assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009762475.1_ASM976247v1	NZ_CP044305	Escherichia coli strain C27A chromosome, complete genome	1	393818-393914	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	Orphan	GCTTGACGCGTCTTATCAGGCCTACAA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	NA,NA	NA|454aa|up_9|NZ_CP044305.1_381599_382961_+	PRK08044, PRK08044, allantoinase AllB	NA|434aa|up_8|NZ_CP044305.1_383017_384319_+	PRK11412, PRK11412, uracil/xanthine transporter	NA|382aa|up_7|NZ_CP044305.1_384340_385486_+	PRK09932, PRK09932, glycerate 3-kinase	NA|262aa|up_6|NZ_CP044305.1_385713_386499_-	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|412aa|up_5|NZ_CP044305.1_386509_387745_-	TIGR03176, AllC, allantoate amidohydrolase	NA|350aa|up_4|NZ_CP044305.1_387766_388816_-	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|556aa|up_3|NZ_CP044305.1_389131_390799_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|420aa|up_2|NZ_CP044305.1_390808_392068_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|272aa|up_1|NZ_CP044305.1_392078_392894_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|298aa|up_0|NZ_CP044305.1_392890_393784_+	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|356aa|down_0|NZ_CP044305.1_393978_395046_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|170aa|down_1|NZ_CP044305.1_395042_395552_-	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|241aa|down_2|NZ_CP044305.1_395669_396392_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|165aa|down_3|NZ_CP044305.1_396394_396889_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|462aa|down_4|NZ_CP044305.1_397062_398448_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|174aa|down_5|NZ_CP044305.1_398483_399005_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|71aa|down_6|NZ_CP044305.1_399112_399325_-	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|289aa|down_7|NZ_CP044305.1_399326_400193_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|868aa|down_8|NZ_CP044305.1_402924_405528_+	PRK15198, PRK15198, outer membrane usher protein FimD	NA|172aa|down_9|NZ_CP044305.1_406555_407071_+	PRK09934, PRK09934, fimbriae assembly protein
GCF_009762475.1_ASM976247v1	NZ_CP044305	Escherichia coli strain C27A chromosome, complete genome	2	533764-533934	2	CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	Orphan	GAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCG	55	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	NA,NA	NA|242aa|up_9|NZ_CP044305.1_523050_523776_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|225aa|up_8|NZ_CP044305.1_523775_524450_-	PRK15107, PRK15107, glutamate/aspartate ABC transporter permease GltK	NA|247aa|up_7|NZ_CP044305.1_524449_525190_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|303aa|up_6|NZ_CP044305.1_525359_526268_-	PRK10797, PRK10797, glutamate and aspartate transporter subunit; Provisional	NA|513aa|up_5|NZ_CP044305.1_526664_528203_-	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|293aa|up_4|NZ_CP044305.1_528227_529106_-	PRK15094, PRK15094, magnesium/cobalt transporter CorC	NA|156aa|up_3|NZ_CP044305.1_529195_529663_-	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|360aa|up_2|NZ_CP044305.1_529659_530739_-	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|475aa|up_1|NZ_CP044305.1_530852_532277_-	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|392aa|up_0|NZ_CP044305.1_532422_533598_+	PRK08020, ubiF, 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed	NA|555aa|down_0|NZ_CP044305.1_534837_536502_-	PRK09431, asnB, asparagine synthetase B; Provisional	NA|251aa|down_1|NZ_CP044305.1_536898_537651_-	PRK10444, PRK10444, HAD-IIA family hydrolase	NA|407aa|down_2|NZ_CP044305.1_537698_538919_-	pfam00480, ROK, ROK family	NA|383aa|down_3|NZ_CP044305.1_538927_540076_-	PRK11170, nagA, N-acetylglucosamine-6-phosphate deacetylase; Provisional	NA|267aa|down_4|NZ_CP044305.1_540135_540936_-	TIGR00502, Glucosamine-6-phosphate_deaminase, glucosamine-6-phosphate isomerase	NA|649aa|down_5|NZ_CP044305.1_541268_543215_+	PRK10255, PRK10255, PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional	NA|555aa|down_6|NZ_CP044305.1_543417_545082_+	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional	NA|469aa|down_7|NZ_CP044305.1_545667_547074_+	pfam03573, OprD, outer membrane porin, OprD family	NA|109aa|down_8|NZ_CP044305.1_547123_547450_+	pfam13982, YbfN, YbfN-like lipoprotein	NA|149aa|down_9|NZ_CP044305.1_547533_547980_-	PRK09462, fur, ferric uptake regulator; Provisional
