The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	229785	286544	2737464	integrase,transposase,tRNA	Staphylococcus_phage(38.46%)	56	220052:220069	266083:266100
220052:220069	attL	TACTATCAAAAACAACTT	NA	NA	NA	NA
WP_151516914.1|229785_230766_+|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_002486117.1|230903_231755_+|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	96.4	9.7e-71
WP_002486124.1|232557_233955_+	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA	NA
WP_080012077.1|235757_236339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002486146.1|236603_237416_-	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002484928.1|237780_238668_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_002484919.1|239025_239787_-	tandem-type lipoprotein	NA	NA	NA	NA	NA
WP_001106057.1|240103_240778_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
WP_001817892.1|240868_241066_-	replication family protein	NA	A0A286QS97	Streptococcus_phage	62.0	1.2e-08
WP_000336290.1|241078_241852_-	protein rep	NA	NA	NA	NA	NA
WP_000119405.1|242096_243359_-	Plasmid recombination enzyme type 2	NA	NA	NA	NA	NA
WP_001242578.1|243865_244270_-	bleomycin binding protein	NA	NA	NA	NA	NA
WP_001795128.1|244486_245257_-	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NA	NA	NA	NA	NA
WP_001106057.1|245449_246124_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
WP_020444595.1|246159_246549_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_000958858.1|247305_248049_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_000872606.1|248145_248574_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_154435876.1|248619_250629_-	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NA	NA	NA	NA	NA
WP_100481765.1|250725_252483_+	beta-lactam sensor/signal transducer MecR1	NA	NA	NA	NA	NA
WP_000369214.1|252482_252854_+	mecA-type methicillin resistance repressor MecI	NA	NA	NA	NA	NA
WP_014532405.1|252938_253007_-	phenol-soluble modulin PSM-mec	NA	NA	NA	NA	NA
WP_010922808.1|253340_254471_+	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_000438836.1|255950_257015_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000220507.1|257150_257411_+	persulfide-sensing transcriptional repressor CstR	NA	NA	NA	NA	NA
WP_000378485.1|259021_261436_-	cadmium-translocating P-type ATPase CadA	NA	E4ZFI9	Streptococcus_phage	63.4	1.3e-250
WP_000159127.1|261428_261794_-	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	49.6	7.7e-25
WP_001041908.1|262031_262409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002485298.1|262415_264308_-|integrase	phage integrase family protein	integrase	NA	NA	NA	NA
WP_000088091.1|264502_264826_-	DNA recombinase	NA	NA	NA	NA	NA
WP_001077283.1|264818_265025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000836008.1|265026_265548_-	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_000833212.1|265566_265878_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001045719.1|265880_265970_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000171449.1|265962_266313_-	hypothetical protein	NA	NA	NA	NA	NA
266083:266100	attR	AAGTTGTTTTTGATAGTA	NA	NA	NA	NA
WP_001186596.1|266783_268412_-	recombinase RecB	NA	A0A0S2SXR4	Bacillus_phage	31.7	1.1e-46
WP_000816499.1|268432_269779_-	recombinase family protein	NA	A6M972	Geobacillus_virus	28.2	2.0e-22
WP_001791132.1|269971_270247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100481764.1|270336_272124_-	DUF927 domain-containing protein	NA	NA	NA	NA	NA
WP_000659554.1|272123_272408_-	DUF1413 domain-containing protein	NA	NA	NA	NA	NA
WP_000613217.1|272545_273595_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000489177.1|273647_274220_+	hypothetical protein	NA	Q6DMS4	Streptococcus_phage	46.0	5.2e-36
WP_002485353.1|274449_275874_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_002504428.1|275956_276403_-	hypothetical protein	NA	A0A1V0SBV6	Catovirus	35.4	1.7e-10
WP_100214435.1|277035_277356_-	MFS transporter	NA	NA	NA	NA	NA
WP_001105999.1|277379_278054_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.0e-127
WP_011082551.1|278321_279683_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000425271.1|279982_280390_+	Hg(II)-responsive transcriptional regulator MerR	NA	NA	NA	NA	NA
WP_000746201.1|280406_280760_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_000010351.1|280756_281437_+	cytochrome c biosynthesis protein	NA	NA	NA	NA	NA
WP_002380761.1|281562_281910_+	mercury transporter	NA	NA	NA	NA	NA
WP_000193219.1|281967_283611_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.4	1.7e-50
WP_000790334.1|283692_284343_+	organomercurial lyase MerB	NA	NA	NA	NA	NA
WP_001802815.1|284537_285086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011082552.1|285282_285498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001802813.1|285522_285804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002487846.1|285869_286544_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.7	9.9e-127
>prophage 2
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	531103	547380	2737464	transposase,holin,protease	Staphylococcus_phage(50.0%)	15	NA	NA
WP_080033476.1|531103_531922_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_071813272.1|531966_532233_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001105991.1|532718_533393_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9SKD3	Staphylococcus_phage	99.6	6.8e-128
WP_001105991.1|533552_534227_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9SKD3	Staphylococcus_phage	99.6	6.8e-128
WP_002504592.1|534815_535592_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_001831512.1|535730_536909_+	MFS transporter	NA	NA	NA	NA	NA
WP_080012088.1|536991_538359_-	carboxylesterase/lipase family protein	NA	NA	NA	NA	NA
WP_001832901.1|538663_540343_-	APC family permease	NA	NA	NA	NA	NA
WP_002438246.1|540942_541995_-	2,3-butanediol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	21.2	3.4e-09
WP_001831407.1|542484_543741_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	53.8	2.7e-21
WP_001831629.1|543743_544379_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002438247.1|544446_545340_+	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002438248.1|545339_546035_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002438249.1|546216_546918_-|holin	antiholin-like protein LrgB	holin	NA	NA	NA	NA
WP_002438251.1|546921_547380_-|holin	antiholin-like murein hydrolase modulator LrgA	holin	NA	NA	NA	NA
>prophage 3
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	895917	1029785	2737464	terminase,integrase,holin,transposase	Staphylococcus_phage(97.14%)	145	957670:957689	1000791:1000810
WP_100481738.1|895917_897852_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2H4UUX5	Bodo_saltans_virus	26.9	7.6e-47
WP_002468998.1|898198_898834_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002497516.1|898974_899256_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002504807.1|899959_900565_+	LPXTG cell wall anchor domain-containing protein	NA	A0A0N9STB7	Staphylococcus_phage	100.0	3.8e-77
WP_002504808.1|900707_902354_+	hypothetical protein	NA	A0A0N9SHY1	Staphylococcus_phage	100.0	0.0e+00
WP_002504810.1|903048_903249_+	hypothetical protein	NA	A0A0N9RTY2	Staphylococcus_phage	100.0	1.2e-27
WP_002504811.1|903324_904827_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGX6	Staphylococcus_phage	100.0	3.4e-284
WP_002504812.1|904903_907297_-	SGNH/GDSL hydrolase family protein	NA	A0A0N9RRL9	Staphylococcus_phage	100.0	0.0e+00
WP_002504813.1|907348_907678_-|holin	phage holin	holin	A0A0N9SK62	Staphylococcus_phage	100.0	4.2e-54
WP_100481737.1|907699_908212_-	hypothetical protein	NA	A0A0N9RZS7	Staphylococcus_phage	99.4	5.5e-45
WP_002504815.1|908193_908595_-	hypothetical protein	NA	A0A0N9STA8	Staphylococcus_phage	100.0	4.4e-66
WP_002504816.1|908701_911371_-	hypothetical protein	NA	A0A0N9SHX2	Staphylococcus_phage	99.9	0.0e+00
WP_002504818.1|911572_911947_-	hypothetical protein	NA	A0A0N9SK58	Staphylococcus_phage	100.0	5.0e-64
WP_002504819.1|911949_919995_-	hypothetical protein	NA	A0A0N9RTX0	Staphylococcus_phage	100.0	0.0e+00
WP_154435911.1|920055_922137_-	hypothetical protein	NA	A0A0N9SGW2	Staphylococcus_phage	99.7	0.0e+00
WP_002504822.1|930528_931545_-|integrase	site-specific integrase	integrase	A0A0N9SIX3	Staphylococcus_phage	99.7	2.3e-196
WP_154435913.1|931560_932034_-	hypothetical protein	NA	A0A0N9RRK6	Staphylococcus_phage	99.4	7.7e-86
WP_000700062.1|932033_932591_-	hypothetical protein	NA	A0A0N9SK55	Staphylococcus_phage	100.0	2.7e-98
WP_002504825.1|932674_933466_-	hypothetical protein	NA	A0A0N7GFG4	Staphylococcus_phage	100.0	5.4e-140
WP_000391855.1|933504_934377_-	hypothetical protein	NA	A0A0N9RZR7	Staphylococcus_phage	100.0	1.5e-159
WP_001177112.1|934382_934904_-	hypothetical protein	NA	A0A0N9ST98	Staphylococcus_phage	100.0	2.0e-95
WP_000384369.1|934893_935559_-	hypothetical protein	NA	A0A0N9SHW2	Staphylococcus_phage	100.0	1.3e-123
WP_042742626.1|935562_935880_-	hypothetical protein	NA	A0A0N9SK47	Staphylococcus_phage	99.0	7.5e-53
WP_000134539.1|935869_936304_-	hypothetical protein	NA	A0A0N9RTW0	Staphylococcus_phage	100.0	3.5e-69
WP_000985467.1|936321_936873_-	hypothetical protein	NA	A0A0N9SGV3	Staphylococcus_phage	100.0	1.5e-80
WP_002504827.1|936947_937949_-	hypothetical protein	NA	A0A0N9S885	Staphylococcus_phage	100.0	3.3e-110
WP_154435915.1|937987_938428_-	hypothetical protein	NA	A0A0N9SIW4	Staphylococcus_phage	99.3	2.3e-76
WP_002504829.1|938455_939835_-	hypothetical protein	NA	A0A0N9RRJ7	Staphylococcus_phage	100.0	2.0e-246
WP_000389594.1|939827_941390_-	hypothetical protein	NA	A0A0N9SK48	Staphylococcus_phage	100.0	6.6e-299
WP_002504830.1|941407_943207_-|terminase	terminase	terminase	A0A0N9RZP6	Staphylococcus_phage	100.0	6.8e-207
WP_001007716.1|943199_944084_-	hypothetical protein	NA	A0A0N9SHV5	Staphylococcus_phage	100.0	4.5e-172
WP_002504831.1|945778_946963_-	hypothetical protein	NA	A0A0N9SK37	Staphylococcus_phage	100.0	1.3e-222
WP_000057341.1|946971_947157_-	hypothetical protein	NA	A0A0N7GFG2	Staphylococcus_phage	100.0	1.7e-25
WP_002504832.1|947182_947512_-	DNA-binding protein	NA	A0A0N9RTU9	Staphylococcus_phage	100.0	1.7e-52
WP_002504833.1|947771_949268_-	hypothetical protein	NA	A0A0N9SGU3	Staphylococcus_phage	100.0	2.3e-269
WP_100481741.1|950843_950918_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104832459.1|951141_952320_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	37.2	3.3e-61
WP_002504834.1|953284_954160_+	hypothetical protein	NA	A0A0N9SIV7	Staphylococcus_phage	100.0	4.8e-166
WP_002504835.1|956018_956276_+	hypothetical protein	NA	A0A0N9RRI7	Staphylococcus_phage	100.0	1.7e-15
WP_010959243.1|956540_956702_+	hypothetical protein	NA	NA	NA	NA	NA
957670:957689	attL	TATATTTTATTTCTTAAAGT	NA	NA	NA	NA
WP_002504554.1|958089_958374_+	hypothetical protein	NA	A0A0N9SK40	Staphylococcus_phage	100.0	1.6e-46
WP_002504552.1|958553_958769_+	hypothetical protein	NA	A0A0N7GFG1	Staphylococcus_phage	100.0	2.2e-35
WP_010959242.1|958843_959104_+	hypothetical protein	NA	A0A0N9ST70	Staphylococcus_phage	100.0	7.1e-41
WP_010959241.1|959240_959630_+	hypothetical protein	NA	A0A0N9SHU5	Staphylococcus_phage	100.0	3.9e-67
WP_002504625.1|959782_960442_+	antirestriction protein ArdA	NA	A0A0N9SK30	Staphylococcus_phage	100.0	9.4e-122
WP_002504624.1|960485_960809_+	hypothetical protein	NA	A0A0N9RTT7	Staphylococcus_phage	100.0	1.5e-56
WP_002504623.1|960901_961165_+	hypothetical protein	NA	A0A0N9SGT4	Staphylococcus_phage	100.0	3.4e-43
WP_010959240.1|961193_961874_+	hypothetical protein	NA	A0A0N9S858	Staphylococcus_phage	100.0	4.6e-124
WP_010959239.1|961989_962442_+	hypothetical protein	NA	A0A0N9SIV3	Staphylococcus_phage	100.0	6.7e-79
WP_012099556.1|962441_962963_+	hypothetical protein	NA	A0A0N7GFG0	Staphylococcus_phage	100.0	5.2e-91
WP_002504685.1|963040_963469_+	hypothetical protein	NA	A0A0N9RRH5	Staphylococcus_phage	100.0	5.0e-76
WP_002504683.1|964152_965196_+|integrase	site-specific integrase	integrase	A0A0N9SK33	Staphylococcus_phage	100.0	3.8e-194
WP_002504682.1|965483_966764_+	hypothetical protein	NA	A0A0N9RZM2	Staphylococcus_phage	100.0	6.5e-236
WP_002504681.1|966775_967780_+	hypothetical protein	NA	A0A0N9ST56	Staphylococcus_phage	100.0	3.1e-185
WP_002504680.1|967939_968188_+	hypothetical protein	NA	A0A0N9SHT9	Staphylococcus_phage	100.0	2.0e-40
WP_002504679.1|968203_968692_+	hypothetical protein	NA	A0A0N9SK25	Staphylococcus_phage	100.0	8.1e-54
WP_000668931.1|968709_969390_+	hypothetical protein	NA	A0A0N9RTS7	Staphylococcus_phage	100.0	2.0e-127
WP_154435916.1|969433_970393_+	hypothetical protein	NA	A0A0N7GFF9	Staphylococcus_phage	99.4	7.4e-168
WP_002504678.1|970516_971485_+	ATP-binding protein	NA	A0A0N9SGS5	Staphylococcus_phage	100.0	5.3e-182
WP_002504677.1|971561_972080_+	hypothetical protein	NA	A0A0N9S850	Staphylococcus_phage	100.0	2.1e-92
WP_002504676.1|972101_973634_+	helicase DnaB	NA	A0A0N9SIU7	Staphylococcus_phage	100.0	5.6e-295
WP_154435918.1|973650_974763_+	hypothetical protein	NA	A0A0N9RRG7	Staphylococcus_phage	99.7	1.4e-218
WP_010959235.1|974765_976532_+	single-stranded DNA-binding protein	NA	A0A0N9SK20	Staphylococcus_phage	100.0	0.0e+00
WP_154435920.1|977153_977828_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.6	2.4e-128
WP_100502339.1|977941_978898_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	91.8	2.9e-172
WP_042742622.1|978939_979443_+	trimethoprim-resistant dihydrofolate reductase DfrC	NA	A0A0N9S8H6	Staphylococcus_phage	100.0	3.2e-90
WP_000195429.1|979520_980693_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000393259.1|980750_981143_+	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_001028141.1|981143_982583_+	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A0N9SKF6	Staphylococcus_phage	100.0	8.5e-285
WP_000195429.1|982712_983885_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001118605.1|984009_984432_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	100.0	1.0e-68
WP_001106022.1|984463_985138_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9SKD3	Staphylococcus_phage	100.0	6.2e-129
WP_002504581.1|985181_986228_+	hypothetical protein	NA	A0A0N9RU46	Staphylococcus_phage	100.0	4.8e-197
WP_002504580.1|986238_986436_+	hypothetical protein	NA	A0A0N9SH39	Staphylococcus_phage	100.0	4.0e-28
WP_002504579.1|986448_986724_+	hypothetical protein	NA	A0A0N7GFH6	Staphylococcus_phage	100.0	5.0e-45
WP_002504577.1|987015_987324_+	hypothetical protein	NA	A0A0N9RRS4	Staphylococcus_phage	100.0	5.8e-50
WP_000312937.1|987326_987590_+	hypothetical protein	NA	A0A0N9SKF2	Staphylococcus_phage	100.0	6.9e-44
WP_002504576.1|987629_988040_+	hypothetical protein	NA	A0A0N9RZZ6	Staphylococcus_phage	100.0	7.0e-75
WP_000862563.1|988036_988384_+	nuclease	NA	A0A0N9STK3	Staphylococcus_phage	100.0	4.4e-62
WP_000359469.1|988389_988614_+	hypothetical protein	NA	A0A0N9SI40	Staphylococcus_phage	100.0	2.0e-31
WP_002504575.1|988635_988875_+	hypothetical protein	NA	A0A0N7GFH5	Staphylococcus_phage	100.0	1.7e-36
WP_002504574.1|988897_989173_+	hypothetical protein	NA	A0A0N9SKC5	Staphylococcus_phage	100.0	4.5e-46
WP_002504573.1|989194_989461_+	hypothetical protein	NA	A0A0N9RU37	Staphylococcus_phage	100.0	1.0e-42
WP_002504572.1|989465_989669_+	hypothetical protein	NA	A0A0N9SH33	Staphylococcus_phage	100.0	5.7e-30
WP_002504571.1|989675_989864_+	hypothetical protein	NA	A0A0N9S8F9	Staphylococcus_phage	100.0	8.2e-31
WP_002504570.1|989865_990348_+	hypothetical protein	NA	A0A0N9SJ15	Staphylococcus_phage	100.0	3.4e-73
WP_002504569.1|990363_990543_+	hypothetical protein	NA	A0A0N9RRR6	Staphylococcus_phage	100.0	2.1e-23
WP_001187008.1|990527_990713_+	hypothetical protein	NA	A0A0N9SKE7	Staphylococcus_phage	100.0	1.5e-24
WP_002504568.1|990728_991013_+	hypothetical protein	NA	A0A0N7GFH4	Staphylococcus_phage	100.0	5.0e-48
WP_002504567.1|991009_991165_+	transcriptional regulator	NA	A0A0N9RZY5	Staphylococcus_phage	100.0	1.7e-18
WP_002504566.1|991190_991463_+	hypothetical protein	NA	A0A0N9STJ5	Staphylococcus_phage	100.0	2.7e-43
WP_002504565.1|991478_992021_+	hypothetical protein	NA	A0A0N9SI25	Staphylococcus_phage	100.0	2.7e-98
WP_002504563.1|992209_992431_+	hypothetical protein	NA	A0A0N9RU28	Staphylococcus_phage	100.0	1.3e-35
WP_010959229.1|992430_993156_+	serine/threonine protein phosphatase	NA	A0A0N9SH20	Staphylococcus_phage	100.0	2.4e-139
WP_002504561.1|993148_993466_+	hypothetical protein	NA	A0A0N9S8E9	Staphylococcus_phage	100.0	3.7e-52
WP_002504560.1|993465_994116_+	hypothetical protein	NA	A0A0N7GFH3	Staphylococcus_phage	100.0	3.1e-117
WP_002504559.1|994115_994634_+	hypothetical protein	NA	A0A0N9SJ06	Staphylococcus_phage	99.4	2.8e-97
WP_002504558.1|994796_995027_+	addiction module antitoxin	NA	A0A0N9RRQ9	Staphylococcus_phage	100.0	1.7e-33
WP_002504557.1|995026_995422_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A0N9SKD8	Staphylococcus_phage	100.0	1.0e-67
WP_002504556.1|995724_995916_+	hypothetical protein	NA	A0A0N9RZX7	Staphylococcus_phage	88.9	3.9e-20
WP_000755772.1|995899_996169_+	hypothetical protein	NA	A0A0N9STI7	Staphylococcus_phage	100.0	6.9e-39
WP_010959224.1|996225_996720_+	hypothetical protein	NA	A0A0N9SI15	Staphylococcus_phage	100.0	6.2e-86
WP_000686449.1|996723_997524_+	serine/threonine protein phosphatase	NA	A0A0N9SKA2	Staphylococcus_phage	100.0	4.0e-151
WP_002504538.1|997632_998355_+	hypothetical protein	NA	A0A0N7GFH2	Staphylococcus_phage	100.0	2.5e-91
WP_002504537.1|998460_999102_+	hypothetical protein	NA	A0A0N9RU21	Staphylococcus_phage	100.0	2.6e-60
WP_002504535.1|999349_999754_-	YolD-like family protein	NA	A0A0N9S8D9	Staphylococcus_phage	100.0	1.5e-74
WP_002504534.1|1000106_1000667_-	hypothetical protein	NA	A0A0N9SJ02	Staphylococcus_phage	100.0	4.3e-67
WP_002504533.1|1000833_1001208_+	hypothetical protein	NA	A0A0N9RRQ3	Staphylococcus_phage	100.0	7.3e-63
1000791:1000810	attR	ACTTTAAGAAATAAAATATA	NA	NA	NA	NA
WP_010959223.1|1001220_1002669_+	PHP domain-containing protein	NA	A0A0N9SKC7	Staphylococcus_phage	100.0	1.5e-281
WP_154435922.1|1003131_1005618_+	hypothetical protein	NA	A0A0N7GFH1	Staphylococcus_phage	99.9	0.0e+00
WP_002504530.1|1005729_1006110_+	hypothetical protein	NA	A0A0N9STI1	Staphylococcus_phage	99.2	4.2e-50
WP_002504529.1|1006247_1006562_+	hypothetical protein	NA	A0A0N9SI08	Staphylococcus_phage	100.0	5.4e-51
WP_010959221.1|1006571_1007870_+	ATP-dependent DNA ligase	NA	A0A0N9SK95	Staphylococcus_phage	100.0	1.3e-244
WP_002504527.1|1007957_1008347_+	hypothetical protein	NA	A0A0N9RU12	Staphylococcus_phage	100.0	1.1e-50
WP_002504526.1|1008645_1008912_+	hypothetical protein	NA	A0A0N9S8D1	Staphylococcus_phage	100.0	2.9e-42
WP_002504525.1|1008904_1009192_+	hypothetical protein	NA	A0A0N9SIZ8	Staphylococcus_phage	100.0	4.4e-44
WP_002504524.1|1009172_1009496_+	hypothetical protein	NA	A0A0N7GFH0	Staphylococcus_phage	100.0	8.2e-55
WP_000865652.1|1009501_1009753_+	hypothetical protein	NA	A0A0N9RRP5	Staphylococcus_phage	100.0	3.8e-39
WP_002504522.1|1009752_1009935_+	hypothetical protein	NA	A0A0N9SKA8	Staphylococcus_phage	100.0	1.4e-27
WP_002504521.1|1009949_1010561_+	nucleoside 2-deoxyribosyltransferase	NA	A0A0N9RZV9	Staphylococcus_phage	100.0	2.8e-112
WP_002504520.1|1010553_1010745_+	hypothetical protein	NA	A0A0N9STH2	Staphylococcus_phage	100.0	1.0e-33
WP_154435924.1|1010734_1011421_+	methyltransferase domain-containing protein	NA	A0A0N9SHZ9	Staphylococcus_phage	99.6	3.8e-126
WP_000598581.1|1011435_1012434_+	DNA cytosine methyltransferase	NA	A0A0N9SK84	Staphylococcus_phage	100.0	3.7e-194
WP_000792728.1|1012466_1012820_+	hypothetical protein	NA	A0A0N9RU04	Staphylococcus_phage	100.0	1.2e-59
WP_000356944.1|1012822_1013005_+	hypothetical protein	NA	A0A0N7GFG9	Staphylococcus_phage	100.0	3.1e-27
WP_000824898.1|1013018_1013249_+	hypothetical protein	NA	A0A0N9SGZ7	Staphylococcus_phage	100.0	1.8e-32
WP_002504517.1|1013248_1013845_+	hypothetical protein	NA	A0A0N9S8C0	Staphylococcus_phage	92.1	1.9e-57
WP_002504516.1|1013970_1014480_+	siphovirus Gp157 family protein	NA	A0A0N9SIY9	Staphylococcus_phage	100.0	2.1e-84
WP_002504515.1|1014491_1015193_+	hypothetical protein	NA	A0A0N9RRN5	Staphylococcus_phage	99.6	4.2e-128
WP_002504513.1|1015393_1015807_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A0N9RZU5	Staphylococcus_phage	99.3	1.8e-70
WP_002504512.1|1015806_1016253_+	hypothetical protein	NA	A0A0N9STF9	Staphylococcus_phage	100.0	4.0e-76
WP_044555413.1|1016307_1019184_+	hypothetical protein	NA	A0A0N7GFG8	Staphylococcus_phage	100.0	0.0e+00
WP_002504510.1|1019337_1020162_+	HNH endonuclease	NA	A0A0N9SHZ0	Staphylococcus_phage	100.0	2.7e-158
WP_071813268.1|1020352_1020709_+	ribonucleoside-diphosphate reductase	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	60.2	5.9e-38
WP_002504509.1|1020754_1021777_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0N9SK77	Staphylococcus_phage	100.0	1.1e-198
WP_002504508.1|1021804_1022407_+	AAA family ATPase	NA	A0A0N9RTZ3	Staphylococcus_phage	100.0	4.0e-111
WP_002504507.1|1022447_1022696_+	thioredoxin family protein	NA	A0A0N9SGY3	Staphylococcus_phage	100.0	1.8e-41
WP_002504506.1|1022711_1022951_+	hypothetical protein	NA	A0A0N9S8B1	Staphylococcus_phage	100.0	6.7e-38
WP_002504505.1|1022963_1023710_+	NTP pyrophosphohydrolase	NA	A0A0N9SIY2	Staphylococcus_phage	100.0	5.6e-139
WP_002504504.1|1023711_1024107_+	hypothetical protein	NA	A0A0N9RRM7	Staphylococcus_phage	100.0	5.1e-67
WP_001130902.1|1024090_1024684_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0N7GFG7	Staphylococcus_phage	100.0	7.9e-112
WP_002504503.1|1024885_1025467_+	DNA-binding protein	NA	A0A0N9SK69	Staphylococcus_phage	100.0	3.8e-103
WP_001260014.1|1025456_1026995_+	recombinase family protein	NA	A0A0N9RZT8	Staphylococcus_phage	100.0	5.3e-277
WP_002469006.1|1027876_1028101_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_002477475.1|1028534_1029785_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	29.7	9.7e-35
>prophage 4
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	1134243	1163534	2737464	terminase,head,capsid,integrase,tail,protease,portal	Bacillus_phage(41.67%)	38	1134138:1134163	1171417:1171442
1134138:1134163	attL	GTTTTCACTCTTTTTTTATTTATTTA	NA	NA	NA	NA
WP_002484510.1|1134243_1135290_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1J0MFS3	Staphylococcus_phage	36.3	5.0e-53
WP_012088039.1|1135335_1136067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002446812.1|1136107_1136482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002446811.1|1136636_1136972_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PEN2	Staphylococcus_phage	58.9	1.4e-28
WP_002446810.1|1137132_1137324_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PEL6	Staphylococcus_phage	66.7	3.1e-17
WP_002446809.1|1137377_1137701_+	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_002446808.1|1137716_1137911_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002446807.1|1138058_1139300_+	helicase SNF2	NA	A0A1B1P7L4	Bacillus_phage	57.2	6.9e-134
WP_002484586.1|1139302_1139620_+	hypothetical protein	NA	A0A2P0ZLA7	Lactobacillus_phage	46.5	3.7e-23
WP_002484599.1|1139612_1139909_+	hypothetical protein	NA	A0A1B1P7M6	Bacillus_phage	58.2	3.6e-25
WP_002495697.1|1139908_1141720_+	AAA family ATPase	NA	A0A1B1P7N0	Bacillus_phage	57.4	1.1e-164
WP_002484592.1|1141738_1141945_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484600.1|1141996_1142479_+	DUF669 domain-containing protein	NA	A0A2H4J1S8	uncultured_Caudovirales_phage	38.4	8.9e-21
WP_002484609.1|1142528_1144247_+	hypothetical protein	NA	A0A1B1P7M5	Bacillus_phage	63.5	1.3e-207
WP_002484590.1|1144260_1144611_+	transcriptional regulator	NA	A0A2H4IYG5	uncultured_Caudovirales_phage	38.8	4.8e-16
WP_002484612.1|1144641_1144860_+	DUF3310 domain-containing protein	NA	Q4ZC12	Staphylococcus_virus	78.6	1.9e-26
WP_002484605.1|1144866_1145598_+	hypothetical protein	NA	H9A0T0	Staphylococcus_phage	49.2	5.4e-62
WP_002484596.1|1145662_1145983_+	phosphoribosyl-ATP diphosphatase	NA	A0A2H4J2H9	uncultured_Caudovirales_phage	81.6	4.6e-42
WP_002484581.1|1146010_1146478_-	hypothetical protein	NA	A0A1W6JPR4	Staphylococcus_phage	41.5	3.5e-22
WP_002484606.1|1146545_1146791_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484603.1|1146868_1147063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484601.1|1147092_1148967_+	DNA primase	NA	A0A1B1P7L5	Bacillus_phage	58.0	1.2e-211
WP_002484607.1|1149290_1149782_+	DNA-directed RNA polymerase sigma-70 factor	NA	S5MAA9	Brevibacillus_phage	28.0	2.6e-07
WP_002484574.1|1149985_1150603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002446790.1|1150884_1151175_+	HNH endonuclease	NA	D2XR61	Bacillus_phage	42.2	3.2e-18
WP_002491654.1|1151497_1151836_+	hypothetical protein	NA	D2XR14	Bacillus_phage	39.4	5.8e-11
WP_002484595.1|1151819_1153454_+|terminase	terminase large subunit	terminase	A0A0U4B089	Bacillus_phage	56.6	1.8e-182
WP_002484608.1|1153469_1154606_+|portal	phage portal protein	portal	A0A0U4IIQ9	Bacillus_phage	43.8	4.0e-88
WP_002484598.1|1154605_1155352_+|protease	Clp protease ClpP	protease	A0A2H4J8Y7	uncultured_Caudovirales_phage	47.4	6.4e-42
WP_002484575.1|1155376_1156534_+|capsid	phage major capsid protein	capsid	A0A0U4JIF4	Bacillus_phage	51.7	2.2e-97
WP_002484579.1|1156560_1156869_+	hypothetical protein	NA	A0A2H4JF26	uncultured_Caudovirales_phage	39.1	1.5e-10
WP_002446783.1|1156840_1157170_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_002446782.1|1157169_1157508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484584.1|1157507_1157945_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484613.1|1157950_1158655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154435926.1|1158678_1159029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002446778.1|1159076_1159289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002504620.1|1159352_1163534_+|tail	phage tail tape measure protein	tail	A0A2P0ZLF1	Lactobacillus_phage	42.6	1.9e-63
1171417:1171442	attR	GTTTTCACTCTTTTTTTATTTATTTA	NA	NA	NA	NA
>prophage 5
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	1205538	1294834	2737464	integrase,transposase,tRNA,protease	Staphylococcus_phage(76.92%)	80	1234049:1234065	1248186:1248202
WP_011082735.1|1205538_1206618_-|integrase	site-specific integrase	integrase	A0A1J0MFS3	Staphylococcus_phage	42.1	1.6e-70
WP_002484689.1|1207583_1207784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484687.1|1207816_1208353_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002505518.1|1208834_1209164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011082734.1|1209630_1210077_+	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_002484696.1|1210073_1210523_+	hypothetical protein	NA	A0A097PBE7	Streptococcus_pyogenes_phage	40.4	5.4e-12
WP_002484694.1|1210494_1210920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011082733.1|1210924_1211185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011082732.1|1211224_1212115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011082731.1|1212225_1213473_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002505516.1|1213489_1216528_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_002484414.1|1216528_1216798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484412.1|1216914_1217217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484415.1|1217286_1219533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154435928.1|1219533_1219770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000195429.1|1219740_1220913_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_154435930.1|1220931_1221558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002505512.1|1221557_1224137_+	TraM recognition domain-containing protein	NA	NA	NA	NA	NA
WP_100481712.1|1224133_1226431_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484393.1|1226430_1226832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484394.1|1226878_1227205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011082729.1|1227210_1227807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484404.1|1227832_1229782_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_002484401.1|1229785_1230856_+	CHAP domain-containing protein	NA	A0A249Y1A9	Staphylococcus_phage	58.0	2.0e-33
WP_002484410.1|1230876_1231479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484407.1|1231475_1232333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011082728.1|1232363_1232483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011082727.1|1232538_1232859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484396.1|1232855_1233206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484400.1|1233210_1234515_+	hypothetical protein	NA	NA	NA	NA	NA
1234049:1234065	attL	AATATAATAATAAAGAA	NA	NA	NA	NA
WP_002484399.1|1234556_1236713_+	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	38.1	2.3e-76
WP_011082726.1|1236681_1237161_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002484408.1|1237171_1237933_+	class A sortase	NA	NA	NA	NA	NA
WP_002484406.1|1238008_1238221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484931.1|1238286_1240623_+	DUF3991 domain-containing protein	NA	NA	NA	NA	NA
WP_000195429.1|1241297_1242470_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_002484614.1|1243166_1244081_-	DUF4238 domain-containing protein	NA	NA	NA	NA	NA
WP_002505786.1|1244381_1245755_+	ATP-binding protein	NA	V9QJ85	Oenococcus_phage	31.9	1.5e-52
WP_002505509.1|1245806_1246301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100481713.1|1246546_1246639_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002456422.1|1246613_1247108_-|integrase	site-specific integrase	integrase	B7T092	Staphylococcus_virus	76.1	3.8e-67
WP_002456423.1|1247266_1247479_+	hypothetical protein	NA	A0A2H4JCA1	uncultured_Caudovirales_phage	72.9	7.3e-20
WP_002456424.1|1247858_1248593_-	hypothetical protein	NA	NA	NA	NA	NA
1248186:1248202	attR	TTCTTTATTATTATATT	NA	NA	NA	NA
WP_002456426.1|1249118_1249406_-	hypothetical protein	NA	A0A2H4JGN1	uncultured_Caudovirales_phage	50.0	5.5e-18
WP_002456427.1|1249567_1250233_-	hypothetical protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	41.8	7.0e-08
WP_002456428.1|1250327_1250474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154435932.1|1251483_1252908_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	63.7	1.9e-172
WP_001829851.1|1252897_1253899_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	50.2	6.9e-92
WP_001829824.1|1253895_1254147_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	81.9	1.9e-35
WP_010959198.1|1254205_1254682_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	58.1	3.3e-44
WP_002456431.1|1254668_1255454_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	71.3	2.0e-99
WP_002469572.1|1255684_1257277_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	83.6	1.6e-268
WP_001829830.1|1257646_1258846_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	85.4	4.1e-192
WP_002456434.1|1258948_1259857_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	80.6	1.8e-102
WP_002456435.1|1260036_1260873_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	68.6	6.1e-110
WP_002469577.1|1261157_1261313_+	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	79.6	5.2e-15
WP_104832471.1|1261542_1262721_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	37.0	3.7e-60
WP_002484462.1|1263199_1263553_-	CrcB family protein	NA	NA	NA	NA	NA
WP_001830726.1|1263549_1263915_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	57.0	4.1e-34
