assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	1	223178-223301	1	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	GGGATGACGAGACTTATCTTTATGCCGCCGCGAACCGTCATACCGC	46	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3	NA|419aa|up_0|NZ_CP037426.1_221702_222959_-,NA|66aa|down_0|NZ_CP037426.1_224083_224281_+	NA|277aa|up_9|NZ_CP037426.1_214207_215038_-	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator	NA|237aa|up_8|NZ_CP037426.1_215173_215884_+	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|139aa|up_7|NZ_CP037426.1_215892_216309_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|164aa|up_6|NZ_CP037426.1_216929_217421_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|up_5|NZ_CP037426.1_217440_217788_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|184aa|up_4|NZ_CP037426.1_218082_218634_-	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|207aa|up_3|NZ_CP037426.1_218617_219238_-	cd06192, DHOD_e_trans_like, FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins	NA|382aa|up_2|NZ_CP037426.1_219341_220487_-	pfam13624, SurA_N_3, SurA N-terminal domain	NA|169aa|up_1|NZ_CP037426.1_221136_221643_-	PRK01250, PRK01250, inorganic diphosphatase	NA|419aa|up_0|NZ_CP037426.1_221702_222959_-	NA	NA|66aa|down_0|NZ_CP037426.1_224083_224281_+	NA	NA|413aa|down_1|NZ_CP037426.1_224428_225667_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|300aa|down_2|NZ_CP037426.1_225937_226837_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|436aa|down_3|NZ_CP037426.1_226884_228192_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|382aa|down_4|NZ_CP037426.1_228209_229355_-	COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism]	NA|351aa|down_5|NZ_CP037426.1_229482_230535_-	pfam01212, Beta_elim_lyase, Beta-eliminating lyase	NA|350aa|down_6|NZ_CP037426.1_230531_231581_-	COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism]	NA|592aa|down_7|NZ_CP037426.1_231582_233358_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|330aa|down_8|NZ_CP037426.1_233358_234348_-	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH)	NA|559aa|down_9|NZ_CP037426.1_234352_236029_-	pfam00891, Methyltransf_2, O-methyltransferase
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	2	262927-263057	2	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	AACCGTCATACCGCGATTCATTCGCGGTATCTCAGCCGCTAACAAGTAGC	50	1	6	262977-263007|262977-263007|262977-263007|262977-263007|262977-263007|262977-263007	NZ_CP037426.1_572815-572845|NZ_CP037426.1_194198-194168|NZ_CP037426.1_300033-300003|NZ_CP037426.1_529301-529271|NZ_CP037426.1_609897-609927|NZ_CP037426.1_768862-768832	NA	1	1	Orphan	DEDDh,RT,cas3	NA|31aa|up_4|NZ_CP037426.1_258165_258258_+,NA|266aa|down_9|NZ_CP037426.1_273979_274777_-	NA|393aa|up_9|NZ_CP037426.1_251156_252335_-	PRK01278, argD, acetylornithine transaminase protein; Provisional	NA|391aa|up_8|NZ_CP037426.1_252610_253783_+	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D	NA|186aa|up_7|NZ_CP037426.1_254391_254949_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|104aa|up_6|NZ_CP037426.1_257084_257396_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|up_5|NZ_CP037426.1_257596_257944_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|31aa|up_4|NZ_CP037426.1_258165_258258_+	NA	NA|341aa|up_3|NZ_CP037426.1_258339_259362_-	PRK12299, obgE, GTPase CgtA; Reviewed	NA|425aa|up_2|NZ_CP037426.1_259349_260624_-	PRK00077, eno, enolase; Provisional	NA|475aa|up_1|NZ_CP037426.1_260628_262053_-	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|225aa|up_0|NZ_CP037426.1_262079_262754_+	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|455aa|down_0|NZ_CP037426.1_263603_264968_+	PHA03095, PHA03095, ankyrin-like protein; Provisional	NA|496aa|down_1|NZ_CP037426.1_265102_266590_+	TIGR02519, related_to_type_II_protein_secretion_protein, pilus (MSHA type) biogenesis protein MshL	NA|304aa|down_2|NZ_CP037426.1_266597_267509_-	pfam01617, Surface_Ag_2, Surface antigen	NA|409aa|down_3|NZ_CP037426.1_267575_268802_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|490aa|down_4|NZ_CP037426.1_269191_270661_+	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|101aa|down_5|NZ_CP037426.1_271520_271823_+	pfam01527, HTH_Tnp_1, Transposase	NA|118aa|down_6|NZ_CP037426.1_271807_272161_+	pfam13276, HTH_21, HTH-like domain	NA|164aa|down_7|NZ_CP037426.1_272366_272858_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|down_8|NZ_CP037426.1_272877_273225_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|266aa|down_9|NZ_CP037426.1_273979_274777_-	NA
