assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009618015.1_ASM961801v1	NZ_AP019856	Escherichia coli O8:H8 strain 16F5M1D1	1	44130-44261	1	PILER-CR	no		DEDDh,DinG,cas3,c2c9_V-U4,csa3	Orphan	ACATTTTCAATATTGGTGAT	20	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,csa3	NA,NA	NA|274aa|up_9|NZ_AP019856.1_30320_31142_+	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|383aa|up_8|NZ_AP019856.1_31597_32746_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|1074aa|up_7|NZ_AP019856.1_32763_35985_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|132aa|up_6|NZ_AP019856.1_36246_36642_+	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|197aa|up_5|NZ_AP019856.1_36727_37318_-	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|262aa|up_4|NZ_AP019856.1_37323_38109_-	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|518aa|up_3|NZ_AP019856.1_38217_39771_-	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|406aa|up_2|NZ_AP019856.1_39844_41062_-	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|381aa|up_1|NZ_AP019856.1_41190_42333_-	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|505aa|up_0|NZ_AP019856.1_42363_43878_-	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|257aa|down_0|NZ_AP019856.1_44351_45122_+	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|314aa|down_1|NZ_AP019856.1_45136_46078_+	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|429aa|down_2|NZ_AP019856.1_46128_47415_+	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|96aa|down_3|NZ_AP019856.1_47411_47699_+	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|444aa|down_4|NZ_AP019856.1_47757_49089_+	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|177aa|down_5|NZ_AP019856.1_49196_49727_+	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|621aa|down_6|NZ_AP019856.1_49719_51582_+	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|160aa|down_7|NZ_AP019856.1_51773_52253_+	PRK10769, folA, type 3 dihydrofolate reductase	NA|281aa|down_8|NZ_AP019856.1_52330_53173_-	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|126aa|down_9|NZ_AP019856.1_53179_53557_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed
GCF_009618015.1_ASM961801v1	NZ_AP019856	Escherichia coli O8:H8 strain 16F5M1D1	2	2154163-2154297	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,csa3	Orphan	GGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACG	47	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,csa3	NA,NA	NA|339aa|up_9|NZ_AP019856.1_2140611_2141628_-	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins	NA|340aa|up_8|NZ_AP019856.1_2141646_2142666_-	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|298aa|up_7|NZ_AP019856.1_2142974_2143868_-	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF	NA|332aa|up_6|NZ_AP019856.1_2144099_2145095_-	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs	NA|465aa|up_5|NZ_AP019856.1_2145252_2146647_-	PRK10123, wcaM, putative colanic acid biosynthesis protein; Provisional	NA|407aa|up_4|NZ_AP019856.1_2146657_2147878_-	TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL	NA|427aa|up_3|NZ_AP019856.1_2147874_2149155_-	TIGR04006, wcaK, colanic acid biosynthesis pyruvyl transferase WcaK	NA|493aa|up_2|NZ_AP019856.1_2149718_2151197_-	PRK10459, PRK10459, MOP flippase family protein	NA|465aa|up_1|NZ_AP019856.1_2151198_2152593_-	PRK10124, PRK10124, putative UDP-glucose lipid carrier transferase; Provisional	NA|457aa|up_0|NZ_AP019856.1_2152647_2154018_-	PRK15414, PRK15414, phosphomannomutase	NA|479aa|down_0|NZ_AP019856.1_2154298_2155735_-	PRK15460, cpsB, mannose-1-phosphate guanyltransferase; Provisional	NA|408aa|down_1|NZ_AP019856.1_2155737_2156961_-	TIGR04007, wcaI, colanic acid biosynthesis glycosyl transferase WcaI	NA|160aa|down_2|NZ_AP019856.1_2156957_2157437_-	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase	NA|322aa|down_3|NZ_AP019856.1_2157439_2158405_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|374aa|down_4|NZ_AP019856.1_2158407_2159529_-	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|183aa|down_5|NZ_AP019856.1_2159554_2160103_-	TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF	NA|249aa|down_6|NZ_AP019856.1_2160118_2160865_-	PRK10063, PRK10063, colanic acid biosynthesis glycosyltransferase WcaE	NA|406aa|down_7|NZ_AP019856.1_2160875_2162093_-	TIGR04010, WcaD, putative colanic acid polymerase WcaD	NA|406aa|down_8|NZ_AP019856.1_2162067_2163285_-	TIGR04015, WcaC, colanic acid biosynthesis glycosyl transferase WcaC	NA|163aa|down_9|NZ_AP019856.1_2163281_2163770_-	PRK10191, PRK10191, putative acyl transferase; Provisional
