The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045782	Klebsiella pneumoniae strain LEMB18 chromosome, complete genome	5220569	16677	84596	5220569	tRNA,terminase,plate,capsid,tail,integrase,portal,head	Enterobacteria_phage(51.43%)	80	43860:43877	79333:79350
WP_102001278.1|16677_17784_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_004150802.1|17840_18299_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_004150801.1|18315_18966_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_004150800.1|19206_20457_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
WP_065518563.1|20729_21443_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA	NA
WP_004150798.1|21439_21832_-	amino acid-binding protein	NA	NA	NA	NA	NA
WP_040235838.1|21824_22148_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_004140530.1|22584_22812_-	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
WP_004140529.1|22924_24118_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_004148025.1|24185_24521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150795.1|24740_24926_+	general stress protein	NA	NA	NA	NA	NA
WP_004148027.1|25016_25511_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004140514.1|25537_26044_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004140512.1|26060_26948_+	manganese catalase family protein	NA	NA	NA	NA	NA
WP_004140511.1|27003_28410_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004140509.1|28406_29417_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_004140506.1|29532_29730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150791.1|30296_30929_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_153244925.1|30907_31096_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150790.1|31545_32232_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004140497.1|32542_34051_-	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_004150788.1|34171_35062_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_029602490.1|35068_36853_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	38.5	2.6e-17
WP_004140494.1|36926_38135_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_004892909.1|38437_39481_+	type II asparaginase	NA	NA	NA	NA	NA
WP_004148038.1|40142_41057_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
WP_004150783.1|41146_41785_+	leucine efflux protein LeuE	NA	NA	NA	NA	NA
WP_004140489.1|41915_42179_+	DUF2534 family protein	NA	NA	NA	NA	NA
WP_004140488.1|42238_42364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213093.1|42481_42556_-	protein YoaJ	NA	NA	NA	NA	NA
WP_004150782.1|42555_42657_-	YoaK family small membrane protein	NA	NA	NA	NA	NA
WP_004176549.1|42714_43728_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.9e-12
43860:43877	attL	AAAAAAAGCCCCGTCGGG	NA	NA	NA	NA
WP_004213094.1|43993_44977_-|integrase	tyrosine-type recombinase/integrase	integrase	Q83VS6	Escherichia_phage	79.8	2.4e-150
WP_004213095.1|45092_45392_-	helix-turn-helix transcriptional regulator	NA	Q1JS61	Enterobacteria_phage	77.8	6.5e-38
WP_004131514.1|45512_45791_+	hypothetical protein	NA	Q1JS60	Enterobacteria_phage	88.8	5.3e-42
WP_004131515.1|45811_46030_+	hypothetical protein	NA	A0A0M5M1I3	Salmonella_phage	49.1	4.7e-06
WP_032432798.1|46045_46423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004213097.1|46438_46711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004213098.1|46779_47004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032444258.1|47000_47567_+	3'-5' exoribonuclease	NA	D4HTX2	Vibrio_phage	33.2	1.6e-13
WP_102001270.1|47799_48756_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A0M4QWR0	Salmonella_phage	52.9	1.0e-84
WP_102001269.1|48773_51401_+	replication endonuclease	NA	A0A0M4RTM8	Salmonella_phage	50.0	2.5e-189
WP_032442256.1|51397_51907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032442255.1|52121_53087_-	DUF2806 domain-containing protein	NA	NA	NA	NA	NA
