assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009734485.1_ASM973448v1	NZ_CP046445	Leclercia sp. 119287 chromosome, complete genome	1	1703213-1703335	1	CRISPRCasFinder	no		RT,cas3,WYL,csa3,DEDDh,DinG	Orphan	TAGGCCGGGTAAGGCGAAGCCCGCCACCCGGCA	33	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,csa3,DEDDh,DinG	NA,NA	NA|397aa|up_9|NZ_CP046445.1_1688690_1689881_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|360aa|up_8|NZ_CP046445.1_1690065_1691145_-	PRK10554, PRK10554, outer membrane porin protein C; Provisional	NA|467aa|up_7|NZ_CP046445.1_1691754_1693155_-	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated	NA|154aa|up_6|NZ_CP046445.1_1693330_1693792_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|405aa|up_5|NZ_CP046445.1_1693999_1695214_+	TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammonia-lyase	NA|429aa|up_4|NZ_CP046445.1_1695331_1696618_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|413aa|up_3|NZ_CP046445.1_1696641_1697880_+	PRK12893, PRK12893, Zn-dependent hydrolase	NA|388aa|up_2|NZ_CP046445.1_1697898_1699062_+	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|401aa|up_1|NZ_CP046445.1_1699110_1700313_-	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional	NA|871aa|up_0|NZ_CP046445.1_1700577_1703190_+	PRK14015, pepN, aminopeptidase N; Provisional	NA|256aa|down_0|NZ_CP046445.1_1703337_1704105_-	PRK11247, ssuB, aliphatic sulfonates transport ATP-binding subunit; Provisional	NA|264aa|down_1|NZ_CP046445.1_1704101_1704893_-	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC	NA|382aa|down_2|NZ_CP046445.1_1704902_1706048_-	PRK00719, PRK00719, alkanesulfonate monooxygenase; Provisional	NA|321aa|down_3|NZ_CP046445.1_1706044_1707007_-	PRK11553, PRK11553, alkanesulfonate transporter substrate-binding subunit; Provisional	NA|178aa|down_4|NZ_CP046445.1_1707041_1707575_-	PRK10569, PRK10569, NAD(P)H-dependent FMN reductase; Provisional	NA|337aa|down_5|NZ_CP046445.1_1707823_1708834_+	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase	NA|179aa|down_6|NZ_CP046445.1_1709002_1709539_+	pfam07126, ZapC, Cell-division protein ZapC	NA|370aa|down_7|NZ_CP046445.1_1709535_1710645_-	COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only]	NA|703aa|down_8|NZ_CP046445.1_1710744_1712853_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|636aa|down_9|NZ_CP046445.1_1712865_1714773_+	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed
GCF_009734485.1_ASM973448v1	NZ_CP046445	Leclercia sp. 119287 chromosome, complete genome	2	2165927-2166057	2	CRISPRCasFinder	no	DEDDh	RT,cas3,WYL,csa3,DEDDh,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,csa3,DEDDh,DinG	NA|47aa|up_7|NZ_CP046445.1_2157362_2157503_-,NA|30aa|down_6|NZ_CP046445.1_2173482_2173572_+	NA|208aa|up_9|NZ_CP046445.1_2156079_2156703_+	COG4566, TtrR, Response regulator [Signal transduction mechanisms]	NA|161aa|up_8|NZ_CP046445.1_2156780_2157263_+	pfam03928, Haem_degrading, Haem-degrading	NA|47aa|up_7|NZ_CP046445.1_2157362_2157503_-	NA	NA|273aa|up_6|NZ_CP046445.1_2157630_2158449_+	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain	NA|212aa|up_5|NZ_CP046445.1_2158492_2159128_+	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|537aa|up_4|NZ_CP046445.1_2159209_2160820_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|800aa|up_3|NZ_CP046445.1_2161117_2163517_+	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	NA|211aa|up_2|NZ_CP046445.1_2163500_2164133_+	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit	NA|278aa|up_1|NZ_CP046445.1_2164125_2164959_+	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only]	NA|292aa|up_0|NZ_CP046445.1_2164958_2165834_+	cd03110, SIMIBI_bact_arch, bacterial and archaeal subfamily of SIMIBI	NA|458aa|down_0|NZ_CP046445.1_2166215_2167589_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|215aa|down_1|NZ_CP046445.1_2167812_2168457_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_2|NZ_CP046445.1_2168491_2169640_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|399aa|down_3|NZ_CP046445.1_2169920_2171117_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_4|NZ_CP046445.1_2171232_2172165_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_5|NZ_CP046445.1_2172161_2173187_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_6|NZ_CP046445.1_2173482_2173572_+	NA	NA|389aa|down_7|NZ_CP046445.1_2173736_2174903_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|NZ_CP046445.1_2174938_2175520_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|268aa|down_9|NZ_CP046445.1_2175642_2176446_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]
