assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009709335.1_ASM970933v1	NZ_CP039186	Piscirickettsia salmonis strain Psal-159 chromosome, complete genome	1	351603-351732	1	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	41	351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686|351649-351686	NZ_CP039187.1_152648-152611|NZ_CP039187.1_141908-141945|NZ_CP039187.1_91956-91919|NZ_CP039186.1_57067-57030|NZ_CP039186.1_255149-255112|NZ_CP039186.1_782096-782059|NZ_CP039186.1_850666-850629|NZ_CP039186.1_872811-872774|NZ_CP039186.1_1042737-1042700|NZ_CP039186.1_1563969-1563932|NZ_CP039186.1_1612822-1612785|NZ_CP039186.1_1959119-1959082|NZ_CP039186.1_1999640-1999603|NZ_CP039186.1_2070121-2070084|NZ_CP039186.1_2177557-2177520|NZ_CP039186.1_2406093-2406056|NZ_CP039186.1_2523999-2523962|NZ_CP039186.1_2540027-2539990|NZ_CP039186.1_2626981-2626944|NZ_CP039186.1_2928113-2928076|NZ_CP039186.1_46495-46532|NZ_CP039186.1_177366-177403|NZ_CP039186.1_182038-182075|NZ_CP039186.1_224248-224285|NZ_CP039186.1_287843-287880|NZ_CP039186.1_449689-449726|NZ_CP039186.1_519443-519480|NZ_CP039186.1_785322-785359|NZ_CP039186.1_1121871-1121908|NZ_CP039186.1_1308453-1308490|NZ_CP039186.1_1350305-1350342|NZ_CP039186.1_1374440-1374477|NZ_CP039186.1_1529845-1529882|NZ_CP039186.1_1561818-1561855|NZ_CP039186.1_2160908-2160945|NZ_CP039186.1_2302643-2302680|NZ_CP039186.1_2359473-2359510|NZ_CP039186.1_2717039-2717076|NZ_CP039186.1_2914922-2914959|NZ_CP039186.1_2924676-2924713|NZ_CP039186.1_602961-602998	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|485aa|up_9|NZ_CP039186.1_340896_342351_-,NA|73aa|up_8|NZ_CP039186.1_343213_343432_-,NA|65aa|up_5|NZ_CP039186.1_346306_346501_-,NA|105aa|up_1|NZ_CP039186.1_350381_350696_-,NA|97aa|down_0|NZ_CP039186.1_352261_352552_+,NA|233aa|down_1|NZ_CP039186.1_352589_353288_+,NA|99aa|down_2|NZ_CP039186.1_353304_353601_+,NA|284aa|down_3|NZ_CP039186.1_353718_354570_+,NA|128aa|down_4|NZ_CP039186.1_354774_355158_+,NA|192aa|down_5|NZ_CP039186.1_355430_356006_+	NA|485aa|up_9|NZ_CP039186.1_340896_342351_-	NA	NA|73aa|up_8|NZ_CP039186.1_343213_343432_-	NA	NA|85aa|up_7|NZ_CP039186.1_344205_344460_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP039186.1_345182_346169_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP039186.1_346306_346501_-	NA	NA|354aa|up_4|NZ_CP039186.1_347183_348245_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|468aa|up_3|NZ_CP039186.1_348406_349810_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_2|NZ_CP039186.1_349860_350436_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_1|NZ_CP039186.1_350381_350696_-	NA	NA|192aa|up_0|NZ_CP039186.1_350736_351312_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|97aa|down_0|NZ_CP039186.1_352261_352552_+	NA	NA|233aa|down_1|NZ_CP039186.1_352589_353288_+	NA	NA|99aa|down_2|NZ_CP039186.1_353304_353601_+	NA	NA|284aa|down_3|NZ_CP039186.1_353718_354570_+	NA	NA|128aa|down_4|NZ_CP039186.1_354774_355158_+	NA	NA|192aa|down_5|NZ_CP039186.1_355430_356006_+	NA	NA|278aa|down_6|NZ_CP039186.1_356063_356897_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_7|NZ_CP039186.1_357012_358197_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_8|NZ_CP039186.1_358215_359160_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_9|NZ_CP039186.1_359464_360250_+	TIGR03545, TIGR03545, TIGR03545 family protein
