assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009709395.1_ASM970939v1	NZ_CP039201	Piscirickettsia salmonis strain Psal-163 chromosome, complete genome	1	351506-351635	1	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	41	351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589|351552-351589	NZ_CP039202.1_152644-152607|NZ_CP039202.1_141904-141941|NZ_CP039202.1_91954-91917|NZ_CP039201.1_57067-57030|NZ_CP039201.1_255149-255112|NZ_CP039201.1_781998-781961|NZ_CP039201.1_850566-850529|NZ_CP039201.1_872711-872674|NZ_CP039201.1_1042637-1042600|NZ_CP039201.1_1573603-1573566|NZ_CP039201.1_1622456-1622419|NZ_CP039201.1_1968753-1968716|NZ_CP039201.1_2009274-2009237|NZ_CP039201.1_2079755-2079718|NZ_CP039201.1_2187191-2187154|NZ_CP039201.1_2415724-2415687|NZ_CP039201.1_2533630-2533593|NZ_CP039201.1_2549658-2549621|NZ_CP039201.1_2636612-2636575|NZ_CP039201.1_2937743-2937706|NZ_CP039201.1_46495-46532|NZ_CP039201.1_177366-177403|NZ_CP039201.1_182038-182075|NZ_CP039201.1_224248-224285|NZ_CP039201.1_287746-287783|NZ_CP039201.1_449592-449629|NZ_CP039201.1_519346-519383|NZ_CP039201.1_785223-785260|NZ_CP039201.1_1121770-1121807|NZ_CP039201.1_1318088-1318125|NZ_CP039201.1_1359940-1359977|NZ_CP039201.1_1384075-1384112|NZ_CP039201.1_1539479-1539516|NZ_CP039201.1_1571452-1571489|NZ_CP039201.1_2170542-2170579|NZ_CP039201.1_2312274-2312311|NZ_CP039201.1_2369104-2369141|NZ_CP039201.1_2726670-2726707|NZ_CP039201.1_2924553-2924590|NZ_CP039201.1_2934306-2934343|NZ_CP039201.1_602864-602901	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|485aa|up_9|NZ_CP039201.1_340799_342254_-,NA|73aa|up_8|NZ_CP039201.1_343116_343335_-,NA|65aa|up_5|NZ_CP039201.1_346209_346404_-,NA|105aa|up_1|NZ_CP039201.1_350284_350599_-,NA|97aa|down_0|NZ_CP039201.1_352164_352455_+,NA|233aa|down_1|NZ_CP039201.1_352492_353191_+,NA|99aa|down_2|NZ_CP039201.1_353207_353504_+,NA|284aa|down_3|NZ_CP039201.1_353621_354473_+,NA|128aa|down_4|NZ_CP039201.1_354677_355061_+,NA|192aa|down_5|NZ_CP039201.1_355333_355909_+	NA|485aa|up_9|NZ_CP039201.1_340799_342254_-	NA	NA|73aa|up_8|NZ_CP039201.1_343116_343335_-	NA	NA|85aa|up_7|NZ_CP039201.1_344108_344363_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP039201.1_345085_346072_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP039201.1_346209_346404_-	NA	NA|354aa|up_4|NZ_CP039201.1_347086_348148_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|468aa|up_3|NZ_CP039201.1_348309_349713_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_2|NZ_CP039201.1_349763_350339_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_1|NZ_CP039201.1_350284_350599_-	NA	NA|192aa|up_0|NZ_CP039201.1_350639_351215_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|97aa|down_0|NZ_CP039201.1_352164_352455_+	NA	NA|233aa|down_1|NZ_CP039201.1_352492_353191_+	NA	NA|99aa|down_2|NZ_CP039201.1_353207_353504_+	NA	NA|284aa|down_3|NZ_CP039201.1_353621_354473_+	NA	NA|128aa|down_4|NZ_CP039201.1_354677_355061_+	NA	NA|192aa|down_5|NZ_CP039201.1_355333_355909_+	NA	NA|278aa|down_6|NZ_CP039201.1_355966_356800_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_7|NZ_CP039201.1_356915_358100_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_8|NZ_CP039201.1_358118_359063_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_9|NZ_CP039201.1_359367_360153_+	TIGR03545, TIGR03545, TIGR03545 family protein