GCF_009618015.1_ASM961801v1	NZ_AP019856	Escherichia coli O8:H8 strain 16F5M1D1	3	2945446-2946267	1,2,2	CRT,PILER-CR,CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,csa3	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	13,12,12	13	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,csa3	NA,NA|88aa|down_5|NZ_AP019856.1_2954283_2954547_-	NA|254aa|up_9|NZ_AP019856.1_2937319_2938081_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_AP019856.1_2938061_2939111_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_AP019856.1_2939107_2939587_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_AP019856.1_2939586_2940297_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_AP019856.1_2940315_2940627_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_AP019856.1_2940820_2941144_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_AP019856.1_2941193_2941799_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_AP019856.1_2941798_2943226_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_AP019856.1_2943227_2944136_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_AP019856.1_2944387_2945425_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|51aa|down_0|NZ_AP019856.1_2948506_2948659_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_1|NZ_AP019856.1_2948923_2949658_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_2|NZ_AP019856.1_2949731_2951444_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|down_3|NZ_AP019856.1_2951443_2953243_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|down_4|NZ_AP019856.1_2953561_2953924_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|88aa|down_5|NZ_AP019856.1_2954283_2954547_-	NA	NA|224aa|down_6|NZ_AP019856.1_2955285_2955957_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|291aa|down_7|NZ_AP019856.1_2956250_2957123_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_8|NZ_AP019856.1_2957182_2958481_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_9|NZ_AP019856.1_2958568_2960206_-	PRK05380, pyrG, CTP synthetase; Validated
GCF_009618015.1_ASM961801v1	NZ_AP019856	Escherichia coli O8:H8 strain 16F5M1D1	4	2954613-2954946	3,2,3	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,DinG,cas3,c2c9_V-U4,csa3	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,18,29	0	0	NA	NA	I-E:NA:I-E	5,5,4	5	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,csa3	NA|88aa|up_0|NZ_AP019856.1_2954283_2954547_-,NA	NA|202aa|up_9|NZ_AP019856.1_2941193_2941799_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_8|NZ_AP019856.1_2941798_2943226_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_7|NZ_AP019856.1_2943227_2944136_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_6|NZ_AP019856.1_2944387_2945425_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|51aa|up_5|NZ_AP019856.1_2948506_2948659_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|up_4|NZ_AP019856.1_2948923_2949658_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_3|NZ_AP019856.1_2949731_2951444_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_2|NZ_AP019856.1_2951443_2953243_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|up_1|NZ_AP019856.1_2953561_2953924_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|88aa|up_0|NZ_AP019856.1_2954283_2954547_-	NA	NA|224aa|down_0|NZ_AP019856.1_2955285_2955957_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|291aa|down_1|NZ_AP019856.1_2956250_2957123_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_2|NZ_AP019856.1_2957182_2958481_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NZ_AP019856.1_2958568_2960206_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NZ_AP019856.1_2960433_2961225_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|NZ_AP019856.1_2961295_2961631_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|NZ_AP019856.1_2961630_2961879_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|NZ_AP019856.1_2961956_2964191_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NZ_AP019856.1_2964238_2965540_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NZ_AP019856.1_2965596_2968353_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