WP_102001268.1|53522_54584_-|portal	phage portal protein	portal	A0A0A7NPT9	Enterobacteria_phage	68.1	6.3e-144
WP_023287464.1|54577_56305_-	helix-turn-helix domain-containing protein	NA	A0A0A7NV54	Enterobacteria_phage	68.3	1.8e-233
WP_004215891.1|56461_57301_+|capsid	GPO family capsid scaffolding protein	capsid	A0A0A7NRY7	Enterobacteria_phage	66.3	1.9e-95
WP_004213107.1|57310_58345_+|capsid	phage major capsid protein, P2 family	capsid	A0A0M3ULA3	Salmonella_phage	50.0	6.2e-96
WP_102001267.1|58394_59252_+|terminase	terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	58.6	5.7e-71
WP_004213109.1|59364_59880_+|head	head completion/stabilization protein	head	A0A0A7NPU2	Enterobacteria_phage	49.4	4.1e-40
WP_004131559.1|59879_60080_+|tail	tail protein	tail	A0A0A7NV57	Enterobacteria_phage	63.1	1.6e-16
WP_004215823.1|60070_60355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004213111.1|60351_60897_+	lysozyme	NA	Q1I0Z1	Pasteurella_virus	44.1	1.3e-31
WP_004213112.1|60908_61238_+	DUF2570 domain-containing protein	NA	NA	NA	NA	NA
WP_023287467.1|61419_61887_+|tail	phage tail protein	tail	A0A0A7NPU6	Enterobacteria_phage	59.5	5.4e-47
WP_102001266.1|61883_62519_+	phage virion morphogenesis protein	NA	A0A0A7NV60	Enterobacteria_phage	51.9	2.3e-56
WP_102001265.1|62515_63103_+|plate	phage baseplate assembly protein V	plate	A0A0A7NRZ3	Enterobacteria_phage	60.0	4.1e-60
WP_004215831.1|63099_63450_+	GPW/gp25 family protein	NA	A0A0A7NQ90	Enterobacteria_phage	55.7	2.1e-27
WP_004213117.1|63451_64375_+|plate	baseplate assembly protein J	plate	A0A0A7NPY5	Enterobacteria_phage	43.9	9.9e-53
WP_102001264.1|64364_67391_+|tail	phage tail protein I	tail	D5LGZ2	Escherichia_phage	40.7	6.4e-24
WP_009486478.1|67387_67600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082225713.1|67599_68697_+|tail	phage tail protein	tail	G4KKN6	Yersinia_phage	74.4	1.8e-08
WP_082225714.1|68775_69615_-	hypothetical protein	NA	NA	NA	NA	NA
WP_102001262.1|69616_71860_-	AAA family ATPase	NA	Q7Y4B3	Escherichia_virus	24.9	1.0e-10
WP_153676837.1|71969_72461_-|tail	phage tail protein	tail	A0A0A7NV65	Enterobacteria_phage	58.8	4.9e-51
WP_102001261.1|72476_75452_-|tail	phage tail tape measure protein	tail	A0A0A7NRZ9	Enterobacteria_phage	46.3	3.7e-218
WP_071993210.1|75438_75576_-|tail	GpE family phage tail protein	tail	A0A0A7NQ96	Enterobacteria_phage	65.9	5.8e-10
WP_082225718.1|75596_75914_-|tail	phage tail protein	tail	B9A7B2	Serratia_phage	55.9	4.6e-18
WP_023287479.1|75960_76476_-|tail	phage major tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	61.2	3.7e-57
WP_082225719.1|76475_77648_-|tail	phage tail sheath family protein	tail	A0A0A7NV69	Enterobacteria_phage	69.7	1.6e-156
WP_075648433.1|77802_78942_+	phage late control D family protein	NA	B9A7A9	Serratia_phage	70.7	7.2e-146
WP_004213128.1|78985_79237_+	ogr/Delta-like zinc finger family protein	NA	A0A2I8TV89	Erwinia_phage	49.2	3.4e-08
WP_004179368.1|79502_79742_+	DUF333 domain-containing protein	NA	NA	NA	NA	NA
79333:79350	attR	AAAAAAAGCCCCGTCGGG	NA	NA	NA	NA
WP_004150779.1|79731_80088_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
WP_004176547.1|80074_80584_-	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_004140471.1|80729_81422_+	CTP synthase	NA	NA	NA	NA	NA
WP_153676838.1|81453_82638_-	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_102001277.1|82739_83549_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002901080.1|83532_83979_-	DUF441 domain-containing protein	NA	NA	NA	NA	NA
WP_004892876.1|84095_84596_-|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP045782	Klebsiella pneumoniae strain LEMB18 chromosome, complete genome	5220569	197552	212439	5220569	integrase	Salmonella_phage(40.0%)	21	198336:198348	204872:204884
WP_004140269.1|197552_198362_-	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
198336:198348	attL	GCGAACTTCCAGC	NA	NA	NA	NA
WP_004140266.1|198363_199356_-	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