WP_002446728.1|1263951_1264260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002484454.1|1264536_1265250_+	transaldolase	NA	M1PR54	Cyanophage	37.4	7.0e-22
WP_002467846.1|1265389_1265833_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	43.5	4.1e-20
WP_154435934.1|1265870_1266263_-	competence protein ComK	NA	NA	NA	NA	NA
WP_002484457.1|1266268_1266748_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	42.9	9.1e-26
WP_010959195.1|1266803_1266923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002456441.1|1266955_1267171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001830727.1|1267548_1268400_+	autolysin	NA	A0A1J0MFB0	Staphylococcus_phage	35.6	1.0e-32
WP_011082717.1|1268738_1270232_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	65.6	2.5e-13
WP_002494782.1|1270667_1271711_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	66.8	8.9e-135
WP_002467848.1|1271717_1272350_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	77.6	1.1e-87
WP_002484458.1|1272362_1273544_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	75.8	5.7e-178
WP_002456446.1|1273556_1274018_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	84.2	1.2e-59
WP_154435936.1|1274246_1275275_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	69.7	5.9e-131
WP_002484455.1|1275517_1276345_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001830894.1|1277473_1278037_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	66.5	1.9e-67
WP_001830802.1|1278033_1278987_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	84.7	3.3e-67
WP_001830884.1|1279093_1280308_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	83.7	4.6e-183
WP_002497663.1|1280599_1283014_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	87.3	0.0e+00
WP_001830891.1|1283039_1283351_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	71.8	4.1e-35
WP_154435938.1|1283755_1294834_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	25.3	4.9e-29
>prophage 6
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	1776185	1806839	2737464	terminase,head,capsid,integrase,tail,protease,portal,holin	Staphylococcus_phage(51.72%)	41	1775877:1775936	1806914:1807036
1775877:1775936	attL	AAAAAAGAAGCTAAGGCAAAATGCCTTAACTCCTTACCCCTATTAGGTTTCCCCTGAAAT	NA	NA	NA	NA
WP_002457563.1|1776185_1776398_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	62.3	6.4e-16
WP_002484791.1|1776787_1777519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002458418.1|1777525_1778299_-	hypothetical protein	NA	Q4ZAU0	Staphylococcus_virus	41.4	2.8e-48
WP_002458419.1|1778477_1779395_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JNM6	Staphylococcus_phage	56.1	5.0e-65
WP_002484783.1|1779434_1779830_-|holin	phage holin family protein	holin	A0A1S6KVE0	Staphylococcus_phage	37.9	1.7e-17
WP_002484785.1|1779853_1781131_-	DUF2479 domain-containing protein	NA	A0A1J0MFQ3	Staphylococcus_phage	52.2	1.8e-124
WP_002458423.1|1781148_1782165_-	SGNH/GDSL hydrolase family protein	NA	A0A1J0MFI8	Staphylococcus_phage	56.0	1.9e-97
WP_002458424.1|1782177_1782774_-	hypothetical protein	NA	A0A1J0MFD6	Staphylococcus_phage	49.1	5.8e-54
WP_002484790.1|1782757_1782979_-	hypothetical protein	NA	A0A1J0MF94	Staphylococcus_phage	64.1	9.7e-07
WP_002458425.1|1782965_1784144_-	hypothetical protein	NA	A0A1W6JQ67	Staphylococcus_phage	32.1	2.2e-60
WP_002458426.1|1784156_1784981_-|tail	phage tail family protein	tail	A0A1D6Z283	Staphylococcus_phage	37.6	2.1e-46
WP_100481644.1|1784982_1789473_-|tail	phage tail tape measure protein	tail	A0A075M036	Staphylococcus_phage	46.9	9.6e-218
WP_002484788.1|1789645_1789996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002458430.1|1790019_1790679_-|tail	tail protein	tail	A0A059T7Y4	Listeria_phage	39.6	5.6e-26
WP_002484779.1|1790690_1791080_-	hypothetical protein	NA	Q4ZCL5	Staphylococcus_virus	38.4	9.1e-16
WP_002484776.1|1791076_1791490_-	hypothetical protein	NA	A0A059T5F3	Listeria_phage	39.8	7.9e-18
WP_012084000.1|1791489_1791834_-|head	phage head closure protein	head	G4KNQ4	Staphylococcus_phage	31.1	2.5e-09
WP_002458433.1|1791838_1792177_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_002458434.1|1792186_1792474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002458435.1|1792487_1793738_-|capsid	phage major capsid protein	capsid	R9TQG7	Paenibacillus_phage	37.8	2.5e-67
WP_002484782.1|1793730_1794375_-|head,protease	HK97 family phage prohead protease	head,protease	V5USG3	Enterococcus_phage	38.5	9.1e-21
WP_002458436.1|1794364_1795591_-|portal	phage portal protein	portal	A0A290G4I4	Caldibacillus_phage	40.1	1.6e-58
WP_002458437.1|1795605_1797321_-|terminase	terminase large subunit	terminase	A0A290GJW3	Caldibacillus_phage	60.1	1.7e-207
WP_002458438.1|1797313_1797715_-	hypothetical protein	NA	R9TQ46	Paenibacillus_phage	59.3	1.4e-27
WP_002458439.1|1797835_1798192_-	HNH endonuclease	NA	A0A2K9VBV6	Staphylococcus_phage	53.6	1.3e-21
WP_002458440.1|1798246_1799089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002484781.1|1799116_1799617_-	positive control factor	NA	A0A0S2MVE1	Bacillus_phage	31.2	3.5e-12
WP_002457319.1|1799791_1800016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002457320.1|1800686_1800986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002504544.1|1801036_1801384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002457322.1|1801389_1802292_-	DnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	52.8	2.5e-53
WP_002457323.1|1802321_1802717_-	single-stranded DNA-binding protein	NA	Q4ZAD5	Staphylococcus_virus	51.4	4.1e-32
WP_002457324.1|1802730_1802997_-	hypothetical protein	NA	A0A2H4JAK6	uncultured_Caudovirales_phage	57.1	6.2e-16
WP_002457325.1|1803059_1803251_-	DUF1270 family protein	NA	NA	NA	NA	NA
WP_002457326.1|1803265_1803475_-	hypothetical protein	NA	A0A2H4JFX1	uncultured_Caudovirales_phage	68.1	1.3e-21
WP_002457327.1|1803540_1803744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002457330.1|1804073_1804352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002457331.1|1804379_1804616_-	DUF739 family protein	NA	A0A2I6PDH8	Staphylococcus_phage	83.3	8.7e-30
WP_002457332.1|1804780_1805131_+	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	50.0	3.4e-22
