The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046787	Vibrio parahaemolyticus strain 2013V-1174 chromosome 1, complete sequence	3369685	1077377	1084079	3369685		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005483011.1|1077377_1078517_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
WP_024703710.1|1078534_1079785_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.9	9.5e-99
WP_005482986.1|1079912_1080362_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_031829244.1|1080369_1081494_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.6	4.0e-48
WP_005483039.1|1081506_1082160_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.5	1.6e-33
WP_005496254.1|1082329_1083439_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	1.5e-63
WP_005440184.1|1083608_1084079_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
>prophage 2
NZ_CP046787	Vibrio parahaemolyticus strain 2013V-1174 chromosome 1, complete sequence	3369685	1154822	1227993	3369685	tRNA,head,plate,tail	Vibrio_phage(89.58%)	93	NA	NA
WP_005481362.1|1154822_1155296_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_005496155.1|1155352_1156468_-	23S rRNA pseudouridine(2604) synthase RluF	NA	NA	NA	NA	NA
WP_005481355.1|1156567_1157149_-	DNA endonuclease SmrA	NA	NA	NA	NA	NA
WP_005489851.1|1157280_1157421_-	DUF3149 domain-containing protein	NA	NA	NA	NA	NA
WP_025579334.1|1157926_1158799_-	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_011105712.1|1159204_1159312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031782098.1|1159359_1162011_+	family 20 glycosylhydrolase	NA	NA	NA	NA	NA
WP_005453980.1|1162447_1163140_+	porin	NA	NA	NA	NA	NA
WP_025632338.1|1163204_1163654_-	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_031782191.1|1163675_1166411_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	36.5	4.8e-103
WP_079749952.1|1166678_1166822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029830711.1|1166886_1168008_+	chitoporin	NA	NA	NA	NA	NA
WP_074534723.1|1168133_1168727_+	DUF2057 domain-containing protein	NA	NA	NA	NA	NA
WP_005482241.1|1168905_1170330_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011105715.1|1170750_1170870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029839625.1|1170967_1171927_+	OmpA family protein	NA	NA	NA	NA	NA
WP_100550210.1|1172058_1172136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017448769.1|1172169_1172751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005496141.1|1173201_1174335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005382013.1|1174505_1175144_+	membrane protein	NA	NA	NA	NA	NA
WP_005453982.1|1175153_1175585_+	flagellar assembly lipoprotein FlgP	NA	NA	NA	NA	NA
WP_005454011.1|1175697_1176123_-	molecular chaperone	NA	NA	NA	NA	NA
WP_005453996.1|1176149_1176467_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_005486752.1|1176594_1177341_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_005462297.1|1177417_1178344_+	chemotaxis protein CheV	NA	Q56AR1	Bacillus_thuringiensis_phage	32.6	8.7e-33
WP_005462295.1|1178355_1179183_+	protein-glutamate O-methyltransferase	NA	NA	NA	NA	NA
WP_005462294.1|1179495_1179891_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_005462293.1|1179896_1180310_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_005462292.1|1180327_1181035_+	flagellar hook assembly protein FlgD	NA	NA	NA	NA	NA
WP_005462291.1|1181066_1182380_+	flagellar hook protein FlgE	NA	NA	NA	NA	NA
WP_077672902.1|1182468_1182555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005462290.1|1182673_1183423_+	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_005382032.1|1183441_1184230_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_005462288.1|1184260_1185040_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_005454020.1|1185084_1186176_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_025510600.1|1186192_1187119_+	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	36.6	2.7e-18