GCF_009762475.1_ASM976247v1	NZ_CP044305	Escherichia coli strain C27A chromosome, complete genome	3	534093-534256	3	CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	Orphan	GAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCG	55	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	NA,NA	NA|242aa|up_9|NZ_CP044305.1_523050_523776_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|225aa|up_8|NZ_CP044305.1_523775_524450_-	PRK15107, PRK15107, glutamate/aspartate ABC transporter permease GltK	NA|247aa|up_7|NZ_CP044305.1_524449_525190_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|303aa|up_6|NZ_CP044305.1_525359_526268_-	PRK10797, PRK10797, glutamate and aspartate transporter subunit; Provisional	NA|513aa|up_5|NZ_CP044305.1_526664_528203_-	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|293aa|up_4|NZ_CP044305.1_528227_529106_-	PRK15094, PRK15094, magnesium/cobalt transporter CorC	NA|156aa|up_3|NZ_CP044305.1_529195_529663_-	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|360aa|up_2|NZ_CP044305.1_529659_530739_-	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|475aa|up_1|NZ_CP044305.1_530852_532277_-	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|392aa|up_0|NZ_CP044305.1_532422_533598_+	PRK08020, ubiF, 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed	NA|555aa|down_0|NZ_CP044305.1_534837_536502_-	PRK09431, asnB, asparagine synthetase B; Provisional	NA|251aa|down_1|NZ_CP044305.1_536898_537651_-	PRK10444, PRK10444, HAD-IIA family hydrolase	NA|407aa|down_2|NZ_CP044305.1_537698_538919_-	pfam00480, ROK, ROK family	NA|383aa|down_3|NZ_CP044305.1_538927_540076_-	PRK11170, nagA, N-acetylglucosamine-6-phosphate deacetylase; Provisional	NA|267aa|down_4|NZ_CP044305.1_540135_540936_-	TIGR00502, Glucosamine-6-phosphate_deaminase, glucosamine-6-phosphate isomerase	NA|649aa|down_5|NZ_CP044305.1_541268_543215_+	PRK10255, PRK10255, PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional	NA|555aa|down_6|NZ_CP044305.1_543417_545082_+	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional	NA|469aa|down_7|NZ_CP044305.1_545667_547074_+	pfam03573, OprD, outer membrane porin, OprD family	NA|109aa|down_8|NZ_CP044305.1_547123_547450_+	pfam13982, YbfN, YbfN-like lipoprotein	NA|149aa|down_9|NZ_CP044305.1_547533_547980_-	PRK09462, fur, ferric uptake regulator; Provisional
GCF_009762475.1_ASM976247v1	NZ_CP044305	Escherichia coli strain C27A chromosome, complete genome	4	2168791-2168917	4	CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	Orphan	TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	NA,NA	NA|221aa|up_9|NZ_CP044305.1_2145123_2145786_+	PRK09920, PRK09920, acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; Provisional	NA|217aa|up_8|NZ_CP044305.1_2145785_2146436_+	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit	NA|441aa|up_7|NZ_CP044305.1_2146432_2147755_+	pfam02667, SCFA_trans, Short chain fatty acid transporter	NA|550aa|up_6|NZ_CP044305.1_2149761_2151411_-	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|1465aa|up_5|NZ_CP044305.1_2151411_2155806_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|188aa|up_4|NZ_CP044305.1_2155949_2156513_-	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_3|NZ_CP044305.1_2158375_2161003_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_2|NZ_CP044305.1_2161149_2161872_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|1251aa|up_1|NZ_CP044305.1_2161999_2165752_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|762aa|up_0|NZ_CP044305.1_2166454_2168740_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|NZ_CP044305.1_2168973_2170104_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|NZ_CP044305.1_2170103_2170358_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|NZ_CP044305.1_2170411_2171062_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|359aa|down_3|NZ_CP044305.1_2174010_2175087_-	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|453aa|down_4|NZ_CP044305.1_2175091_2176450_-	PRK11273, glpT, glycerol-3-phosphate transporter	NA|543aa|down_5|NZ_CP044305.1_2176722_2178351_+	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|420aa|down_6|NZ_CP044305.1_2178340_2179600_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|397aa|down_7|NZ_CP044305.1_2179596_2180787_+	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|300aa|down_8|NZ_CP044305.1_2180979_2181879_+	PRK09956, PRK09956, ISNCY family transposase	NA|62aa|down_9|NZ_CP044305.1_2181891_2182077_+	PRK09956, PRK09956, ISNCY family transposase
