1_3816049_3816268_-,NA|74aa|down_0|NZ_CP045222.1_3818149_3818371_-	NA|172aa|up_9|NZ_CP045222.1_3808254_3808770_+	pfam08875, DUF1833, Domain of unknown function (DUF1833)	NA|115aa|up_8|NZ_CP045222.1_3808766_3809111_+	NA	NA|877aa|up_7|NZ_CP045222.1_3809362_3811993_+	NA	NA|617aa|up_6|NZ_CP045222.1_3812048_3813899_+	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein	NA|263aa|up_5|NZ_CP045222.1_3813908_3814697_+	NA	NA|114aa|up_4|NZ_CP045222.1_3814696_3815038_+	NA	NA|165aa|up_3|NZ_CP045222.1_3815034_3815529_+	COG3926, zliS, Lysozyme family protein [General function prediction only]	NA|176aa|up_2|NZ_CP045222.1_3815525_3816053_+	NA	NA|73aa|up_1|NZ_CP045222.1_3816049_3816268_-	NA	NA|419aa|up_0|NZ_CP045222.1_3816279_3817536_-	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|74aa|down_0|NZ_CP045222.1_3818149_3818371_-	NA	NA|261aa|down_1|NZ_CP045222.1_3818457_3819240_-	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|268aa|down_2|NZ_CP045222.1_3819258_3820062_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|478aa|down_3|NZ_CP045222.1_3820359_3821793_+	cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like	NA|235aa|down_4|NZ_CP045222.1_3821894_3822599_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|499aa|down_5|NZ_CP045222.1_3822671_3824168_-	COG5476, COG5476, Uncharacterized conserved protein [Function unknown]	NA|195aa|down_6|NZ_CP045222.1_3824351_3824936_+	PRK15130, PRK15130, spermidine N1-acetyltransferase; Provisional	NA|106aa|down_7|NZ_CP045222.1_3824957_3825275_-	pfam07978, NIPSNAP, NIPSNAP	NA|330aa|down_8|NZ_CP045222.1_3825307_3826297_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|562aa|down_9|NZ_CP045222.1_3826347_3828033_-	PRK08199, PRK08199, thiamine pyrophosphate protein; Validated
GCF_009363015.1_ASM936301v1	NZ_CP045222	Achromobacter xylosoxidans strain DN002 chromosome, complete genome	3	5901930-5902034	3	CRISPRCasFinder	no		WYL,csa3,DEDDh,DinG,cas3	Orphan	GGCTCGCTTCGCTTTGCCTTGCTT	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,DinG,cas3	NA|211aa|up_8|NZ_CP045222.1_5892755_5893388_+,NA	NA|122aa|up_9|NZ_CP045222.1_5892379_5892745_+	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains	NA|211aa|up_8|NZ_CP045222.1_5892755_5893388_+	NA	NA|192aa|up_7|NZ_CP045222.1_5893438_5894014_+	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria	NA|265aa|up_6|NZ_CP045222.1_5894039_5894834_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|270aa|up_5|NZ_CP045222.1_5894837_5895647_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|347aa|up_4|NZ_CP045222.1_5895639_5896680_-	cd13649, PBP2_Cae31940, Substrate binding domain of an uncharacterized protein similar to ABC-type transporter for thiamin biosynthetic pathway intermediates; a member of the type 2 periplasmic binding fold superfamily	NA|425aa|up_3|NZ_CP045222.1_5896676_5897951_-	pfam02515, CoA_transf_3, CoA-transferase family III	NA|203aa|up_2|NZ_CP045222.1_5898018_5898627_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|109aa|up_1|NZ_CP045222.1_5898648_5898975_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|841aa|up_0|NZ_CP045222.1_5899017_5901540_-	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|1152aa|down_0|NZ_CP045222.1_5902171_5905627_-	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|888aa|down_1|NZ_CP045222.1_5905629_5908293_-	TIGR03623, TIGR03623, probable DNA repair protein	NA|402aa|down_2|NZ_CP045222.1_5908604_5909810_-	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|266aa|down_3|NZ_CP045222.1_5910938_5911736_+	PRK11669, pbpG, D-alanyl-D-alanine endopeptidase; Provisional	NA|129aa|down_4|NZ_CP045222.1_5911814_5912201_-	COG4321, COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis [General function prediction only]	NA|342aa|down_5|NZ_CP045222.1_5912398_5913424_+	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|193aa|down_6|NZ_CP045222.1_5913522_5914101_-	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|163aa|down_7|NZ_CP045222.1_5914226_5914715_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|328aa|down_8|NZ_CP045222.1_5914751_5915735_-	PRK00283, xerD, tyrosine recombinase	NA|309aa|down_9|NZ_CP045222.1_5915744_5916671_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional
