The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040342	Bacillus cereus strain DLOU-Weihai chromosome, complete genome	5291741	845633	854009	5291741		Synechococcus_phage(50.0%)	8	NA	NA
WP_000088589.1|845633_846221_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	9.1e-28
WP_001262439.1|846217_847258_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	45.9	1.2e-67
WP_000879025.1|847363_848779_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	3.3e-55
WP_000055562.1|848763_850983_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	41.2	2.6e-163
WP_000666786.1|850966_851650_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000278823.1|851646_851901_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_001170544.1|851893_852613_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	4.0e-49
WP_000625682.1|852701_854009_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.3	4.9e-21
>prophage 2
NZ_CP040342	Bacillus cereus strain DLOU-Weihai chromosome, complete genome	5291741	899579	907526	5291741		Bacillus_phage(33.33%)	6	NA	NA
WP_152122862.1|899579_901085_-	aminopeptidase AmpS	NA	W8CYF6	Bacillus_phage	29.8	1.2e-31
WP_000929885.1|901068_901770_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.9	7.3e-40
WP_000833096.1|901914_903240_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.4	4.1e-44
WP_000743909.1|903623_905162_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.7	8.8e-22
WP_016124214.1|905568_907203_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	58.0	9.0e-158
WP_000917311.1|907241_907526_-	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	54.8	1.2e-20
>prophage 3
NZ_CP040342	Bacillus cereus strain DLOU-Weihai chromosome, complete genome	5291741	2061859	2069545	5291741		uncultured_Caudovirales_phage(16.67%)	9	NA	NA
WP_001036848.1|2061859_2062843_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.2	1.1e-17
WP_000403758.1|2062832_2063603_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.1	3.7e-13
WP_001086120.1|2063635_2064400_+	class B sortase	NA	NA	NA	NA	NA
WP_000587820.1|2064472_2064796_-	heme oxygenase	NA	NA	NA	NA	NA
WP_001255971.1|2065091_2066291_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	41.2	1.6e-71
WP_001014310.1|2066329_2066524_-	YwbE family protein	NA	NA	NA	NA	NA
WP_000018029.1|2066866_2067559_+	response regulator transcription factor	NA	B5LWA6	Feldmannia_species_virus	28.8	1.4e-06
WP_049107067.1|2067560_2068496_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	24.8	1.2e-21
WP_000221066.1|2068621_2069545_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.5	1.5e-45
>prophage 4
NZ_CP040342	Bacillus cereus strain DLOU-Weihai chromosome, complete genome	5291741	2846348	2908299	5291741	holin,capsid,tail,protease,integrase,head,portal,tRNA,terminase	Bacillus_phage(42.22%)	67	2850709:2850723	2866651:2866665
WP_006922262.1|2846348_2847302_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_000813896.1|2847323_2847548_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_157418535.1|2847628_2850994_-	Gly-Xaa-Xaa repeat protein	NA	NA	NA	NA	NA
2850709:2850723	attL	AGTTTTTAATGATAG	NA	NA	NA	NA
WP_000450326.1|2851107_2852073_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_000312266.1|2853410_2854034_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_000391407.1|2854126_2855401_+	GTPase HflX	NA	NA	NA	NA	NA
WP_000460304.1|2855393_2856665_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000656783.1|2856849_2857239_+	transcriptional repressor GlnR	NA	NA	NA	NA	NA
WP_000092763.1|2857287_2858622_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_157418536.1|2858736_2859882_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0M5M609	Bacillus_phage	38.2	3.3e-66
WP_088071103.1|2860107_2860536_-	ImmA/IrrE family metallo-endopeptidase	NA	Q9T201	Bacillus_phage	55.1	4.8e-34
WP_078400353.1|2860558_2860987_-	helix-turn-helix transcriptional regulator	NA	Q786F1	Bacillus_phage	48.6	3.0e-28
WP_098256288.1|2861124_2861373_+	helix-turn-helix transcriptional regulator	NA	W8CYU0	Bacillus_phage	62.1	7.8e-13
WP_088071101.1|2861372_2862074_+	Rha family transcriptional regulator	NA	A0A288WFT2	Bacillus_phage	47.7	2.4e-51