GCF_009709335.1_ASM970933v1	NZ_CP039186	Piscirickettsia salmonis strain Psal-159 chromosome, complete genome	2	516559-516679	2	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	AGCTTATCAATGGTTAGTAGCCCTTGGACTTAATCAA	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA,NA|47aa|down_0|NZ_CP039186.1_516950_517091_-,NA|141aa|down_1|NZ_CP039186.1_517123_517546_+,NA|137aa|down_2|NZ_CP039186.1_517789_518200_-,NA|71aa|down_5|NZ_CP039186.1_519478_519691_-,NA|158aa|down_9|NZ_CP039186.1_525092_525566_+	NA|296aa|up_9|NZ_CP039186.1_505117_506004_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|243aa|up_8|NZ_CP039186.1_506389_507118_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|195aa|up_7|NZ_CP039186.1_507274_507859_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|228aa|up_6|NZ_CP039186.1_507862_508546_-	pfam02661, Fic, Fic/DOC family	NA|243aa|up_5|NZ_CP039186.1_509027_509756_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|396aa|up_4|NZ_CP039186.1_510087_511275_-	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|242aa|up_3|NZ_CP039186.1_511520_512246_+	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|265aa|up_2|NZ_CP039186.1_512424_513219_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|132aa|up_1|NZ_CP039186.1_513215_513611_-	pfam17775, UPF0225, UPF0225 domain	NA|296aa|up_0|NZ_CP039186.1_514294_515181_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|47aa|down_0|NZ_CP039186.1_516950_517091_-	NA	NA|141aa|down_1|NZ_CP039186.1_517123_517546_+	NA	NA|137aa|down_2|NZ_CP039186.1_517789_518200_-	NA	NA|192aa|down_3|NZ_CP039186.1_518530_519106_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|122aa|down_4|NZ_CP039186.1_519051_519417_-	pfam13384, HTH_23, Homeodomain-like domain	NA|71aa|down_5|NZ_CP039186.1_519478_519691_-	NA	NA|337aa|down_6|NZ_CP039186.1_519849_520860_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|694aa|down_7|NZ_CP039186.1_521163_523245_-	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|420aa|down_8|NZ_CP039186.1_523700_524960_-	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|158aa|down_9|NZ_CP039186.1_525092_525566_+	NA
GCF_009709335.1_ASM970933v1	NZ_CP039187	Piscirickettsia salmonis strain Psal-159 plasmid unnamed1, complete sequence	1	1232-1743	1	CRT	no		RT	Orphan	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	7	7	Orphan	DEDDh,csa3,RT,cas3,DinG	NA,NA|111aa|down_4|NZ_CP039187.1_6971_7304_-,NA|354aa|down_8|NZ_CP039187.1_9715_10777_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|340aa|up_0|NZ_CP039187.1_0_1020_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|243aa|down_0|NZ_CP039187.1_2231_2960_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|859aa|down_1|NZ_CP039187.1_3163_5740_+	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23	NA|52aa|down_2|NZ_CP039187.1_6034_6190_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|243aa|down_3|NZ_CP039187.1_6213_6942_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|111aa|down_4|NZ_CP039187.1_6971_7304_-	NA	NA|114aa|down_5|NZ_CP039187.1_7374_7716_-	COG5323, COG5323, Uncharacterized conserved protein [Function unknown]	NA|243aa|down_6|NZ_CP039187.1_7871_8600_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|189aa|down_7|NZ_CP039187.1_8806_9373_+	cd06830, PLPDE_III_ADC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase	NA|354aa|down_8|NZ_CP039187.1_9715_10777_+	NA	NA|361aa|down_9|NZ_CP039187.1_10806_11889_-	pfam00665, rve, Integrase core domain