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	3	280194-280477	3,1	CRISPRCasFinder,CRT	no		DEDDh,RT,cas3	Orphan	TAGCTTTTCCACTGCATCTTCTATTAACTTTTTCACTTCATCTTTTG,TCTTCCACTGCATCTTCTATTAACTTTTTCACTTCATCTTTTG	47,43	1	1	280394-280434	NZ_CP037426.1_280529-280569	NA:NA	1,3	3	Orphan	DEDDh,RT,cas3	NA|266aa|up_5|NZ_CP037426.1_273979_274777_-,NA|198aa|down_8|NZ_CP037426.1_290280_290874_+	NA|101aa|up_9|NZ_CP037426.1_271520_271823_+	pfam01527, HTH_Tnp_1, Transposase	NA|118aa|up_8|NZ_CP037426.1_271807_272161_+	pfam13276, HTH_21, HTH-like domain	NA|164aa|up_7|NZ_CP037426.1_272366_272858_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|up_6|NZ_CP037426.1_272877_273225_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|266aa|up_5|NZ_CP037426.1_273979_274777_-	NA	NA|225aa|up_4|NZ_CP037426.1_274826_275501_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|453aa|up_3|NZ_CP037426.1_275531_276890_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|365aa|up_2|NZ_CP037426.1_277061_278156_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|164aa|up_1|NZ_CP037426.1_278142_278634_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|up_0|NZ_CP037426.1_278653_279001_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|851aa|down_0|NZ_CP037426.1_281309_283862_-	PRK13208, valS, valyl-tRNA synthetase; Reviewed	NA|98aa|down_1|NZ_CP037426.1_284113_284407_+	pfam01186, Lysyl_oxidase, Lysyl oxidase	NA|172aa|down_2|NZ_CP037426.1_285399_285915_-	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E	NA|107aa|down_3|NZ_CP037426.1_286059_286380_+	TIGR00810, secG, protein translocase, SecG subunit	NA|535aa|down_4|NZ_CP037426.1_286379_287984_+	PRK05380, pyrG, CTP synthetase; Validated	NA|137aa|down_5|NZ_CP037426.1_288009_288420_+	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|117aa|down_6|NZ_CP037426.1_288600_288951_+	TIGR02697, hypothetical_protein_WD_0725, Wolbachia palindromic element (WPE) domain	NA|428aa|down_7|NZ_CP037426.1_288885_290169_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|198aa|down_8|NZ_CP037426.1_290280_290874_+	NA	NA|366aa|down_9|NZ_CP037426.1_291227_292325_+	PRK03992, PRK03992, proteasome-activating nucleotidase; Provisional
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	4	300026-300477	2	CRT	no	RT	DEDDh,RT,cas3	Unclear	GTCATCCCGCTNCNTGTTAGCGGGATCTCTTGTTAGCG	38	0	0	NA	NA	NA	5	5	Orphan	DEDDh,RT,cas3	NA|198aa|up_7|NZ_CP037426.1_290280_290874_+,NA|252aa|up_3|NZ_CP037426.1_294380_295136_-,NA|59aa|up_0|NZ_CP037426.1_299543_299720_-,NA|314aa|down_4|NZ_CP037426.1_304073_305015_-	NA|117aa|up_9|NZ_CP037426.1_288600_288951_+	TIGR02697, hypothetical_protein_WD_0725, Wolbachia palindromic element (WPE) domain	NA|428aa|up_8|NZ_CP037426.1_288885_290169_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|198aa|up_7|NZ_CP037426.1_290280_290874_+	NA	NA|366aa|up_6|NZ_CP037426.1_291227_292325_+	PRK03992, PRK03992, proteasome-activating nucleotidase; Provisional	NA|333aa|up_5|NZ_CP037426.1_292566_293565_+	PRK09212, PRK09212, pyruvate dehydrogenase subunit beta; Validated	NA|118aa|up_4|NZ_CP037426.1_293613_293967_-	pfam04956, TrbC, TrbC/VIRB2 family	NA|252aa|up_3|NZ_CP037426.1_294380_295136_-	NA	NA|599aa|up_2|NZ_CP037426.1_295746_297543_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|468aa|up_1|NZ_CP037426.1_297618_299022_-	pfam05292, MCD, Malonyl-CoA decarboxylase C-terminal domain	NA|59aa|up_0|NZ_CP037426.1_299543_299720_-	NA	NA|304aa|down_0|NZ_CP037426.1_300657_301569_-	cd03402, SPFH_like_u2, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|313aa|down_1|NZ_CP037426.1_301576_302515_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|245aa|down_2|NZ_CP037426.1_302511_303246_-	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|236aa|down_3|NZ_CP037426.1_303305_304013_-	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|314aa|down_4|NZ_CP037426.1_304073_305015_-	NA	NA|181aa|down_5|NZ_CP037426.1_305126_305669_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|441aa|down_6|NZ_CP037426.1_305803_307126_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|291aa|down_7|NZ_CP037426.1_307140_308013_-	pfam01617, Surface_Ag_2, Surface antigen	NA|75aa|down_8|NZ_CP037426.1_308177_308402_+	COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]	NA|108aa|down_9|NZ_CP037426.1_308411_308735_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	5	316882-316985	4	CRISPRCasFinder	no	RT	DEDDh,RT,cas3	Unclear	TCGTCATCCCGCTACGTGTTAGCG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3	NA|79aa|up_1|NZ_CP037426.1_314129_314366_-,NA|89aa|down_1|NZ_CP037426.1_317662_317929_+	NA|291aa|up_9|NZ_CP037426.1_307140_308013_-	pfam01617, Surface_Ag_2, Surface antigen	NA|75aa|up_8|NZ_CP037426.1_308177_308402_+	COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]	NA|108aa|up_7|NZ_CP037426.1_308411_308735_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|465aa|up_6|NZ_CP037426.1_308929_310324_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|278aa|up_5|NZ_CP037426.1_310481_311314_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|164aa|up_4|NZ_CP037426.1_311385_311877_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|up_3|NZ_CP037426.1_311896_312244_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|569aa|up_2|NZ_CP037426.1_312329_314036_-	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|79aa|up_1|NZ_CP037426.1_314129_314366_-	NA	NA|572aa|up_0|NZ_CP037426.1_314561_316277_-	TIGR02204, system_ATPase_and_permease_component, ABC transporter, permease/ATP-binding protein	NA|148aa|down_0|NZ_CP037426.1_317073_317517_+	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase	NA|89aa|down_1|NZ_CP037426.1_317662_317929_+	NA	RT|516aa|down_2|NZ_CP037426.1_317937_319485_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|247aa|down_3|NZ_CP037426.1_319481_320222_+	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase	NA|372aa|down_4|NZ_CP037426.1_320416_321532_-	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW	NA|239aa|down_5|NZ_CP037426.1_321528_322245_-	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|288aa|down_6|NZ_CP037426.1_322298_323162_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|105aa|down_7|NZ_CP037426.1_323154_323469_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|114aa|down_8|NZ_CP037426.1_323506_323848_-	pfam05258, DUF721, Protein of unknown function (DUF721)	NA|67aa|down_9|NZ_CP037426.1_324303_324504_-	pfam04384, Fe-S_assembly, Iron-sulphur cluster assembly
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	6	327840-327961	5	CRISPRCasFinder	no	RT	DEDDh,RT,cas3	Unclear	TACATCAGTTCCTTGTTCTGCACTGGTGGTGCTGGTTT	38	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3	NA,NA	RT|516aa|up_9|NZ_CP037426.1_317937_319485_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|247aa|up_8|NZ_CP037426.1_319481_320222_+	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase	NA|372aa|up_7|NZ_CP037426.1_320416_321532_-	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW	NA|239aa|up_6|NZ_CP037426.1_321528_322245_-	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|288aa|up_5|NZ_CP037426.1_322298_323162_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|105aa|up_4|NZ_CP037426.1_323154_323469_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|114aa|up_3|NZ_CP037426.1_323506_323848_-	pfam05258, DUF721, Protein of unknown function (DUF721)	NA|67aa|up_2|NZ_CP037426.1_324303_324504_-	pfam04384, Fe-S_assembly, Iron-sulphur cluster assembly	NA|205aa|up_1|NZ_CP037426.1_324630_325245_-	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|681aa|up_0|NZ_CP037426.1_325358_327401_+	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|116aa|down_0|NZ_CP037426.1_329695_330043_+	pfam01710, HTH_Tnp_IS630, Transposase	NA|164aa|down_1|NZ_CP037426.1_330062_330554_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|278aa|down_2|NZ_CP037426.1_330625_331458_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|607aa|down_3|NZ_CP037426.1_331579_333400_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|124aa|down_4|NZ_CP037426.1_333480_333852_-	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|283aa|down_5|NZ_CP037426.1_334257_335106_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|287aa|down_6|NZ_CP037426.1_335086_335947_+	PRK09377, tsf, elongation factor Ts; Provisional	NA|248aa|down_7|NZ_CP037426.1_335957_336701_+	PRK00358, pyrH, uridylate kinase; Provisional	NA|186aa|down_8|NZ_CP037426.1_336708_337266_+	PRK00083, frr, ribosome recycling factor; Reviewed	NA|232aa|down_9|NZ_CP037426.1_337541_338237_+	pfam01255, Prenyltransf, Putative undecaprenyl diphosphate synthase