WP_031829246.1|1187280_1189221_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_005482245.1|1189234_1190428_+	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_101892229.1|1190506_1190611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005462278.1|1190863_1192018_+	flagellin	NA	NA	NA	NA	NA
WP_158132099.1|1193792_1195679_-	hypothetical protein	NA	M4M9L1	Vibrio_phage	68.5	2.2e-22
WP_158132101.1|1195699_1196287_-	DUF2313 domain-containing protein	NA	M4M9M8	Vibrio_phage	79.7	1.7e-90
WP_158132103.1|1196271_1197339_-|plate	phage baseplate protein	plate	M4MHE1	Vibrio_phage	83.1	1.8e-170
WP_126609510.1|1197328_1197781_-	hypothetical protein	NA	M4MB61	Vibrio_phage	81.9	8.0e-64
WP_158132106.1|1197783_1198389_-|plate	phage baseplate assembly protein V	plate	A0A2I7S9F6	Vibrio_phage	84.8	6.4e-93
WP_158132108.1|1198389_1199487_-|tail	phage tail protein	tail	A0A2I7S9G1	Vibrio_phage	81.0	1.8e-170
WP_158132110.1|1199479_1200799_-	multidrug DMT transporter permease	NA	A0A2I7S9E8	Vibrio_phage	67.6	2.3e-167
WP_155483492.1|1200810_1202487_-	tape measure protein	NA	A0A2I7S9D9	Vibrio_phage	66.5	4.4e-192
WP_050926347.1|1202603_1202975_-	hypothetical protein	NA	A0A2I7S9E0	Vibrio_phage	71.5	1.5e-44
WP_158132112.1|1202974_1203328_-|tail	phage tail protein	tail	A0A2I7S9D5	Vibrio_phage	72.6	6.5e-45
WP_158132114.1|1203343_1204822_-|tail	phage tail protein	tail	M1Q565	Vibrio_phage	88.0	1.1e-252
WP_158132117.1|1204824_1205127_-	DUF2635 domain-containing protein	NA	A0A2I7S9K4	Vibrio_phage	51.7	2.4e-08
WP_158132119.1|1205354_1205945_-	hypothetical protein	NA	A0A2I7S9D4	Vibrio_phage	76.0	1.3e-85
WP_140268632.1|1205941_1206484_-	phage virion morphogenesis protein	NA	A0A2I7S9D7	Vibrio_phage	79.9	2.1e-79
WP_062853632.1|1206483_1206918_-	DUF1320 domain-containing protein	NA	A0A2I7S9E9	Vibrio_phage	88.9	1.1e-67
WP_158132121.1|1206936_1207521_-	hypothetical protein	NA	M4M9M3	Vibrio_phage	48.6	5.9e-19
WP_065870383.1|1207548_1208088_-	hypothetical protein	NA	M1Q569	Vibrio_phage	63.6	3.6e-55
WP_158132123.1|1208090_1208348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062853633.1|1208426_1209326_-|head	phage head protein	head	A0A2I7S9D0	Vibrio_phage	79.9	5.2e-139
WP_158132125.1|1209325_1210303_-	peptidase	NA	M1Q578	Vibrio_phage	63.1	5.6e-115
WP_158132127.1|1210604_1211384_-	hypothetical protein	NA	A0A2I7S9F9	Vibrio_phage	80.9	3.9e-127
WP_158132129.1|1211376_1212939_-	DUF935 family protein	NA	M4M9P3	Vibrio_phage	78.2	9.3e-237
WP_069537613.1|1212935_1214498_-	hypothetical protein	NA	M4MHG0	Vibrio_phage	77.5	2.4e-232
WP_062853638.1|1214618_1214810_-	hypothetical protein	NA	M4MB75	Vibrio_phage	57.6	6.0e-13
WP_158132131.1|1214809_1215376_-	DUF3486 family protein	NA	A0A2I7S9D1	Vibrio_phage	68.1	4.0e-65
WP_065870376.1|1215385_1215679_-	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	83.3	1.5e-39
WP_136677190.1|1215687_1215993_-	DUF2730 family protein	NA	M4M9P7	Vibrio_phage	42.3	2.1e-12
WP_062853642.1|1215992_1216208_-	TraR/DksA family transcriptional regulator	NA	M4MHG5	Vibrio_phage	68.6	6.1e-22
WP_086371288.1|1216207_1216804_-	hypothetical protein	NA	M4MB79	Vibrio_phage	55.7	4.1e-44
WP_078557802.1|1216788_1217061_-	hypothetical protein	NA	A0A2I7S9C2	Vibrio_phage	56.5	1.1e-20
WP_140268653.1|1217060_1217627_-	peptidoglycan-binding protein	NA	A0A2I7S9B9	Vibrio_phage	72.6	1.1e-73
WP_065870374.1|1217713_1218115_-	transcriptional regulator	NA	M4MHG9	Vibrio_phage	77.9	2.3e-54
WP_158132133.1|1218183_1218660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158132135.1|1218652_1219168_-	DUF1018 domain-containing protein	NA	A0A2I7S9B8	Vibrio_phage	68.6	6.5e-62
WP_062853648.1|1219171_1219351_-	hypothetical protein	NA	A0A2I7RZD1	Vibrio_phage	69.5	2.2e-17
WP_062853649.1|1219359_1219596_-	hypothetical protein	NA	M4M9N5	Vibrio_phage	57.7	1.8e-19