WP_004151901.1|199355_200246_-	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
WP_094354552.1|200422_201610_+|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	52.2	3.2e-120
WP_004892750.1|201830_202070_-	DUF4060 family protein	NA	M9P0E0	Enterobacteria_phage	70.1	8.0e-23
WP_032445491.1|202077_202386_-	hypothetical protein	NA	I6PD68	Cronobacter_phage	55.9	7.1e-24
WP_153676840.1|202382_202994_-	DUF550 domain-containing protein	NA	S4TSR6	Salmonella_phage	76.3	4.1e-39
WP_032445496.1|202986_203331_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023286270.1|203365_204454_-	recombinase RecT	NA	H6WRX0	Salmonella_phage	56.2	3.7e-107
WP_153676841.1|204466_207505_-	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	57.2	2.6e-291
204872:204884	attR	GCGAACTTCCAGC	NA	NA	NA	NA
WP_153676842.1|207642_207798_-	hypothetical protein	NA	K7PGY4	Enterobacteria_phage	74.0	2.6e-14
WP_020804303.1|207806_207998_-	YebW family protein	NA	NA	NA	NA	NA
WP_022631176.1|208104_208203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153591391.1|208291_208522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049124969.1|208780_209203_-	transcriptional regulator	NA	A0A0H5BBV1	Pseudomonas_phage	53.5	3.2e-06
WP_023301223.1|209305_209536_+	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	42.7	4.0e-11
WP_023320776.1|209538_210075_+	bacteriophage regulatory protein CII	NA	M9NZI6	Enterobacteria_phage	68.3	2.4e-59
WP_153676843.1|210085_210349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004215886.1|210426_211347_+	hypothetical protein	NA	K7PGZ0	Enterobacteria_phage	61.3	1.7e-92
WP_004215885.1|211343_212087_+	replication protein P	NA	A0A0M3ULE2	Salmonella_phage	55.2	3.1e-65
WP_153676844.1|212079_212439_+	DUF977 family protein	NA	H6WRX9	Salmonella_phage	43.0	4.7e-11
>prophage 3
NZ_CP045782	Klebsiella pneumoniae strain LEMB18 chromosome, complete genome	5220569	218099	245861	5220569	holin,terminase,tail	Klebsiella_phage(20.0%)	36	NA	NA
WP_004184503.1|218099_218333_+	DinI-like family protein	NA	K7PM44	Enterobacteria_phage	68.8	2.9e-25
WP_153676849.1|218442_218664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153676850.1|218744_219344_+	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	79.9	1.7e-90
WP_032418472.1|219552_219849_+	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	71.9	4.6e-36
WP_023282412.1|219845_220202_+	RusA family crossover junction endodeoxyribonuclease	NA	K7P6W0	Enterobacteria_phage	64.1	1.5e-41
WP_023282413.1|220317_221139_+	antitermination protein	NA	K7PKS8	Enterobacteria_phage	67.1	4.0e-98
WP_001294159.1|221832_222219_+	membrane protein	NA	A0A192Y8P2	Salmonella_phage	90.6	1.6e-57
WP_071603196.1|222205_222487_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	47.3	2.4e-18
WP_023282414.1|222486_223116_+	glycoside hydrolase family 19 protein	NA	F1C591	Cronobacter_phage	74.4	9.3e-87
WP_153676851.1|223118_223394_+	hypothetical protein	NA	G8C7W1	Escherichia_phage	40.4	3.8e-08
WP_016831932.1|223577_223778_+	hypothetical protein	NA	A0A1L6Z528	Klebsiella_phage	73.3	5.9e-19
WP_016831934.1|224518_224740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016831935.1|225024_225270_+	DUF2560 family protein	NA	A0A286N2R1	Klebsiella_phage	95.1	6.7e-33
WP_135715651.1|225618_226614_+|terminase	terminase small subunit	terminase	Q5QF76	Pseudomonas_virus	45.5	1.1e-38
WP_016946682.1|226597_227911_+|terminase	terminase	terminase	A0A0S2SYF1	Pseudomonas_phage	73.6	2.2e-183
WP_153676852.1|227912_229313_+	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	53.7	1.9e-127
WP_153676853.1|229296_230409_+	hypothetical protein	NA	I6PD76	Cronobacter_phage	55.2	5.3e-109
WP_016946679.1|230493_231279_+	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	63.9	1.0e-66
WP_102962071.1|231289_232243_+	Ig domain-containing protein	NA	A0A1B0VMF8	Pseudomonas_phage	74.4	6.5e-132
WP_023300922.1|232564_232960_+	hypothetical protein	NA	A0A0S2SYB7	Pseudomonas_phage	43.3	3.3e-13