GCF_009734485.1_ASM973448v1	NZ_CP046445	Leclercia sp. 119287 chromosome, complete genome	3	3769488-3769582	3	CRISPRCasFinder	no		RT,cas3,WYL,csa3,DEDDh,DinG	Orphan	GTCCGGGCGGGATATGACCCTGA	23	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,csa3,DEDDh,DinG	NA|171aa|up_3|NZ_CP046445.1_3761061_3761574_-,NA|161aa|down_1|NZ_CP046445.1_3773771_3774254_+,NA|92aa|down_2|NZ_CP046445.1_3774333_3774609_+,NA|82aa|down_3|NZ_CP046445.1_3774707_3774953_+,NA|154aa|down_5|NZ_CP046445.1_3775992_3776454_+,NA|112aa|down_7|NZ_CP046445.1_3777895_3778231_+	NA|291aa|up_9|NZ_CP046445.1_3754736_3755609_+	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism]	NA|468aa|up_8|NZ_CP046445.1_3755684_3757088_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|337aa|up_7|NZ_CP046445.1_3757087_3758098_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|329aa|up_6|NZ_CP046445.1_3759082_3760069_-	PRK07109, PRK07109, short chain dehydrogenase; Provisional	NA|175aa|up_5|NZ_CP046445.1_3760078_3760603_-	PRK03657, PRK03657, 2-oxo-tetronate isomerase	NA|151aa|up_4|NZ_CP046445.1_3760599_3761052_-	COG2323, COG2323, Predicted membrane protein [Function unknown]	NA|171aa|up_3|NZ_CP046445.1_3761061_3761574_-	NA	NA|131aa|up_2|NZ_CP046445.1_3761716_3762109_+	PRK10053, PRK10053, YdeI family stress tolerance OB fold protein	NA|560aa|up_1|NZ_CP046445.1_3762330_3764010_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|183aa|up_0|NZ_CP046445.1_3764009_3764558_+	pfam02794, HlyC, RTX toxin acyltransferase family	NA|111aa|down_0|NZ_CP046445.1_3773144_3773477_+	PRK04293, PRK04293, adenylosuccinate synthetase; Provisional	NA|161aa|down_1|NZ_CP046445.1_3773771_3774254_+	NA	NA|92aa|down_2|NZ_CP046445.1_3774333_3774609_+	NA	NA|82aa|down_3|NZ_CP046445.1_3774707_3774953_+	NA	NA|140aa|down_4|NZ_CP046445.1_3775180_3775600_+	pfam14567, SUKH_5, SMI1-KNR4 cell-wall	NA|154aa|down_5|NZ_CP046445.1_3775992_3776454_+	NA	NA|181aa|down_6|NZ_CP046445.1_3776951_3777494_+	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1)	NA|112aa|down_7|NZ_CP046445.1_3777895_3778231_+	NA	NA|187aa|down_8|NZ_CP046445.1_3778445_3779006_+	PRK15240, PRK15240, resistance to complement killing; Provisional	NA|298aa|down_9|NZ_CP046445.1_3779098_3779992_-	cd08477, PBP2_CrgA_like_8, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold
GCF_009734485.1_ASM973448v1	NZ_CP046445	Leclercia sp. 119287 chromosome, complete genome	4	4168057-4168143	4	CRISPRCasFinder	no		RT,cas3,WYL,csa3,DEDDh,DinG	Orphan	CGGTTCATCCCCCAGATGCGGGGAAC	26	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,WYL,csa3,DEDDh,DinG	NA|232aa|up_3|NZ_CP046445.1_4164834_4165530_+,NA|186aa|up_0|NZ_CP046445.1_4167220_4167778_+,NA|248aa|down_4|NZ_CP046445.1_4173384_4174128_+,NA|184aa|down_9|NZ_CP046445.1_4180223_4180775_+	NA|224aa|up_9|NZ_CP046445.1_4157662_4158334_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|338aa|up_8|NZ_CP046445.1_4158351_4159365_-	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|72aa|up_7|NZ_CP046445.1_4159601_4159817_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|582aa|up_6|NZ_CP046445.1_4160053_4161799_+	PRK05667, dnaG, DNA primase; Validated	NA|616aa|up_5|NZ_CP046445.1_4161948_4163796_+	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|169aa|up_4|NZ_CP046445.1_4164009_4164516_-	PRK10201, PRK10201, G/U mismatch-specific DNA glycosylase	NA|232aa|up_3|NZ_CP046445.1_4164834_4165530_+	NA	NA|74aa|up_2|NZ_CP046445.1_4165738_4165960_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|372aa|up_1|NZ_CP046445.1_4166077_4167193_+	pfam11726, Inovirus_Gp2, Inovirus Gp2	NA|186aa|up_0|NZ_CP046445.1_4167220_4167778_+	NA	NA|103aa|down_0|NZ_CP046445.1_4170493_4170802_-	PRK10244, PRK10244, anti-adapter protein IraP	NA|422aa|down_1|NZ_CP046445.1_4171030_4172296_+	PRK13289, PRK13289, NO-inducible flavohemoprotein	NA|77aa|down_2|NZ_CP046445.1_4172717_4172948_+	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown]	NA|139aa|down_3|NZ_CP046445.1_4172944_4173361_+	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins	NA|248aa|down_4|NZ_CP046445.1_4173384_4174128_+	NA	NA|190aa|down_5|NZ_CP046445.1_4175168_4175738_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|232aa|down_6|NZ_CP046445.1_4175796_4176492_+	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|798aa|down_7|NZ_CP046445.1_4176503_4178897_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|340aa|down_8|NZ_CP046445.1_4178917_4179937_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|184aa|down_9|NZ_CP046445.1_4180223_4180775_+	NA