WP_002457333.1|1805300_1805672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002457334.1|1805714_1806839_+|integrase	site-specific integrase	integrase	A0A0C5AN64	Paenibacillus_phage	29.0	1.9e-34
1806914:1807036	attR	AAAAAAGAAGCTAAGGCAAAATGCCTTAACTCCTTACCCCTATTAGGTTTCCCCTGAAATTGTTTAGCGCTTAGTATTGCTTAATATACTGTTCTCTTTCCCATTCGGATACTTGAGTTCTAT	NA	NA	NA	NA
>prophage 7
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	2044767	2053237	2737464		Synechococcus_phage(33.33%)	9	NA	NA
WP_001831672.1|2044767_2045334_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.0	6.1e-29
WP_002504799.1|2045333_2046365_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.4	2.8e-64
WP_001831721.1|2046357_2047842_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.9	9.4e-45
WP_001831715.1|2047820_2050010_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.4	8.7e-140
WP_001831727.1|2050002_2050674_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_001831728.1|2050675_2050936_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_001831723.1|2050935_2051640_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	H8ZMN3	Synechococcus_phage	42.5	1.6e-47
WP_001831674.1|2051640_2052768_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_001831735.1|2052754_2053237_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	43.3	5.2e-21
>prophage 8
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	2084575	2127517	2737464	terminase,head,capsid,integrase,tail,protease,portal,holin	uncultured_Caudovirales_phage(62.86%)	70	2082854:2082870	2135612:2135628
2082854:2082870	attL	GTTTTTTGTTTATAACT	NA	NA	NA	NA
WP_049375131.1|2084575_2085970_-	hypothetical protein	NA	A0A1W6JPH3	Staphylococcus_phage	36.5	9.7e-60
WP_053093279.1|2086070_2087489_-	CHAP domain-containing protein	NA	A0A2R3ZXN5	Staphylococcus_phage	62.3	1.5e-103
WP_064586278.1|2087460_2087940_-|holin	phage holin	holin	U3PJ27	Staphylococcus_phage	60.6	3.8e-40
WP_100481675.1|2087999_2088398_-	YxeA family protein	NA	A0A2H4JEL3	uncultured_Caudovirales_phage	95.5	1.0e-62
WP_100481676.1|2088545_2088953_-	hypothetical protein	NA	A0A2H4JCJ5	uncultured_Caudovirales_phage	96.3	5.3e-67
WP_002456415.1|2088939_2089365_-	hypothetical protein	NA	A0A2H4JA87	uncultured_Caudovirales_phage	99.3	5.2e-73
WP_002500089.1|2089361_2089985_-	hypothetical protein	NA	A0A2H4JCU6	uncultured_Caudovirales_phage	99.0	3.3e-116
WP_100481677.1|2089989_2091204_-	DUF2479 domain-containing protein	NA	A0A2H4JA98	uncultured_Caudovirales_phage	98.5	1.4e-203
WP_100481678.1|2091203_2093066_-	DUF2817 domain-containing protein	NA	A0A2H4IYE0	uncultured_Caudovirales_phage	99.4	0.0e+00
WP_032603576.1|2093247_2094816_-	peptidase	NA	H9A128	Staphylococcus_phage	98.7	7.8e-300
WP_002468177.1|2094816_2095650_-|tail	phage tail family protein	tail	A0A2H4J498	uncultured_Caudovirales_phage	100.0	2.8e-163
WP_154435976.1|2095651_2100379_-|tail	phage tail tape measure protein	tail	A0A2H4JBT3	uncultured_Caudovirales_phage	95.2	0.0e+00
WP_002456407.1|2100407_2100560_-	hypothetical protein	NA	H9A123	Staphylococcus_phage	100.0	1.8e-20
WP_002504164.1|2100592_2100955_-	hypothetical protein	NA	H9A122	Staphylococcus_phage	100.0	3.3e-60
WP_100481680.1|2101018_2101204_-	hypothetical protein	NA	A0A2H4J420	uncultured_Caudovirales_phage	98.4	1.3e-25
WP_100481681.1|2101222_2101852_-|tail	phage tail protein	tail	A0A2H4JCT8	uncultured_Caudovirales_phage	100.0	4.0e-114
WP_100481682.1|2101864_2102269_-	hypothetical protein	NA	A0A2H4J7K9	uncultured_Caudovirales_phage	96.3	1.9e-69
WP_080356004.1|2102271_2102538_-	hypothetical protein	NA	A0A2H4JFJ4	uncultured_Caudovirales_phage	100.0	2.4e-44
WP_100481683.1|2102672_2103002_-	hypothetical protein	NA	H9A117	Staphylococcus_phage	98.2	3.6e-58
WP_070840824.1|2102991_2103333_-|head,tail	phage gp6-like head-tail connector protein	head,tail	H9A116	Staphylococcus_phage	99.1	3.2e-57
WP_100481684.1|2103351_2104686_-|capsid	phage major capsid protein	capsid	A0A2H4J4F8	uncultured_Caudovirales_phage	97.1	1.7e-191
WP_070731393.1|2104726_2105284_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JBY8	uncultured_Caudovirales_phage	97.8	7.7e-101
WP_100481685.1|2105273_2106506_-|portal	phage portal protein	portal	A0A2H4JCP4	uncultured_Caudovirales_phage	99.3	1.9e-232
WP_154435978.1|2106492_2106702_-	hypothetical protein	NA	A0A2H4J9T6	uncultured_Caudovirales_phage	100.0	2.4e-23
WP_100481686.1|2106713_2108465_-|terminase	terminase large subunit	terminase	H9A111	Staphylococcus_phage	96.9	0.0e+00
WP_002504173.1|2108457_2108928_-|terminase	phage terminase small subunit P27 family	terminase	H9A110	Staphylococcus_phage	100.0	2.7e-83
WP_100481687.1|2109071_2109422_-	HNH endonuclease	NA	A0A2H4J8X0	uncultured_Caudovirales_phage	94.8	7.0e-60
WP_002500106.1|2110016_2110463_-	transcriptional regulator	NA	A0A0N7GFI1	Staphylococcus_phage	99.3	1.6e-80
WP_002500107.1|2110479_2110629_-	DUF1514 domain-containing protein	NA	A0A0N9S034	Staphylococcus_phage	100.0	1.2e-16
WP_100481688.1|2110628_2110796_-	regulator	NA	A0A0N9SKK8	Staphylococcus_phage	98.2	1.3e-24
WP_100481689.1|2110798_2110999_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	84.4	1.9e-22
WP_100481690.1|2111014_2111224_-	DUF1381 domain-containing protein	NA	A0A2H4J2G4	uncultured_Caudovirales_phage	71.0	1.6e-19
WP_100481691.1|2111223_2111481_-	hypothetical protein	NA	A0A2H4J9D4	uncultured_Caudovirales_phage	96.5	7.0e-41
WP_100481692.1|2111495_2111699_-	hypothetical protein	NA	A0A0D3MVJ6	Staphylococcus_phage	97.0	9.8e-30
WP_002469479.1|2111735_2112278_-	dUTP pyrophosphatase	NA	I6SB33	Staphylococcus_virus	96.7	2.6e-93
WP_002469472.1|2112270_2112450_-	DUF1024 family protein	NA	A0A141VTT1	Staphylococcus_phage	96.6	4.4e-26
WP_002469448.1|2112439_2112667_-	hypothetical protein	NA	A0A2H4J7L0	uncultured_Caudovirales_phage	89.3	4.4e-31
WP_002469449.1|2112673_2112931_-	hypothetical protein	NA	A0A2H4J5D3	uncultured_Caudovirales_phage	90.5	8.6e-15
WP_002497592.1|2112931_2113384_-	TIGR01671 domain-containing protein	NA	A0A060ABA9	Staphylococcus_phage	98.0	1.8e-79
WP_002469488.1|2113376_2113766_-	hypothetical protein	NA	A1BU02	Staphylococcus_virus	25.9	1.1e-05
WP_002469474.1|2113784_2113964_-	hypothetical protein	NA	A0A2H4J7I6	uncultured_Caudovirales_phage	93.2	5.4e-24
WP_002497591.1|2113950_2114148_-	hypothetical protein	NA	A0A1W6JQJ2	Staphylococcus_phage	87.7	1.2e-24