WP_004190649.1|232961_233216_+	hypothetical protein	NA	J9Q7U0	Salmonella_phage	52.4	8.0e-21
WP_072032792.1|233225_233459_+	hypothetical protein	NA	A0A2H4J0Y9	uncultured_Caudovirales_phage	45.6	3.8e-09
WP_004217344.1|233445_233829_+	hypothetical protein	NA	A0A0S2SYG4	Pseudomonas_phage	45.2	7.1e-21
WP_047694613.1|233830_234382_+	hypothetical protein	NA	G8C7Q1	Escherichia_phage	39.3	3.9e-28
WP_004190640.1|234378_234771_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_087783577.1|234794_235967_+	Ig domain-containing protein	NA	A0A0D4DBN5	Acinetobacter_phage	27.0	9.4e-24
WP_004190637.1|236020_236503_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016831940.1|236640_236847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004217333.1|236923_237280_+	hypothetical protein	NA	A0A1V0E5P9	Salmonella_phage	75.0	1.1e-44
WP_077255553.1|237276_237759_+	zinc ribbon domain-containing protein	NA	I6PDJ9	Cronobacter_phage	43.6	1.1e-18
WP_153676854.1|237832_240730_+|tail	phage tail protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	32.7	2.3e-103
WP_015958316.1|240813_241149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047694619.1|241463_241937_+	hypothetical protein	NA	A0A286S298	Klebsiella_phage	68.6	1.9e-60
WP_032433045.1|241923_242406_+	DUF1833 domain-containing protein	NA	A0A286S2B1	Klebsiella_phage	97.5	4.3e-84
WP_017880229.1|242415_242796_+	hypothetical protein	NA	A0A286S2A6	Klebsiella_phage	100.0	4.6e-73
WP_153676855.1|242792_245861_+	kinase	NA	A0A286S259	Klebsiella_phage	98.0	0.0e+00
>prophage 4
NZ_CP045782	Klebsiella pneumoniae strain LEMB18 chromosome, complete genome	5220569	526389	537276	5220569		Escherichia_phage(87.5%)	9	NA	NA
WP_060589161.1|526389_527010_-	aldolase	NA	A0A077SK32	Escherichia_phage	99.5	2.3e-114
WP_004224682.1|527002_528268_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.8	7.8e-234
WP_002903955.1|528279_529182_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
WP_002210513.1|529442_530204_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_004176269.1|530224_531085_-	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_004176262.1|531382_531643_+	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
WP_001620097.1|531729_532818_+	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
WP_004176258.1|532848_534114_-	MFS transporter	NA	NA	NA	NA	NA
WP_004190234.1|534168_537276_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.5	0.0e+00
>prophage 5
NZ_CP045782	Klebsiella pneumoniae strain LEMB18 chromosome, complete genome	5220569	1494782	1501687	5220569	tRNA	Bacillus_phage(33.33%)	6	NA	NA
WP_064278091.1|1494782_1496261_+	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	1.4e-29
WP_004175198.1|1496257_1496980_+	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
WP_004144192.1|1497298_1498660_+|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.8	1.8e-207
WP_002912636.1|1498905_1499799_+	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_004180550.1|1500039_1500813_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
WP_004175147.1|1500823_1501687_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
>prophage 6
NZ_CP045782	Klebsiella pneumoniae strain LEMB18 chromosome, complete genome	5220569	4990931	5000394	5220569	tRNA,protease	Dickeya_phage(16.67%)	8	NA	NA
WP_002896440.1|4990931_4992047_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
WP_102000964.1|4992043_4993984_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.0	5.0e-38
WP_002896516.1|4994060_4994282_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_002896520.1|4994607_4994925_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896522.1|4994955_4997235_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
WP_001040187.1|4997354_4997573_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002898014.1|4997926_4998628_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_004191145.1|4998672_5000394_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.2e-14
