assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009650335.1_ASM965033v1	NZ_CP033249	Clostridium butyricum strain CFSA3989 chromosome, complete genome	1	309769-309916	1	CRISPRCasFinder	no		csx1,cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	TTTTTTTTAAGGAAACTCGACTCACATACGTTCGCTGAGTAAGTTC	46	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA|48aa|up_0|NZ_CP033249.1_309545_309689_+,NA|176aa|down_2|NZ_CP033249.1_314862_315390_+,NA|93aa|down_3|NZ_CP033249.1_316047_316326_+	NA|334aa|up_9|NZ_CP033249.1_295997_296999_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|558aa|up_8|NZ_CP033249.1_297264_298938_+	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	NA|552aa|up_7|NZ_CP033249.1_299064_300720_+	TIGR02003, PTS_system_glucose-specific_IIBC_component, PTS system, IIBC component	NA|266aa|up_6|NZ_CP033249.1_300725_301523_+	cd09079, RgfB-like, Streptococcus agalactiae RgfB, part of a putative two component signal transduction system, and related proteins	NA|162aa|up_5|NZ_CP033249.1_301581_302067_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|417aa|up_4|NZ_CP033249.1_302390_303641_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1068aa|up_3|NZ_CP033249.1_303645_306849_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|440aa|up_2|NZ_CP033249.1_306983_308303_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|344aa|up_1|NZ_CP033249.1_308433_309465_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|48aa|up_0|NZ_CP033249.1_309545_309689_+	NA	NA|609aa|down_0|NZ_CP033249.1_310237_312064_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|210aa|down_1|NZ_CP033249.1_314216_314846_+	pfam13151, DUF3990, Protein of unknown function (DUF3990)	NA|176aa|down_2|NZ_CP033249.1_314862_315390_+	NA	NA|93aa|down_3|NZ_CP033249.1_316047_316326_+	NA	NA|117aa|down_4|NZ_CP033249.1_316318_316669_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|235aa|down_5|NZ_CP033249.1_316771_317476_+	pfam13005, zf-IS66, zinc-finger binding domain of transposase IS66	NA|72aa|down_6|NZ_CP033249.1_317518_317734_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|45aa|down_7|NZ_CP033249.1_317770_317905_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|251aa|down_8|NZ_CP033249.1_318818_319571_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|104aa|down_9|NZ_CP033249.1_321406_321718_+	COG1447, CelC, Phosphotransferase system cellobiose-specific component IIA [Carbohydrate transport and metabolism]
GCF_009650335.1_ASM965033v1	NZ_CP033249	Clostridium butyricum strain CFSA3989 chromosome, complete genome	2	315579-315717	1	PILER-CR	no		csx1,cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	TTTTGATTAAACTTTATT	18	0	0	NA	NA	NA	2	2	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA|48aa|up_3|NZ_CP033249.1_309545_309689_+,NA|176aa|up_0|NZ_CP033249.1_314862_315390_+,NA|93aa|down_0|NZ_CP033249.1_316047_316326_+	NA|266aa|up_9|NZ_CP033249.1_300725_301523_+	cd09079, RgfB-like, Streptococcus agalactiae RgfB, part of a putative two component signal transduction system, and related proteins	NA|162aa|up_8|NZ_CP033249.1_301581_302067_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|417aa|up_7|NZ_CP033249.1_302390_303641_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1068aa|up_6|NZ_CP033249.1_303645_306849_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|440aa|up_5|NZ_CP033249.1_306983_308303_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|344aa|up_4|NZ_CP033249.1_308433_309465_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|48aa|up_3|NZ_CP033249.1_309545_309689_+	NA	NA|609aa|up_2|NZ_CP033249.1_310237_312064_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|210aa|up_1|NZ_CP033249.1_314216_314846_+	pfam13151, DUF3990, Protein of unknown function (DUF3990)	NA|176aa|up_0|NZ_CP033249.1_314862_315390_+	NA	NA|93aa|down_0|NZ_CP033249.1_316047_316326_+	NA	NA|117aa|down_1|NZ_CP033249.1_316318_316669_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|235aa|down_2|NZ_CP033249.1_316771_317476_+	pfam13005, zf-IS66, zinc-finger binding domain of transposase IS66	NA|72aa|down_3|NZ_CP033249.1_317518_317734_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|45aa|down_4|NZ_CP033249.1_317770_317905_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|251aa|down_5|NZ_CP033249.1_318818_319571_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|104aa|down_6|NZ_CP033249.1_321406_321718_+	COG1447, CelC, Phosphotransferase system cellobiose-specific component IIA [Carbohydrate transport and metabolism]	NA|385aa|down_7|NZ_CP033249.1_322093_323248_+	cd15482, Sialidase_non-viral, Non-viral sialidases	NA|80aa|down_8|NZ_CP033249.1_323605_323845_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|53aa|down_9|NZ_CP033249.1_323861_324020_+	pfam04986, Y2_Tnp, Putative transposase