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	7	547386-547490	6	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	CCGCTAACAAGCAGCGGGATGACG	24	1	2	547410-547466|547410-547466	NZ_CP037426.1_1332042-1331986|NZ_CP037426.1_947610-947554	NA	1	1	Orphan	DEDDh,RT,cas3	NA|212aa|up_6|NZ_CP037426.1_540040_540676_-,NA|56aa|down_5|NZ_CP037426.1_555414_555582_+,NA|131aa|down_8|NZ_CP037426.1_557782_558175_-	NA|98aa|up_9|NZ_CP037426.1_538531_538825_+	pfam01527, HTH_Tnp_1, Transposase	NA|123aa|up_8|NZ_CP037426.1_538809_539178_+	pfam13276, HTH_21, HTH-like domain	NA|55aa|up_7|NZ_CP037426.1_539403_539568_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|212aa|up_6|NZ_CP037426.1_540040_540676_-	NA	NA|839aa|up_5|NZ_CP037426.1_540804_543321_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|199aa|up_4|NZ_CP037426.1_543333_543930_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|109aa|up_3|NZ_CP037426.1_543975_544302_-	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators	NA|102aa|up_2|NZ_CP037426.1_544301_544607_-	cd13835, IHF_A, Alpha subunit of integration host factor (IHFA)	NA|393aa|up_1|NZ_CP037426.1_544667_545846_-	cd06174, MFS, Major Facilitator Superfamily	NA|136aa|up_0|NZ_CP037426.1_546147_546555_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|513aa|down_0|NZ_CP037426.1_547628_549167_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|214aa|down_1|NZ_CP037426.1_549228_549870_-	cd03459, 3,4-PCD, Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate	NA|164aa|down_2|NZ_CP037426.1_553125_553617_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|down_3|NZ_CP037426.1_553636_553984_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|278aa|down_4|NZ_CP037426.1_554097_554930_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|56aa|down_5|NZ_CP037426.1_555414_555582_+	NA	NA|240aa|down_6|NZ_CP037426.1_555608_556328_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|458aa|down_7|NZ_CP037426.1_556403_557777_+	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|131aa|down_8|NZ_CP037426.1_557782_558175_-	NA	NA|344aa|down_9|NZ_CP037426.1_558244_559276_+	PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	8	572898-573006	7	CRISPRCasFinder	no	RT	DEDDh,RT,cas3	Unclear	AGATCCCGCTAACAAGCAGCGGTATGACG	29	1	2	572927-572977|572927-572977	NZ_CP037426.1_1331900-1331850|NZ_CP037426.1_532859-532909	NA	1	1	Orphan	DEDDh,RT,cas3	NA|78aa|up_1|NZ_CP037426.1_570568_570802_+,NA	NA|310aa|up_9|NZ_CP037426.1_559260_560190_-	PRK05246, PRK05246, glutathione synthetase; Provisional	NA|199aa|up_8|NZ_CP037426.1_560250_560847_-	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only]	NA|445aa|up_7|NZ_CP037426.1_561227_562562_+	TIGR00115, tig, trigger factor	NA|209aa|up_6|NZ_CP037426.1_562573_563200_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|426aa|up_5|NZ_CP037426.1_563199_564477_+	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|818aa|up_4|NZ_CP037426.1_564492_566946_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|432aa|up_3|NZ_CP037426.1_567229_568525_+	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|434aa|up_2|NZ_CP037426.1_568517_569819_+	cd01660, ba3-like_Oxidase_I, ba3-like heme-copper oxidase subunit I	NA|78aa|up_1|NZ_CP037426.1_570568_570802_+	NA	NA|580aa|up_0|NZ_CP037426.1_570862_572602_+	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|269aa|down_0|NZ_CP037426.1_573477_574284_-	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only]	NA|97aa|down_1|NZ_CP037426.1_574461_574752_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|550aa|down_2|NZ_CP037426.1_574852_576502_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|73aa|down_3|NZ_CP037426.1_576773_576992_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|down_4|NZ_CP037426.1_577056_577404_+	pfam01710, HTH_Tnp_IS630, Transposase	NA|164aa|down_5|NZ_CP037426.1_577423_577915_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|1038aa|down_6|NZ_CP037426.1_578226_581340_-	pfam13116, DUF3971, Protein of unknown function	NA|146aa|down_7|NZ_CP037426.1_581332_581770_-	PRK00203, rnhA, ribonuclease H; Reviewed	NA|296aa|down_8|NZ_CP037426.1_581937_582825_-	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|517aa|down_9|NZ_CP037426.1_582826_584377_-	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	9	647225-647338	8	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	