The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044328	Methylocystis rosea strain BRCS1 chromosome, complete genome	3386331	251153	259758	3386331	tRNA	uncultured_Mediterranean_phage(66.67%)	10	NA	NA
WP_154450709.1|251153_252533_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	36.6	7.2e-15
WP_154450710.1|252647_253337_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1J0MC50	Streptomyces_phage	30.3	3.6e-07
WP_154450711.1|253333_254107_-	5'/3'-nucleotidase SurE	NA	NA	NA	NA	NA
WP_154450712.1|254187_254739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154450713.1|254676_256101_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.3	1.0e-104
WP_154450714.1|256322_257117_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	44.8	2.0e-49
WP_154450715.1|257113_257617_-	preprotein translocase subunit TatA	NA	NA	NA	NA	NA
WP_018408165.1|257768_258005_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_154450716.1|258171_258927_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	45.1	1.4e-44
WP_154450717.1|258951_259758_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	35.8	1.3e-32
>prophage 2
NZ_CP044328	Methylocystis rosea strain BRCS1 chromosome, complete genome	3386331	1177067	1190706	3386331	protease,head,tail,capsid	Paracoccus_phage(44.44%)	15	NA	NA
WP_154451340.1|1177067_1177670_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	50.7	5.3e-31
WP_154451341.1|1177824_1179051_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	40.4	1.2e-77
WP_154451342.1|1179121_1179697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154451343.1|1179693_1180023_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_154451344.1|1180033_1180441_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_154451345.1|1180453_1180861_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_154451346.1|1181031_1181388_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_083481301.1|1181450_1181624_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_154451347.1|1181620_1182214_+|tail	phage tail tape measure protein	tail	K7RVL7	Vibrio_phage	42.1	4.0e-07
WP_154451348.1|1182228_1182867_+	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	51.4	1.2e-52
WP_154451349.1|1182988_1183879_+	DUF2163 domain-containing protein	NA	A0A1V0DY93	Dinoroseobacter_phage	43.2	5.1e-62
WP_154451350.1|1183875_1184307_+	peptidase P60	NA	F4YXU4	Roseobacter_phage	44.5	2.5e-27
WP_154451351.1|1184444_1188323_+	hypothetical protein	NA	A0A0B5A7K5	Paracoccus_phage	40.1	7.0e-225
WP_154451352.1|1188331_1189927_+	DUF2793 domain-containing protein	NA	A0A0B5A0F6	Paracoccus_phage	36.9	9.5e-27
WP_109025658.1|1190094_1190706_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	46.0	1.3e-32
>prophage 3
NZ_CP044328	Methylocystis rosea strain BRCS1 chromosome, complete genome	3386331	1444696	1476605	3386331	capsid,integrase,plate,tail	Ochrobactrum_phage(47.37%)	41	1459394:1459420	1467244:1467270
WP_154451526.1|1444696_1444903_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_154451528.1|1444899_1445313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451530.1|1445315_1447508_-|tail	phage tail tape measure protein	tail	A0A2H4J8X5	uncultured_Caudovirales_phage	25.8	1.9e-09
WP_154451532.1|1447568_1447712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451534.1|1447756_1448200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451536.1|1448196_1448727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451538.1|1448751_1450026_-	hypothetical protein	NA	A0A219VHA7	Ochrobactrum_phage	35.0	3.2e-49
WP_154451540.1|1450138_1451827_-	hypothetical protein	NA	A0A097PBE3	Delftia_phage	42.3	3.3e-62
WP_154451542.1|1451828_1452311_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154453768.1|1452307_1453531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451544.1|1453629_1454223_-	DUF4376 domain-containing protein	NA	A0A1S5R1J2	Pseudomonas_phage	46.2	8.1e-16
WP_124739756.1|1455336_1455540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451546.1|1455551_1457819_-	hypothetical protein	NA	A0A0A8ILB4	Aurantimonas_phage	40.9	2.2e-154
WP_154451548.1|1457820_1458468_-|tail	phage tail protein I	tail	A0A0A8IL57	Aurantimonas_phage	41.1	2.3e-40
WP_154451550.1|1458464_1459391_-|plate	baseplate assembly protein	plate	A0A0A8IKZ9	Aurantimonas_phage	51.3	1.1e-75
1459394:1459420	attL	CGCGCCGCCGATGTTTCGAGCGGCGCG	NA	NA	NA	NA
WP_124739752.1|1459461_1459860_-|integrase	integrase	integrase	A0A219VH96	Ochrobactrum_phage	29.8	3.0e-06
WP_154451552.1|1459871_1460105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451554.1|1460116_1460773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451556.1|1460769_1461291_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451558.1|1461287_1461773_-	phage morphogenesis protein	NA	A0A1B0T6K4	Pelagibaca_phage	31.4	2.7e-09
WP_154453769.1|1461772_1462240_-	DUF1320 domain-containing protein	NA	NA	NA	NA	NA
WP_154451560.1|1462239_1462473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451562.1|1462645_1462888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451564.1|1462896_1463859_-|capsid	capsid protein	capsid	A0A219VH83	Ochrobactrum_phage	44.4	1.1e-70
WP_154451566.1|1463882_1464263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451568.1|1464293_1465247_-	hypothetical protein	NA	A0A219VH76	Ochrobactrum_phage	30.7	8.4e-31
