assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009708235.1_ASM970823v1	NZ_CP038811	Piscirickettsia salmonis strain Psal-001 chromosome, complete genome	1	363129-363258	1	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,csa3	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	59	363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212|363175-363212	NZ_CP038812.1_78299-78262|NZ_CP038812.1_84923-84886|NZ_CP038812.1_55526-55563|NZ_CP038812.1_69445-69482|NZ_CP038812.1_117528-117565|NZ_CP038811.1_155094-155057|NZ_CP038811.1_256590-256553|NZ_CP038811.1_712877-712840|NZ_CP038811.1_768535-768498|NZ_CP038811.1_770687-770650|NZ_CP038811.1_866115-866078|NZ_CP038811.1_909742-909705|NZ_CP038811.1_964652-964615|NZ_CP038811.1_965769-965732|NZ_CP038811.1_992366-992329|NZ_CP038811.1_1025423-1025386|NZ_CP038811.1_1083912-1083875|NZ_CP038811.1_1197485-1197448|NZ_CP038811.1_1221632-1221595|NZ_CP038811.1_1255960-1255923|NZ_CP038811.1_1259466-1259429|NZ_CP038811.1_1576021-1575984|NZ_CP038811.1_1581595-1581558|NZ_CP038811.1_1672159-1672122|NZ_CP038811.1_1686523-1686486|NZ_CP038811.1_1718585-1718548|NZ_CP038811.1_1763415-1763378|NZ_CP038811.1_1920986-1920949|NZ_CP038811.1_2031544-2031507|NZ_CP038811.1_2320463-2320426|NZ_CP038811.1_2682478-2682441|NZ_CP038811.1_46479-46516|NZ_CP038811.1_157364-157401|NZ_CP038811.1_178806-178843|NZ_CP038811.1_183188-183225|NZ_CP038811.1_225980-226017|NZ_CP038811.1_461919-461956|NZ_CP038811.1_547813-547850|NZ_CP038811.1_667309-667346|NZ_CP038811.1_856312-856349|NZ_CP038811.1_893091-893128|NZ_CP038811.1_996662-996699|NZ_CP038811.1_1531012-1531049|NZ_CP038811.1_1801850-1801887|NZ_CP038811.1_1801984-1802021|NZ_CP038811.1_2102196-2102233|NZ_CP038811.1_2111497-2111534|NZ_CP038811.1_2193386-2193423|NZ_CP038811.1_2225260-2225297|NZ_CP038811.1_2234128-2234165|NZ_CP038811.1_2323678-2323715|NZ_CP038811.1_2776914-2776951|NZ_CP038811.1_2780740-2780777|NZ_CP038811.1_2983050-2983087|NZ_CP038811.1_1083778-1083741|NZ_CP038811.1_352922-352959|NZ_CP038811.1_1073733-1073770|NZ_CP038811.1_2225394-2225431|NZ_CP038813.1_5737-5774	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|73aa|up_9|NZ_CP038811.1_353631_353850_-,NA|65aa|up_5|NZ_CP038811.1_357831_358026_-,NA|141aa|up_3|NZ_CP038811.1_359348_359771_+,NA|105aa|up_0|NZ_CP038811.1_361907_362222_-,NA|97aa|down_0|NZ_CP038811.1_363787_364078_+,NA|233aa|down_1|NZ_CP038811.1_364115_364814_+,NA|99aa|down_2|NZ_CP038811.1_364830_365127_+,NA|384aa|down_3|NZ_CP038811.1_365244_366396_+,NA|192aa|down_4|NZ_CP038811.1_366668_367244_+	NA|73aa|up_9|NZ_CP038811.1_353631_353850_-	NA	NA|325aa|up_8|NZ_CP038811.1_354217_355192_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|85aa|up_7|NZ_CP038811.1_355730_355985_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP038811.1_356707_357694_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP038811.1_357831_358026_-	NA	NA|215aa|up_4|NZ_CP038811.1_358711_359356_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|141aa|up_3|NZ_CP038811.1_359348_359771_+	NA	NA|468aa|up_2|NZ_CP038811.1_359932_361336_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_1|NZ_CP038811.1_361386_361962_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_0|NZ_CP038811.1_361907_362222_-	NA	NA|97aa|down_0|NZ_CP038811.1_363787_364078_+	NA	NA|233aa|down_1|NZ_CP038811.1_364115_364814_+	NA	NA|99aa|down_2|NZ_CP038811.1_364830_365127_+	NA	NA|384aa|down_3|NZ_CP038811.1_365244_366396_+	NA	NA|192aa|down_4|NZ_CP038811.1_366668_367244_+	NA	NA|278aa|down_5|NZ_CP038811.1_367301_368135_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_6|NZ_CP038811.1_368250_369435_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_7|NZ_CP038811.1_369453_370398_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_8|NZ_CP038811.1_370702_371488_+	TIGR03545, TIGR03545, TIGR03545 family protein	NA|123aa|down_9|NZ_CP038811.1_371605_371974_-	COG3603, COG3603, Uncharacterized conserved protein [Function unknown]