GCF_009762475.1_ASM976247v1	NZ_CP044305	Escherichia coli strain C27A chromosome, complete genome	5	2659578-2660279	5,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	11,11,8	11	TypeI-E	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	NA,NA	NA|254aa|up_9|NZ_CP044305.1_2651389_2652151_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP044305.1_2652131_2653181_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP044305.1_2653177_2653657_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP044305.1_2653656_2654367_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP044305.1_2654385_2654697_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP044305.1_2654890_2655214_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP044305.1_2655263_2655869_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP044305.1_2655868_2657296_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP044305.1_2657297_2658206_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP044305.1_2658457_2659495_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|95aa|down_0|NZ_CP044305.1_2660384_2660669_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|NZ_CP044305.1_2660670_2661588_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|200aa|down_2|NZ_CP044305.1_2661603_2662203_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|225aa|down_3|NZ_CP044305.1_2662189_2662864_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|364aa|down_4|NZ_CP044305.1_2662866_2663958_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|161aa|down_5|NZ_CP044305.1_2663970_2664453_-	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|495aa|down_6|NZ_CP044305.1_2664445_2665930_-	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cas3|889aa|down_7|NZ_CP044305.1_2666367_2669034_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|600aa|down_8|NZ_CP044305.1_2671672_2673472_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|122aa|down_9|NZ_CP044305.1_2673787_2674153_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)
GCF_009762475.1_ASM976247v1	NZ_CP044305	Escherichia coli strain C27A chromosome, complete genome	6	2685584-2685977	2,6,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	Unclear	GGTTTATCCCCGCTGGCGCGGGGAAC,GGTTTATCCCCGCTGGCGCGGGGAACAC,GGTTTATCCCCGCTGGCGCGGGGAACAC	26,28,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Unclear	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	NA,NA|47aa|down_1|NZ_CP044305.1_2687115_2687256_+	NA|424aa|up_9|NZ_CP044305.1_2674230_2675502_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP044305.1_2675492_2675753_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP044305.1_2675769_2676345_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP044305.1_2676492_2677353_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP044305.1_2677349_2678129_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP044305.1_2678106_2679444_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP044305.1_2679537_2680992_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP044305.1_2681061_2681847_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP044305.1_2682165_2683443_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP044305.1_2683469_2684948_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP044305.1_2686305_2686977_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_CP044305.1_2687115_2687256_+	NA	NA|291aa|down_2|NZ_CP044305.1_2687269_2688142_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_3|NZ_CP044305.1_2688201_2689500_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_4|NZ_CP044305.1_2689587_2691225_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_5|NZ_CP044305.1_2691452_2692244_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_6|NZ_CP044305.1_2692314_2692650_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_7|NZ_CP044305.1_2692649_2692898_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_8|NZ_CP044305.1_2692975_2695210_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_9|NZ_CP044305.1_2695257_2696559_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
