The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046037	Lactobacillus sakei strain CBA3614 chromosome, complete genome	1944111	13477	25534	1944111	transposase	Enterococcus_phage(33.33%)	12	NA	NA
WP_094365751.1|13477_14850_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.0	4.6e-46
WP_035147736.1|14933_15632_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	46.4	1.7e-17
WP_011374858.1|16300_16552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035147729.1|16779_17154_-	hypothetical protein	NA	E3W8I0	Leuconostoc_phage	32.7	6.9e-05
WP_035147731.1|17146_18451_-	Y-family DNA polymerase	NA	Q6DMX4	Streptococcus_phage	39.7	1.3e-85
WP_052039308.1|18450_18696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085391464.1|18715_19090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035147736.1|19116_19815_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	46.4	1.7e-17
WP_016265285.1|20057_22100_-	potassium transporter	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	35.7	3.0e-70
WP_035146208.1|22563_23043_+	nucleoside 2-deoxyribosyltransferase	NA	A0A1D3SPR3	Enterococcus_phage	37.2	3.8e-16
WP_094365753.1|23094_24468_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.2	6.6e-45
WP_016265287.1|24814_25534_-	aquaporin family protein	NA	M1HCP3	Acanthocystis_turfacea_Chlorella_virus	34.1	2.9e-28
>prophage 2
NZ_CP046037	Lactobacillus sakei strain CBA3614 chromosome, complete genome	1944111	51018	105169	1944111	tRNA,transposase	Bacillus_phage(11.76%)	47	NA	NA
WP_094365768.1|51018_52390_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.4	2.7e-46
WP_056948755.1|52472_53339_-	glucose transporter GlcU	NA	NA	NA	NA	NA
WP_056948756.1|53627_54236_-	VanZ family protein	NA	NA	NA	NA	NA
WP_056948758.1|54448_55507_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_094365769.1|55610_57788_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	49.1	2.2e-167
WP_016265316.1|57837_58299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016265317.1|58292_59045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094365771.1|59390_60320_+|transposase	IS30-like element ISLpl1 family transposase	transposase	H7BW47	unidentified_phage	34.4	3.0e-25
WP_025016356.1|61776_63012_+	cytosine deaminase	NA	NA	NA	NA	NA
WP_025016355.1|63062_64499_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	33.6	1.7e-30
WP_016265321.1|64498_65239_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011374914.1|65524_65752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025016354.1|65886_66651_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_035146153.1|66787_68179_+	amino acid permease	NA	NA	NA	NA	NA
WP_011373852.1|69187_70108_-|transposase	IS30-like element ISLsa1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	38.2	9.2e-51
WP_094365772.1|70732_71884_-	molecular chaperone DnaJ	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	29.8	1.4e-19
WP_016265325.1|72003_73845_-	molecular chaperone DnaK	NA	A0A2P1EIW2	Megavirus	47.5	1.1e-135
WP_016265326.1|73873_74467_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_025016350.1|74482_75541_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_094365774.1|75721_76369_-	CatB-related O-acetyltransferase	NA	M1HS53	Paramecium_bursaria_Chlorella_virus	30.6	3.6e-09
WP_035146146.1|77003_78143_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
WP_016265330.1|78142_79096_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	36.4	5.3e-09
WP_025016347.1|79114_80032_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_094365898.1|80167_80908_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_025016345.1|81098_81617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061827042.1|81609_82929_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_011374944.1|83175_83532_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_016265335.1|83554_86368_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	24.2	2.3e-20
WP_011374946.1|86385_86691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011374947.1|86687_86990_-	YlxR family protein	NA	NA	NA	NA	NA
WP_011374948.1|87001_88219_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_016265337.1|88237_88711_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_094365775.1|88851_89862_-	lactate dehydrogenase	NA	M1HMI7	Paramecium_bursaria_Chlorella_virus	31.7	2.9e-37
WP_094365776.1|89877_90918_-	malate permease	NA	NA	NA	NA	NA
WP_154255153.1|91122_91473_+	DUF2200 family protein	NA	NA	NA	NA	NA
WP_094365778.1|91548_91929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094365779.1|91953_92925_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_094365780.1|93191_93551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094365782.1|93638_94568_+|transposase	IS30-like element ISLpl1 family transposase	transposase	H7BW47	unidentified_phage	34.1	1.5e-24
WP_094365783.1|94533_95337_-	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_154255155.1|95396_97271_-	helicase	NA	I3VYY6	Thermoanaerobacterium_phage	23.4	1.0e-16
WP_094365785.1|97257_98529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094365786.1|98518_101440_-	type III restriction-modification system endonuclease	NA	Q71TG1	Escherichia_phage	29.3	1.2e-80
WP_094365787.1|101439_103563_-	site-specific DNA-methyltransferase	NA	Q1MVP0	Enterobacteria_phage	30.2	2.7e-69
WP_094365899.1|103646_103904_-	plasmid replication protein	NA	NA	NA	NA	NA
