assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009797025.1_ASM979702v1	NZ_CP047027	Cellulophaga sp. L1A9 chromosome, complete genome	1	377419-377591	1	CRISPRCasFinder	no		RT,WYL,DEDDh,cas3	Orphan	TGATAATGATGGTATTCCAGATACT	25	0	0	NA	NA	NA	2	2	Orphan	RT,WYL,DEDDh,cas3	NA,NA|121aa|down_3|NZ_CP047027.1_396339_396702_+	NA|364aa|up_9|NZ_CP047027.1_361342_362434_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|143aa|up_8|NZ_CP047027.1_362687_363116_-	pfam18347, DUF5606, Domain of unknown function (DUF5606)	NA|197aa|up_7|NZ_CP047027.1_363172_363763_-	PRK00150, def, peptide deformylase; Reviewed	NA|137aa|up_6|NZ_CP047027.1_363767_364178_-	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|272aa|up_5|NZ_CP047027.1_364280_365096_+	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional	NA|230aa|up_4|NZ_CP047027.1_365279_365969_+	cd02523, PC_cytidylyltransferase, Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline	NA|609aa|up_3|NZ_CP047027.1_365968_367795_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|257aa|up_2|NZ_CP047027.1_367791_368562_-	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|187aa|up_1|NZ_CP047027.1_368733_369294_+	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|476aa|up_0|NZ_CP047027.1_369295_370723_+	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|311aa|down_0|NZ_CP047027.1_385728_386661_+	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF	NA|2613aa|down_1|NZ_CP047027.1_387088_394927_+	pfam17517, IgGFc_binding, IgGFc binding protein	NA|311aa|down_2|NZ_CP047027.1_394950_395883_+	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF	NA|121aa|down_3|NZ_CP047027.1_396339_396702_+	NA	NA|2804aa|down_4|NZ_CP047027.1_396881_405293_+	pfam17517, IgGFc_binding, IgGFc binding protein	NA|311aa|down_5|NZ_CP047027.1_405334_406267_+	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF	NA|648aa|down_6|NZ_CP047027.1_406279_408223_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|345aa|down_7|NZ_CP047027.1_408364_409399_+	pfam02628, COX15-CtaA, Cytochrome oxidase assembly protein	NA|165aa|down_8|NZ_CP047027.1_409426_409921_+	pfam07929, PRiA4_ORF3, Plasmid pRiA4b ORF-3-like protein	NA|353aa|down_9|NZ_CP047027.1_409987_411046_+	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein
GCF_009797025.1_ASM979702v1	NZ_CP047027	Cellulophaga sp. L1A9 chromosome, complete genome	2	377815-377914	2	CRISPRCasFinder	no		RT,WYL,DEDDh,cas3	Orphan	TGATAATGATGGTATTCCAGATACT	25	0	0	NA	NA	NA	1	1	Orphan	RT,WYL,DEDDh,cas3	NA,NA|121aa|down_3|NZ_CP047027.1_396339_396702_+	NA|364aa|up_9|NZ_CP047027.1_361342_362434_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|143aa|up_8|NZ_CP047027.1_362687_363116_-	pfam18347, DUF5606, Domain of unknown function (DUF5606)	NA|197aa|up_7|NZ_CP047027.1_363172_363763_-	PRK00150, def, peptide deformylase; Reviewed	NA|137aa|up_6|NZ_CP047027.1_363767_364178_-	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|272aa|up_5|NZ_CP047027.1_364280_365096_+	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional	NA|230aa|up_4|NZ_CP047027.1_365279_365969_+	cd02523, PC_cytidylyltransferase, Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline	NA|609aa|up_3|NZ_CP047027.1_365968_367795_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|257aa|up_2|NZ_CP047027.1_367791_368562_-	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|187aa|up_1|NZ_CP047027.1_368733_369294_+	