GCF_009650335.1_ASM965033v1	NZ_CP033249	Clostridium butyricum strain CFSA3989 chromosome, complete genome	3	2119714-2119797	2	CRISPRCasFinder	no		csx1,cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	TCCATATTCATTTAGATAATACCA	24	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA,NA	NA|350aa|up_9|NZ_CP033249.1_2107460_2108510_-	cd05657, M42_glucanase_like, M42 Peptidase, endoglucanase-like subfamily	NA|511aa|up_8|NZ_CP033249.1_2108699_2110232_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|351aa|up_7|NZ_CP033249.1_2110384_2111437_-	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional	NA|556aa|up_6|NZ_CP033249.1_2111539_2113207_-	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated	NA|204aa|up_5|NZ_CP033249.1_2113583_2114195_+	COG1971, COG1971, Predicted membrane protein [Function unknown]	NA|307aa|up_4|NZ_CP033249.1_2114355_2115276_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|309aa|up_3|NZ_CP033249.1_2115320_2116247_-	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|166aa|up_2|NZ_CP033249.1_2116384_2116882_-	COG1329, COG1329, Transcriptional regulators, similar to M	NA|201aa|up_1|NZ_CP033249.1_2117145_2117748_+	smart00257, LysM, Lysin motif	NA|466aa|up_0|NZ_CP033249.1_2117811_2119209_-	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|457aa|down_0|NZ_CP033249.1_2120519_2121890_+	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3	NA|1076aa|down_1|NZ_CP033249.1_2121959_2125187_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|679aa|down_2|NZ_CP033249.1_2125506_2127543_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|88aa|down_3|NZ_CP033249.1_2127703_2127967_-	pfam10719, ComFB, Late competence development protein ComFB	NA|439aa|down_4|NZ_CP033249.1_2128122_2129439_-	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional	NA|299aa|down_5|NZ_CP033249.1_2129527_2130424_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|239aa|down_6|NZ_CP033249.1_2130592_2131309_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|483aa|down_7|NZ_CP033249.1_2131484_2132933_-	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|460aa|down_8|NZ_CP033249.1_2132922_2134302_-	PRK09496, trkA, Trk system potassium transporter TrkA	NA|195aa|down_9|NZ_CP033249.1_2134573_2135158_+	COG2112, COG2112, Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
GCF_009650335.1_ASM965033v1	NZ_CP033249	Clostridium butyricum strain CFSA3989 chromosome, complete genome	4	3320856-3320941	3	CRISPRCasFinder	no		csx1,cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	TCTTTCCCAAGATAATATTTAAA	23	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA|1047aa|up_7|NZ_CP033249.1_3309260_3312401_-,NA|112aa|up_2|NZ_CP033249.1_3317815_3318151_-,NA|132aa|up_1|NZ_CP033249.1_3318152_3318548_-,NA|109aa|down_6|NZ_CP033249.1_3327593_3327920_-	NA|338aa|up_9|NZ_CP033249.1_3306634_3307648_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|448aa|up_8|NZ_CP033249.1_3307899_3309243_-	pfam02055, Glyco_hydro_30, Glycosyl hydrolase family 30 TIM-barrel domain	NA|1047aa|up_7|NZ_CP033249.1_3309260_3312401_-	NA	NA|276aa|up_6|NZ_CP033249.1_3312570_3313398_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|300aa|up_5|NZ_CP033249.1_3313397_3314297_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|445aa|up_4|NZ_CP033249.1_3314506_3315841_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|476aa|up_3|NZ_CP033249.1_3316307_3317735_-	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|112aa|up_2|NZ_CP033249.1_3317815_3318151_-	NA	NA|132aa|up_1|NZ_CP033249.1_3318152_3318548_-	NA	NA|587aa|up_0|NZ_CP033249.1_3318997_3320758_+	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|528aa|down_0|NZ_CP033249.1_3320943_3322527_-	cd13609, PBP2_Opu_like_1, Substrate-binding domain of putative ABC-type osmoprotectant uptake system; the type 2 periplasmic-binding protein fold	NA|376aa|down_1|NZ_CP033249.1_3322526_3323654_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|210aa|down_2|NZ_CP033249.1_3323797_3324427_+	COG0490, COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism]	NA|241aa|down_3|NZ_CP033249.1_3324613_3325336_-	pfam14417, MEDS, MEDS: MEthanogen/methylotroph, DcmR Sensory domain	NA|113aa|down_4|NZ_CP033249.1_3325572_3325911_-	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|526aa|down_5|NZ_CP033249.1_3325955_3327533_-	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|109aa|down_6|NZ_CP033249.1_3327593_3327920_-	NA	NA|471aa|down_7|NZ_CP033249.1_3328304_3329717_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|498aa|down_8|NZ_CP033249.1_3330158_3331652_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|413aa|down_9|NZ_CP033249.1_3331839_3333078_+	pfam00872, Transposase_mut, Transposase, Mutator family