WP_158132137.1|1219684_1219885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158132139.1|1219884_1220418_-	hypothetical protein	NA	A0A2P9JZH6	Alteromonadaceae_phage	43.4	1.9e-24
WP_158132147.1|1220414_1220687_-	DUF3850 domain-containing protein	NA	A0A059T7N3	Listeria_phage	53.2	1.9e-12
WP_158132149.1|1220683_1221250_-	DNA methyltransferase	NA	U3PDF3	Vibrio_phage	64.8	4.0e-65
WP_158132151.1|1221246_1221474_-	hypothetical protein	NA	M4MCS5	Vibrio_phage	68.6	1.2e-20
WP_065870369.1|1221466_1221685_-	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_062853654.1|1221677_1221950_-	hypothetical protein	NA	M1PJ71	Vibrio_phage	63.6	1.7e-24
WP_158132153.1|1221962_1222580_-	DUF3164 family protein	NA	M4MHH7	Vibrio_phage	79.9	3.8e-85
WP_158132155.1|1222569_1222764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158132157.1|1222773_1223097_-	hypothetical protein	NA	A0A2I7S9B1	Vibrio_phage	48.6	8.6e-20
WP_158132159.1|1223089_1223464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153993905.1|1223472_1223625_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065870364.1|1223628_1223868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065870363.1|1223876_1224824_-	AAA family ATPase	NA	M4M9P4	Vibrio_phage	86.3	1.4e-150
WP_158132169.1|1224859_1226854_-	DDE endonuclease	NA	A0A2I7S9A8	Vibrio_phage	77.4	2.4e-306
WP_078557818.1|1226860_1227085_-	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	85.1	1.2e-28
WP_158132171.1|1227258_1227993_+	helix-turn-helix domain-containing protein	NA	A0A2I7S9A5	Vibrio_phage	78.5	4.5e-109
>prophage 3
NZ_CP046787	Vibrio parahaemolyticus strain 2013V-1174 chromosome 1, complete sequence	3369685	3124881	3142289	3369685	tRNA	uncultured_Mediterranean_phage(20.0%)	14	NA	NA
WP_005455546.1|3124881_3127464_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	1.0e-78
WP_005455548.1|3127606_3128074_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_005478550.1|3128197_3129241_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	8.1e-112
WP_029839426.1|3129441_3129924_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.7	1.3e-27
WP_005478546.1|3130008_3132570_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.7	1.3e-33
WP_029840169.1|3133719_3134643_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_005455562.1|3134657_3135284_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_025575295.1|3135283_3136060_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.8	1.3e-66
WP_005478539.1|3136059_3137103_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005455572.1|3137149_3137626_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_005455574.1|3137643_3138348_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	22.9	3.4e-05
WP_029840165.1|3138349_3138631_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005455579.1|3139268_3140570_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_005455581.1|3140648_3142289_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	4.2e-155
>prophage 1
NZ_CP046788	Vibrio parahaemolyticus strain 2013V-1174 chromosome 2, complete sequence	1794017	1294656	1302903	1794017	coat	Vibrio_phage(85.71%)	9	NA	NA
WP_029850291.1|1294656_1295025_-	hypothetical protein	NA	R9TE55	Vibrio_phage	71.1	3.1e-42
WP_025505236.1|1295224_1295497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031781773.1|1295496_1297527_+	replication endonuclease	NA	A0A0F6YPA7	Vibrio_phage	53.5	5.9e-199
WP_012841822.1|1297610_1297916_+	hypothetical protein	NA	Q2PZB5	Vibrio_virus	51.0	8.1e-20
WP_021448020.1|1298186_1298450_+|coat	phage major coat, Gp8 family protein	coat	R9TI50	Vibrio_phage	40.3	6.3e-05
WP_031829312.1|1298520_1300101_+	chemotaxis protein	NA	NA	NA	NA	NA
WP_012841818.1|1300100_1300460_+|coat	minor coat protein	coat	R9TIT8	Vibrio_phage	45.6	4.1e-23
WP_031781681.1|1300459_1301533_+	hypothetical protein	NA	O80263	Vibrio_phage	62.8	6.0e-126
WP_031781680.1|1301550_1302903_+	type II secretory pathway protein	NA	R9TEZ5	Vibrio_phage	59.8	1.0e-122