GAGATACCGCGAATGAATCGCGGTATGAC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3	NA|547aa|up_9|NZ_CP037426.1_629486_631127_-,NA|463aa|up_7|NZ_CP037426.1_636265_637654_-,NA|429aa|up_4|NZ_CP037426.1_640406_641693_+,NA|813aa|up_3|NZ_CP037426.1_641724_644163_+,NA|161aa|up_2|NZ_CP037426.1_644415_644898_+,NA|59aa|up_0|NZ_CP037426.1_646832_647009_-,NA	NA|547aa|up_9|NZ_CP037426.1_629486_631127_-	NA	NA|278aa|up_8|NZ_CP037426.1_632579_633412_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|463aa|up_7|NZ_CP037426.1_636265_637654_-	NA	NA|152aa|up_6|NZ_CP037426.1_638065_638521_-	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|102aa|up_5|NZ_CP037426.1_638752_639058_-	pfam08388, GIIM, Group II intron, maturase-specific domain	NA|429aa|up_4|NZ_CP037426.1_640406_641693_+	NA	NA|813aa|up_3|NZ_CP037426.1_641724_644163_+	NA	NA|161aa|up_2|NZ_CP037426.1_644415_644898_+	NA	NA|278aa|up_1|NZ_CP037426.1_645677_646510_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|59aa|up_0|NZ_CP037426.1_646832_647009_-	NA	NA|448aa|down_0|NZ_CP037426.1_647428_648772_+	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|304aa|down_1|NZ_CP037426.1_648758_649670_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|128aa|down_2|NZ_CP037426.1_649850_650234_+	PRK11325, PRK11325, scaffold protein; Provisional	NA|138aa|down_3|NZ_CP037426.1_650246_650660_+	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein	NA|153aa|down_4|NZ_CP037426.1_650652_651111_+	PRK05014, hscB, co-chaperone HscB; Provisional	NA|583aa|down_5|NZ_CP037426.1_651088_652837_+	TIGR01991, HscA, Fe-S protein assembly chaperone HscA	NA|249aa|down_6|NZ_CP037426.1_652844_653591_-	PRK10861, PRK10861, signal peptidase I	NA|296aa|down_7|NZ_CP037426.1_654539_655427_-	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|342aa|down_8|NZ_CP037426.1_655630_656656_-	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|164aa|down_9|NZ_CP037426.1_657135_657627_-	pfam13358, DDE_3, DDE superfamily endonuclease
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	10	659899-660012	9	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	CGTCATCCCGCTACGTGTTAGCGGGATCT	29	1	2	659928-659983|659928-659983	NZ_CP037426.1_299969-300024|NZ_CP037426.1_609961-609906	NA	1	1	Orphan	DEDDh,RT,cas3	NA,NA|78aa|down_2|NZ_CP037426.1_661969_662203_+,NA|152aa|down_7|NZ_CP037426.1_668251_668707_+	NA|128aa|up_9|NZ_CP037426.1_649850_650234_+	PRK11325, PRK11325, scaffold protein; Provisional	NA|138aa|up_8|NZ_CP037426.1_650246_650660_+	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein	NA|153aa|up_7|NZ_CP037426.1_650652_651111_+	PRK05014, hscB, co-chaperone HscB; Provisional	NA|583aa|up_6|NZ_CP037426.1_651088_652837_+	TIGR01991, HscA, Fe-S protein assembly chaperone HscA	NA|249aa|up_5|NZ_CP037426.1_652844_653591_-	PRK10861, PRK10861, signal peptidase I	NA|296aa|up_4|NZ_CP037426.1_654539_655427_-	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|342aa|up_3|NZ_CP037426.1_655630_656656_-	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|164aa|up_2|NZ_CP037426.1_657135_657627_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|up_1|NZ_CP037426.1_657646_657994_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|488aa|up_0|NZ_CP037426.1_658382_659846_+	COG5410, COG5410, Uncharacterized protein conserved in bacteria [Function unknown]	NA|326aa|down_0|NZ_CP037426.1_660123_661101_-	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|206aa|down_1|NZ_CP037426.1_661100_661718_-	PRK14341, PRK14341, lipoyl(octanoyl) transferase LipB	NA|78aa|down_2|NZ_CP037426.1_661969_662203_+	NA	NA|88aa|down_3|NZ_CP037426.1_662178_662442_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|398aa|down_4|NZ_CP037426.1_662677_663871_+	COG4695, COG4695, Phage-related protein [Function unknown]	NA|848aa|down_5|NZ_CP037426.1_663925_666469_-	pfam13502, AsmA_2, AsmA-like C-terminal region	NA|496aa|down_6|NZ_CP037426.1_666472_667960_-	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|152aa|down_7|NZ_CP037426.1_668251_668707_+	NA	NA|641aa|down_8|NZ_CP037426.1_668818_670741_+	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|556aa|down_9|NZ_CP037426.1_670749_672417_+	cd01085, APP, X-Prolyl Aminopeptidase 2