WP_098284305.1|2862181_2862457_+	group-specific protein	NA	S5MC08	Brevibacillus_phage	57.0	3.4e-25
WP_157418537.1|2862592_2862796_-	KTSC domain-containing protein	NA	A0A0K1LMB5	Caulobacter_phage	39.1	5.8e-06
WP_157418538.1|2863102_2863420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157418539.1|2863438_2863657_+	hypothetical protein	NA	A0A0M5M3T1	Bacillus_phage	64.8	1.7e-11
WP_088867882.1|2863671_2864154_+	siphovirus Gp157 family protein	NA	E5DV79	Deep-sea_thermophilic_phage	49.4	6.3e-35
WP_000005082.1|2864150_2864822_+	DUF1071 domain-containing protein	NA	A0A1B1P7F0	Bacillus_phage	40.6	5.2e-27
WP_000849731.1|2864835_2865108_+	hypothetical protein	NA	A0A0M4S680	Bacillus_phage	79.8	8.5e-37
WP_000067430.1|2865104_2865869_+	hypothetical protein	NA	A0A1W6JNI1	Staphylococcus_phage	51.7	1.6e-61
WP_157418540.1|2865804_2866635_+	AAA family ATPase	NA	U5PWH5	Bacillus_phage	38.7	2.6e-36
WP_097821077.1|2866658_2866847_+	hypothetical protein	NA	NA	NA	NA	NA
2866651:2866665	attR	AGTTTTTAATGATAG	NA	NA	NA	NA
WP_157418541.1|2867010_2867640_+	hypothetical protein	NA	A0A0M4RU33	Bacillus_phage	41.9	2.2e-27
WP_157418542.1|2867642_2867765_+	Fur-regulated basic protein FbpA	NA	NA	NA	NA	NA
WP_000615362.1|2867859_2868432_+	dUTPase	NA	A0A0A7AQI4	Bacillus_phage	72.7	8.5e-79
WP_157418876.1|2868534_2869614_-	exosporium leader peptide-containing protein	NA	NA	NA	NA	NA
WP_157418543.1|2869856_2870612_+	DNA (cytosine-5-)-methyltransferase	NA	A0A0K2CYZ1	Paenibacillus_phage	50.2	1.3e-66
WP_157418544.1|2870663_2871410_+	FAD-dependent thymidylate synthase	NA	A0A2P1JUN2	Bacillus_phage	63.9	7.7e-80
WP_000520472.1|2871821_2872109_+	hypothetical protein	NA	A6M999	Geobacillus_virus	71.3	1.9e-34
WP_157418545.1|2872113_2872485_+	ArpU family transcriptional regulator	NA	A0A0M4R397	Bacillus_phage	48.0	3.6e-22
WP_157418546.1|2872580_2873240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157418547.1|2873253_2873394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157418548.1|2873959_2874463_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1L2JY33	Aeribacillus_phage	65.3	1.6e-57
WP_157418549.1|2874552_2874960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157418550.1|2874913_2876506_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_157418551.1|2876486_2877671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157418552.1|2877715_2878360_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_098284286.1|2878501_2878834_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_157418553.1|2878866_2879850_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_157418554.1|2880452_2880728_+	helix-turn-helix domain-containing protein	NA	A0A2H4JBQ8	uncultured_Caudovirales_phage	42.5	6.8e-10
WP_157418555.1|2880765_2881536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157418556.1|2881678_2882110_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A1L2JY34	Aeribacillus_phage	59.5	5.3e-41
WP_157418557.1|2882875_2883175_+	HNH endonuclease	NA	R9TNN2	Paenibacillus_phage	62.8	3.0e-27
WP_141529788.1|2883263_2884046_+	HNH endonuclease	NA	A0A0B5A095	Streptococcus_phage	43.0	2.2e-29
WP_000985229.1|2884208_2884580_+	hypothetical protein	NA	A0A2H4JA84	uncultured_Caudovirales_phage	50.5	5.6e-15
WP_157418558.1|2884576_2886265_+|terminase	terminase large subunit	terminase	A0A290GJW3	Caldibacillus_phage	70.9	2.6e-245
WP_157418559.1|2886380_2887442_+	hypothetical protein	NA	D2XPY2	Bacillus_virus	27.5	1.6e-17
WP_078400380.1|2887479_2888691_+|portal	phage portal protein	portal	J9QE83	Clostridium_phage	59.6	5.9e-138
WP_001043897.1|2888656_2889241_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2I7SBY1	Paenibacillus_phage	50.5	1.0e-39
WP_157418560.1|2889254_2890418_+|capsid	phage major capsid protein	capsid	H7BUQ0	unidentified_phage	55.1	1.4e-80
WP_098284281.1|2890454_2890745_+	hypothetical protein	NA	A6XMJ7	Bacillus_virus	36.6	8.3e-06
WP_157418561.1|2890747_2891020_+	DNA-packaging protein	NA	R9TMB7	Paenibacillus_phage	55.1	9.4e-20
WP_044793467.1|2891016_2891316_+|head	phage head closure protein	head	R9TPZ2	Paenibacillus_phage	39.4	9.7e-10
WP_134266081.1|2891308_2891665_+	HK97 gp10 family phage protein	NA	D2XR21	Bacillus_phage	60.3	2.0e-30
