assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009664345.1_ASM966434v1	NZ_CP043547	Planctomycetales bacterium 10988 chromosome, complete genome	1	452895-454520	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	 Type I-U?,Type I-C,Type I-U	GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC,GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC,GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	24,24,23	24	TypeI-U?,TypeI-C,TypeI-U	RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	NA|317aa|up_9|NZ_CP043547.1_446721_447672_+,NA|81aa|up_8|NZ_CP043547.1_447687_447930_+,NA|133aa|up_7|NZ_CP043547.1_447981_448380_+,NA|71aa|up_6|NZ_CP043547.1_448460_448673_+,NA|78aa|up_5|NZ_CP043547.1_448707_448941_-,NA|229aa|up_3|NZ_CP043547.1_450480_451167_+,NA|74aa|up_1|NZ_CP043547.1_452084_452306_+,NA	NA|317aa|up_9|NZ_CP043547.1_446721_447672_+	NA	NA|81aa|up_8|NZ_CP043547.1_447687_447930_+	NA	NA|133aa|up_7|NZ_CP043547.1_447981_448380_+	NA	NA|71aa|up_6|NZ_CP043547.1_448460_448673_+	NA	NA|78aa|up_5|NZ_CP043547.1_448707_448941_-	NA	NA|379aa|up_4|NZ_CP043547.1_448943_450080_+	cd00140, beta_clamp, Beta clamp domain	NA|229aa|up_3|NZ_CP043547.1_450480_451167_+	NA	NA|242aa|up_2|NZ_CP043547.1_451310_452036_+	pfam09234, DUF1963, Domain of unknown function (DUF1963)	NA|74aa|up_1|NZ_CP043547.1_452084_452306_+	NA	NA|176aa|up_0|NZ_CP043547.1_452325_452853_+	sd00006, TPR, Tetratricopeptide repeat	cas2|97aa|down_0|NZ_CP043547.1_454706_454997_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|345aa|down_1|NZ_CP043547.1_454999_456034_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|238aa|down_2|NZ_CP043547.1_456045_456759_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|290aa|down_3|NZ_CP043547.1_456836_457706_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|611aa|down_4|NZ_CP043547.1_457716_459549_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|222aa|down_5|NZ_CP043547.1_459545_460211_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|749aa|down_6|NZ_CP043547.1_460422_462669_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|129aa|down_7|NZ_CP043547.1_463054_463441_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|1136aa|down_8|NZ_CP043547.1_463437_466845_+	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|989aa|down_9|NZ_CP043547.1_467282_470249_+	pfam05045, RgpF, Rhamnan synthesis protein F
GCF_009664345.1_ASM966434v1	NZ_CP043547	Planctomycetales bacterium 10988 chromosome, complete genome	2	3690063-3692199	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8u1,cas7,csb2gr5,cas2,DinG	RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	Unclear	GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG,GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC,GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	35,36,36	0	0	NA	NA	NA:NA:NA	29,29,29	29	Unclear	RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	NA|141aa|up_8|NZ_CP043547.1_3675086_3675509_+,NA|255aa|up_7|NZ_CP043547.1_3675505_3676270_+,NA|411aa|up_6|NZ_CP043547.1_3676422_3677655_+,NA|287aa|down_1|NZ_CP043547.1_3694423_3695284_+,NA|199aa|down_2|NZ_CP043547.1_3695299_3695896_-,NA|291aa|down_7|NZ_CP043547.1_3702288_3703161_-	NA|204aa|up_9|NZ_CP043547.1_3674497_3675109_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|141aa|up_8|NZ_CP043547.1_3675086_3675509_+	NA	NA|255aa|up_7|NZ_CP043547.1_3675505_3676270_+	NA	NA|411aa|up_6|NZ_CP043547.1_3676422_3677655_+	NA	NA|616aa|up_5|NZ_CP043547.1_3677683_3679531_+	COG0433, COG0433,  HerA helicase [Replication, recombination, and repair]	cas3|836aa|up_4|NZ_CP043547.1_3679603_3682111_+	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	cas8u1|786aa|up_3|NZ_CP043547.1_3682100_3684458_+	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc	cas7|330aa|up_2|NZ_CP043547.1_3684486_3685476_+	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	csb2gr5|567aa|up_1|NZ_CP043547.1_3685493_3687194_+	cd09734, Csb2_I-U, CRISPR/Cas system-associated protein Csb2	cas2|98aa|up_0|NZ_CP043547.1_3689127_3689421_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|345aa|down_0|NZ_CP043547.1_3693113_3694148_-	COG4956, COG4956, Integral membrane protein (PIN domain superfamily) [General function prediction only]	NA|287aa|down_1|NZ_CP043547.1_3694423_3695284_+	NA	NA|199aa|down_2|NZ_CP043547.1_3695299_3695896_-	NA	NA|200aa|down_3|NZ_CP043547.1_3696642_3697242_+	PRK00215, PRK00215, transcriptional repressor LexA	NA|111aa|down_4|NZ_CP043547.1_3697574_3697907_+	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2	NA|589aa|down_5|NZ_CP043547.1_3698549_3700316_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|512aa|down_6|NZ_CP043547.1_3700482_3702018_+	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases	NA|291aa|down_7|NZ_CP043547.1_3702288_3703161_-	NA	DinG|478aa|down_8|NZ_CP043547.1_3703605_3705039_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|139aa|down_9|NZ_CP043547.1_3705274_3705691_-	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR
GCF_009664345.1_ASM966434v1	NZ_CP043547	Planctomycetales bacterium 10988 chromosome, complete genome	3	5580627-5582960	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	RT,cas2,cas1,cas7,cas8b3,cas3,cas6,WYL	RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	Unclear	GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC,GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC,GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	36,36,36	0	0	NA	NA	NA:NA:NA	32,32,32	32	Unclear	RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	NA|73aa|up_9|NZ_CP043547.1_5567383_5567602_+,NA|58aa|up_8|NZ_CP043547.1_5567662_5567836_+,NA|442aa|up_7|NZ_CP043547.1_5567954_5569280_-,NA|61aa|up_4|NZ_CP043547.1_5574347_5574530_-,NA|379aa|up_3|NZ_CP043547.1_5574872_5576009_+,NA|227aa|up_2|NZ_CP043547.1_5576215_5576896_+,NA|230aa|up_1|NZ_CP043547.1_5577684_5578374_-,NA	NA|73aa|up_9|NZ_CP043547.1_5567383_5567602_+	NA	NA|58aa|up_8|NZ_CP043547.1_5567662_5567836_+	NA	NA|442aa|up_7|NZ_CP043547.1_5567954_5569280_-	NA	NA|685aa|up_6|NZ_CP043547.1_5569276_5571331_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|989aa|up_5|NZ_CP043547.1_5571363_5574330_-	TIGR04534, hypothetical_protein, ELWxxDGT repeat	NA|61aa|up_4|NZ_CP043547.1_5574347_5574530_-	NA	NA|379aa|up_3|NZ_CP043547.1_5574872_5576009_+	NA	NA|227aa|up_2|NZ_CP043547.1_5576215_5576896_+	NA	NA|230aa|up_1|NZ_CP043547.1_5577684_5578374_-	NA	RT|377aa|up_0|NZ_CP043547.1_5579083_5580214_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	cas2|99aa|down_0|NZ_CP043547.1_5583243_5583540_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|568aa|down_1|NZ_CP043547.1_5583559_5585263_-	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	NA|243aa|down_2|NZ_CP043547.1_5585238_5585967_-	cd09688, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|319aa|down_3|NZ_CP043547.1_5585970_5586927_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8b3|573aa|down_4|NZ_CP043547.1_5586978_5588697_-	TIGR04413, hypothetical_protein_LEP1GSC082_4029, CRISPR type MYXAN-associated protein Cmx8	cas3|799aa|down_5|NZ_CP043547.1_5588666_5591063_-	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas6|208aa|down_6|NZ_CP043547.1_5591059_5591683_-	pfam09559, Cas6, Cas6 Crispr	NA|140aa|down_7|NZ_CP043547.1_5591699_5592119_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	WYL|334aa|down_8|NZ_CP043547.1_5592450_5593452_-	pfam13280, WYL, WYL domain	NA|657aa|down_9|NZ_CP043547.1_5594016_5595987_+	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain
GCF_009664345.1_ASM966434v1	NZ_CP043547	Planctomycetales bacterium 10988 chromosome, complete genome	4	5825319-5825430	4	CRISPRCasFinder	no		RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	Orphan	AAAAGAAGGAAAAGAAGGCGAGTCC	25	0	0	NA	NA	NA	1	1	Orphan	RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	NA,NA|372aa|down_0|NZ_CP043547.1_5826512_5827628_+,NA|119aa|down_5|NZ_CP043547.1_5834058_5834415_+	NA|240aa|up_9|NZ_CP043547.1_5804829_5805549_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|236aa|up_8|NZ_CP043547.1_5806059_5806767_+	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional	NA|259aa|up_7|NZ_CP043547.1_5807381_5808158_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|1799aa|up_6|NZ_CP043547.1_5808470_5813867_+	pfam13360, PQQ_2, PQQ-like domain	NA|346aa|up_5|NZ_CP043547.1_5814322_5815360_+	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement	NA|350aa|up_4|NZ_CP043547.1_5815438_5816488_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|301aa|up_3|NZ_CP043547.1_5816456_5817359_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|779aa|up_2|NZ_CP043547.1_5817425_5819762_+	pfam07584, BatA, Aerotolerance regulator N-terminal	NA|834aa|up_1|NZ_CP043547.1_5819762_5822264_+	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|759aa|up_0|NZ_CP043547.1_5822339_5824616_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|372aa|down_0|NZ_CP043547.1_5826512_5827628_+	NA	NA|392aa|down_1|NZ_CP043547.1_5827884_5829060_+	pfam08305, NPCBM, NPCBM/NEW2 domain	NA|581aa|down_2|NZ_CP043547.1_5829056_5830799_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|367aa|down_3|NZ_CP043547.1_5830898_5831999_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|659aa|down_4|NZ_CP043547.1_5832067_5834044_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|119aa|down_5|NZ_CP043547.1_5834058_5834415_+	NA	NA|201aa|down_6|NZ_CP043547.1_5834562_5835165_+	pfam11023, DUF2614, Zinc-ribbon containing domain	NA|536aa|down_7|NZ_CP043547.1_5835169_5836777_-	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|614aa|down_8|NZ_CP043547.1_5836903_5838745_-	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed	NA|319aa|down_9|NZ_CP043547.1_5839272_5840229_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]