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	11	695394-695490	10	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	CTTGTTAGCGGCTGAGATACCGCG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3	NA|62aa|up_8|NZ_CP037426.1_683939_684125_-,NA|46aa|up_3|NZ_CP037426.1_687934_688072_+,NA|88aa|up_2|NZ_CP037426.1_688159_688423_+,NA|61aa|down_2|NZ_CP037426.1_698382_698565_+,NA|133aa|down_7|NZ_CP037426.1_704977_705376_-	NA|164aa|up_9|NZ_CP037426.1_683441_683933_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|62aa|up_8|NZ_CP037426.1_683939_684125_-	NA	NA|115aa|up_7|NZ_CP037426.1_684512_684857_-	cd12152, F1-ATPase_delta, mitochondrial ATP synthase delta subunit	NA|476aa|up_6|NZ_CP037426.1_684869_686297_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|363aa|up_5|NZ_CP037426.1_686398_687487_-	TIGR02138, phosphate_transport_system_permease_protein_PstC, phosphate ABC transporter, permease protein PstC	NA|45aa|up_4|NZ_CP037426.1_687594_687729_+	PRK00399, rpmH, 50S ribosomal protein L34; Reviewed	NA|46aa|up_3|NZ_CP037426.1_687934_688072_+	NA	NA|88aa|up_2|NZ_CP037426.1_688159_688423_+	NA	NA|359aa|up_1|NZ_CP037426.1_691782_692859_+	COG4976, COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only]	NA|595aa|up_0|NZ_CP037426.1_692917_694702_+	PRK09102, PRK09102, ribonucleoside-diphosphate reductase subunit alpha	NA|521aa|down_0|NZ_CP037426.1_695671_697234_+	PRK00074, guaA, GMP synthase; Reviewed	NA|241aa|down_1|NZ_CP037426.1_697262_697985_-	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]	NA|61aa|down_2|NZ_CP037426.1_698382_698565_+	NA	NA|273aa|down_3|NZ_CP037426.1_698750_699569_+	sd00045, ANK, ankyrin repeats	NA|116aa|down_4|NZ_CP037426.1_699673_700021_+	pfam01710, HTH_Tnp_IS630, Transposase	NA|164aa|down_5|NZ_CP037426.1_700040_700532_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|832aa|down_6|NZ_CP037426.1_701492_703988_+	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|133aa|down_7|NZ_CP037426.1_704977_705376_-	NA	NA|393aa|down_8|NZ_CP037426.1_705509_706688_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|196aa|down_9|NZ_CP037426.1_706998_707586_+	cd02022, DPCK, Dephospho-coenzyme A kinase (DPCK, EC 2
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	12	1164173-1164269	11	CRISPRCasFinder	no	cas3	DEDDh,RT,cas3	Unclear	CGCTAACAAGCAGCGGGATAACG	23	1	1	1164196-1164246	NZ_CP037426.1_532939-532989	NA	1	1	Unclear	DEDDh,RT,cas3	NA|481aa|up_9|NZ_CP037426.1_1151148_1152591_+,NA|74aa|up_8|NZ_CP037426.1_1152917_1153139_+,NA|732aa|up_7|NZ_CP037426.1_1153182_1155378_+,NA|72aa|up_3|NZ_CP037426.1_1160503_1160719_-,NA|189aa|up_1|NZ_CP037426.1_1163241_1163808_+,NA|96aa|up_0|NZ_CP037426.1_1163823_1164111_-,NA|61aa|down_5|NZ_CP037426.1_1171739_1171922_+	NA|481aa|up_9|NZ_CP037426.1_1151148_1152591_+	NA	NA|74aa|up_8|NZ_CP037426.1_1152917_1153139_+	NA	NA|732aa|up_7|NZ_CP037426.1_1153182_1155378_+	NA	NA|495aa|up_6|NZ_CP037426.1_1157023_1158508_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|291aa|up_5|NZ_CP037426.1_1158511_1159384_-	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|345aa|up_4|NZ_CP037426.1_1159386_1160421_-	cd03404, SPFH_HflK, High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|72aa|up_3|NZ_CP037426.1_1160503_1160719_-	NA	NA|508aa|up_2|NZ_CP037426.1_1160874_1162398_+	COG5422, ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]	NA|189aa|up_1|NZ_CP037426.1_1163241_1163808_+	NA	NA|96aa|up_0|NZ_CP037426.1_1163823_1164111_-	NA	cas3|674aa|down_0|NZ_CP037426.1_1165001_1167023_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|164aa|down_1|NZ_CP037426.1_1167230_1167722_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|down_2|NZ_CP037426.1_1167741_1168089_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|266aa|down_3|NZ_CP037426.1_1169636_1170434_-	pfam13507, GATase_5, CobB/CobQ-like glutamine amidotransferase domain	NA|417aa|down_4|NZ_CP037426.1_1170440_1171691_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|61aa|down_5|NZ_CP037426.1_1171739_1171922_+	NA	NA|126aa|down_6|NZ_CP037426.1_1171970_1172348_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|237aa|down_7|NZ_CP037426.1_1172331_1173042_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|241aa|down_8|NZ_CP037426.1_1173116_1173839_+	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed	NA|346aa|down_9|NZ_CP037426.1_1173835_1174873_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	13	1229908-1230013	12	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	CGTCATTCCGCTACTAGTTAGCGGA	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3	