assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009708915.1_ASM970891v1	NZ_CP038932	Piscirickettsia salmonis strain Psal-025 chromosome, complete genome	1	363227-363356	1	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,csa3	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	59	363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310|363273-363310	NZ_CP038933.1_138176-138139|NZ_CP038933.1_144800-144763|NZ_CP038933.1_115403-115440|NZ_CP038933.1_129322-129359|NZ_CP038933.1_180456-180493|NZ_CP038932.1_155095-155058|NZ_CP038932.1_256591-256554|NZ_CP038932.1_739891-739854|NZ_CP038932.1_795561-795524|NZ_CP038932.1_797713-797676|NZ_CP038932.1_893141-893104|NZ_CP038932.1_937874-937837|NZ_CP038932.1_992785-992748|NZ_CP038932.1_993902-993865|NZ_CP038932.1_1020500-1020463|NZ_CP038932.1_1055080-1055043|NZ_CP038932.1_1113570-1113533|NZ_CP038932.1_1619141-1619104|NZ_CP038932.1_1624716-1624679|NZ_CP038932.1_1714432-1714395|NZ_CP038932.1_1728796-1728759|NZ_CP038932.1_1760859-1760822|NZ_CP038932.1_1805784-1805747|NZ_CP038932.1_1963356-1963319|NZ_CP038932.1_2073914-2073877|NZ_CP038932.1_2361598-2361561|NZ_CP038932.1_2721549-2721512|NZ_CP038932.1_46479-46516|NZ_CP038932.1_157365-157402|NZ_CP038932.1_178807-178844|NZ_CP038932.1_183189-183226|NZ_CP038932.1_225981-226018|NZ_CP038932.1_462021-462058|NZ_CP038932.1_574812-574849|NZ_CP038932.1_694323-694360|NZ_CP038932.1_883338-883375|NZ_CP038932.1_921223-921260|NZ_CP038932.1_1026318-1026355|NZ_CP038932.1_1308447-1308484|NZ_CP038932.1_1311953-1311990|NZ_CP038932.1_1346281-1346318|NZ_CP038932.1_1370429-1370466|NZ_CP038932.1_1574131-1574168|NZ_CP038932.1_1844218-1844255|NZ_CP038932.1_1844352-1844389|NZ_CP038932.1_2143334-2143371|NZ_CP038932.1_2152634-2152671|NZ_CP038932.1_2234514-2234551|NZ_CP038932.1_2266393-2266430|NZ_CP038932.1_2275263-2275300|NZ_CP038932.1_2364813-2364850|NZ_CP038932.1_2815987-2816024|NZ_CP038932.1_2819813-2819850|NZ_CP038932.1_3022123-3022160|NZ_CP038932.1_1113436-1113399|NZ_CP038932.1_353020-353057|NZ_CP038932.1_1103391-1103428|NZ_CP038932.1_2266527-2266564|NZ_CP038934.1_5737-5774	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|73aa|up_9|NZ_CP038932.1_353729_353948_-,NA|65aa|up_5|NZ_CP038932.1_357929_358124_-,NA|141aa|up_3|NZ_CP038932.1_359446_359869_+,NA|105aa|up_0|NZ_CP038932.1_362005_362320_-,NA|97aa|down_0|NZ_CP038932.1_363885_364176_+,NA|233aa|down_1|NZ_CP038932.1_364213_364912_+,NA|99aa|down_2|NZ_CP038932.1_364928_365225_+,NA|382aa|down_3|NZ_CP038932.1_365348_366494_+,NA|192aa|down_4|NZ_CP038932.1_366766_367342_+	NA|73aa|up_9|NZ_CP038932.1_353729_353948_-	NA	NA|325aa|up_8|NZ_CP038932.1_354315_355290_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|85aa|up_7|NZ_CP038932.1_355828_356083_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP038932.1_356805_357792_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP038932.1_357929_358124_-	NA	NA|216aa|up_4|NZ_CP038932.1_358806_359454_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|141aa|up_3|NZ_CP038932.1_359446_359869_+	NA	NA|468aa|up_2|NZ_CP038932.1_360030_361434_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_1|NZ_CP038932.1_361484_362060_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_0|NZ_CP038932.1_362005_362320_-	NA	NA|97aa|down_0|NZ_CP038932.1_363885_364176_+	NA	NA|233aa|down_1|NZ_CP038932.1_364213_364912_+	NA	NA|99aa|down_2|NZ_CP038932.1_364928_365225_+	NA	NA|382aa|down_3|NZ_CP038932.1_365348_366494_+	NA	NA|192aa|down_4|NZ_CP038932.1_366766_367342_+	NA	NA|278aa|down_5|NZ_CP038932.1_367399_368233_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_6|NZ_CP038932.1_368348_369533_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_7|NZ_CP038932.1_369551_370496_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_8|NZ_CP038932.1_370800_371586_+	TIGR03545, TIGR03545, TIGR03545 family protein	NA|123aa|down_9|NZ_CP038932.1_371703_372072_-	COG3603, COG3603, Uncharacterized conserved protein [Function unknown]