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|476aa|up_0|NZ_CP047027.1_369295_370723_+	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|311aa|down_0|NZ_CP047027.1_385728_386661_+	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF	NA|2613aa|down_1|NZ_CP047027.1_387088_394927_+	pfam17517, IgGFc_binding, IgGFc binding protein	NA|311aa|down_2|NZ_CP047027.1_394950_395883_+	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF	NA|121aa|down_3|NZ_CP047027.1_396339_396702_+	NA	NA|2804aa|down_4|NZ_CP047027.1_396881_405293_+	pfam17517, IgGFc_binding, IgGFc binding protein	NA|311aa|down_5|NZ_CP047027.1_405334_406267_+	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF	NA|648aa|down_6|NZ_CP047027.1_406279_408223_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|345aa|down_7|NZ_CP047027.1_408364_409399_+	pfam02628, COX15-CtaA, Cytochrome oxidase assembly protein	NA|165aa|down_8|NZ_CP047027.1_409426_409921_+	pfam07929, PRiA4_ORF3, Plasmid pRiA4b ORF-3-like protein	NA|353aa|down_9|NZ_CP047027.1_409987_411046_+	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein
GCF_009797025.1_ASM979702v1	NZ_CP047027	Cellulophaga sp. L1A9 chromosome, complete genome	3	479756-479856	3	CRISPRCasFinder	no		RT,WYL,DEDDh,cas3	Orphan	CTACCACCACAAGAGCTACACGT	23	0	0	NA	NA	NA	1	1	Orphan	RT,WYL,DEDDh,cas3	NA|229aa|up_4|NZ_CP047027.1_473904_474591_+,NA	NA|213aa|up_9|NZ_CP047027.1_466759_467398_+	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine	NA|64aa|up_8|NZ_CP047027.1_467516_467708_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|311aa|up_7|NZ_CP047027.1_468234_469167_-	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases	NA|462aa|up_6|NZ_CP047027.1_471452_472838_-	cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma glutamate carboxypeptidase	NA|293aa|up_5|NZ_CP047027.1_472840_473719_-	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family	NA|229aa|up_4|NZ_CP047027.1_473904_474591_+	NA	NA|388aa|up_3|NZ_CP047027.1_474594_475758_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|295aa|up_2|NZ_CP047027.1_475797_476682_-	COG3264, COG3264, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|445aa|up_1|NZ_CP047027.1_476685_478020_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|312aa|up_0|NZ_CP047027.1_478012_478948_-	cd03269, ABC_putative_ATPase, ATP-binding cassette domain of an uncharacterized transporter	NA|184aa|down_0|NZ_CP047027.1_480345_480897_-	cd00446, GrpE, nucleotide exchange factor GrpE	NA|305aa|down_1|NZ_CP047027.1_481065_481980_-	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	NA|221aa|down_2|NZ_CP047027.1_482072_482735_-	COG4121, COG4121, Uncharacterized conserved protein [Function unknown]	NA|168aa|down_3|NZ_CP047027.1_482736_483240_-	pfam16267, DUF4920, Domain of unknown function (DUF4920)	NA|356aa|down_4|NZ_CP047027.1_483346_484414_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|129aa|down_5|NZ_CP047027.1_484453_484840_-	cd11530, NTP-PPase_DR2231_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|124aa|down_6|NZ_CP047027.1_485372_485744_+	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|113aa|down_7|NZ_CP047027.1_486074_486413_+	smart00938, P-II, Nitrogen regulatory protein P-II	NA|439aa|down_8|NZ_CP047027.1_486439_487756_+	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|344aa|down_9|NZ_CP047027.1_487877_488909_+	pfam07642, BBP2, Putative beta-barrel porin-2, OmpL-like