NA|182aa|up_2|NZ_CP037426.1_1227563_1228109_+,NA|265aa|down_2|NZ_CP037426.1_1232557_1233352_-,NA|157aa|down_5|NZ_CP037426.1_1234970_1235441_-,NA|273aa|down_7|NZ_CP037426.1_1236397_1237216_-	NA|603aa|up_9|NZ_CP037426.1_1217820_1219629_+	pfam13624, SurA_N_3, SurA N-terminal domain	NA|107aa|up_8|NZ_CP037426.1_1220030_1220351_+	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|329aa|up_7|NZ_CP037426.1_1220361_1221348_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|190aa|up_6|NZ_CP037426.1_1221409_1221979_+	cd00446, GrpE, nucleotide exchange factor GrpE	NA|333aa|up_5|NZ_CP037426.1_1221996_1222995_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|254aa|up_4|NZ_CP037426.1_1223170_1223932_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|176aa|up_3|NZ_CP037426.1_1223933_1224461_-	COG3474, COG3474, Cytochrome c2 [Energy production and conversion]	NA|182aa|up_2|NZ_CP037426.1_1227563_1228109_+	NA	NA|423aa|up_1|NZ_CP037426.1_1228211_1229480_+	PRK12325, PRK12325, prolyl-tRNA synthetase; Provisional	NA|119aa|up_0|NZ_CP037426.1_1229476_1229833_+	PRK14659, acpS, holo-[acyl-carrier-protein] synthase	NA|499aa|down_0|NZ_CP037426.1_1230333_1231830_+	PRK06589, PRK06589, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|221aa|down_1|NZ_CP037426.1_1231826_1232489_-	COG3736, VirB8, Type IV secretory pathway, component VirB8 [Intracellular trafficking and secretion]	NA|265aa|down_2|NZ_CP037426.1_1232557_1233352_-	NA	NA|274aa|down_3|NZ_CP037426.1_1233425_1234247_-	TIGR00678, DNA_polymerase_III_subunit_delta', DNA polymerase III, delta' subunit	NA|196aa|down_4|NZ_CP037426.1_1234264_1234852_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|157aa|down_5|NZ_CP037426.1_1234970_1235441_-	NA	NA|295aa|down_6|NZ_CP037426.1_1235516_1236401_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|273aa|down_7|NZ_CP037426.1_1236397_1237216_-	NA	NA|278aa|down_8|NZ_CP037426.1_1237375_1238208_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|164aa|down_9|NZ_CP037426.1_1238244_1238736_-	pfam13358, DDE_3, DDE superfamily endonuclease
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	14	1242425-1242550	13	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	CTGGATCCAAGTAGTCAAGGCACTGGGATGACA	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3	NA|157aa|up_7|NZ_CP037426.1_1234970_1235441_-,NA|273aa|up_5|NZ_CP037426.1_1236397_1237216_-,NA|284aa|down_0|NZ_CP037426.1_1242847_1243699_-,NA|70aa|down_3|NZ_CP037426.1_1246002_1246212_-,NA|171aa|down_8|NZ_CP037426.1_1253776_1254289_+	NA|274aa|up_9|NZ_CP037426.1_1233425_1234247_-	TIGR00678, DNA_polymerase_III_subunit_delta', DNA polymerase III, delta' subunit	NA|196aa|up_8|NZ_CP037426.1_1234264_1234852_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|157aa|up_7|NZ_CP037426.1_1234970_1235441_-	NA	NA|295aa|up_6|NZ_CP037426.1_1235516_1236401_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|273aa|up_5|NZ_CP037426.1_1236397_1237216_-	NA	NA|278aa|up_4|NZ_CP037426.1_1237375_1238208_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|164aa|up_3|NZ_CP037426.1_1238244_1238736_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|116aa|up_2|NZ_CP037426.1_1238755_1239103_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|116aa|up_1|NZ_CP037426.1_1240590_1240938_+	pfam01710, HTH_Tnp_IS630, Transposase	NA|164aa|up_0|NZ_CP037426.1_1240957_1241449_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|284aa|down_0|NZ_CP037426.1_1242847_1243699_-	NA	NA|136aa|down_1|NZ_CP037426.1_1244569_1244977_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|244aa|down_2|NZ_CP037426.1_1245155_1245887_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|70aa|down_3|NZ_CP037426.1_1246002_1246212_-	NA	NA|278aa|down_4|NZ_CP037426.1_1246208_1247041_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|126aa|down_5|NZ_CP037426.1_1247193_1247571_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|937aa|down_6|NZ_CP037426.1_1247687_1250498_-	TIGR02786, conserved_hypothetical_protein, double-strand break repair protein AddB, alphaproteobacterial type	NA|1032aa|down_7|NZ_CP037426.1_1250585_1253681_+	COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism]	NA|171aa|down_8|NZ_CP037426.1_1253776_1254289_+	NA	NA|932aa|down_9|NZ_CP037426.1_1254923_1257719_+	PRK00349, uvrA, excinuclease ABC subunit UvrA