WP_157418562.1|2891661_2891991_+	hypothetical protein	NA	A0A2H4JAG4	uncultured_Caudovirales_phage	83.5	4.9e-47
WP_044793464.1|2891991_2892585_+|tail	phage tail protein	tail	A0A2H4JDV4	uncultured_Caudovirales_phage	83.6	1.2e-91
WP_000415944.1|2892589_2892952_+	hypothetical protein	NA	A0A2H4JAG8	uncultured_Caudovirales_phage	74.8	9.2e-47
WP_157418563.1|2894666_2895521_+	hypothetical protein	NA	A0A2C9CXT1	Yersinia_phage	44.2	6.9e-08
WP_157418877.1|2895703_2898052_+	hypothetical protein	NA	D2XR26	Bacillus_phage	68.0	5.3e-10
WP_157418564.1|2898093_2899566_+|tail	phage tail family protein	tail	D2XPZ5	Bacillus_virus	71.9	7.7e-217
WP_157418565.1|2899562_2905613_+	peptidase S74	NA	D2XR28	Bacillus_phage	42.1	0.0e+00
WP_088065444.1|2905651_2906077_+|holin	phage holin family protein	holin	A0A1B1P787	Bacillus_phage	98.6	6.3e-71
WP_157418566.1|2906076_2907009_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0S2MVR5	Bacillus_phage	84.2	3.3e-157
WP_043356261.1|2907558_2907798_+	helix-turn-helix domain-containing protein	NA	A0A2H4JBQ8	uncultured_Caudovirales_phage	96.2	1.0e-33
WP_049106735.1|2907966_2908299_-	hypothetical protein	NA	A0A1B1P7R0	Bacillus_phage	60.7	3.1e-25
>prophage 5
NZ_CP040342	Bacillus cereus strain DLOU-Weihai chromosome, complete genome	5291741	4603287	4611388	5291741		Bacillus_phage(66.67%)	7	NA	NA
WP_157418797.1|4603287_4604160_-	aminoglycoside 6-adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	45.1	3.7e-65
WP_000818985.1|4604450_4605170_-	3-ketoacyl-ACP reductase	NA	W8CYX9	Bacillus_phage	100.0	5.9e-61
WP_157418798.1|4605397_4606471_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	97.5	5.1e-186
WP_016124455.1|4606467_4607145_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	98.2	3.7e-121
WP_065704339.1|4607230_4608991_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	98.2	1.8e-273
WP_001194306.1|4609231_4609996_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_157418799.1|4610095_4611388_-	SH3 domain-containing protein	NA	A0A1V0DZX6	Clostridioides_phage	31.5	3.5e-11
>prophage 6
NZ_CP040342	Bacillus cereus strain DLOU-Weihai chromosome, complete genome	5291741	5124283	5131923	5291741		Bacillus_virus(50.0%)	8	NA	NA
WP_000528788.1|5124283_5125186_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.1	2.2e-36
WP_000843921.1|5125200_5125983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000137745.1|5125979_5126678_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	28.4	3.4e-13
WP_000687512.1|5126674_5127055_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_157418853.1|5127271_5127673_-	ribonucleoside-diphosphate reductase	NA	G3MBF3	Bacillus_virus	69.5	4.9e-49
WP_000274263.1|5127796_5128570_-	nuclease	NA	A0A2P0PAD9	Pectobacterium_phage	37.9	2.7e-11
WP_157418854.1|5129492_5131577_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	G3MBF2	Bacillus_virus	73.4	3.6e-300
WP_000959447.1|5131563_5131923_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	60.5	1.9e-36
>prophage 1
NZ_CP040343	Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence	350199	1647	8916	350199	transposase	Clostridium_phage(28.57%)	9	NA	NA
WP_001226074.1|1647_2223_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	30.3	4.6e-16
WP_000383881.1|2335_3181_+	AraC family transcriptional regulator	NA	A0A1B0RXG1	Streptococcus_phage	42.9	4.4e-23
WP_033656251.1|3308_3884_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	30.6	5.6e-14
WP_000701227.1|4138_4591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000475617.1|4954_5653_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N6W8I1	Bacillus_phage	47.4	5.2e-46
WP_002009432.1|6066_6576_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_014315595.1|6619_6793_-	HIT family protein	NA	D7NW73	Streptomyces_phage	45.8	7.6e-07
WP_000588560.1|6907_8161_+|transposase	IS21-like element ISBce16 family transposase	transposase	U5N3F9	Enterobacteria_phage	33.2	2.5e-51
WP_000993737.1|8157_8916_+	AAA family ATPase	NA	U5N3V8	Enterobacteria_phage	46.6	1.3e-61
>prophage 2
NZ_CP040343	Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence	350199	135117	189312	350199	protease,transposase,integrase	Bacillus_phage(33.33%)	49	128711:128727	189469:189485