GCF_009708235.1_ASM970823v1	NZ_CP038811	Piscirickettsia salmonis strain Psal-001 chromosome, complete genome	2	2600770-2600890	2	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,csa3	Orphan	TTGATTAAGTCCAAGGGCTGCTAACCATTGATAAGCT	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|158aa|up_9|NZ_CP038811.1_2591288_2591762_-,NA|70aa|up_6|NZ_CP038811.1_2595994_2596204_+,NA|172aa|up_3|NZ_CP038811.1_2598256_2598772_+,NA|88aa|up_2|NZ_CP038811.1_2599004_2599268_+,NA|137aa|up_1|NZ_CP038811.1_2599536_2599947_+,NA|141aa|up_0|NZ_CP038811.1_2600190_2600613_-,NA	NA|158aa|up_9|NZ_CP038811.1_2591288_2591762_-	NA	NA|420aa|up_8|NZ_CP038811.1_2591894_2593154_+	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|694aa|up_7|NZ_CP038811.1_2593609_2595691_+	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|70aa|up_6|NZ_CP038811.1_2595994_2596204_+	NA	NA|325aa|up_5|NZ_CP038811.1_2596279_2597254_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|211aa|up_4|NZ_CP038811.1_2597479_2598112_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|172aa|up_3|NZ_CP038811.1_2598256_2598772_+	NA	NA|88aa|up_2|NZ_CP038811.1_2599004_2599268_+	NA	NA|137aa|up_1|NZ_CP038811.1_2599536_2599947_+	NA	NA|141aa|up_0|NZ_CP038811.1_2600190_2600613_-	NA	NA|192aa|down_0|NZ_CP038811.1_2602267_2602843_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|160aa|down_1|NZ_CP038811.1_2602788_2603268_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|132aa|down_2|NZ_CP038811.1_2604125_2604521_+	pfam17775, UPF0225, UPF0225 domain	NA|265aa|down_3|NZ_CP038811.1_2604517_2605312_-	pfam01863, DUF45, Protein of unknown function DUF45	NA|242aa|down_4|NZ_CP038811.1_2605490_2606216_-	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|396aa|down_5|NZ_CP038811.1_2606461_2607649_+	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|376aa|down_6|NZ_CP038811.1_2608003_2609131_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|181aa|down_7|NZ_CP038811.1_2609461_2610004_-	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|229aa|down_8|NZ_CP038811.1_2610000_2610687_-	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|204aa|down_9|NZ_CP038811.1_2610690_2611302_-	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase
GCF_009708235.1_ASM970823v1	NZ_CP038812	Piscirickettsia salmonis strain Psal-001 plasmid unnamed1, complete sequence	1	134110-134333	1	CRT	no		RT	Orphan	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	3	3	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|68aa|up_9|NZ_CP038812.1_124601_124805_+,NA|57aa|up_8|NZ_CP038812.1_124801_124972_+,NA|86aa|up_5|NZ_CP038812.1_126999_127257_-,NA|49aa|up_3|NZ_CP038812.1_129785_129932_+,NA|563aa|down_2|NZ_CP038812.1_136467_138156_-,NA|163aa|down_4|NZ_CP038812.1_139699_140188_+,NA|243aa|down_5|NZ_CP038812.1_140245_140974_+,NA|327aa|down_6|NZ_CP038812.1_141430_142411_+,NA|60aa|down_8|NZ_CP038812.1_143588_143768_+,NA|99aa|down_9|NZ_CP038812.1_143986_144283_+	NA|68aa|up_9|NZ_CP038812.1_124601_124805_+	NA	NA|57aa|up_8|NZ_CP038812.1_124801_124972_+	NA	NA|361aa|up_7|NZ_CP038812.1_125158_126241_-	pfam00665, rve, Integrase core domain	NA|167aa|up_6|NZ_CP038812.1_126397_126898_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|86aa|up_5|NZ_CP038812.1_126999_127257_-	NA	NA|396aa|up_4|NZ_CP038812.1_127325_128512_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|49aa|up_3|NZ_CP038812.1_129785_129932_+	NA	NA|272aa|up_2|NZ_CP038812.1_130261_131077_+	pfam04986, Y2_Tnp, Putative transposase	NA|197aa|up_1|NZ_CP038812.1_131322_131913_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|340aa|up_0|NZ_CP038812.1_132878_133898_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|56aa|down_0|NZ_CP038812.1_135547_135715_-	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	NA|243aa|down_1|NZ_CP038812.1_135770_136499_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|563aa|down_2|NZ_CP038812.1_136467_138156_-	NA	NA|325aa|down_3|NZ_CP038812.1_138499_139474_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|163aa|down_4|NZ_CP038812.1_139699_140188_+	NA	NA|243aa|down_5|NZ_CP038812.1_140245_140974_+	NA	NA|327aa|down_6|NZ_CP038812.1_141430_142411_+	NA	NA|243aa|down_7|NZ_CP038812.1_142556_143285_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|60aa|down_8|NZ_CP038812.1_143588_143768_+	NA	NA|99aa|down_9|NZ_CP038812.1_143986_144283_+	NA
