The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046335	Streptococcus mitis strain FDAARGOS_684 chromosome, complete genome	1868857	11044	67475	1868857	holin,protease,transposase,bacteriocin	Bacillus_phage(18.18%)	47	NA	NA
WP_000742256.1|11044_11860_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000010168.1|12005_12974_+	ribose-phosphate diphosphokinase	NA	A0A2K9L2G2	Tupanvirus	33.1	7.7e-40
WP_031237278.1|13091_14057_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_004239014.1|14159_14486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000757030.1|14860_15766_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA	NA
WP_115262359.1|15893_17234_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA	NA
WP_001232997.1|17377_18931_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA	NA
WP_001035392.1|19141_22408_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_000175249.1|22548_23448_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_004239017.1|23595_26229_+	DNA polymerase I	NA	A0A142F1Q9	Bacillus_phage	32.1	1.7e-68
WP_000076488.1|26313_26751_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000009133.1|26977_27988_-	YeiH family putative sulfate export transporter	NA	NA	NA	NA	NA
WP_000366338.1|28328_29498_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_000616130.1|29494_30265_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_000717442.1|30261_31254_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_000136445.1|31259_31493_+	acyl carrier protein	NA	NA	NA	NA	NA
WP_000748703.1|31944_33138_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA	NA
WP_000748697.1|33226_34408_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA	NA
WP_000748707.1|34496_35675_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA	NA
WP_025169752.1|35873_37220_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_001221869.1|37216_37948_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000658220.1|38193_38322_+|bacteriocin	smi_0059.1 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_078228449.1|38342_38489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000180829.1|38522_38696_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_001180497.1|38819_38972_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_000668315.1|39687_41841_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.7	3.0e-44
WP_000801588.1|41853_43203_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_078228441.1|43330_44080_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SE76	Cyanophage	40.1	4.9e-42
WP_000361182.1|44279_48005_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.2	3.6e-37
WP_000220647.1|48098_49541_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.9	1.3e-54
WP_001284587.1|49745_50768_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.4	2.6e-62
WP_000717514.1|50764_51310_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	33.7	2.4e-22
WP_025169753.1|51510_53058_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	53.9	7.2e-48
WP_000772239.1|53179_54442_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000165493.1|54684_55176_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.2	1.9e-18
WP_115262358.1|55120_56254_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000614686.1|56263_56491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000567247.1|56554_57850_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	5.0e-18
WP_001007193.1|58060_58777_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000196567.1|59095_60883_+	beta-galactosidase	NA	NA	NA	NA	NA
WP_000156975.1|60879_61356_+	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA	NA
WP_000617010.1|61382_62288_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_000185285.1|62274_63096_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_000240985.1|63099_63504_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_000903570.1|63714_64881_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_000649444.1|65104_66142_+	galactose mutarotase	NA	NA	NA	NA	NA
WP_000724612.1|66278_67475_+|holin	choline-binding protein C	holin	NA	NA	NA	NA
>prophage 2
NZ_CP046335	Streptococcus mitis strain FDAARGOS_684 chromosome, complete genome	1868857	431622	440095	1868857		Streptococcus_phage(14.29%)	11	NA	NA
WP_000435590.1|431622_433419_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	37.7	2.7e-107
WP_000106207.1|433586_433976_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_000182730.1|434126_434459_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000284390.1|434470_435262_+	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_000048148.1|435369_436134_-	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA	NA
WP_000714813.1|436390_437059_+	aquaporin	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	26.5	3.3e-05
WP_000082579.1|437264_437756_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	60.9	2.6e-44
WP_000196453.1|437773_438490_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	47.7	3.7e-63
WP_000464574.1|438482_438926_-	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	63.0	2.4e-44
WP_000828780.1|438925_439579_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.2	2.4e-61
WP_001029581.1|439780_440095_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	47.2	8.6e-17