GCF_009709395.1_ASM970939v1	NZ_CP039201	Piscirickettsia salmonis strain Psal-163 chromosome, complete genome	2	516462-516582	2	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	AGCTTATCAATGGTTAGTAGCCCTTGGACTTAATCAA	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA,NA|47aa|down_0|NZ_CP039201.1_516853_516994_-,NA|141aa|down_1|NZ_CP039201.1_517026_517449_+,NA|137aa|down_2|NZ_CP039201.1_517692_518103_-,NA|71aa|down_5|NZ_CP039201.1_519381_519594_-,NA|158aa|down_9|NZ_CP039201.1_524995_525469_+	NA|296aa|up_9|NZ_CP039201.1_505020_505907_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|243aa|up_8|NZ_CP039201.1_506292_507021_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|195aa|up_7|NZ_CP039201.1_507177_507762_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|228aa|up_6|NZ_CP039201.1_507765_508449_-	pfam02661, Fic, Fic/DOC family	NA|243aa|up_5|NZ_CP039201.1_508930_509659_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|396aa|up_4|NZ_CP039201.1_509990_511178_-	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|242aa|up_3|NZ_CP039201.1_511423_512149_+	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|265aa|up_2|NZ_CP039201.1_512327_513122_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|132aa|up_1|NZ_CP039201.1_513118_513514_-	pfam17775, UPF0225, UPF0225 domain	NA|296aa|up_0|NZ_CP039201.1_514197_515084_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|47aa|down_0|NZ_CP039201.1_516853_516994_-	NA	NA|141aa|down_1|NZ_CP039201.1_517026_517449_+	NA	NA|137aa|down_2|NZ_CP039201.1_517692_518103_-	NA	NA|192aa|down_3|NZ_CP039201.1_518433_519009_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|122aa|down_4|NZ_CP039201.1_518954_519320_-	pfam13384, HTH_23, Homeodomain-like domain	NA|71aa|down_5|NZ_CP039201.1_519381_519594_-	NA	NA|337aa|down_6|NZ_CP039201.1_519752_520763_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|694aa|down_7|NZ_CP039201.1_521066_523148_-	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|420aa|down_8|NZ_CP039201.1_523603_524863_-	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|158aa|down_9|NZ_CP039201.1_524995_525469_+	NA
GCF_009709395.1_ASM970939v1	NZ_CP039202	Piscirickettsia salmonis strain Psal-163 plasmid unnamed1, complete sequence	1	1232-1743	1	CRT	no		RT	Orphan	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	7	7	Orphan	DEDDh,csa3,RT,cas3,DinG	NA,NA|111aa|down_4|NZ_CP039202.1_6971_7304_-,NA|354aa|down_8|NZ_CP039202.1_9715_10777_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|340aa|up_0|NZ_CP039202.1_0_1020_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|243aa|down_0|NZ_CP039202.1_2231_2960_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|859aa|down_1|NZ_CP039202.1_3163_5740_+	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23	NA|52aa|down_2|NZ_CP039202.1_6034_6190_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|243aa|down_3|NZ_CP039202.1_6213_6942_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|111aa|down_4|NZ_CP039202.1_6971_7304_-	NA	NA|114aa|down_5|NZ_CP039202.1_7374_7716_-	COG5323, COG5323, Uncharacterized conserved protein [Function unknown]	NA|243aa|down_6|NZ_CP039202.1_7871_8600_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|189aa|down_7|NZ_CP039202.1_8806_9373_+	cd06830, PLPDE_III_ADC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase	NA|354aa|down_8|NZ_CP039202.1_9715_10777_+	NA	NA|361aa|down_9|NZ_CP039202.1_10806_11889_-	pfam00665, rve, Integrase core domain