GCF_009650335.1_ASM965033v1	NZ_CP033249	Clostridium butyricum strain CFSA3989 chromosome, complete genome	5	3375822-3375908	4	CRISPRCasFinder	no	RT	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	Unclear	TTAATATTATTACATTTGTAGTTA	24	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA|234aa|up_9|NZ_CP033249.1_3356853_3357555_+,NA|133aa|up_4|NZ_CP033249.1_3366153_3366552_-,NA	NA|234aa|up_9|NZ_CP033249.1_3356853_3357555_+	NA	NA|233aa|up_8|NZ_CP033249.1_3357855_3358554_-	COG4750, LicC, CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane]	NA|617aa|up_7|NZ_CP033249.1_3358744_3360595_-	cd05151, ChoK-like, Choline Kinase and similar proteins	NA|331aa|up_6|NZ_CP033249.1_3361203_3362196_-	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|1024aa|up_5|NZ_CP033249.1_3362681_3365753_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|133aa|up_4|NZ_CP033249.1_3366153_3366552_-	NA	NA|671aa|up_3|NZ_CP033249.1_3366894_3368907_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|747aa|up_2|NZ_CP033249.1_3369510_3371751_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|532aa|up_1|NZ_CP033249.1_3372093_3373689_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|350aa|up_0|NZ_CP033249.1_3374756_3375806_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|1002aa|down_0|NZ_CP033249.1_3376017_3379023_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|548aa|down_1|NZ_CP033249.1_3379668_3381312_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|331aa|down_2|NZ_CP033249.1_3381904_3382897_-	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	RT|472aa|down_3|NZ_CP033249.1_3383316_3384732_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|746aa|down_4|NZ_CP033249.1_3385290_3387528_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|326aa|down_5|NZ_CP033249.1_3388046_3389024_-	cd01539, PBP1_GGBP, periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species	NA|669aa|down_6|NZ_CP033249.1_3389038_3391045_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|506aa|down_7|NZ_CP033249.1_3391513_3393031_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|594aa|down_8|NZ_CP033249.1_3393469_3395251_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|668aa|down_9|NZ_CP033249.1_3396061_3398065_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein
GCF_009650335.1_ASM965033v1	NZ_CP033249	Clostridium butyricum strain CFSA3989 chromosome, complete genome	6	3445165-3445364	2	PILER-CR	no		csx1,cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	TGGTATTATTTAAATGA	17	0	0	NA	NA	NA	3	3	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA,NA	NA|360aa|up_9|NZ_CP033249.1_3433879_3434959_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|392aa|up_8|NZ_CP033249.1_3434970_3436146_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|368aa|up_7|NZ_CP033249.1_3436148_3437252_-	pfam13489, Methyltransf_23, Methyltransferase domain	NA|415aa|up_6|NZ_CP033249.1_3437289_3438534_-	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system	NA|258aa|up_5|NZ_CP033249.1_3438537_3439311_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|360aa|up_4|NZ_CP033249.1_3439370_3440450_-	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|474aa|up_3|NZ_CP033249.1_3440753_3442175_+	TIGR03023, Sugar_transferase	NA|132aa|up_2|NZ_CP033249.1_3442226_3442622_-	pfam05168, HEPN, HEPN domain	NA|105aa|up_1|NZ_CP033249.1_3442614_3442929_-	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|615aa|up_0|NZ_CP033249.1_3443091_3444936_+	pfam04932, Wzy_C, O-Antigen ligase	NA|570aa|down_0|NZ_CP033249.1_3446927_3448637_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|621aa|down_1|NZ_CP033249.1_3449019_3450882_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|183aa|down_2|NZ_CP033249.1_3451039_3451588_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|528aa|down_3|NZ_CP033249.1_3451868_3453452_-	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|621aa|down_4|NZ_CP033249.1_3453584_3455447_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|604aa|down_5|NZ_CP033249.1_3455999_3457811_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|612aa|down_6|NZ_CP033249.1_3458383_3460219_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|397aa|down_7|NZ_CP033249.1_3460650_3461841_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|414aa|down_8|NZ_CP033249.1_3461936_3463178_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|444aa|down_9|NZ_CP033249.1_3463601_3464933_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]