>prophage 3
NZ_CP046335	Streptococcus mitis strain FDAARGOS_684 chromosome, complete genome	1868857	762233	772638	1868857		Streptococcus_phage(70.0%)	11	NA	NA
WP_001025689.1|762233_763142_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.0	4.0e-06
WP_000745686.1|763138_763600_+	signal peptidase II	NA	NA	NA	NA	NA
WP_000403207.1|763589_764477_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.0	2.2e-09
WP_000728241.1|764479_766366_+	MBL fold metallo-hydrolase	NA	I2E8W4	Clostridium_phage	24.3	4.1e-13
WP_078228381.1|766442_767573_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	59.5	7.7e-116
WP_000255279.1|767582_768845_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	66.2	1.3e-143
WP_000689679.1|768848_769646_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	51.7	5.5e-60
WP_000033398.1|769874_770513_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	67.1	3.7e-75
WP_078228383.1|770509_771400_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	53.1	1.2e-74
WP_000358227.1|771439_771757_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.2e-28
WP_001166865.1|771759_772638_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	4.6e-116
>prophage 4
NZ_CP046335	Streptococcus mitis strain FDAARGOS_684 chromosome, complete genome	1868857	1000370	1010041	1868857		Streptococcus_phage(25.0%)	10	NA	NA
WP_000584858.1|1000370_1002272_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.5	8.6e-51
WP_000121686.1|1002425_1004144_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	83.9	1.0e-273
WP_000434630.1|1004255_1004603_+	thiol reductase thioredoxin	NA	NA	NA	NA	NA
WP_000566125.1|1004640_1005318_-	potassium/ion channel protein	NA	A0A1B0Y2S3	Lactobacillus_phage	44.5	1.5e-18
WP_001061860.1|1005360_1005624_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	48.8	1.6e-16
WP_078137160.1|1005616_1005919_-	antitoxin	NA	NA	NA	NA	NA
WP_000004960.1|1005949_1006759_-	MBL fold metallo-hydrolase	NA	A0A2H4J3R0	uncultured_Caudovirales_phage	37.4	6.9e-34
WP_000571163.1|1006751_1008110_-	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	33.7	1.5e-33
WP_000722072.1|1008102_1008810_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.8	8.1e-39
WP_000886130.1|1008865_1010041_-	A/G-specific adenine glycosylase	NA	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	30.2	8.8e-22
>prophage 5
NZ_CP046335	Streptococcus mitis strain FDAARGOS_684 chromosome, complete genome	1868857	1150025	1157302	1868857		Streptococcus_phage(42.86%)	10	NA	NA
WP_001189732.1|1150025_1151351_-	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	28.0	2.4e-31
WP_001272937.1|1151525_1152137_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000855747.1|1152181_1152910_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000272298.1|1152949_1153861_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	1.0e-89
WP_001206968.1|1153926_1154163_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000590982.1|1154228_1154972_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	4.7e-29
WP_001103445.1|1154971_1155772_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000889083.1|1155929_1156286_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	58.1	1.2e-33
WP_001171156.1|1156298_1156808_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	53.4	3.4e-47
WP_000405856.1|1156807_1157302_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	51.5	1.2e-41
>prophage 6
NZ_CP046335	Streptococcus mitis strain FDAARGOS_684 chromosome, complete genome	1868857	1515575	1522276	1868857		Escherichia_phage(50.0%)	7	NA	NA
WP_000600892.1|1515575_1516439_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.8	2.3e-27
WP_000141489.1|1516504_1517554_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.5	1.6e-70
WP_000131475.1|1517567_1518161_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	31.8	6.7e-10
WP_000676151.1|1518161_1519031_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	62.8	3.5e-100
WP_000878660.1|1519109_1520174_-	sugar transferase	NA	Q5ULS2	Lactobacillus_virus	28.6	8.3e-19
WP_025169761.1|1520184_1521177_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_000272527.1|1521163_1522276_-	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	67.9	5.8e-148
>prophage 7
NZ_CP046335	Streptococcus mitis strain FDAARGOS_684 chromosome, complete genome	1868857	1830567	1839328	1868857		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510419.1|1830567_1831407_-	energy-coupling factor transporter ATPase	NA	A0A2K9L3Z8	Tupanvirus	30.7	9.4e-18
WP_000843636.1|1831391_1832219_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.6	7.3e-23
WP_000712123.1|1832215_1832761_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001227984.1|1832771_1833599_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170225.1|1833640_1834924_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	27.0	9.0e-12
WP_000424291.1|1834920_1836171_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	43.8	2.0e-96
WP_000455896.1|1836329_1836698_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	60.0	6.3e-19
WP_000266646.1|1836700_1837798_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073419.1|1837849_1839328_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	1.7e-94