WP_100481693.1|2114144_2114825_-	hypothetical protein	NA	A0A2H4J4C6	uncultured_Caudovirales_phage	96.0	9.0e-128
WP_002484753.1|2114840_2115128_-	hypothetical protein	NA	A0A1W6JPD4	Staphylococcus_phage	98.9	2.1e-46
WP_002484724.1|2115117_2115570_-	DUF3310 domain-containing protein	NA	A0A1W6JPA2	Staphylococcus_phage	100.0	1.9e-81
WP_002484760.1|2115566_2115926_-	hypothetical protein	NA	A0A1W6JPB9	Staphylococcus_phage	96.6	3.8e-61
WP_002484773.1|2115926_2116118_-	hypothetical protein	NA	A0A2H4JE06	uncultured_Caudovirales_phage	96.8	1.2e-26
WP_002484718.1|2116117_2116492_-	hypothetical protein	NA	A0A2H4JFL4	uncultured_Caudovirales_phage	99.2	3.3e-63
WP_002504785.1|2116478_2116895_-	DUF1064 domain-containing protein	NA	A0A2H4J4B5	uncultured_Caudovirales_phage	99.3	1.9e-75
WP_002456377.1|2116905_2117130_-	DUF3269 family protein	NA	A0A2H4J7T2	uncultured_Caudovirales_phage	100.0	3.2e-34
WP_002504786.1|2117098_2117329_-	hypothetical protein	NA	A0A2H4J4C5	uncultured_Caudovirales_phage	100.0	1.1e-37
WP_002504787.1|2117325_2118573_-	AAA family ATPase	NA	A0A2H4J440	uncultured_Caudovirales_phage	99.5	2.3e-230
WP_002504788.1|2118562_2118916_-	hypothetical protein	NA	A0A2H4J445	uncultured_Caudovirales_phage	100.0	1.2e-51
WP_002504789.1|2118921_2119650_-	DnaD domain protein	NA	A0A2H4JC54	uncultured_Caudovirales_phage	97.9	4.5e-109
WP_002504790.1|2119636_2119852_-	helix-turn-helix transcriptional regulator	NA	Q4ZC20	Staphylococcus_virus	77.9	5.5e-23
WP_002504791.1|2119857_2120088_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J4G1	uncultured_Caudovirales_phage	98.7	6.1e-36
WP_002504792.1|2120065_2120755_-	hypothetical protein	NA	A0A2H4J4H1	uncultured_Caudovirales_phage	98.3	3.0e-131
WP_002497586.1|2120768_2121185_-	single-stranded DNA-binding protein	NA	A0A2H4J3J7	uncultured_Caudovirales_phage	99.3	4.3e-72
WP_064658663.1|2121184_2121832_-	single-stranded DNA-binding protein	NA	A0A2H4J7J4	uncultured_Caudovirales_phage	99.5	1.8e-117
WP_002495408.1|2121824_2122052_-	DUF2483 domain-containing protein	NA	H9A0Y6	Staphylococcus_phage	88.0	4.2e-29
WP_100481694.1|2122023_2122299_-	chordopoxvirus fusion protein	NA	A0A2H4J6V3	uncultured_Caudovirales_phage	100.0	5.1e-13
WP_002484728.1|2122624_2122903_+	hypothetical protein	NA	A0A2H4JB42	uncultured_Caudovirales_phage	100.0	1.7e-48
WP_001830281.1|2123049_2123259_-	hypothetical protein	NA	A0A2H4J7I0	uncultured_Caudovirales_phage	100.0	9.7e-33
WP_002504197.1|2123271_2124012_-	phage repressor protein	NA	A0A2H4J436	uncultured_Caudovirales_phage	97.6	2.0e-133
WP_002504198.1|2124061_2124286_+	hypothetical protein	NA	A0A2H4JDC2	uncultured_Caudovirales_phage	98.6	1.5e-34
WP_100481695.1|2124462_2124675_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J3K6	uncultured_Caudovirales_phage	98.6	1.9e-31
WP_002504199.1|2124827_2125142_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JCJ2	uncultured_Caudovirales_phage	100.0	9.8e-53
WP_002504200.1|2125163_2125622_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4J5R5	uncultured_Caudovirales_phage	100.0	2.8e-85
WP_002504201.1|2125639_2126308_+	hypothetical protein	NA	A0A2H4J6W0	uncultured_Caudovirales_phage	100.0	2.5e-66
WP_100481696.1|2126467_2127517_+|integrase	site-specific integrase	integrase	I6SMN0	Staphylococcus_virus	99.7	9.8e-198
2135612:2135628	attR	GTTTTTTGTTTATAACT	NA	NA	NA	NA
>prophage 9
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	2329241	2343062	2737464	transposase	uncultured_Caudovirales_phage(60.0%)	13	NA	NA
WP_001105991.1|2329241_2329916_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9SKD3	Staphylococcus_phage	99.6	6.8e-128
WP_002484625.1|2330088_2331021_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_002484624.1|2331042_2331357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001829596.1|2332628_2333408_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	33.6	5.1e-18
WP_002438903.1|2333404_2334364_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	100.0	4.1e-17
WP_002438902.1|2334347_2335322_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	99.7	5.9e-165
WP_002456931.1|2335337_2335601_-	hypothetical protein	NA	A0A2H4IYB4	uncultured_Caudovirales_phage	100.0	5.5e-17
WP_002503605.1|2335575_2336544_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	99.7	2.5e-184
WP_001829582.1|2336662_2338768_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	100.0	0.0e+00
WP_001829589.1|2338730_2339129_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	100.0	2.0e-71
WP_001829684.1|2339883_2340759_+	DMT family transporter	NA	NA	NA	NA	NA
WP_001832596.1|2340772_2341273_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.1	1.1e-50
WP_002438897.1|2341556_2343062_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.0	5.5e-61
>prophage 10
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	2737464	2364490	2375026	2737464		Staphylococcus_phage(22.22%)	15	NA	NA
WP_001830323.1|2364490_2365642_-	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	39.6	7.5e-26
WP_001830349.1|2365631_2366219_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001830328.1|2366515_2367187_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.7	4.1e-64
WP_001830341.1|2367191_2367611_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_001830330.1|2367611_2368325_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	44.8	1.6e-55
WP_001830331.1|2368427_2369027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001830315.1|2369376_2369532_+	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	75.5	9.8e-14
WP_010959136.1|2369623_2369722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001830329.1|2370127_2370565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001830332.1|2370615_2371089_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001830352.1|2371063_2371753_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	3.4e-34
WP_002438881.1|2371842_2372808_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.6	1.8e-17
WP_001830351.1|2372877_2373984_-	glycosyltransferase family 2 protein	NA	A8CG95	Salmonella_phage	43.2	6.3e-62
WP_011082622.1|2373952_2374045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001830355.1|2374186_2375026_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	43.0	1.2e-60