WP_154255156.1|104021_104864_-|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	97.5	1.3e-152
WP_094365789.1|104917_105169_-|transposase	transposase	transposase	Q6J1X3	Lactobacillus_phage	94.0	7.8e-37
>prophage 3
NZ_CP046037	Lactobacillus sakei strain CBA3614 chromosome, complete genome	1944111	125765	133874	1944111		Bacillus_phage(33.33%)	9	NA	NA
WP_025016406.1|125765_127511_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	27.7	1.2e-46
WP_011374970.1|127652_127883_-	YneF family protein	NA	NA	NA	NA	NA
WP_011374971.1|127963_128206_-	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_011374972.1|128340_128955_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	58.2	1.1e-15
WP_011374973.1|129088_129607_-	adenine phosphoribosyltransferase	NA	A0A2K9L2N8	Tupanvirus	32.2	5.6e-13
WP_025016402.1|129630_131943_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.9	3.8e-77
WP_061827025.1|132087_133080_+	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	36.6	1.8e-47
WP_011374976.1|133165_133531_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_011374977.1|133547_133874_+	heavy metal-binding domain-containing protein	NA	M4STD1	Rhodobacter_phage	34.6	5.4e-06
>prophage 4
NZ_CP046037	Lactobacillus sakei strain CBA3614 chromosome, complete genome	1944111	1340356	1349990	1944111		Streptococcus_phage(33.33%)	9	NA	NA
WP_094365655.1|1340356_1343209_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	54.9	2.9e-305
WP_016264747.1|1343330_1343867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011374234.1|1343992_1344877_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	31.0	8.4e-09
WP_016264749.1|1344873_1345908_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	54.8	9.0e-95
WP_094365657.1|1345910_1346855_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.0	3.8e-52
WP_035146456.1|1346946_1347402_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_035146459.1|1347516_1348041_-	DsbA family protein	NA	NA	NA	NA	NA
WP_025016311.1|1348265_1348850_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	53.4	1.5e-51
WP_082267622.1|1349393_1349990_-	glycoside hydrolase family 73 protein	NA	A0A0A7RUS8	Clostridium_phage	44.0	9.0e-23
>prophage 5
NZ_CP046037	Lactobacillus sakei strain CBA3614 chromosome, complete genome	1944111	1455743	1464037	1944111		Prochlorococcus_phage(33.33%)	8	NA	NA
WP_035146568.1|1455743_1457039_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	30.6	1.8e-15
WP_011374364.1|1457151_1457877_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	40.4	4.1e-38
WP_016264839.1|1457869_1458130_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_035146570.1|1458126_1458813_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_035146572.1|1458802_1461028_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.1	5.0e-151
WP_035146574.1|1461003_1462437_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.9	4.9e-51
WP_094365686.1|1462442_1463471_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.3	1.3e-64
WP_035146576.1|1463467_1464037_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.0	2.4e-25
>prophage 6
NZ_CP046037	Lactobacillus sakei strain CBA3614 chromosome, complete genome	1944111	1798331	1805727	1944111	tRNA	Staphylococcus_phage(33.33%)	7	NA	NA
WP_025015768.1|1798331_1799177_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	44.2	7.7e-20
WP_035145821.1|1799373_1799874_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	38.7	3.5e-28
WP_016265161.1|1799884_1800835_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	64.3	1.6e-122
WP_035145823.1|1800981_1802871_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.1	2.3e-48
WP_011374705.1|1802983_1803445_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035145825.1|1803513_1804707_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	G3MAR3	Bacillus_virus	36.1	7.3e-32
WP_016265164.1|1804854_1805727_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	41.5	4.8e-57
>prophage 1
NZ_CP046038	Lactobacillus sakei strain CBA3614 plasmid unnamed1, complete sequence	53648	37219	52259	53648	transposase	Enterococcus_phage(22.22%)	14	NA	NA
WP_154255312.1|37219_39805_+	AAA family ATPase	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	28.7	2.1e-44
WP_035147318.1|40021_40603_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	34.9	4.1e-20
WP_080752786.1|42147_42600_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_094365906.1|42606_44775_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	60.2	2.8e-255
WP_154255313.1|44881_45808_+	ribonucleoside-diphosphate reductase	NA	A0A2H4P8A9	Corynebacterium_phage	32.1	1.0e-36
WP_016265840.1|45822_46773_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	55.0	3.2e-99
WP_154255314.1|46913_47843_+|transposase	IS30 family transposase	transposase	H7BW47	unidentified_phage	34.4	1.1e-24
WP_052039314.1|47885_48146_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015474696.1|48278_49610_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.7	1.9e-20
WP_006844821.1|49771_50419_-	DsbA family oxidoreductase	NA	NA	NA	NA	NA
WP_006844822.1|50437_51382_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	47.9	7.7e-77
WP_080280589.1|51466_51601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006844823.1|51600_51924_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_015474701.1|51944_52259_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	41.0	2.0e-13