WP_154451570.1|1465636_1466848_-	hypothetical protein	NA	A0A219VH74	Ochrobactrum_phage	37.8	2.2e-68
WP_154451572.1|1466847_1468524_-	DUF935 family protein	NA	A0A219VH73	Ochrobactrum_phage	40.6	1.5e-99
1467244:1467270	attR	CGCGCCGCTCGAAACATCGGCGGCGCG	NA	NA	NA	NA
WP_154451574.1|1470139_1470718_-	DUF3486 family protein	NA	A0A219VH75	Ochrobactrum_phage	32.0	2.7e-16
WP_154451576.1|1470719_1471019_-	hypothetical protein	NA	M4SPS4	Rhodobacter_phage	46.9	6.3e-17
WP_124739737.1|1471015_1471417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451578.1|1471654_1472296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451580.1|1472392_1473463_-	hypothetical protein	NA	A0A1W6DX33	Sphingobium_phage	41.7	6.1e-30
WP_154451582.1|1473459_1473960_-	septal ring lytic transglycosylase RlpA family protein	NA	NA	NA	NA	NA
WP_154451584.1|1474031_1474448_-	hypothetical protein	NA	A0A219VHE2	Ochrobactrum_phage	40.5	4.2e-19
WP_154451586.1|1474510_1474732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451588.1|1474728_1474989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451590.1|1474988_1475690_-	DUF1018 domain-containing protein	NA	A0A219VHC6	Ochrobactrum_phage	42.7	7.1e-19
WP_154451592.1|1475686_1475881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451594.1|1475877_1476075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154451596.1|1476071_1476605_-	host-nuclease inhibitor protein Gam	NA	L7P7S4	Pseudomonas_phage	43.5	5.9e-34
>prophage 1
NZ_CP044330	Methylocystis rosea strain BRCS1 plasmid unnamed2, complete sequence	213640	13469	76578	213640	transposase,integrase	Stx2-converting_phage(18.18%)	43	34905:34921	75648:75664
WP_109026981.1|13469_15017_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	47.8	1.3e-129
WP_109026914.1|15757_15970_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_109026913.1|16650_18942_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.3	2.1e-83
WP_154454015.1|19608_22770_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA	NA
WP_124740575.1|22766_24191_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_124740574.1|24187_25435_-	TolC family protein	NA	NA	NA	NA	NA
WP_109026978.1|25431_25836_-	FixH family protein	NA	NA	NA	NA	NA
WP_109026905.1|29439_30186_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.2	5.8e-35
WP_109026904.1|30187_31321_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_109026903.1|31317_32568_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_109026902.1|32856_33510_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_109026901.1|34004_34574_+	hypothetical protein	NA	NA	NA	NA	NA
34905:34921	attL	GGCGGAGAGGATCGAGC	NA	NA	NA	NA
WP_154454016.1|35781_35946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124740573.1|35962_36511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109026898.1|37128_38238_+	YncE family protein	NA	NA	NA	NA	NA
WP_109026976.1|38645_39227_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_109026897.1|39248_39494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109026896.1|39660_40584_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_109026973.1|40630_42454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109026895.1|42645_43251_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	41.8	2.3e-42
WP_109026894.1|43494_43662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109026893.1|46065_46464_+	SirB2 family protein	NA	NA	NA	NA	NA
WP_109026892.1|46506_47715_-	NnrS family protein	NA	NA	NA	NA	NA
WP_109026971.1|50033_50747_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_109026890.1|50967_51660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109026889.1|52166_52694_-	DUF488 domain-containing protein	NA	A0A2K9L455	Tupanvirus	38.8	2.3e-22
WP_109026888.1|52706_52916_-	DUF2945 domain-containing protein	NA	NA	NA	NA	NA
WP_109026887.1|53985_55569_+	MFS transporter	NA	NA	NA	NA	NA
WP_109026886.1|57792_58764_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_109026885.1|59168_60302_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_109026884.1|60312_63456_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.6	5.9e-73
WP_109026883.1|63542_64829_+	TolC family protein	NA	NA	NA	NA	NA
WP_109026882.1|65140_65704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124740571.1|65775_66660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740570.1|66656_67538_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_124740569.1|67527_69189_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_154454017.1|69286_69460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740568.1|70404_70737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124740567.1|70754_71174_-	universal stress protein	NA	A0A1W6JNV4	Morganella_phage	37.3	4.5e-13
WP_154453168.1|72503_73955_-|transposase	IS4 family transposase	transposase	Q9JMP3	Wolbachia_phage	32.8	1.6e-65
WP_124740565.1|74147_74525_+|transposase	transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	46.6	7.0e-05
WP_124740564.1|74521_74869_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	55.7	4.4e-30
WP_154454018.1|74967_76578_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	41.1	2.2e-100
75648:75664	attR	GCTCGATCCTCTCCGCC	NA	NA	NA	NA