128711:128727	attL	CAAAGAGTTTTCTAATT	NA	NA	NA	NA
WP_078384240.1|135117_136773_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_078384248.1|136744_138025_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_061680256.1|139056_140190_-|integrase	site-specific integrase	integrase	A0A0U3U8Y8	Bacillus_phage	27.3	3.2e-05
WP_157418933.1|140421_141129_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000425107.1|141178_141571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001032086.1|141763_142018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000886566.1|142148_143390_-	glutathionylspermidine synthase	NA	B2ZXR7	Ralstonia_phage	26.0	1.7e-23
WP_000784097.1|143408_144092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000949089.1|144243_144528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000426065.1|144613_144919_-	DUF2325 domain-containing protein	NA	NA	NA	NA	NA
WP_001237722.1|144909_145293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002163382.1|145457_146033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000081398.1|146049_148257_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A7KUS1	Bacillus_phage	40.7	3.0e-15
WP_000884607.1|148253_152234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000878407.1|152264_153233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000914971.1|153524_155357_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.3	1.9e-34
WP_000765116.1|156085_157057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000892011.1|157059_157974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001233525.1|157974_158325_-	PrgI family protein	NA	NA	NA	NA	NA
WP_001216648.1|158391_158811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000727316.1|158960_159149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000118205.1|159357_160281_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_001108764.1|160709_162023_-	DUF3854 domain-containing protein	NA	NA	NA	NA	NA
WP_001048059.1|162012_163788_-	hypothetical protein	NA	A0A0P0ZFK4	Escherichia_phage	46.3	9.2e-23
WP_001027668.1|163900_164452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001165543.1|164800_165616_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000130911.1|165854_166016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001088469.1|166127_166751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000029929.1|166747_167293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000503558.1|167331_169272_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_000844610.1|169288_170374_-	DUF916 and DUF3324 domain-containing protein	NA	NA	NA	NA	NA
WP_000672678.1|170444_171050_-	membrane protein	NA	NA	NA	NA	NA
WP_000879954.1|171121_171328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000879955.1|171400_171604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000956364.1|171672_171876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000201160.1|171918_172785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000555803.1|172786_173719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000264622.1|173711_175148_-	CpaF family protein	NA	NA	NA	NA	NA
WP_000441034.1|175163_175985_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000804792.1|176001_176862_-	Flp pilus assembly protein CpaB	NA	NA	NA	NA	NA
WP_000404241.1|177236_177428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000695233.1|177904_180256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157418934.1|180373_181711_-	cell surface protein	NA	NA	NA	NA	NA
WP_001181745.1|181968_182364_-	DUF4320 family protein	NA	NA	NA	NA	NA
WP_157418935.1|182389_182839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000239320.1|182855_184355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002941.1|184374_185328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000557422.1|186037_187174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000160678.1|188199_189312_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A286QQB7	Streptococcus_phage	45.0	3.3e-79
189469:189485	attR	AATTAGAAAACTCTTTG	NA	NA	NA	NA