GCF_009797025.1_ASM979702v1	NZ_CP047027	Cellulophaga sp. L1A9 chromosome, complete genome	4	1887265-1887364	4	CRISPRCasFinder	no		RT,WYL,DEDDh,cas3	Orphan	TTGAAATTGTACTTGCTATGATCTTGAAAAATCAA	35	0	0	NA	NA	NA	1	1	Orphan	RT,WYL,DEDDh,cas3	NA|73aa|up_7|NZ_CP047027.1_1880632_1880851_-,NA|237aa|up_4|NZ_CP047027.1_1882755_1883466_+,NA|279aa|up_3|NZ_CP047027.1_1883623_1884460_+,NA|125aa|up_1|NZ_CP047027.1_1885923_1886298_+,NA|215aa|up_0|NZ_CP047027.1_1886363_1887008_-,NA	NA|132aa|up_9|NZ_CP047027.1_1879240_1879636_-	cd17036, T3SC_YbjN-like_1, T110839 is structurally similar to type III secretion system chaperones and YbjN family proteins	NA|248aa|up_8|NZ_CP047027.1_1879792_1880536_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|73aa|up_7|NZ_CP047027.1_1880632_1880851_-	NA	NA|296aa|up_6|NZ_CP047027.1_1881156_1882044_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|153aa|up_5|NZ_CP047027.1_1882051_1882510_+	sd00006, TPR, Tetratricopeptide repeat	NA|237aa|up_4|NZ_CP047027.1_1882755_1883466_+	NA	NA|279aa|up_3|NZ_CP047027.1_1883623_1884460_+	NA	NA|402aa|up_2|NZ_CP047027.1_1884533_1885739_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|125aa|up_1|NZ_CP047027.1_1885923_1886298_+	NA	NA|215aa|up_0|NZ_CP047027.1_1886363_1887008_-	NA	NA|148aa|down_0|NZ_CP047027.1_1890361_1890805_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|307aa|down_1|NZ_CP047027.1_1890808_1891729_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|144aa|down_2|NZ_CP047027.1_1891737_1892169_-	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase	NA|730aa|down_3|NZ_CP047027.1_1892777_1894967_+	TIGR02063, Ribonuclease_R, ribonuclease R	NA|227aa|down_4|NZ_CP047027.1_1895032_1895713_+	pfam10988, DUF2807, Putative auto-transporter adhesin, head GIN domain	NA|226aa|down_5|NZ_CP047027.1_1895719_1896397_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|194aa|down_6|NZ_CP047027.1_1896494_1897076_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|316aa|down_7|NZ_CP047027.1_1897143_1898091_+	TIGR00745, Putative_2-dehydropantoate_2-reductase, 2-dehydropantoate 2-reductase	NA|203aa|down_8|NZ_CP047027.1_1898255_1898864_+	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|119aa|down_9|NZ_CP047027.1_1899484_1899841_-	pfam02152, FolB, Dihydroneopterin aldolase
GCF_009797025.1_ASM979702v1	NZ_CP047027	Cellulophaga sp. L1A9 chromosome, complete genome	5	2735677-2735826	5	CRISPRCasFinder	no		RT,WYL,DEDDh,cas3	Orphan	CTTGCGTATATTTTGTGAGACTTTTTATTTTCAAAGCGGAGCTTT	45	0	0	NA	NA	NA	1	1	Orphan	RT,WYL,DEDDh,cas3	NA|240aa|up_4|NZ_CP047027.1_2730364_2731084_+,NA|247aa|down_0|NZ_CP047027.1_2735960_2736701_+,NA|318aa|down_1|NZ_CP047027.1_2736708_2737662_-,NA|123aa|down_2|NZ_CP047027.1_2737814_2738183_+,NA|168aa|down_3|NZ_CP047027.1_2738318_2738822_+,NA|138aa|down_6|NZ_CP047027.1_2742058_2742472_-	NA|407aa|up_9|NZ_CP047027.1_2724147_2725368_+	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|445aa|up_8|NZ_CP047027.1_2725369_2726704_+	COG0771, MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]	NA|401aa|up_7|NZ_CP047027.1_2726710_2727913_+	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW	NA|364aa|up_6|NZ_CP047027.1_2727899_2728991_+	PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional	NA|451aa|up_5|NZ_CP047027.1_2729022_2730375_+	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|240aa|up_4|NZ_CP047027.1_2730364_2731084_+	NA	NA|449aa|up_3|NZ_CP047027.1_2731087_2732434_+	TIGR01174, Cell_division_protein_FtsA, cell division protein FtsA	NA|647aa|up_2|NZ_CP047027.1_2732475_2734416_+	