GCF_009650335.1_ASM965033v1	NZ_CP033249	Clostridium butyricum strain CFSA3989 chromosome, complete genome	7	3449096-3449313	3	PILER-CR	no		csx1,cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	TTTAAGAAGTACCAAGTTCC	20	0	0	NA	NA	NA	3	3	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA,NA|76aa|down_8|NZ_CP033249.1_3465867_3466095_+	NA|368aa|up_9|NZ_CP033249.1_3436148_3437252_-	pfam13489, Methyltransf_23, Methyltransferase domain	NA|415aa|up_8|NZ_CP033249.1_3437289_3438534_-	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system	NA|258aa|up_7|NZ_CP033249.1_3438537_3439311_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|360aa|up_6|NZ_CP033249.1_3439370_3440450_-	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|474aa|up_5|NZ_CP033249.1_3440753_3442175_+	TIGR03023, Sugar_transferase	NA|132aa|up_4|NZ_CP033249.1_3442226_3442622_-	pfam05168, HEPN, HEPN domain	NA|105aa|up_3|NZ_CP033249.1_3442614_3442929_-	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|615aa|up_2|NZ_CP033249.1_3443091_3444936_+	pfam04932, Wzy_C, O-Antigen ligase	NA|523aa|up_1|NZ_CP033249.1_3445091_3446660_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|570aa|up_0|NZ_CP033249.1_3446927_3448637_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|183aa|down_0|NZ_CP033249.1_3451039_3451588_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|528aa|down_1|NZ_CP033249.1_3451868_3453452_-	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|621aa|down_2|NZ_CP033249.1_3453584_3455447_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|604aa|down_3|NZ_CP033249.1_3455999_3457811_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|612aa|down_4|NZ_CP033249.1_3458383_3460219_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|397aa|down_5|NZ_CP033249.1_3460650_3461841_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|414aa|down_6|NZ_CP033249.1_3461936_3463178_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|444aa|down_7|NZ_CP033249.1_3463601_3464933_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|76aa|down_8|NZ_CP033249.1_3465867_3466095_+	NA	NA|595aa|down_9|NZ_CP033249.1_3466413_3468198_-	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain
GCF_009650335.1_ASM965033v1	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	1	882004-882115	1	CRISPRCasFinder	no		WYL,DEDDh,RT,csa3	Orphan	TTACTAAAATCACCGTTCGCAAGGGTAAAA	30	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA|488aa|up_0|NZ_CP033248.1_880080_881544_-,NA	NA|138aa|up_9|NZ_CP033248.1_871472_871886_-	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|285aa|up_8|NZ_CP033248.1_872009_872864_-	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|182aa|up_7|NZ_CP033248.1_872924_873470_-	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|159aa|up_6|NZ_CP033248.1_873525_874002_-	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|105aa|up_5|NZ_CP033248.1_874617_874932_-	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|249aa|up_4|NZ_CP033248.1_874933_875680_-	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|281aa|up_3|NZ_CP033248.1_876249_877092_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|257aa|up_2|NZ_CP033248.1_877101_877872_-	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|554aa|up_1|NZ_CP033248.1_878132_879794_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|488aa|up_0|NZ_CP033248.1_880080_881544_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
GCF_009650335.1_ASM965033v1	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	2	882198-882288	2	CRISPRCasFinder	no		WYL,DEDDh,RT,csa3	Orphan	TTACTAAAATCACCGTTCGCAAGGGTAAAA	30	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,csa3,DEDDh,DinG,RT,WYL	NA|488aa|up_0|NZ_CP033248.1_880080_881544_-,NA	NA|138aa|up_9|NZ_CP033248.1_871472_871886_-	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|285aa|up_8|NZ_CP033248.1_872009_872864_-	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|182aa|up_7|NZ_CP033248.1_872924_873470_-	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|159aa|up_6|NZ_CP033248.1_873525_874002_-	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|105aa|up_5|NZ_CP033248.1_874617_874932_-	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|249aa|up_4|NZ_CP033248.1_874933_875680_-	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|281aa|up_3|NZ_CP033248.1_876249_877092_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|257aa|up_2|NZ_CP033248.1_877101_877872_-	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|554aa|up_1|NZ_CP033248.1_878132_879794_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|488aa|up_0|NZ_CP033248.1_880080_881544_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