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	15	1296567-1296661	14	CRISPRCasFinder	no		DEDDh,RT,cas3	Orphan	CGTCATCCCGCTACGTGTTAGCGG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3	NA,NA	NA|51aa|up_9|NZ_CP037426.1_1287329_1287482_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|278aa|up_8|NZ_CP037426.1_1287601_1288434_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|253aa|up_7|NZ_CP037426.1_1288685_1289444_-	pfam02167, Cytochrom_C1, Cytochrome C1 family	NA|410aa|up_6|NZ_CP037426.1_1289812_1291042_-	MTH00156, CYTB, cytochrome b; Provisional	NA|57aa|up_5|NZ_CP037426.1_1291146_1291317_-	PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional	NA|526aa|up_4|NZ_CP037426.1_1291337_1292915_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|120aa|up_3|NZ_CP037426.1_1292934_1293294_-	PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional	NA|191aa|up_2|NZ_CP037426.1_1293355_1293928_+	pfam08712, Nfu_N, Scaffold protein Nfu/NifU N terminal	NA|409aa|up_1|NZ_CP037426.1_1293924_1295151_+	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|251aa|up_0|NZ_CP037426.1_1295171_1295924_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|448aa|down_0|NZ_CP037426.1_1296857_1298201_-	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|520aa|down_1|NZ_CP037426.1_1298185_1299745_-	PRK12664, PRK12664, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|958aa|down_2|NZ_CP037426.1_1300048_1302922_-	PRK06567, PRK06567, putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated	NA|144aa|down_3|NZ_CP037426.1_1302967_1303399_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|184aa|down_4|NZ_CP037426.1_1303403_1303955_-	smart00935, OmpH, Outer membrane protein (OmpH-like)	NA|779aa|down_5|NZ_CP037426.1_1303955_1306292_-	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein	NA|373aa|down_6|NZ_CP037426.1_1306300_1307419_-	COG0750, COG0750, Predicted membrane-associated Zn-dependent proteases 1 [Cell envelope biogenesis, outer membrane]	NA|93aa|down_7|NZ_CP037426.1_1307518_1307797_+	pfam03937, Sdh5, Flavinator of succinate dehydrogenase	NA|109aa|down_8|NZ_CP037426.1_1307771_1308098_-	COG3027, zapA, Cell division protein ZapA (stimulator of FtsZ polymerization and Z-ring component) [Cell cycle control, cell division,    chromosome partitioning]	NA|93aa|down_9|NZ_CP037426.1_1308170_1308449_-	cd13836, IHF_B, Beta subunit of integration host factor (IHFB)
GCF_009732755.1_ASM973275v1	NZ_CP037426	Wolbachia pipientis strain wIrr chromosome, complete genome	16	1341033-1341520	3	CRT	no		DEDDh,RT,cas3	Orphan	TAGATCCCGCTAACACGTAGCGGGAT	26	3	4	1341225-1341271|1341379-1341425|1341452-1341494|1341452-1341494	NZ_CP037426.1_647192-647146|NZ_CP037426.1_647192-647146|NZ_CP037426.1_533130-533172|NZ_CP037426.1_647119-647077	NA	6	6	Orphan	DEDDh,RT,cas3	NA,NA|244aa|down_5|NZ_CP037426.1_1350555_1351287_+	NA|136aa|up_9|NZ_CP037426.1_1327766_1328174_-	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed	NA|99aa|up_8|NZ_CP037426.1_1328234_1328531_-	pfam13744, HTH_37, Helix-turn-helix domain	NA|167aa|up_7|NZ_CP037426.1_1328958_1329459_+	pfam00731, AIRC, AIR carboxylase	NA|606aa|up_6|NZ_CP037426.1_1329466_1331284_+	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|882aa|up_5|NZ_CP037426.1_1332487_1335133_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|263aa|up_4|NZ_CP037426.1_1335378_1336167_+	PRK00089, era, GTPase Era; Reviewed	NA|199aa|up_3|NZ_CP037426.1_1336290_1336887_-	TIGR02217, conserved_hypothetical_protein, TIGR02217 family protein	NA|253aa|up_2|NZ_CP037426.1_1337084_1337843_-	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|360aa|up_1|NZ_CP037426.1_1338263_1339343_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|493aa|up_0|NZ_CP037426.1_1339430_1340909_+	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism]	NA|286aa|down_0|NZ_CP037426.1_1342060_1342918_-	PRK12847, ubiA, 4-hydroxybenzoate octaprenyltransferase	NA|133aa|down_1|NZ_CP037426.1_1342921_1343320_-	pfam02033, RBFA, Ribosome-binding factor A	NA|775aa|down_2|NZ_CP037426.1_1343329_1345654_-	PRK05306, infB, translation initiation factor IF-2; Validated	NA|521aa|down_3|NZ_CP037426.1_1345663_1347226_-	PRK09202, nusA, transcription elongation factor NusA; Validated	NA|1022aa|down_4|NZ_CP037426.1_1347314_1350380_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|244aa|down_5|NZ_CP037426.1_1350555_1351287_+	NA	NA|246aa|down_6|NZ_CP037426.1_1351290_1352028_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|NA	NA	NA|NA	NA	NA|NA	NA