PRK09330, PRK09330, cell division protein FtsZ; Validated	NA|150aa|up_1|NZ_CP047027.1_2734503_2734953_+	pfam09424, YqeY, Yqey-like protein	NA|83aa|up_0|NZ_CP047027.1_2735027_2735276_+	cd10449, GIY-YIG_SLX1_like, Catalytic GIY-YIG domain of yeast structure-specific endonuclease subunit SLX1 and its homologs	NA|247aa|down_0|NZ_CP047027.1_2735960_2736701_+	NA	NA|318aa|down_1|NZ_CP047027.1_2736708_2737662_-	NA	NA|123aa|down_2|NZ_CP047027.1_2737814_2738183_+	NA	NA|168aa|down_3|NZ_CP047027.1_2738318_2738822_+	NA	NA|797aa|down_4|NZ_CP047027.1_2739033_2741424_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|202aa|down_5|NZ_CP047027.1_2741430_2742036_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|138aa|down_6|NZ_CP047027.1_2742058_2742472_-	NA	NA|215aa|down_7|NZ_CP047027.1_2742610_2743255_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|659aa|down_8|NZ_CP047027.1_2743244_2745221_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|321aa|down_9|NZ_CP047027.1_2745342_2746305_-	TIGR04018, thioredoxin_reductase, putative bacillithiol system oxidoreductase, YpdA family
GCF_009797025.1_ASM979702v1	NZ_CP047027	Cellulophaga sp. L1A9 chromosome, complete genome	6	4036862-4037056	6	CRISPRCasFinder	no		RT,WYL,DEDDh,cas3	Orphan	TACTTCTTGTCGCAGGACTTCTATAAT	27	0	0	NA	NA	NA	2	2	Orphan	RT,WYL,DEDDh,cas3	NA|373aa|up_5|NZ_CP047027.1_4028496_4029615_-,NA|166aa|down_7|NZ_CP047027.1_4046791_4047289_+	NA|109aa|up_9|NZ_CP047027.1_4023372_4023699_-	PRK14623, PRK14623, YbaB/EbfC family nucleoid-associated protein	NA|713aa|up_8|NZ_CP047027.1_4023762_4025901_+	COG1770, PtrB, Protease II [Amino acid transport and metabolism]	NA|347aa|up_7|NZ_CP047027.1_4025990_4027031_+	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|420aa|up_6|NZ_CP047027.1_4027154_4028414_+	cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)	NA|373aa|up_5|NZ_CP047027.1_4028496_4029615_-	NA	NA|354aa|up_4|NZ_CP047027.1_4029716_4030778_-	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation	NA|89aa|up_3|NZ_CP047027.1_4030890_4031157_+	pfam16118, DUF4834, Domain of unknown function (DUF4834)	NA|811aa|up_2|NZ_CP047027.1_4031257_4033690_+	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|424aa|up_1|NZ_CP047027.1_4033689_4034961_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|486aa|up_0|NZ_CP047027.1_4034960_4036418_+	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|926aa|down_0|NZ_CP047027.1_4037930_4040708_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|194aa|down_1|NZ_CP047027.1_4040967_4041549_+	PRK12513, PRK12513, RNA polymerase sigma factor; Provisional	NA|194aa|down_2|NZ_CP047027.1_4042381_4042963_+	PRK12513, PRK12513, RNA polymerase sigma factor; Provisional	NA|221aa|down_3|NZ_CP047027.1_4043198_4043861_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|151aa|down_4|NZ_CP047027.1_4043965_4044418_+	PRK09437, bcp, thioredoxin-dependent thiol peroxidase; Reviewed	NA|488aa|down_5|NZ_CP047027.1_4044460_4045924_-	TIGR01527, Nicotinamide-nucleotide_adenylyltransferase, nicotinamide-nucleotide adenylyltransferase	NA|255aa|down_6|NZ_CP047027.1_4046010_4046775_+	PRK02113, PRK02113, MBL fold metallo-hydrolase	NA|166aa|down_7|NZ_CP047027.1_4046791_4047289_+	NA	NA|410aa|down_8|NZ_CP047027.1_4047333_4048562_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|218aa|down_9|NZ_CP047027.1_4048653_4049307_-	COG0400, COG0400, Predicted esterase [General function prediction only]