GCF_009708915.1_ASM970891v1	NZ_CP038932	Piscirickettsia salmonis strain Psal-025 chromosome, complete genome	2	2640800-2640920	2	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,csa3	Orphan	TTGATTAAGTCCAAGGGCTGCTAACCATTGATAAGCT	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|158aa|up_7|NZ_CP038932.1_2632425_2632899_-,NA|172aa|up_3|NZ_CP038932.1_2638286_2638802_+,NA|88aa|up_2|NZ_CP038932.1_2639034_2639298_+,NA|137aa|up_1|NZ_CP038932.1_2639566_2639977_+,NA|141aa|up_0|NZ_CP038932.1_2640220_2640643_-,NA	NA|205aa|up_9|NZ_CP038932.1_2630427_2631042_-	PRK05920, PRK05920, aromatic acid decarboxylase; Validated	NA|461aa|up_8|NZ_CP038932.1_2631034_2632417_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|158aa|up_7|NZ_CP038932.1_2632425_2632899_-	NA	NA|420aa|up_6|NZ_CP038932.1_2633031_2634291_+	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|694aa|up_5|NZ_CP038932.1_2634746_2636828_+	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|337aa|up_4|NZ_CP038932.1_2637131_2638142_+	cd00180, PKc, Catalytic domain of Protein Kinases	NA|172aa|up_3|NZ_CP038932.1_2638286_2638802_+	NA	NA|88aa|up_2|NZ_CP038932.1_2639034_2639298_+	NA	NA|137aa|up_1|NZ_CP038932.1_2639566_2639977_+	NA	NA|141aa|up_0|NZ_CP038932.1_2640220_2640643_-	NA	NA|155aa|down_0|NZ_CP038932.1_2642297_2642762_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|160aa|down_1|NZ_CP038932.1_2642818_2643298_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|132aa|down_2|NZ_CP038932.1_2644155_2644551_+	pfam17775, UPF0225, UPF0225 domain	NA|242aa|down_3|NZ_CP038932.1_2645519_2646245_-	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|396aa|down_4|NZ_CP038932.1_2646490_2647678_+	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|376aa|down_5|NZ_CP038932.1_2648032_2649160_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|181aa|down_6|NZ_CP038932.1_2649490_2650033_-	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|229aa|down_7|NZ_CP038932.1_2650029_2650716_-	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|204aa|down_8|NZ_CP038932.1_2650719_2651331_-	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase	NA|340aa|down_9|NZ_CP038932.1_2651377_2652397_-	TIGR00512, methylthioribose-1-phosphate_isomerase_predicted, S-methyl-5-thioribose-1-phosphate isomerase
GCF_009708915.1_ASM970891v1	NZ_CP038933	Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence	1	197038-197261	1	CRT	no		RT	Orphan	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	3	3	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|68aa|up_9|NZ_CP038933.1_187529_187733_+,NA|57aa|up_8|NZ_CP038933.1_187729_187900_+,NA|86aa|up_5|NZ_CP038933.1_189927_190185_-,NA|57aa|up_3|NZ_CP038933.1_192689_192860_+,NA|51aa|down_3|NZ_CP038933.1_200130_200283_+,NA|308aa|down_6|NZ_CP038933.1_203070_203994_+	NA|68aa|up_9|NZ_CP038933.1_187529_187733_+	NA	NA|57aa|up_8|NZ_CP038933.1_187729_187900_+	NA	NA|361aa|up_7|NZ_CP038933.1_188086_189169_-	pfam00665, rve, Integrase core domain	NA|167aa|up_6|NZ_CP038933.1_189325_189826_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|86aa|up_5|NZ_CP038933.1_189927_190185_-	NA	NA|396aa|up_4|NZ_CP038933.1_190253_191440_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|57aa|up_3|NZ_CP038933.1_192689_192860_+	NA	NA|272aa|up_2|NZ_CP038933.1_193189_194005_+	pfam04986, Y2_Tnp, Putative transposase	NA|197aa|up_1|NZ_CP038933.1_194250_194841_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|340aa|up_0|NZ_CP038933.1_195806_196826_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|56aa|down_0|NZ_CP038933.1_198475_198643_-	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	NA|243aa|down_1|NZ_CP038933.1_198698_199427_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|82aa|down_2|NZ_CP038933.1_199395_199641_-	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|51aa|down_3|NZ_CP038933.1_200130_200283_+	NA	NA|577aa|down_4|NZ_CP038933.1_200295_202026_+	cd09108, PLDc_PMFPLD_like_1, Catalytic domain, repeat 1, of phospholipase D from Streptomyces Sp	NA|243aa|down_5|NZ_CP038933.1_202185_202914_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|308aa|down_6|NZ_CP038933.1_203070_203994_+	NA	NA|219aa|down_7|NZ_CP038933.1_204234_204891_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|243aa|down_8|NZ_CP038933.1_205020_205749_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|266aa|down_9|NZ_CP038933.1_205993_206791_-	pfam01925, TauE, Sulfite exporter TauE/SafE