GCF_009762475.1_ASM976247v1	NZ_CP044305	Escherichia coli strain C27A chromosome, complete genome	7	4355922-4356069	7	CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	Orphan	CGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	NA,NA|124aa|down_5|NZ_CP044305.1_4364617_4364989_-	NA|132aa|up_9|NZ_CP044305.1_4343853_4344249_-	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|238aa|up_8|NZ_CP044305.1_4344379_4345093_-	PRK12742, PRK12742, SDR family oxidoreductase	NA|198aa|up_7|NZ_CP044305.1_4345163_4345757_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|151aa|up_6|NZ_CP044305.1_4345901_4346354_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|335aa|up_5|NZ_CP044305.1_4348885_4349890_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|NZ_CP044305.1_4350051_4350468_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|NZ_CP044305.1_4350513_4351017_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_2|NZ_CP044305.1_4351201_4352398_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|NZ_CP044305.1_4352453_4355309_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|NZ_CP044305.1_4355308_4355752_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|NZ_CP044305.1_4356105_4357617_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|NZ_CP044305.1_4357883_4358984_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|NZ_CP044305.1_4358983_4360066_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|340aa|down_3|NZ_CP044305.1_4361845_4362865_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|428aa|down_4|NZ_CP044305.1_4363308_4364592_+	PRK09692, PRK09692, integrase; Provisional	NA|124aa|down_5|NZ_CP044305.1_4364617_4364989_-	NA	NA|384aa|down_6|NZ_CP044305.1_4368730_4369882_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|666aa|down_7|NZ_CP044305.1_4370938_4372936_+	PRK09928, PRK09928, choline transport protein BetT; Provisional	NA|426aa|down_8|NZ_CP044305.1_4372998_4374276_+	pfam10011, DUF2254, Predicted membrane protein (DUF2254)	NA|219aa|down_9|NZ_CP044305.1_4374523_4375180_+	pfam16925, TetR_C_13, Bacterial transcriptional repressor C-terminal
GCF_009762475.1_ASM976247v1	NZ_CP044305	Escherichia coli strain C27A chromosome, complete genome	8	4439624-4439772	8	CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	Orphan	GGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCATGCCTACA	48	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,csa3	NA|76aa|up_1|NZ_CP044305.1_4438487_4438715_-,NA	NA|79aa|up_9|NZ_CP044305.1_4431761_4431998_+	pfam07256, DUF1435, Protein of unknown function (DUF1435)	NA|344aa|up_8|NZ_CP044305.1_4432423_4433455_-	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA|138aa|up_7|NZ_CP044305.1_4433557_4433971_+	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated	NA|149aa|up_6|NZ_CP044305.1_4433939_4434386_+	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional	NA|226aa|up_5|NZ_CP044305.1_4434400_4435078_+	PRK09449, PRK09449, dUMP phosphatase; Provisional	NA|530aa|up_4|NZ_CP044305.1_4435168_4436758_+	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|202aa|up_3|NZ_CP044305.1_4437150_4437756_+	PRK10568, PRK10568, molecular chaperone OsmY	NA|54aa|up_2|NZ_CP044305.1_4437882_4438044_+	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|76aa|up_1|NZ_CP044305.1_4438487_4438715_-	NA	NA|261aa|up_0|NZ_CP044305.1_4438810_4439593_+	PRK11449, PRK11449, metal-dependent hydrolase	NA|288aa|down_0|NZ_CP044305.1_4440007_4440871_-	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family	NA|517aa|down_1|NZ_CP044305.1_4440842_4442393_-	PRK10977, PRK10977, hypothetical protein; Provisional	NA|260aa|down_2|NZ_CP044305.1_4442651_4443431_+	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional	NA|441aa|down_3|NZ_CP044305.1_4443597_4444920_+	PRK05820, deoA, thymidine phosphorylase; Reviewed	NA|394aa|down_4|NZ_CP044305.1_4444971_4446153_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|423aa|down_5|NZ_CP044305.1_4446906_4448175_+	PRK09775, PRK09775, type II toxin-antitoxin system HipA family toxin YjjJ	NA|339aa|down_6|NZ_CP044305.1_4448175_4449192_-	PRK03822, lplA, lipoate-protein ligase A; Provisional	NA|215aa|down_7|NZ_CP044305.1_4449219_4449864_-	PRK11246, PRK11246, YtjB family periplasmic protein	NA|323aa|down_8|NZ_CP044305.1_4449969_4450938_+	PRK11133, serB, phosphoserine phosphatase; Provisional	NA|461aa|down_9|NZ_CP044305.1_4450986_4452369_+	TIGR00416, DNA_repair_protein_RadA_homolog, DNA repair protein RadA
